Citrus Sinensis ID: 014177
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 429 | ||||||
| 325461580 | 430 | putative astaxanthin synthase [Carica pa | 0.995 | 0.993 | 0.791 | 0.0 | |
| 224106217 | 431 | predicted protein [Populus trichocarpa] | 0.960 | 0.955 | 0.788 | 0.0 | |
| 359479459 | 422 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 1.0 | 0.778 | 0.0 | |
| 255544942 | 422 | conserved hypothetical protein [Ricinus | 0.983 | 1.0 | 0.780 | 0.0 | |
| 449444893 | 416 | PREDICTED: uncharacterized protein LOC10 | 0.913 | 0.942 | 0.809 | 0.0 | |
| 164521187 | 396 | unknown, partial [Nuphar advena] | 0.909 | 0.984 | 0.794 | 0.0 | |
| 356543827 | 429 | PREDICTED: uncharacterized protein LOC10 | 0.916 | 0.916 | 0.784 | 0.0 | |
| 357474051 | 420 | Saccharopine dehydrogenase family protei | 0.913 | 0.933 | 0.775 | 0.0 | |
| 18403077 | 428 | Saccharopine dehydrogenase [Arabidopsis | 0.990 | 0.992 | 0.736 | 1e-180 | |
| 297852744 | 428 | hypothetical protein ARALYDRAFT_474174 [ | 0.997 | 1.0 | 0.731 | 1e-180 |
| >gi|325461580|gb|ADZ14892.1| putative astaxanthin synthase [Carica papaya] | Back alignment and taxonomy information |
|---|
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/432 (79%), Positives = 376/432 (87%), Gaps = 5/432 (1%)
Query: 1 MARALPRLNSTATAIMASATSATKETVLDGAH---FQMKNRNARVLVLGGTGRVGGSTAV 57
MA AL L S T A+++S+TKE D H K RN+RVL+LGGTGRVGGSTA+
Sbjct: 1 MAGALLYLRSPVTT--AASSSSTKEKEFDNVHKIRLPDKTRNSRVLILGGTGRVGGSTAI 58
Query: 58 ALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117
ALS LCP+L++++G RNREKG AM + LGKNSEFAEVNI SL AL + DLVVH AG
Sbjct: 59 ALSNLCPELRVIIGGRNREKGDAMAAKLGKNSEFAEVNIDEVESLKTALSEADLVVHTAG 118
Query: 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177
PFQQA KCTVLEAAIETKTAYIDVCDDT Y+ RAKSFKDRAIAANIPAITTGGIYPGVSN
Sbjct: 119 PFQQAEKCTVLEAAIETKTAYIDVCDDTSYAFRAKSFKDRAIAANIPAITTGGIYPGVSN 178
Query: 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITL 237
VMAAELVRVAR+ESKGEPERLRF YYTAGTGGAGPTIL TSFLLLGEEVVAYNKGEEI L
Sbjct: 179 VMAAELVRVARSESKGEPERLRFHYYTAGTGGAGPTILVTSFLLLGEEVVAYNKGEEIKL 238
Query: 238 EPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQR 297
+PYSGML++DFGKGIG++DV+LLNLPEVRSA +VLGVPTVSARFGTAPFFWNWGM M
Sbjct: 239 KPYSGMLNIDFGKGIGKRDVYLLNLPEVRSAYKVLGVPTVSARFGTAPFFWNWGMTAMTN 298
Query: 298 LFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSV 357
P E+LRDR KVQ+LVQLFDP+VRA DGIAGERVSMRVDLECTDGR TVGIFSHRRLSV
Sbjct: 299 FLPMEFLRDRDKVQRLVQLFDPLVRAVDGIAGERVSMRVDLECTDGRRTVGIFSHRRLSV 358
Query: 358 SVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVE 417
SVGTA AAF LA+LEG+TQPGVWFPEEPEGIA+EAR+ LL+RA+QGTINFVMNK PWMVE
Sbjct: 359 SVGTATAAFALAILEGSTQPGVWFPEEPEGIAVEARQTLLERAAQGTINFVMNKPPWMVE 418
Query: 418 TEPKELGLGIYI 429
T+PKELGLGIY+
Sbjct: 419 TDPKELGLGIYV 430
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Source: Carica papaya Species: Carica papaya Genus: Carica Family: Caricaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224106217|ref|XP_002314088.1| predicted protein [Populus trichocarpa] gi|222850496|gb|EEE88043.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/417 (78%), Positives = 368/417 (88%), Gaps = 5/417 (1%)
Query: 18 SATSATKETVLDGAHFQM-----KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS 72
S + KE D ++ + K RN+ VLVLGGTGRVGGSTA ALSK CPDL+IV+G
Sbjct: 15 SVKACVKECKHDNSNSNVVQLPEKTRNSSVLVLGGTGRVGGSTATALSKFCPDLRIVIGG 74
Query: 73 RNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAI 132
RNREKGAAMV LG+NSEF EVNI N SL AL+DVDLVVHAAGPFQQA KCTVLEAAI
Sbjct: 75 RNREKGAAMVGQLGRNSEFTEVNIENVDSLGAALKDVDLVVHAAGPFQQAAKCTVLEAAI 134
Query: 133 ETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESK 192
ETKTAY+DVCDDT Y+ RAKSFKD+A+AANIPAITTGGIYPGVSNVMAAELVR A+ ESK
Sbjct: 135 ETKTAYVDVCDDTSYALRAKSFKDKALAANIPAITTGGIYPGVSNVMAAELVRAAKTESK 194
Query: 193 GEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGI 252
G+PERLRF YYTAG+GGAGPTILATSFLLLGEEVVAYNKGE+I L+PYSGML++DFGKGI
Sbjct: 195 GKPERLRFYYYTAGSGGAGPTILATSFLLLGEEVVAYNKGEKIKLKPYSGMLNIDFGKGI 254
Query: 253 GRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQ 312
G++DV+LLNLPEVRSA +VLG+PTVSARFGTAPFFWNWGM M L E+L+DR+KVQQ
Sbjct: 255 GKRDVYLLNLPEVRSAHDVLGIPTVSARFGTAPFFWNWGMSAMTNLLSPEFLKDRTKVQQ 314
Query: 313 LVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSVSVGTAIAAFVLAVLE 372
LVQLFDP+VRA DGIAGERVSMRVDLECTDGRNT+G+FSHR+LSVSVG A AAF LAVLE
Sbjct: 315 LVQLFDPLVRAVDGIAGERVSMRVDLECTDGRNTLGLFSHRKLSVSVGNATAAFALAVLE 374
Query: 373 GATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVETEPKELGLGIYI 429
G+TQPGVWFPEEPEGIAIEARE+LL RA++GTINF+MNK PWMVET+PKELGLGIY+
Sbjct: 375 GSTQPGVWFPEEPEGIAIEARELLLNRATEGTINFIMNKPPWMVETDPKELGLGIYV 431
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359479459|ref|XP_002274681.2| PREDICTED: uncharacterized protein LOC100251769 [Vitis vinifera] gi|297734956|emb|CBI17190.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/429 (77%), Positives = 374/429 (87%), Gaps = 7/429 (1%)
Query: 1 MARALPRLNSTATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALS 60
MA A LNST ++AS H K N RVLVLGGTGRVGGSTA+ALS
Sbjct: 1 MAGASLHLNSTT--VLASLQENQPRV-----HLPEKTANRRVLVLGGTGRVGGSTAIALS 53
Query: 61 KLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQ 120
KLCPDL+I VG RNREKGAAM++ LG+NSEFAEVNI N SL AL DVDLV+H AGPFQ
Sbjct: 54 KLCPDLRITVGGRNREKGAAMLAKLGENSEFAEVNIDNVKSLEAALNDVDLVIHTAGPFQ 113
Query: 121 QAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMA 180
QA KCTVLEAAIETKTAY+DVCDDT Y+ RAKS ++A++AN+PAITTGGIYPGVSNVMA
Sbjct: 114 QAEKCTVLEAAIETKTAYVDVCDDTTYAWRAKSLLEKALSANVPAITTGGIYPGVSNVMA 173
Query: 181 AELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITLEPY 240
AELVRVAR+ES+G+PERLRF YYTAGTGGAGPTILATSFLLLGEEVVAYNKGE+I L+PY
Sbjct: 174 AELVRVARSESQGKPERLRFYYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEKIKLKPY 233
Query: 241 SGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQRLFP 300
SGML++DFGKGIG++DV+LL+LPEVRSA E+LGVPTVSARFGTAPFFWNWGM M L P
Sbjct: 234 SGMLNIDFGKGIGKRDVYLLHLPEVRSAHEILGVPTVSARFGTAPFFWNWGMEAMTNLLP 293
Query: 301 AEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSVSVG 360
E+LRDRSKVQ+LVQLFDP+VRA DGIAGERVSMRVDLEC+DGRNTVG+FSHRRLSVSVG
Sbjct: 294 VEFLRDRSKVQELVQLFDPIVRAMDGIAGERVSMRVDLECSDGRNTVGLFSHRRLSVSVG 353
Query: 361 TAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVETEP 420
A AAF LAVLEG+TQPGVWFPEEPEGIAI+AR++LLKRA+QGTINF+MNK PWMVET+P
Sbjct: 354 FATAAFALAVLEGSTQPGVWFPEEPEGIAIDARDILLKRAAQGTINFIMNKPPWMVETDP 413
Query: 421 KELGLGIYI 429
KELGLGIY+
Sbjct: 414 KELGLGIYV 422
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255544942|ref|XP_002513532.1| conserved hypothetical protein [Ricinus communis] gi|223547440|gb|EEF48935.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/429 (78%), Positives = 373/429 (86%), Gaps = 7/429 (1%)
Query: 1 MARALPRLNSTATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALS 60
MAR L +L ST+ +MA A T L K RN+RVLVLGGTGRVGGSTA+ALS
Sbjct: 1 MARVLFQLKSTS--VMACAKLDTNRVEL-----PEKTRNSRVLVLGGTGRVGGSTAIALS 53
Query: 61 KLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQ 120
KLCPDL+IV+ RNREKGAA+V LGKNS+FA+V+I N SL AL DVD+VVHAAGPFQ
Sbjct: 54 KLCPDLRIVIAGRNREKGAALVDKLGKNSDFAQVDINNVESLEAALSDVDVVVHAAGPFQ 113
Query: 121 QAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMA 180
Q KC+VLEAAI TKTAYIDVCDDT Y+ RAKSFKDRA+AANIPAITT GIYPGVSN+MA
Sbjct: 114 QTEKCSVLEAAIATKTAYIDVCDDTSYALRAKSFKDRALAANIPAITTAGIYPGVSNIMA 173
Query: 181 AELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITLEPY 240
AELVR AR ESKG PERLRF YYTAGTGGAGPTILATSFLLLGEEVVAYNKGE I L+PY
Sbjct: 174 AELVRAARMESKGNPERLRFHYYTAGTGGAGPTILATSFLLLGEEVVAYNKGERIKLKPY 233
Query: 241 SGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQRLFP 300
SGML++DFGKGI ++DV+LLNLPEV+SA E+LG+PTVSARFGT+PFFWNWGM M LFP
Sbjct: 234 SGMLNIDFGKGIRKRDVYLLNLPEVQSAHEILGIPTVSARFGTSPFFWNWGMEIMTNLFP 293
Query: 301 AEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSVSVG 360
E LRDRSKVQQLVQLFDP+VRA DGIAGERVSMR+DLEC+DGRNTVGIFSH+RLSVSVG
Sbjct: 294 PEVLRDRSKVQQLVQLFDPLVRALDGIAGERVSMRIDLECSDGRNTVGIFSHKRLSVSVG 353
Query: 361 TAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVETEP 420
A AAFVLA+LEG+T+PGVWFPEEPEGIA EAREVLL+RA++GTINFVMNK PWMVETEP
Sbjct: 354 NATAAFVLAILEGSTKPGVWFPEEPEGIATEAREVLLQRAAEGTINFVMNKPPWMVETEP 413
Query: 421 KELGLGIYI 429
KE+GLGIY+
Sbjct: 414 KEVGLGIYV 422
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444893|ref|XP_004140208.1| PREDICTED: uncharacterized protein LOC101209190 [Cucumis sativus] gi|449482525|ref|XP_004156312.1| PREDICTED: uncharacterized LOC101209190 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/394 (80%), Positives = 352/394 (89%), Gaps = 2/394 (0%)
Query: 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY 97
RN+RVLVLGGTGRVG STA+ALS+ CPDLQIV+G RNR KG AMV TLG+NS F EV++
Sbjct: 23 RNSRVLVLGGTGRVGASTAIALSQFCPDLQIVIGGRNRAKGEAMVGTLGRNSRFVEVDVD 82
Query: 98 NEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETK--TAYIDVCDDTIYSQRAKSFK 155
N L AL DVDLVVH AGPFQQ KCTVLEA+I TK TAY+DVCDDT YSQ+AKSF+
Sbjct: 83 NVDMLEAALSDVDLVVHTAGPFQQTEKCTVLEASINTKERTAYVDVCDDTEYSQKAKSFR 142
Query: 156 DRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTIL 215
++AI ANIPAITT GIYPGVSNVMA+ELVR R+ESKGEPERLRF YYTAGTGGAGPTIL
Sbjct: 143 NKAIDANIPAITTAGIYPGVSNVMASELVRAVRDESKGEPERLRFYYYTAGTGGAGPTIL 202
Query: 216 ATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVP 275
ATSFLLLGEEVVAYNKGE++ L+PYSGML++DFGKGIG++DVFLLNLPEVR+A E+LGVP
Sbjct: 203 ATSFLLLGEEVVAYNKGEQLKLKPYSGMLNIDFGKGIGKRDVFLLNLPEVRTAHEILGVP 262
Query: 276 TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMR 335
TVSARFGTAPFFWNWGMV + L P EY RDRSKVQ LVQLFDP VRAFDG+AGERVSMR
Sbjct: 263 TVSARFGTAPFFWNWGMVALTNLLPLEYFRDRSKVQNLVQLFDPFVRAFDGLAGERVSMR 322
Query: 336 VDLECTDGRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREV 395
VDLEC++GRNTVGIFSHRRLS SVG + AAF LAVLEG+TQPGVWFPEEPEGIAIEAREV
Sbjct: 323 VDLECSNGRNTVGIFSHRRLSQSVGYSTAAFALAVLEGSTQPGVWFPEEPEGIAIEAREV 382
Query: 396 LLKRASQGTINFVMNKAPWMVETEPKELGLGIYI 429
LL+RA+QGTINFVMNK PWMVETEPKELGLGIY+
Sbjct: 383 LLRRAAQGTINFVMNKPPWMVETEPKELGLGIYV 416
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|164521187|gb|ABY60455.1| unknown, partial [Nuphar advena] | Back alignment and taxonomy information |
|---|
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/390 (79%), Positives = 350/390 (89%)
Query: 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE 99
+RVL+LGGTGRVGGSTAVALSKLCPDL+I V RNRE+GAA+VS LG+NSEF EVNI N
Sbjct: 7 SRVLILGGTGRVGGSTAVALSKLCPDLRIAVAGRNRERGAALVSKLGENSEFVEVNINNI 66
Query: 100 GSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAI 159
+L+ AL+DVDLVVHAAGPFQQ KC VLEAAI TKTAY+DVCDDT Y+ RAKS +A+
Sbjct: 67 DALVEALKDVDLVVHAAGPFQQGGKCNVLEAAISTKTAYLDVCDDTTYAYRAKSVHQKAV 126
Query: 160 AANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSF 219
AN+ AITTGGIYPGVSNVMAAELVR+ARNE EPERLRF YYTAG+GGAGPTILATSF
Sbjct: 127 DANVSAITTGGIYPGVSNVMAAELVRLARNEGTYEPERLRFYYYTAGSGGAGPTILATSF 186
Query: 220 LLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSA 279
LLLGE+VVAYNKG++I L PYSGML++DFGKGIG++DV+LLNLPEVRS EVLGVPTVSA
Sbjct: 187 LLLGEDVVAYNKGQKIKLRPYSGMLNIDFGKGIGKRDVYLLNLPEVRSTHEVLGVPTVSA 246
Query: 280 RFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLE 339
RFGTAPFFWNWGM+ M L PAE LRDR KVQQLV LFDP+VRAFDGIAGERVSMRVDLE
Sbjct: 247 RFGTAPFFWNWGMLAMANLVPAEILRDRGKVQQLVTLFDPLVRAFDGIAGERVSMRVDLE 306
Query: 340 CTDGRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKR 399
C++GR+TVGI+SH+RLS SVGTA AAFV+A+LEG+TQPGVWFPEEPEGI++EAR+ LL+R
Sbjct: 307 CSNGRSTVGIYSHKRLSESVGTATAAFVMAILEGSTQPGVWFPEEPEGISVEARKALLER 366
Query: 400 ASQGTINFVMNKAPWMVETEPKELGLGIYI 429
AS+GTINFVMNK WMVETEPKELGLGIY+
Sbjct: 367 ASKGTINFVMNKPAWMVETEPKELGLGIYV 396
|
Source: Nuphar advena Species: Nuphar advena Genus: Nuphar Family: Nymphaeaceae Order: Nymphaeales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543827|ref|XP_003540361.1| PREDICTED: uncharacterized protein LOC100781532 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/394 (78%), Positives = 349/394 (88%), Gaps = 1/394 (0%)
Query: 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVN 95
K RN+R+LVLGGTGRVGGSTA+ALS LCPDLQI+V RNREKG + + LG NSEFA V+
Sbjct: 37 KIRNSRILVLGGTGRVGGSTAIALSNLCPDLQILVAGRNREKGEVLTAKLGGNSEFARVD 96
Query: 96 IYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFK 155
I + SL AL++VDLVVHAAGPFQQA +C+VLEAAI T+TAY+DVCDDT Y+ RAKSF
Sbjct: 97 IDDVNSLETALKNVDLVVHAAGPFQQAERCSVLEAAINTQTAYLDVCDDTSYAWRAKSFM 156
Query: 156 DRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTIL 215
+RA+ AN+PAITTGGIYPG+SNVMAAELVR A NES+ +PERLRF YYTAGTGGAGPTIL
Sbjct: 157 NRALDANVPAITTGGIYPGISNVMAAELVRAA-NESEDKPERLRFYYYTAGTGGAGPTIL 215
Query: 216 ATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVP 275
ATSFLLLGEEVVAYNKGE+I + PYSGML+VDFGKGIG++DV+LLNLPEV SA E+LGVP
Sbjct: 216 ATSFLLLGEEVVAYNKGEKIRMRPYSGMLNVDFGKGIGKRDVYLLNLPEVSSAHEILGVP 275
Query: 276 TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMR 335
+VSARFGTAPFFWNWGM M +L P+E+LRDR+KVQ LVQLFDPVVRA DGIAGERVSMR
Sbjct: 276 SVSARFGTAPFFWNWGMEAMTKLLPSEFLRDRNKVQSLVQLFDPVVRAVDGIAGERVSMR 335
Query: 336 VDLECTDGRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREV 395
VDLEC GRNTVGIFSHRRLSVSVG A AAF LA+LEG+TQPGVWFPEE +GI IEAREV
Sbjct: 336 VDLECASGRNTVGIFSHRRLSVSVGIATAAFALAILEGSTQPGVWFPEEAQGIPIEAREV 395
Query: 396 LLKRASQGTINFVMNKAPWMVETEPKELGLGIYI 429
LLKRASQGT NF+MN++PWMVET PKE GLGIY+
Sbjct: 396 LLKRASQGTFNFIMNRSPWMVETNPKEFGLGIYL 429
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357474051|ref|XP_003607310.1| Saccharopine dehydrogenase family protein expressed [Medicago truncatula] gi|355508365|gb|AES89507.1| Saccharopine dehydrogenase family protein expressed [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/396 (77%), Positives = 347/396 (87%), Gaps = 4/396 (1%)
Query: 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVN 95
K RN++VLVLGGTGRVGGSTA ALS CPDL+I+V RNREKG A+V+ LG NS FA V+
Sbjct: 27 KIRNSKVLVLGGTGRVGGSTATALSNFCPDLRIIVAGRNREKGEALVAKLGGNSGFARVD 86
Query: 96 IYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFK 155
I + SL AL+ VDLV+HAAGPFQQ KC+VLEAAI TKTAYIDVCDDT YSQRAKSF
Sbjct: 87 IDDVNSLETALKGVDLVIHAAGPFQQTEKCSVLEAAINTKTAYIDVCDDTDYSQRAKSFM 146
Query: 156 DRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGE--PERLRFSYYTAGTGGAGPT 213
+A+AANIPAITT GIYPGV +MAAELVR A +E++ E PE+LRF YYTAGTGGAGPT
Sbjct: 147 SKALAANIPAITTAGIYPGV--IMAAELVRAAESETESEDKPEKLRFYYYTAGTGGAGPT 204
Query: 214 ILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG 273
ILATSFLLLGEEVVAYNKGE+I L PYSGML +DFGKGI ++DV+LLNLPEVRSA E+LG
Sbjct: 205 ILATSFLLLGEEVVAYNKGEKIKLNPYSGMLKIDFGKGINKRDVYLLNLPEVRSAHEILG 264
Query: 274 VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVS 333
VP+VSARFGTAPFFWNWGM M +LFPAEYLRDRSKVQ+LV+LFDPVVRA DG AGERVS
Sbjct: 265 VPSVSARFGTAPFFWNWGMEAMTKLFPAEYLRDRSKVQRLVELFDPVVRAVDGFAGERVS 324
Query: 334 MRVDLECTDGRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAR 393
MRVDLEC+ GR+T+GIFSH+RLSVSVG + AAF LAVLEG+TQPGVWFPEEP+GI IEAR
Sbjct: 325 MRVDLECSSGRHTIGIFSHKRLSVSVGISTAAFALAVLEGSTQPGVWFPEEPQGIPIEAR 384
Query: 394 EVLLKRASQGTINFVMNKAPWMVETEPKELGLGIYI 429
EVLLKRASQGTINF +NK+PWM+ET PKE+GLGIY+
Sbjct: 385 EVLLKRASQGTINFALNKSPWMIETNPKEVGLGIYV 420
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18403077|ref|NP_564570.1| Saccharopine dehydrogenase [Arabidopsis thaliana] gi|14517416|gb|AAK62598.1| At1g50450/F11F12_20 [Arabidopsis thaliana] gi|20453277|gb|AAM19877.1| At1g50450/F11F12_20 [Arabidopsis thaliana] gi|332194431|gb|AEE32552.1| Saccharopine dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 318/432 (73%), Positives = 366/432 (84%), Gaps = 7/432 (1%)
Query: 1 MARALPRLNSTATAIMASATSATKETVLDGA---HFQMKNRNARVLVLGGTGRVGGSTAV 57
M RAL AT AS ++ET DG F +RN RVLVLGGTGRVGGSTA
Sbjct: 1 MTRALLLQPYRATVRAAS----SRETQYDGVPEVKFSDPSRNYRVLVLGGTGRVGGSTAT 56
Query: 58 ALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117
ALSKLCP+L+IVVG RNREKG AMV+ LG+NSEF++V+I + L +LRDVDLVVHAAG
Sbjct: 57 ALSKLCPELKIVVGGRNREKGEAMVAKLGENSEFSQVDINDAKMLETSLRDVDLVVHAAG 116
Query: 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177
PFQQAP+CTVLEAAI+TKTAY+DVCDDT Y+ RAKS + AIAANIPA+TT GIYPGVSN
Sbjct: 117 PFQQAPRCTVLEAAIKTKTAYLDVCDDTSYAFRAKSLEAEAIAANIPALTTAGIYPGVSN 176
Query: 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITL 237
VMAAE+V AR+E KG+PE+LRFSYYTAGTGGAGPTILATSFLLLGEEV AY +GE++ L
Sbjct: 177 VMAAEMVAAARSEDKGKPEKLRFSYYTAGTGGAGPTILATSFLLLGEEVTAYKQGEKVKL 236
Query: 238 EPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQR 297
PYSGM++VDFGKGI ++DV+LLNLPEVRS EVLGVPTV ARFGTAPFFWNWGM M +
Sbjct: 237 RPYSGMITVDFGKGIRKRDVYLLNLPEVRSTHEVLGVPTVVARFGTAPFFWNWGMEIMTK 296
Query: 298 LFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSV 357
L P+E LRDR+KVQQ+V+LFDPVVRA DG AGERVSMRVDLEC+DGR TVG+FSH++LSV
Sbjct: 297 LLPSEVLRDRTKVQQMVELFDPVVRAMDGFAGERVSMRVDLECSDGRTTVGLFSHKKLSV 356
Query: 358 SVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVE 417
SVG + AAFV A+LEG+TQPGVWFPEEP+GIA+EAREVLLKRASQGT NF++NK PWMVE
Sbjct: 357 SVGVSTAAFVAAMLEGSTQPGVWFPEEPQGIAVEAREVLLKRASQGTFNFILNKPPWMVE 416
Query: 418 TEPKELGLGIYI 429
TEPKE+ LGIY+
Sbjct: 417 TEPKEVVLGIYV 428
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297852744|ref|XP_002894253.1| hypothetical protein ARALYDRAFT_474174 [Arabidopsis lyrata subsp. lyrata] gi|297340095|gb|EFH70512.1| hypothetical protein ARALYDRAFT_474174 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 314/429 (73%), Positives = 364/429 (84%), Gaps = 1/429 (0%)
Query: 1 MARALPRLNSTATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALS 60
MARAL L ++A+++S TK + RN RVLVLGGTGRVGGSTA ALS
Sbjct: 1 MARAL-LLQPYRATVLAASSSETKYDGVPEVKLSDPTRNYRVLVLGGTGRVGGSTATALS 59
Query: 61 KLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQ 120
KLCP L+IVVG RNREKG AMV+ LG+NSEFA+V+I + L +LRDVDLVVHAAGPFQ
Sbjct: 60 KLCPKLKIVVGGRNREKGEAMVAKLGENSEFAQVDINDAKMLETSLRDVDLVVHAAGPFQ 119
Query: 121 QAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMA 180
QAP+CTVLEAAI+TKTAY+DVCDDT Y+ RAKS + AIAANIPA+TT GIYPGVSNVMA
Sbjct: 120 QAPRCTVLEAAIKTKTAYLDVCDDTSYAFRAKSLEAEAIAANIPALTTAGIYPGVSNVMA 179
Query: 181 AELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITLEPY 240
AE+V A +E KG+PE+LRFSYYTAGTGGAGPTILATSFLLLGEEV AY +GE++ L PY
Sbjct: 180 AEMVAAAISEDKGKPEKLRFSYYTAGTGGAGPTILATSFLLLGEEVTAYKQGEKVKLRPY 239
Query: 241 SGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQRLFP 300
SGM++VDFGKGI ++DV+LLNLPEVRS EVLGVPTV ARFGTAPFFWNWGM M +L P
Sbjct: 240 SGMITVDFGKGIRKRDVYLLNLPEVRSTHEVLGVPTVVARFGTAPFFWNWGMEIMTKLLP 299
Query: 301 AEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSVSVG 360
+E LRDR+KVQQ+V+LFDPVVRA D AGERVSMRVDLEC+DGR TVG+FSH++LSVSVG
Sbjct: 300 SEVLRDRTKVQQMVELFDPVVRAMDSFAGERVSMRVDLECSDGRTTVGLFSHKKLSVSVG 359
Query: 361 TAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVETEP 420
+ AAFV+A+LEG+TQPGVWFPEEP+GIA+EAREVLLKRASQGT NF++NK PWMVETEP
Sbjct: 360 VSTAAFVVAMLEGSTQPGVWFPEEPQGIAVEAREVLLKRASQGTFNFILNKPPWMVETEP 419
Query: 421 KELGLGIYI 429
KE+ LGIY+
Sbjct: 420 KEVVLGIYV 428
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 429 | ||||||
| TAIR|locus:2008041 | 428 | AT1G50450 [Arabidopsis thalian | 0.946 | 0.948 | 0.694 | 3.3e-150 | |
| UNIPROTKB|Q4KB25 | 359 | PFL_3454 "Saccharopine dehydro | 0.459 | 0.548 | 0.227 | 6.4e-07 | |
| TIGR_CMR|GSU_2539 | 398 | GSU_2539 "saccharopine dehydro | 0.468 | 0.505 | 0.269 | 1.3e-05 | |
| UNIPROTKB|Q9KRL3 | 414 | VC_1624 "Putative uncharacteri | 0.487 | 0.504 | 0.234 | 0.00066 | |
| TIGR_CMR|VC_1624 | 414 | VC_1624 "conserved hypothetica | 0.487 | 0.504 | 0.234 | 0.00066 |
| TAIR|locus:2008041 AT1G50450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1466 (521.1 bits), Expect = 3.3e-150, P = 3.3e-150
Identities = 284/409 (69%), Positives = 331/409 (80%)
Query: 24 KETVLDGA---HFQMKNRNXXXXXXXXXXXXXXXXXXALSKLCPDLQIVVGSRNREKGAA 80
+ET DG F +RN ALSKLCP+L+IVVG RNREKG A
Sbjct: 20 RETQYDGVPEVKFSDPSRNYRVLVLGGTGRVGGSTATALSKLCPELKIVVGGRNREKGEA 79
Query: 81 MVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID 140
MV+ LG+NSEF++V+I + L +LRDVDLVVHAAGPFQQAP+CTVLEAAI+TKTAY+D
Sbjct: 80 MVAKLGENSEFSQVDINDAKMLETSLRDVDLVVHAAGPFQQAPRCTVLEAAIKTKTAYLD 139
Query: 141 VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRF 200
VCDDT Y+ RAKS + AIAANIPA+TT GIYPGVSNVMAAE+V AR+E KG+PE+LRF
Sbjct: 140 VCDDTSYAFRAKSLEAEAIAANIPALTTAGIYPGVSNVMAAEMVAAARSEDKGKPEKLRF 199
Query: 201 SXXXXXXXXXXPTILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLL 260
S PTILATSFLLLGEEV AY +GE++ L PYSGM++VDFGKGI ++DV+LL
Sbjct: 200 SYYTAGTGGAGPTILATSFLLLGEEVTAYKQGEKVKLRPYSGMITVDFGKGIRKRDVYLL 259
Query: 261 NLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQLVQLFDPV 320
NLPEVRS EVLGVPTV ARFGTAPFFWNWGM M +L P+E LRDR+KVQQ+V+LFDPV
Sbjct: 260 NLPEVRSTHEVLGVPTVVARFGTAPFFWNWGMEIMTKLLPSEVLRDRTKVQQMVELFDPV 319
Query: 321 VRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSVSVGTAIAAFVLAVLEGATQPGVW 380
VRA DG AGERVSMRVDLEC+DGR TVG+FSH++LSVSVG + AAFV A+LEG+TQPGVW
Sbjct: 320 VRAMDGFAGERVSMRVDLECSDGRTTVGLFSHKKLSVSVGVSTAAFVAAMLEGSTQPGVW 379
Query: 381 FPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVETEPKELGLGIYI 429
FPEEP+GIA+EAREVLLKRASQGT NF++NK PWMVETEPKE+ LGIY+
Sbjct: 380 FPEEPQGIAVEAREVLLKRASQGTFNFILNKPPWMVETEPKEVVLGIYV 428
|
|
| UNIPROTKB|Q4KB25 PFL_3454 "Saccharopine dehydrogenase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 142 (55.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 49/215 (22%), Positives = 94/215 (43%)
Query: 66 LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKC 125
L+ V+ RNR+K A+ LG + ++ ++ LL ++ + LV+H AGPF A
Sbjct: 35 LRPVLAGRNRDKVEALARELGLEARVFGLD--DDARLLAQVKGLGLVLHCAGPFS-ATAA 91
Query: 126 TVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS-NVMAAELV 184
++EA + Y+D+ + + A+S +RA AA + I PGV +V+ + V
Sbjct: 92 PMIEACLRASAHYLDITGEIAVFEHAQSLNERARAAGVV------ICPGVGFDVVPTDCV 145
Query: 185 RVARNESKGEPERLRFSXXXXXXXXXXPTILATSFLLLGEEVVAYNKGEEITLEPYSGML 244
A ++ P+ + P TS + + G +++ +
Sbjct: 146 AAALKDAL--PDATHLALGFDSRSSFSPGTAKTSIEGMAQGGKVRRDGRIVSVPLAYRVR 203
Query: 245 SVDFGKGIGRKDVFLLNLP--EVRSAREVLGVPTV 277
+DFG G + + +P ++ +A G+P +
Sbjct: 204 RIDFGAG----EKLSMTIPWGDISTAYHTTGIPNI 234
|
|
| TIGR_CMR|GSU_2539 GSU_2539 "saccharopine dehydrogenase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 62/230 (26%), Positives = 105/230 (45%)
Query: 68 IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVD--LVVHAAGPFQQAPKC 125
I + SR + K A+ + L + A+V+ N L+ ++ LV++ A P+Q
Sbjct: 30 ITLASRTKSKCDAIAAQLNNSIATAQVDADNVPELVALIKKEQPKLVINVALPYQDL--- 86
Query: 126 TVLEAAIETKTAYIDVCD----DTI---YSQRAKSFKDRAIAANIPAITTGGIYPGVSNV 178
T+++A +ET Y+D + DT YS + +++DR +A + A+ G PGV+NV
Sbjct: 87 TIMDACLETGVDYLDTANYEPLDTAKFEYSWQW-AYQDRFKSAGLMALLGSGFDPGVTNV 145
Query: 179 MAAELVRVARNESKGEPERLRFSXXXXXXXXXXPTILATSFL--LLGEEVVA----YNKG 232
A +A + E + + P AT+F + EV A + G
Sbjct: 146 YTA----LAAKKYLDEVQEIDI-IDANAGSHGQP--FATNFNPEINIREVTAPCRHWENG 198
Query: 233 EEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTV-SARF 281
E + P S DF +GIG +++ L E+ S V +PT+ A+F
Sbjct: 199 EFVETPPLSTKQVFDFPEGIGPMNIYRLYHEEMESI--VKHIPTIRKAQF 246
|
|
| UNIPROTKB|Q9KRL3 VC_1624 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 53/226 (23%), Positives = 96/226 (42%)
Query: 77 KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV--DLVVHAAGPFQQAPKCTVLEAAIET 134
KG + K E +VN + SL+ + +V DLV++A P+ ++EA +
Sbjct: 47 KGKNNLKDSSKKLEARQVNADDIESLVKLINEVKPDLVINAGPPWVNV---AIMEACYQA 103
Query: 135 KTAY------IDVCDDTIYSQRAK----SFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184
K +Y +D+C A +F+D+ A I AI + G PGV +V AA
Sbjct: 104 KVSYLDTSVSVDLCSKGQQVPEAYDAQWAFRDKFKQAGITAILSAGFDPGVVSVFAAYAA 163
Query: 185 RVARNESKGEPERLRFSXXXXXXXXXXPTILATSFLLLGEEVVAYNKGEEITLEPYSGML 244
+ +E + L + T+ L + + + ++ GE + ++ ML
Sbjct: 164 KYLFDEID-TIDVLDINAGDHGKKFATNFDPETNLLEIQGDSIYWDAGEWKRVPCHTRML 222
Query: 245 SVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNW 290
DF K G+ V+ ++ E+RS +E + + G + N+
Sbjct: 223 EFDFPK-CGKFKVYSMSHDELRSLKEFIPAKRIEFWMGFGDRYLNY 267
|
|
| TIGR_CMR|VC_1624 VC_1624 "conserved hypothetical protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 53/226 (23%), Positives = 96/226 (42%)
Query: 77 KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV--DLVVHAAGPFQQAPKCTVLEAAIET 134
KG + K E +VN + SL+ + +V DLV++A P+ ++EA +
Sbjct: 47 KGKNNLKDSSKKLEARQVNADDIESLVKLINEVKPDLVINAGPPWVNV---AIMEACYQA 103
Query: 135 KTAY------IDVCDDTIYSQRAK----SFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184
K +Y +D+C A +F+D+ A I AI + G PGV +V AA
Sbjct: 104 KVSYLDTSVSVDLCSKGQQVPEAYDAQWAFRDKFKQAGITAILSAGFDPGVVSVFAAYAA 163
Query: 185 RVARNESKGEPERLRFSXXXXXXXXXXPTILATSFLLLGEEVVAYNKGEEITLEPYSGML 244
+ +E + L + T+ L + + + ++ GE + ++ ML
Sbjct: 164 KYLFDEID-TIDVLDINAGDHGKKFATNFDPETNLLEIQGDSIYWDAGEWKRVPCHTRML 222
Query: 245 SVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNW 290
DF K G+ V+ ++ E+RS +E + + G + N+
Sbjct: 223 EFDFPK-CGKFKVYSMSHDELRSLKEFIPAKRIEFWMGFGDRYLNY 267
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 429 387 0.00093 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 605 (64 KB)
Total size of DFA: 212 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.60u 0.14s 25.74t Elapsed: 00:00:02
Total cpu time: 25.60u 0.14s 25.74t Elapsed: 00:00:02
Start: Fri May 10 05:12:01 2013 End: Fri May 10 05:12:03 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.5.1.44 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.5.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 429 | |||
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 5e-34 | |
| COG1748 | 389 | COG1748, LYS9, Saccharopine dehydrogenase and rela | 2e-27 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 1e-04 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 2e-04 | |
| cd01078 | 194 | cd01078, NAD_bind_H4MPT_DH, NADP binding domain of | 5e-04 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 0.001 | |
| cd01065 | 155 | cd01065, NAD_bind_Shikimate_DH, NAD(P) binding dom | 0.001 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 0.003 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 5e-34
Identities = 83/379 (21%), Positives = 136/379 (35%), Gaps = 54/379 (14%)
Query: 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS-TLGKNSEFAEVNIYNEG 100
VL++G G VG A L++ DL+I V R+ EK A+ + LG V+ N
Sbjct: 1 VLIIGA-GGVGQGVAPLLAR-HGDLEITVADRSLEKAQALAAPKLGLRFIAIAVDADNYE 58
Query: 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIA 160
+L+ L++ DLV++ A PF TVL+A IET Y+D + + ++A
Sbjct: 59 ALVALLKEGDLVINLAPPFLSL---TVLKACIETGVHYVDTS---YLREAQLALHEKAKD 112
Query: 161 ANIPAITTGGIYPGVSNVMAAELV-RVARNESK---------GEPERLRFSYYTAGTGGA 210
A + A+ G PG+ ++ A + +A +K G PE A T
Sbjct: 113 AGVTAVLGCGFDPGLVSLFAKYALDDLADELAKVLSVKIHCGGRPEPKDNPLEFANT--- 169
Query: 211 GPTILATSFLLLGE---EVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRS 267
+ LL E + G+ + + S ++ F GIG + + L +
Sbjct: 170 -----WSPEGLLEELTNPARYWENGKWVEVGWGSHERTIPFPYGIGPGYAYEIYLNRPGT 224
Query: 268 AREVLGVPTVSARFG-TAPFFWNWGMVTMQRLFPAEYLRD------RSKVQQLVQLFDPV 320
V + + V ++ L LR + L L +
Sbjct: 225 LTRVRSWLPEADGVLFGTIRIPGYLTV-IKLLGDLGLLRPTVHYAYIPPLDALKSLLESP 283
Query: 321 VRAFDGIAGERVSMRVDLE--CTDGRNTVGIFSH-----------RRL-SVSVGTAIAAF 366
+V + V++E G G + R + GT
Sbjct: 284 ASLGPEEQD-KVRIGVEVEGIDKLGVLLTGHIYNAYGSGLSIEEGRSAMPYTTGTPAQVA 342
Query: 367 VLAVLEGA-TQPGVWFPEE 384
+ G +PGV PEE
Sbjct: 343 AALLAGGEWAKPGVVEPEE 361
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
| >gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 92/408 (22%), Positives = 151/408 (37%), Gaps = 55/408 (13%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
++LV+G G VG A L++ D ++ + R++EK A + +G E +V+ +
Sbjct: 3 KILVIGA-GGVGSVVAHKLAQN-GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD 60
Query: 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIA 160
+L+ ++D DLV++AA PF T+L+A I+T Y+D Y + + A
Sbjct: 61 ALVALIKDFDLVINAAPPFVDL---TILKACIKTGVDYVDTSY---YEEPPWKLDEEAKK 114
Query: 161 ANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSF- 219
A I A+ G PG++NV+AA + E E E + G G P AT++
Sbjct: 115 AGITAVLGCGFDPGITNVLAAYAAK----ELFDEIESIDIYVGGLGEHGDNPLGYATTWS 170
Query: 220 ---LLLG--EEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGV 274
L + G+ + ++P +F IG DV+ E+RS + +
Sbjct: 171 PEINLREYTRPARYWENGKWVEVDPLEEREVFEFPV-IGYGDVYAFYHDELRSLVKTIPG 229
Query: 275 PTVSARFGT--APFFWNWGMVTMQRL------------------FPAEYLRDRS----KV 310
+ T P + ++ L F L D
Sbjct: 230 VVRTRFEMTFRYPGHLEV-IKALRDLGLLSREPVKVQQEIVPLEFLKAVLPDPLSLAPDY 288
Query: 311 QQLVQLFDPVVRAFDGIAGERVSMRVD-LECTDGRNTVGIFSHRRLSVSVGTAIAAFVLA 369
+ + + V DG D E + I + V AI A +LA
Sbjct: 289 KDVTVIGVEVKGTKDGRDKTVFYNVKDHAEAYSEVGSSAI----SYTTGVPAAIGAELLA 344
Query: 370 VLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVE 417
PGV PEE + L K +G + +VE
Sbjct: 345 E-GEWETPGVVNPEE-----LGPDPFLEKLLIRGLPWRGVENEGGIVE 386
|
Length = 389 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 25/97 (25%), Positives = 36/97 (37%), Gaps = 10/97 (10%)
Query: 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101
+ V+G TG+ G L L Q+ SRN K A + ++++
Sbjct: 1 IAVIGATGKTGRRLVKEL--LARGHQVTALSRNPSKAPA------PGVTPVQKDLFDLAD 52
Query: 102 LLMALRDVDLVVHAAGPFQQAPKCT--VLEAAIETKT 136
L AL VD VV A G +L+AA
Sbjct: 53 LAEALAGVDAVVDAFGARPDDSDGVKHLLDAAARAGV 89
|
Length = 182 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
++ + G TG +GG AL P + V + R + + V+ +
Sbjct: 1 KIAIAGATGTLGGPIVSALLAS-PGFTVTVLT--RPSSTSSNEFQPSGVKVVPVDYASHE 57
Query: 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIE 133
SL+ AL+ VD V+ A G + +++AAI
Sbjct: 58 SLVAALKGVDAVISALGGAAIGDQLKLIDAAIA 90
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 5e-04
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 12/112 (10%)
Query: 9 NSTATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQI 68
N+TA A +A+A A + +VLGGTG VG AV L++ ++
Sbjct: 5 NTTAAAAVAAAGKA-------LELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGA--RV 55
Query: 69 VVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118
V+ R+ E+ +L V ++ + A++ D+V AAG
Sbjct: 56 VLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF-AAGA 106
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSL 102
LV G TG++G + L +V RN EK A E + + + +L
Sbjct: 2 LVTGATGKLGTAVVELLLAK--VASVVALVRNPEKAKA---FAADGVEVRQGDYDDPETL 56
Query: 103 LMALRDVD--LVVHAAGPFQQAPK-CTVLEAA 131
A VD L++ + + + ++AA
Sbjct: 57 ERAFEGVDRLLLISPSDLEDRIQQHKNFIDAA 88
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|133443 cd01065, NAD_bind_Shikimate_DH, NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 38 RNARVLVLG--GTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVN 95
+ +VL+LG G R + A AL++L +IV+ +R EK A+ G+
Sbjct: 18 KGKKVLILGAGGAAR---AVAYALAELGAA-KIVIVNRTLEKAKALAERFGELGI----- 68
Query: 96 IYNEGSLLMALRDVDLVVHA 115
L L + DL+++
Sbjct: 69 AIAYLDLEELLAEADLIINT 88
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DHs, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 155 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGS-RNREKGAAMVSTLGKNS-----EF 91
VLV G TG + L L+ V G+ R+ K A + + L EF
Sbjct: 1 LVLVTGATGFIASHIVEQL------LKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEF 54
Query: 92 AEV-NIYNEGSLLMALRDVDLVVHAAGPF---QQAPKCTVLEAAIE 133
V ++ + AL+ VD V+H A PF + V++ A+E
Sbjct: 55 VIVDDLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVE 100
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 429 | |||
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 100.0 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 100.0 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 99.97 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 99.95 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.78 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 99.77 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.71 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.7 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.68 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.66 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.65 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.64 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.62 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.6 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.55 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.55 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.55 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.55 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.54 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.54 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.54 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.54 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.54 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.53 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.53 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.52 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.51 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.51 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 99.51 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.51 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.5 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.5 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.5 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.49 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.48 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.48 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.48 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.44 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.44 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.43 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.42 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.39 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.38 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.38 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.34 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.32 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.32 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.32 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.31 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.3 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.3 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.29 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.28 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.27 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.25 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.25 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.23 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.21 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.2 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.2 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.19 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.18 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.17 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.16 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.15 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.15 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.15 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.15 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.15 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.14 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.13 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.13 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.13 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.13 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.12 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.12 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.11 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.11 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.11 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.09 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.09 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.09 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.08 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.07 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.07 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.06 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.06 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.06 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.06 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.06 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.06 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.05 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.04 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.04 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.04 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.04 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.03 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.03 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.02 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.02 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.02 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.01 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.99 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.99 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.99 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.99 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.98 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 98.98 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.98 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.98 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.97 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.97 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.97 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.97 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.97 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.96 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.96 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 98.96 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.96 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.96 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.95 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.95 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.95 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.95 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.94 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.94 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 98.94 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.94 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.94 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.93 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.93 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.93 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.93 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.92 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.92 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.92 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.91 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.91 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.9 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 98.9 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.89 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.89 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.89 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.88 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.88 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.86 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.86 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.86 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 98.86 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.85 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.85 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.85 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.84 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.84 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.84 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.84 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.84 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.83 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.83 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.83 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.83 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.83 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.83 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.82 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.82 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 98.82 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.82 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.8 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.8 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.8 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.79 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.79 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.78 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.76 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.76 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.75 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.73 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.73 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.72 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.72 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.7 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.68 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.68 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.68 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.67 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.67 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.66 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.64 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.64 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 98.62 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.61 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.59 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.58 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.58 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.57 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.57 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 98.56 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.56 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.55 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.55 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.54 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.53 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.53 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.53 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 98.52 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.51 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.5 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.47 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.47 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.45 | |
| TIGR01921 | 324 | DAP-DH diaminopimelate dehydrogenase. This model r | 98.45 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.43 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.42 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 98.4 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.4 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 98.38 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 98.32 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 98.31 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.29 | |
| PLN00106 | 323 | malate dehydrogenase | 98.29 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 98.28 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.27 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 98.22 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.21 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.2 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.18 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 98.13 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.11 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 98.09 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.08 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 98.05 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.04 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.99 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.98 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 97.97 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 97.95 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.95 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.92 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.92 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.92 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.9 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.89 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.89 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.88 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.88 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.86 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.86 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.85 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 97.85 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.84 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 97.83 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.82 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.8 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.79 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.79 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.76 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 97.75 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.74 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 97.74 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.73 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.71 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 97.71 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.7 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.7 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.7 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.7 | |
| COG0673 | 342 | MviM Predicted dehydrogenases and related proteins | 97.69 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.69 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.68 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.68 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.67 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 97.66 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.65 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.64 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.63 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.59 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.57 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.57 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.57 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 97.57 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.56 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.55 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.54 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 97.54 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.51 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.5 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.5 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 97.49 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 97.49 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.48 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.48 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.47 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 97.46 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.46 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.46 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.45 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.42 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.41 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.4 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.38 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 97.37 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.36 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 97.36 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.35 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.34 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.33 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 97.32 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 97.31 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 97.3 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.28 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.27 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 97.26 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 97.26 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.26 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.26 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 97.25 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.23 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 97.22 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.22 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.21 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 97.19 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 97.19 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.19 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.15 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.15 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 97.14 | |
| COG1023 | 300 | Gnd Predicted 6-phosphogluconate dehydrogenase [Ca | 97.12 | |
| COG3804 | 350 | Uncharacterized conserved protein related to dihyd | 97.11 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.1 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.09 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.06 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 97.06 | |
| PRK11579 | 346 | putative oxidoreductase; Provisional | 97.05 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.05 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.04 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.04 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 97.04 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 97.03 | |
| PRK07411 | 390 | hypothetical protein; Validated | 97.02 | |
| PLN02696 | 454 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 97.02 | |
| TIGR02130 | 275 | dapB_plant dihydrodipicolinate reductase. This nar | 97.01 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.0 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.99 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.98 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.98 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 96.98 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.98 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.97 | |
| TIGR00243 | 389 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 96.97 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.93 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.93 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.9 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.9 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.89 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.87 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 96.87 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.86 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.86 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.83 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 96.81 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.81 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 96.81 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 96.8 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 96.8 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 96.77 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.76 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.76 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.74 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.71 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.67 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.67 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 96.6 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.56 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 96.56 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.55 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.55 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 96.54 | |
| COG0743 | 385 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 96.54 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 96.52 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 96.52 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.51 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 96.5 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 96.49 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 96.46 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.46 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.45 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.44 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.43 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.43 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.42 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 96.41 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.38 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.37 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.37 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 96.36 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.35 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.35 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.34 | |
| PRK10206 | 344 | putative oxidoreductase; Provisional | 96.32 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 96.3 | |
| PRK06270 | 341 | homoserine dehydrogenase; Provisional | 96.3 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.3 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.3 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.27 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 96.25 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 96.24 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.23 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 96.22 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.22 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.21 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 96.2 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.19 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.18 | |
| TIGR01761 | 343 | thiaz-red thiazolinyl imide reductase. This reduct | 96.17 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.17 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.15 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.15 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.14 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.12 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.12 |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=360.15 Aligned_cols=351 Identities=23% Similarity=0.318 Sum_probs=290.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|++|+|+|+ |+||+.+++.|++++ +.+|+++||+.++++++......+++.+++|+.|.+++.+++++.|+||||+++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~-d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNG-DGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 579999997 999999999999973 389999999999999998776668999999999999999999999999999998
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEE
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERL 198 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i 198 (429)
+.. ..++++|+++|++|+|++...... ..+++.++++|+++++++|++||++|+++.++++. ++++++.+
T Consensus 79 ~~~---~~i~ka~i~~gv~yvDts~~~~~~---~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~----~~~~i~si 148 (389)
T COG1748 79 FVD---LTILKACIKTGVDYVDTSYYEEPP---WKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKE----LFDEIESI 148 (389)
T ss_pred hhh---HHHHHHHHHhCCCEEEcccCCchh---hhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHH----hhccccEE
Confidence 876 799999999999999999776542 46788999999999999999999999999999984 56699999
Q ss_pred EEEeeecCCCCCCcc------HHHHHHHHhCCceEEeeCCeEEEecCCCCCeeeecCCCceeeeEEeecCchhhhhhhhc
Q 014177 199 RFSYYTAGTGGAGPT------ILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVL 272 (429)
Q Consensus 199 ~~~~~~~G~~~~g~~------~~~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~~~fp~~~g~~~~~~~~~~e~~tl~~~~ 272 (429)
+++.+..|.++.++. ...+++.++.+|+.+|+||+|++++|++..+.++||. .|...+|.++|+|+.||.+++
T Consensus 149 ~iy~g~~g~~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~~~~~~~~~~~~-~G~~~~y~~~~~el~sL~~~i 227 (389)
T COG1748 149 DIYVGGLGEHGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDPLEEREVFEFPV-IGYGDVYAFYHDELRSLVKTI 227 (389)
T ss_pred EEEEecCCCCCCCCccceeeecHHHhHHHhcCceEEEeCCEEEEecCcccccccccCC-CCceeEEecCCccHHHHHHhC
Confidence 996544444442222 1234678999999999999999999999999999986 789999999999999999999
Q ss_pred C-CCeEEEEcccChhhhhHHHHHhHhhcchhhccchhh--------hhhhhhcchhhhhhhcccCCcceEEEEEEEe-CC
Q 014177 273 G-VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSK--------VQQLVQLFDPVVRAFDGIAGERVSMRVDLEC-TD 342 (429)
Q Consensus 273 ~-~~~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~g-~d 342 (429)
+ ..+..+++++ +|++|++.++.|..+||++.+++ .+++..++....... ....+.+++.+.++| ||
T Consensus 228 ~~~~~~~~~~t~---r~~g~~~~i~~L~~lGll~~~~v~~~~~i~p~eflk~vl~~~~s~~-~~~~d~t~i~v~v~G~kd 303 (389)
T COG1748 228 PGVVRTRFEMTF---RYPGHLEVIKALRDLGLLSREPVKVQQEIVPLEFLKAVLPDPLSLA-PDYKDVTVIGVEVKGTKD 303 (389)
T ss_pred cccceeeEEeec---CcccHHHHHHHHHHcCCCcccccccccccchHHHHHHhcccccccC-CCcCceEEEEEEEEEEEc
Confidence 7 6677777654 78999999999999999988642 344433332222211 124678999999999 89
Q ss_pred CCceEEeee------------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcchhhh
Q 014177 343 GRNTVGIFS------------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVM 409 (429)
Q Consensus 343 G~~~~~~~~------------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~~~~~ 409 (429)
|+..+++|. .++++.+||.+++++|+++++|+ ..+||++||+++ | ++|++ ..+.
T Consensus 304 G~~~~~~y~~~~~~~~~~~~~~~ais~ttg~pa~~~a~ll~~g~~~~~Gv~~~E~l~--~----~~~~~-------~~~~ 370 (389)
T COG1748 304 GRDKTVFYNVKDHAEAYSEVGSSAISYTTGVPAAIGAELLAEGEWETPGVVNPEELG--P----DPFLE-------KLLI 370 (389)
T ss_pred CeeeEEEecchhhHHHhhccccceeehhccccHHHHHHHHHcCCCCcCcEecHHHhC--C----ChhHH-------HHhh
Confidence 997655444 36689999999999999999999 899999999998 6 77888 1222
Q ss_pred ccCCceeecC
Q 014177 410 NKAPWMVETE 419 (429)
Q Consensus 410 ~~~~~~~~~~ 419 (429)
+++||+.-++
T Consensus 371 ~~l~~~~~~~ 380 (389)
T COG1748 371 RGLPWRGVEN 380 (389)
T ss_pred ccCcchhccc
Confidence 4599987764
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=316.67 Aligned_cols=347 Identities=24% Similarity=0.315 Sum_probs=256.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHH-hCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVST-LGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~-l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|| |++|+.+++.|+++. .. +|+++||+.++++++.+. ...+++.+++|+.|.+++.++++++|+||||+||+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 799999 999999999999974 45 999999999999998876 34689999999999999999999999999999998
Q ss_pred CCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEE
Q 014177 120 QQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLR 199 (429)
Q Consensus 120 ~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~ 199 (429)
.. .+++++|+++|+||+|.+. .......+++.++++|+.+++++|++||++++++.++++.+. ....+++.++
T Consensus 79 ~~---~~v~~~~i~~g~~yvD~~~---~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~-~~~~~v~~~~ 151 (386)
T PF03435_consen 79 FG---EPVARACIEAGVHYVDTSY---VTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELD-AEGDEVESVD 151 (386)
T ss_dssp GH---HHHHHHHHHHT-EEEESS----HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHH-HTTHEEEEEE
T ss_pred hh---HHHHHHHHHhCCCeeccch---hHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhh-hhcccceEEE
Confidence 43 7999999999999999553 345566899999999999999999999999999999998765 2344677787
Q ss_pred EEeeecC--CC-C-CC-cc----HHHHHHHHhCCceEEeeCCeEEEecCCCCCeeeecCCCceeeeEEeecCchhhhhhh
Q 014177 200 FSYYTAG--TG-G-AG-PT----ILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSARE 270 (429)
Q Consensus 200 ~~~~~~G--~~-~-~g-~~----~~~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~~~fp~~~g~~~~~~~~~~e~~tl~~ 270 (429)
+ ++..- +. . .+ .. .....+.++..|..+++||+++.+++++..+.++||.+++...++.+.+++..++++
T Consensus 152 ~-~~g~~~~p~~~~~~~~~~~~ws~~~~l~e~~~~~~~~~~G~~~~v~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 230 (386)
T PF03435_consen 152 I-YVGGLPAPEAPDNPLGYKFTWSPEGVLEEYSPPARVYRDGKWVEVPPFSEEERVDFPYPIGPGGAYEAFHPEDSTLTR 230 (386)
T ss_dssp E-EEEEEEEGCG--TTTSEEBSS-HHHHHHHHCS-EEEEETTEEEEEETTTTCCCETEEE-SSTTECEEEEEECBGTTHH
T ss_pred E-EEccccCCCCCCCCcccceeeeehhhHHhhcccceEeeCCEEEEecCccccceeeeeeEecccceeeeecCcCCceee
Confidence 5 44322 11 0 11 11 122355678889999999999999999999999999989998888888888888887
Q ss_pred hcC-CC---eEEEEcccChhhhhHHHHHhHhhcchhhccchhh------hhhhhhcchhhhhhhcccCCcceEEEEEEEe
Q 014177 271 VLG-VP---TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSK------VQQLVQLFDPVVRAFDGIAGERVSMRVDLEC 340 (429)
Q Consensus 271 ~~~-~~---~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~g 340 (429)
.+. .+ ++..+ +.+|+++...++.+..++|++.++. .+.+..+..+..+.. +...|.+.++++++|
T Consensus 231 ~~~~~~~~~~~~~~----t~r~~~~~~~~~~l~~lgl~~~~~~~~~~~p~~~l~~~l~~~~~~~-~~~~d~~~~~v~v~G 305 (386)
T PF03435_consen 231 SFYGLPEVRNVIRK----TLRYPGFLNVMKLLKDLGLLSEEPVYVYVSPRDLLAALLEKRLRPG-PGERDMVVLRVEVEG 305 (386)
T ss_dssp HHTT-TTTSEEEEE----EEEETTHHHHHHHHHHTTTTSHCBEGGGSCHHHHHHHHHHHHSCTT-TT-SEEEEEEEEEEE
T ss_pred EeecCCCcccEEEE----EeeEhhHHHHHHHHHhhcccCCccccchhhHHHHHHhhChhhcCCc-ccccCceeEEEEEEE
Confidence 775 33 56545 6688999998988999999988763 333444433333221 124567889999998
Q ss_pred --CCCCceEEeee------------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcc
Q 014177 341 --TDGRNTVGIFS------------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTI 405 (429)
Q Consensus 341 --~dG~~~~~~~~------------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~ 405 (429)
++|++....+. .++|+++||.+++++|+++++|+ ..+||++||++. .++-..++|+++....+
T Consensus 306 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~m~~~tg~~~ai~a~ll~~g~~~~~GV~~PE~~~--~~~~~~~~l~~l~~~GI 383 (386)
T PF03435_consen 306 WDKDGKPVRRTSYLVYPSGDPIETGGSAMARTTGIPAAIAAQLLADGEITRPGVVPPEAAF--DPDPFEDLLEELAKRGI 383 (386)
T ss_dssp EETTCEEEEEEEEEEEEEEECCCSSCHHHHHHHHHHHHHHHHHHHTTSSH-SEEE-SHHCC--SHHHHHHHHHHHHHHCE
T ss_pred EeCCCCEEEEEEeeceecccccCCCCCccHHHhhHHHHHHHHHHHCCCcCCCeEECHHHhC--CCchHHHHHHHHHcCCC
Confidence 68886532111 34589999999999999999999 699999999973 22333445665543344
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=267.39 Aligned_cols=348 Identities=18% Similarity=0.235 Sum_probs=259.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCce-------------EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQ-------------IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-------------v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
-++++|+|+|+ |+||+.+++.|.+. ++++ |+++|++.++++++++.++ +++.+++|++|.+++.
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-NAEAVQLDVSDSESLL 643 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHHHHHHHHHhcC-CCceEEeecCCHHHHH
Confidence 35789999995 99999999999874 5555 8899999999888887663 5788999999999999
Q ss_pred HHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 104 MALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 104 ~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
++++++|+||+|+++... ..++++|+++|+|+++.+... .....+++.++++|+++++++|++||+.++++..+
T Consensus 644 ~~v~~~DaVIsalP~~~H---~~VAkaAieaGkHvv~eky~~---~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~ 717 (1042)
T PLN02819 644 KYVSQVDVVISLLPASCH---AVVAKACIELKKHLVTASYVS---EEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKM 717 (1042)
T ss_pred HhhcCCCEEEECCCchhh---HHHHHHHHHcCCCEEECcCCH---HHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHH
Confidence 999999999999876543 799999999999999987332 35567889999999999999999999999999998
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCC---C--CccHHHHH----HHHhCCceEEeeCCeEEEecC---CCCCeeeecCC-
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGG---A--GPTILATS----FLLLGEEVVAYNKGEEITLEP---YSGMLSVDFGK- 250 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~---~--g~~~~~~~----~~~~~~~~~v~~~G~~~~v~~---~~~~~~~~fp~- 250 (429)
+.... ..++++..++. ++++-|.+ . ..+.|+|+ +..+.+|.++++||+.+.+++ ++..+.++|+.
T Consensus 718 Id~~~-~~~GkI~s~~s-~~GGLP~pe~~~npL~YkfsWSp~gvi~~~~npa~~i~~G~~~~V~~~~l~~~~~~~~~~~~ 795 (1042)
T PLN02819 718 IDDAH-ERGGKVKSFTS-YCGGLPSPEAANNPLAYKFSWNPAGAIKAGQNPAVYKSNGQIIHVDGENLFASAVRFRLPNL 795 (1042)
T ss_pred HHhhc-ccCCcEEEEEE-EEcCccCcccCCCcccccccCCHHHHHHHhcCcceeeECCEEEEecchhhhhhccccccccC
Confidence 87653 23578888887 55433421 1 23456664 457888999999999999998 78888887753
Q ss_pred -CceeeeEEeecCchhhhhhhhcCCC-eEEEEcccChhhhhHHHHHhHhhcchhhccchhhh-----------hhhhh--
Q 014177 251 -GIGRKDVFLLNLPEVRSAREVLGVP-TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKV-----------QQLVQ-- 315 (429)
Q Consensus 251 -~~g~~~~~~~~~~e~~tl~~~~~~~-~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~~-----------~~l~~-- 315 (429)
++ ..++|+ .-|.....+.++++ ++.+- -..+.||+++..+|+.|..+||+++++.. +.+..
T Consensus 796 p~~-~lE~~p--NRdSl~y~~~Ygi~~~a~tl-~RgTLRy~Gf~~~~~~l~~LGl~~~~~~~~~~~~~~~tw~~~~~~~l 871 (1042)
T PLN02819 796 PAF-ALECLP--NRDSLVYGELYGIEKEAATI-FRGTLRYEGFSMIMATLSKLGLFDSENHPLLSTGKRTTYGALLDALL 871 (1042)
T ss_pred CCc-ceEEcc--CCCcchhHHHhCCCccccee-eEEEEecCCHHHHHHHHHHcCCCCCCccccccCCCCCCHHHHHHHHh
Confidence 23 566664 34433344477765 44421 12278999999999999999998764210 00000
Q ss_pred ---------------------------------------------------------cchhhhhh------hcccCCcce
Q 014177 316 ---------------------------------------------------------LFDPVVRA------FDGIAGERV 332 (429)
Q Consensus 316 ---------------------------------------------------------~~~~~~~~------~~~~~~~~~ 332 (429)
.++-+... +.+.+.|.+
T Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~v~~~~~tp~d~l~~~Le~kl~y~~~e~DmV 951 (1042)
T PLN02819 872 LQDGHNENGPLAGEEEISKRLAKLGHSKNRETAAKAAKTIVFLGLDEETEVPKSCKSIFDVTCYRMEEKLAYSGNEQDMV 951 (1042)
T ss_pred CCCCcccccccccchhHHHHHHhhhcccchhhHHHHHHHhhhhcccccccccCCCCCHHHHHHHHHHHHhCCCCCCCeEE
Confidence 00111111 122456789
Q ss_pred EEEEEEEeC--CCCc-eEEeee------------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCC---CCCCCcchhHH
Q 014177 333 SMRVDLECT--DGRN-TVGIFS------------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFP---EEPEGIAIEAR 393 (429)
Q Consensus 333 ~~~v~v~g~--dG~~-~~~~~~------------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~p---e~~~~~~~~~~ 393 (429)
.|++++++. ||++ .+++++ +++|+++||+++|++|+++++|+ ..+||+.| |..
T Consensus 952 vl~h~~~~e~~~g~~~~~~t~tlv~~Gd~~~g~~~SAMAktVG~P~aiaa~lil~g~I~~~Gv~~P~~~eiy-------- 1023 (1042)
T PLN02819 952 LLHHEVEVEFPDSKRIEKHSATLLEFGEIKNGRTTTAMAKTVGIPAAIGALLLLEGKIKTRGVLRPLEPEVY-------- 1023 (1042)
T ss_pred EEEEEEEEEECCCCceEEEEEEEEEecCcCCCCcccHHHHhhcchHHHHHHHHhCCCcCCCeeeCCCCHHHh--------
Confidence 999999974 7776 443332 25699999999999999999999 78899999 444
Q ss_pred HHHHHHhhcCcchh
Q 014177 394 EVLLKRASQGTINF 407 (429)
Q Consensus 394 ~~~l~~~~~~~~~~ 407 (429)
.|.|+++.+.++.|
T Consensus 1024 ~p~l~~L~~~GI~~ 1037 (1042)
T PLN02819 1024 VPALEILQAYGIKL 1037 (1042)
T ss_pred HHHHHHHHHcCCce
Confidence 55899888776655
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-26 Score=212.57 Aligned_cols=354 Identities=19% Similarity=0.189 Sum_probs=236.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
...++|.||+||.|..++++|..+ +....+++||..++.++...++... ...++-+++.+++.+.+.+||+||+||
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~--g~~~aLAgRs~~kl~~l~~~LG~~~--~~~p~~~p~~~~~~~~~~~VVlncvGP 81 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLARE--GLTAALAGRSSAKLDALRASLGPEA--AVFPLGVPAALEAMASRTQVVLNCVGP 81 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHc--CCchhhccCCHHHHHHHHHhcCccc--cccCCCCHHHHHHHHhcceEEEecccc
Confidence 368999999999999999999997 7778999999999999999997544 444555588999999999999999999
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeE
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPER 197 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~ 197 (429)
|..++ .+++++|+.+|+||.|++++..+.+... .++.+++++|+.++++||++--.|.+-...+.++....-..++..
T Consensus 82 yt~~g-~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~~~~~d~~~~~~~ 160 (382)
T COG3268 82 YTRYG-EPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLKQALPDGTEELIA 160 (382)
T ss_pred ccccc-cHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHHhhCcccccchhh
Confidence 99888 6999999999999999999999888766 559999999999999999997777775555555443332333433
Q ss_pred EEEE--eeecCCCCCCccHHHHHHHHhCCceEEeeCCeEEEecCCCCCee---eecCCCceeeeEEeecCchhhhhhhhc
Q 014177 198 LRFS--YYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITLEPYSGMLS---VDFGKGIGRKDVFLLNLPEVRSAREVL 272 (429)
Q Consensus 198 i~~~--~~~~G~~~~g~~~~~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~---~~fp~~~g~~~~~~~~~~e~~tl~~~~ 272 (429)
.++. +.. +.+-.+. .+.+..+.+.......++|+.+.+|..-..++ +|||.+.|.+.+-.+++|++.+...+.
T Consensus 161 t~l~l~s~t-~~g~S~G-Taat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~rg~~~a~~~~Wg~V~a~~~t~ 238 (382)
T COG3268 161 THLALGSFT-GSGISGG-TAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTLPWGFVAAAFNTT 238 (382)
T ss_pred hheeeeecc-cCCcccc-cHHHHHHHHHhccCCcccCceeccCceeccCCCCCCCcccCCccccCcccCchhhhhhhccC
Confidence 3332 111 1121222 33455666666777889999999887655555 999988888888778889999988888
Q ss_pred CCC---eEEEEcccChhhhhHHHHHhHhhcchhhccchhhhhh-hhhcchhhhh----hhcc--cCCcceEEEEEEEeCC
Q 014177 273 GVP---TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQ-LVQLFDPVVR----AFDG--IAGERVSMRVDLECTD 342 (429)
Q Consensus 273 ~~~---~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~~~~-l~~~~~~~~~----~~~~--~~~~~~~~~v~v~g~d 342 (429)
.++ ++..|+- .++.+....+.+..+-.+-....+++ +..+.+.+.. ++.. .....+.+..+.+-.-
T Consensus 239 iv~rsn~l~~~~~----~~pv~~~a~~~~~~~~~ll~~~~~~~~~r~lv~r~~~k~g~GPt~e~qarg~~~~~~~~~tat 314 (382)
T COG3268 239 IVPRSNALEVWIY----AAPVLALAGRGIGALLPLLGSAYVRDLLRGLVLRVVPKPGTGPTEEAQARGRYTIEGETTTAT 314 (382)
T ss_pred ccccccceeeeec----hhHHHHHHHhccchhhhhhhhHHHhhhhHhhhheeccCCCCCCCHHHHhcCcceEEEEEEecc
Confidence 777 6655532 22222222222211111111111111 1111111111 1110 0112233444444344
Q ss_pred CCc-eEEeeecCCcchhhhHHHHHH-HHHHHcCC---CCCcccCCCCCCCcchhHHHHHHHHhhcCcchhhhc
Q 014177 343 GRN-TVGIFSHRRLSVSVGTAIAAF-VLAVLEGA---TQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMN 410 (429)
Q Consensus 343 G~~-~~~~~~~~~~~~~T~~~~a~~-a~~ll~G~---~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~~~~~~ 410 (429)
|.+ ..++-+... +..|+...+.+ .++.++.. .+.||++|....| +.+++|+...++.|.+.
T Consensus 315 G~r~~ari~t~~~-y~stav~~a~~~l~~ald~~~~~~~gGv~TPA~~lG------~dlv~rLp~aGv~~~~~ 380 (382)
T COG3268 315 GERYTARITTDND-YYSTAVLLAQAALALALDRDKLSEPGGVLTPAAALG------ADLVERLPGAGVTFGTT 380 (382)
T ss_pred CCceeeEEecccc-hHHHHHHHHHHHHHHHhcCCcccCCCcccChHHHHh------HHHHHhcccccceeecc
Confidence 555 344444444 55566666644 44444444 5889999999874 56999999988887654
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-18 Score=160.84 Aligned_cols=191 Identities=19% Similarity=0.196 Sum_probs=148.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC--chhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN--REKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~--~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
|++|||||+||||++.++.+++.+++.+|++.|.= ....+.+....+ ++..++++|+.|.+.+.++++ ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 58999999999999999999998888788888751 122333333232 478999999999999999998 6999999
Q ss_pred cCCCCCC---------------CchHHHHHHHHHcCC--cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 115 AAGPFQQ---------------APKCTVLEAAIETKT--AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 115 ~agp~~~---------------~~~~~v~~aa~~~gv--~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
.|+-.+. .|+.+++|++++... +++.+|++..|...... +....+ ..+.-| .+.|.+||
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~-~~~FtE-~tp~~P--sSPYSASK 156 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLD-DDAFTE-TTPYNP--SSPYSASK 156 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCC-CCCccc-CCCCCC--CCCcchhh
Confidence 9986543 378999999999885 78999988877543221 001111 133333 35589999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHH--HHhCCceEEeeCCeEE
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSF--LLLGEEVVAYNKGEEI 235 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~--~~~~~~~~v~~~G~~~ 235 (429)
..++++++.|.+.++.++...++ .++|||.+.....++-++ ...+.|.++|++|+++
T Consensus 157 AasD~lVray~~TYglp~~Itrc-SNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~i 215 (340)
T COG1088 157 AASDLLVRAYVRTYGLPATITRC-SNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQI 215 (340)
T ss_pred hhHHHHHHHHHHHcCCceEEecC-CCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcce
Confidence 99999999999999999999998 689999999887777544 3578999999999965
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-18 Score=163.05 Aligned_cols=132 Identities=21% Similarity=0.339 Sum_probs=118.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhH--cCCCceEEEEecCchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSK--LCPDLQIVVGSRNREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~--~~~g~~v~v~~R~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
..++|+||+||.|..+++.+.+ ..++..+-+++||++|+++..+... ...-++.+|.+|++++.+..+++.
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~ 85 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR 85 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence 5799999999999999999987 3347899999999999998876653 122378899999999999999999
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCc
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIY 172 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~ 172 (429)
+|+||+||+-..| .+++++|++.|+|++|+++++.|.+.++ .+++.|+++|+-++..|||+
T Consensus 86 vivN~vGPyR~hG-E~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfD 147 (423)
T KOG2733|consen 86 VIVNCVGPYRFHG-EPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFD 147 (423)
T ss_pred EEEeccccceecC-cHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccC
Confidence 9999999998888 6999999999999999999999998765 89999999999999999998
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-16 Score=157.88 Aligned_cols=189 Identities=15% Similarity=0.103 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHH----HHHHhC----CCcEEEEeeCCChHHHHHHhcC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAA----MVSTLG----KNSEFAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~----l~~~l~----~~v~~~~~Dl~d~~~l~~~~~~ 108 (429)
|++|+|+||||+||+|+++++.|+++ +++|++.+|....... +....+ .++.++.+|+.|.+.+.+++++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 77899999999999999999999997 7899999986542221 111111 2577899999999999999999
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCC
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~ 171 (429)
+|+|||+|+.... .++.+++++|.+.+++ +|.+|+...|.... ....+. .+ .....
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-----~~--~~p~~ 163 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-----RI--GRPLS 163 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-----CC--CCCCC
Confidence 9999999974321 2467999999999985 56666544443211 111111 01 11124
Q ss_pred ccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc----cHHHHHHH--HhCCceEEeeCCeEE
Q 014177 172 YPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----TILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
.||.||++++.+++.|.++++.++..+|+ ++.+||++... .+++..+. ..++++.++.+|+..
T Consensus 164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~-~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~ 232 (348)
T PRK15181 164 PYAVTKYVNELYADVFARSYEFNAIGLRY-FNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTS 232 (348)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCEEEEEe-cceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCce
Confidence 69999999999999888778899999998 78899875321 23343332 335677777777654
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=149.37 Aligned_cols=158 Identities=23% Similarity=0.272 Sum_probs=122.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
|+|||+||+|+|||+.+..|++. |++|++.|.-.. ..+.+.. . ..+++++|+.|.+.|++.++ ++|.|||.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~~v~~-~--~~~f~~gDi~D~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKIALLK-L--QFKFYEGDLLDRALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHHHhhh-c--cCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence 58999999999999999999997 899999996433 2222221 1 15899999999999999997 799999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH--hhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK--SFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
+-... .|+..++++|.++|++.+.+|++...|.... ++.|..... .-..||.||+|
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~-------p~NPYG~sKlm 148 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLA-------PINPYGRSKLM 148 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCC-------CCCcchhHHHH
Confidence 74321 3689999999999999988888776554332 343332111 22459999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.+++.+.+.+.+..+...+|+ ||..|..+.
T Consensus 149 ~E~iL~d~~~a~~~~~v~LRY-FN~aGA~~~ 178 (329)
T COG1087 149 SEEILRDAAKANPFKVVILRY-FNVAGACPD 178 (329)
T ss_pred HHHHHHHHHHhCCCcEEEEEe-cccccCCCC
Confidence 999999999888888899997 998886543
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1e-15 Score=156.72 Aligned_cols=207 Identities=18% Similarity=0.164 Sum_probs=135.3
Q ss_pred ccccCCccC-CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--------------------hHHHHHHH
Q 014177 26 TVLDGAHFQ-MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--------------------KGAAMVST 84 (429)
Q Consensus 26 ~~~~~~~~~-~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--------------------~~~~l~~~ 84 (429)
.-||..+.+ ...++|+||||||+||||+++++.|+++ |++|+++||... +++.+...
T Consensus 33 ~~~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 110 (442)
T PLN02572 33 LATPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV 110 (442)
T ss_pred ccCCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHh
Confidence 334444433 3467889999999999999999999997 889999874211 01111111
Q ss_pred hCCCcEEEEeeCCChHHHHHHhc--CccEEEecCCCCCC------------------CchHHHHHHHHHcCC--cEEEeC
Q 014177 85 LGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAGPFQQ------------------APKCTVLEAAIETKT--AYIDVC 142 (429)
Q Consensus 85 l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~agp~~~------------------~~~~~v~~aa~~~gv--~~vdis 142 (429)
...+++++.+|++|.+.+.++++ ++|+|||+|+.... .++.+++++|.+.|+ +.|.++
T Consensus 111 ~~~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~S 190 (442)
T PLN02572 111 SGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLG 190 (442)
T ss_pred hCCcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEe
Confidence 12358899999999999999888 58999999954210 246788999999986 456666
Q ss_pred CChhHHHHHHhhHHHH-------HHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc---
Q 014177 143 DDTIYSQRAKSFKDRA-------IAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP--- 212 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~a-------~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~--- 212 (429)
+...|.....+.++.. .+...+........||.||++++.+++.+.++++.++..+|+ +++||+++...
T Consensus 191 S~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~-~~vyGp~~~~~~~~ 269 (442)
T PLN02572 191 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQ-GVVYGVRTDETMMD 269 (442)
T ss_pred cceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEec-ccccCCCCcccccc
Confidence 6555532111111110 000000011223469999999999999998888999999998 78899975431
Q ss_pred --------------cHHHHHHH--HhCCceEEeeCCeEE
Q 014177 213 --------------TILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 213 --------------~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
..+...+. ..++++.++.+|++.
T Consensus 270 ~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~ 308 (442)
T PLN02572 270 EELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQT 308 (442)
T ss_pred cccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEE
Confidence 12222222 235677788887754
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.1e-16 Score=141.99 Aligned_cols=205 Identities=17% Similarity=0.183 Sum_probs=145.2
Q ss_pred ccccccccccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-C-CCcEEEE
Q 014177 16 MASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-G-KNSEFAE 93 (429)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~-~~v~~~~ 93 (429)
+.+..|--.++.-|.+ +++|+|+||+|||||++++.|..+ +++|+++|.-...-....... . .+++.+.
T Consensus 11 ~~~~~~~~~~~~~p~~-------~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~ 81 (350)
T KOG1429|consen 11 APNNPSRLREQVKPSQ-------NLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFTGRKENLEHWIGHPNFELIR 81 (350)
T ss_pred CCCCcchhhhcccCCC-------CcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccccchhhcchhccCcceeEEE
Confidence 4444555555554444 489999999999999999999987 789999986433322222222 1 4677787
Q ss_pred eeCCChHHHHHHhcCccEEEecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHH
Q 014177 94 VNIYNEGSLLMALRDVDLVVHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDR 157 (429)
Q Consensus 94 ~Dl~d~~~l~~~~~~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~ 157 (429)
-|+.. .++..+|.|+|+|.|... .++.+++..|.+.+...+..|++..|..... +..+.
T Consensus 82 hdv~~-----pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ 156 (350)
T KOG1429|consen 82 HDVVE-----PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVET 156 (350)
T ss_pred eechh-----HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccc
Confidence 78744 477889999999976542 3678999999999988887776655543111 11111
Q ss_pred HHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC--CccHHHHHHH--HhCCceEEeeCCe
Q 014177 158 AIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA--GPTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 158 a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~--g~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
. .|-..-++...+|+..|.+++.++..|.++.+.++...|+ |+.|||... +..+++.... ..++|+.+|+||+
T Consensus 157 y--wg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRi-fNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~ 233 (350)
T KOG1429|consen 157 Y--WGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARI-FNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGK 233 (350)
T ss_pred c--ccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEee-ecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCc
Confidence 1 1222223555779999999999999999999999999999 999999853 4445443332 4578999999999
Q ss_pred EEEe
Q 014177 234 EITL 237 (429)
Q Consensus 234 ~~~v 237 (429)
+++.
T Consensus 234 qtRS 237 (350)
T KOG1429|consen 234 QTRS 237 (350)
T ss_pred ceEE
Confidence 7743
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-15 Score=144.28 Aligned_cols=165 Identities=18% Similarity=0.186 Sum_probs=121.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHH--HHHHhC---CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAA--MVSTLG---KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~--l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.+++|+||||+||||+++++.|+++ ||.|....|+++..+. ....++ .+...+..|+.|.+++.+++++||.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence 5689999999999999999999998 8999999999887443 233333 45889999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHcC-CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC-------
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIETK-TAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG------- 170 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~g-v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g------- 170 (429)
||+|.|+.. .|+.+++++|.+.. ++.|.++++..-....... .....++....
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~-----~~~~~vvdE~~wsd~~~~ 157 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPN-----IGENSVVDEESWSDLDFC 157 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcC-----CCCCcccccccCCcHHHH
Confidence 999988653 36789999999998 7777665554211100000 00001111111
Q ss_pred ----CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 171 ----IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 171 ----~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+.|.+||.+++..+..+.++.+.....+... .+.||.-.
T Consensus 158 ~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~-lV~GP~l~ 200 (327)
T KOG1502|consen 158 RCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPG-LVFGPGLQ 200 (327)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCC-ceECCCcc
Confidence 4699999999999999998877776666663 35677643
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3e-15 Score=148.76 Aligned_cols=192 Identities=14% Similarity=0.167 Sum_probs=130.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCC-ChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY-NEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~-d~~~l~~~~~~~DvVi~~ag 117 (429)
||+|+||||+||+|+++++.|++. .+++|++.+|+.++...+... .+++++.+|+. +.+.+.++++++|+|||+|+
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~-~~~~V~~~~r~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa 77 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILET-TDWEVYGMDMQTDRLGDLVNH--PRMHFFEGDITINKEWIEYHVKKCDVILPLVA 77 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhC-CCCeEEEEeCcHHHHHHhccC--CCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence 468999999999999999999975 258999999876654433221 35889999997 67788888899999999986
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .++.+++++|.+.+.++|.+|+...|.... ..+.+........-.....+.||.||..++
T Consensus 78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e 157 (347)
T PRK11908 78 IATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMD 157 (347)
T ss_pred cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHH
Confidence 4321 235788999999988788888765553211 112221100000000112356999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCC--------ccHHHHHHH--HhCCceEEeeCCeE
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAG--------PTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g--------~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
.++..+.++++.++..+|+ ++.+|++... ...+...+. ..+.++.++.+|+.
T Consensus 158 ~~~~~~~~~~~~~~~ilR~-~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~ 219 (347)
T PRK11908 158 RVIWAYGMEEGLNFTLFRP-FNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQ 219 (347)
T ss_pred HHHHHHHHHcCCCeEEEee-eeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCce
Confidence 9999887777888999998 6788986421 223433333 23556666666654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.9e-15 Score=149.45 Aligned_cols=171 Identities=13% Similarity=0.142 Sum_probs=121.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH----hCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST----LGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.+.|+||||||+||||+++++.|++++ +++|++++|+.++...+... ...+++++.+|+.|.+.+.++++++|+|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V 90 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTET-PHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT 90 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence 456799999999999999999999862 48999999887765554321 1236889999999999999999999999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHH-----------HHcCCcE
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRA-----------IAANIPA 165 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a-----------~~~g~~~ 165 (429)
||||+.... .++.+++++|.+.+.++|.+|+...|..... ...+.. .+...+.
T Consensus 91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~ 170 (386)
T PLN02427 91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC 170 (386)
T ss_pred EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence 999974211 1356788999888877777776554422100 000000 0000000
Q ss_pred ----EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 166 ----ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 166 ----i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+....+.||.||.+++.++..+.+.++.++..+|+ ++++|+++
T Consensus 171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~-~~vyGp~~ 217 (386)
T PLN02427 171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRP-FNWIGPRM 217 (386)
T ss_pred ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecc-cceeCCCC
Confidence 00112469999999999999887777889999998 67889874
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-14 Score=155.82 Aligned_cols=195 Identities=13% Similarity=0.150 Sum_probs=131.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH-HHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS-LLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~-l~~~~~~~DvVi~~ 115 (429)
+++|+|+||||+||||+++++.|+++ .+++|++.+|+......+.. ..+++++.+|++|.+. ++++++++|+|||+
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~-~g~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl 389 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRD-DNYEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHSEWIEYHIKKCDVVLPL 389 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhC-CCcEEEEEeCCchhhhhhcC--CCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence 56789999999999999999999984 26899999997754333221 1358899999998655 57788899999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|+.... .++.+++++|.+.+.++|.+|+...|.... ..++|.....-..-.....+.||.||.+
T Consensus 390 Aa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~ 469 (660)
T PRK08125 390 VAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQL 469 (660)
T ss_pred ccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHH
Confidence 974321 245788999999997778888765553211 1122211000000000112469999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC--------ccHHHHHHHH--hCCceEEeeCCeEE
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGAG--------PTILATSFLL--LGEEVVAYNKGEEI 235 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g--------~~~~~~~~~~--~~~~~~v~~~G~~~ 235 (429)
++.++..+.++++.++..+|+ ++++|+++.. ...+...+.. .++++.++.+|++.
T Consensus 470 ~E~~~~~~~~~~g~~~~ilR~-~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~ 534 (660)
T PRK08125 470 LDRVIWAYGEKEGLRFTLFRP-FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK 534 (660)
T ss_pred HHHHHHHHHHhcCCceEEEEE-ceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee
Confidence 999999988778889999998 6789987531 1233333322 24566666666543
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.6e-14 Score=140.80 Aligned_cols=170 Identities=14% Similarity=0.095 Sum_probs=121.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHH-HHHhC---CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAM-VSTLG---KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l-~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.++++|+|+||+||||+++++.|+++ |++|++.+|+.++.... ...+. .+++++.+|++|.+++.++++++|+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 45789999999999999999999997 89999999987643211 11221 25788999999999999999999999
Q ss_pred EecCCCCCC----------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHH-----hhHHHHHHcCCcEEecCCCccchh
Q 014177 113 VHAAGPFQQ----------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAK-----SFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 113 i~~agp~~~----------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~-----~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
||+|++... .++.+++++|.+.+++. |.+|+....+.... .++|..- ............|+.|
T Consensus 86 ih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~-~~~~~~~~p~~~Y~~s 164 (342)
T PLN02214 86 FHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCW-SDLDFCKNTKNWYCYG 164 (342)
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccC-CChhhccccccHHHHH
Confidence 999987543 24678899999999865 45554332322110 1222100 0000001122459999
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 177 NVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
|+.++.++..+.++++.++..+|+ .+++|++..
T Consensus 165 K~~aE~~~~~~~~~~g~~~v~lRp-~~vyGp~~~ 197 (342)
T PLN02214 165 KMVAEQAAWETAKEKGVDLVVLNP-VLVLGPPLQ 197 (342)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeC-CceECCCCC
Confidence 999999999988777888999998 678998754
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.1e-14 Score=140.32 Aligned_cols=167 Identities=16% Similarity=0.160 Sum_probs=121.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+|+||||||+||||+++++.|+++ |++|++.+|+.++.+.+...+. .+++++.+|+.|.+.+.++++++|+|||+
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 4578999999999999999999997 8899999998776665544432 35788999999999999999999999999
Q ss_pred CCCCCC----------------------CchHHHHHHHHHcC-Cc-EEEeCCChhHHHHH------HhhHHHHHHcCCcE
Q 014177 116 AGPFQQ----------------------APKCTVLEAAIETK-TA-YIDVCDDTIYSQRA------KSFKDRAIAANIPA 165 (429)
Q Consensus 116 agp~~~----------------------~~~~~v~~aa~~~g-v~-~vdis~~~~~~~~~------~~~~~~a~~~g~~~ 165 (429)
|+.... .++.+++++|.+.+ +. .|.+|+...|.... ..++|.. ..+.
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~---~~p~ 163 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETC---QTPI 163 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCccc---CCcH
Confidence 975321 13456789988875 54 45566554443211 0111110 0010
Q ss_pred -----EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 166 -----ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 166 -----i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.......||.||++++.++..|.++++.++..+|+ +++|||+..
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~-~~vyGp~~~ 212 (353)
T PLN02896 164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVIT-TTVAGPFLT 212 (353)
T ss_pred HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcC-CcccCCCcC
Confidence 01122459999999999999998878889999998 788999764
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.6e-14 Score=136.00 Aligned_cols=164 Identities=21% Similarity=0.165 Sum_probs=109.1
Q ss_pred EEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH-HHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA-AMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~-~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
|||||+||+|+++++.|+++++.++|.+.+++..... ...... +..+++++|++|.+++.++++++|+|||+|++...
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~ 79 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS-GVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPP 79 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc-cceeEEEeccccHHHHHHHhcCCceEEEeCccccc
Confidence 6999999999999999999843378999998765322 111111 22348999999999999999999999999975422
Q ss_pred --------------CchHHHHHHHHHcCCcEEEeCCCh-hHHHH--HHhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 122 --------------APKCTVLEAAIETKTAYIDVCDDT-IYSQR--AKSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 122 --------------~~~~~v~~aa~~~gv~~vdis~~~-~~~~~--~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
.|+.+++++|.+.+++++..+++. .+... ...+...- + ..+.-......|+.||.+|+.++
T Consensus 80 ~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~d-E-~~~~~~~~~~~Y~~SK~~AE~~V 157 (280)
T PF01073_consen 80 WGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGD-E-DTPYPSSPLDPYAESKALAEKAV 157 (280)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCC-c-CCcccccccCchHHHHHHHHHHH
Confidence 368899999999999986444333 22210 11111000 0 01111113345999999999998
Q ss_pred HHHHh---hcC--CCCeEEEEEeeecCCCCC
Q 014177 185 RVARN---ESK--GEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 185 ~~~~~---~~~--~~v~~i~~~~~~~G~~~~ 210 (429)
..+.. +.+ .....+|. ..++|++..
T Consensus 158 ~~a~~~~~~~g~~l~t~~lRP-~~IyGp~d~ 187 (280)
T PF01073_consen 158 LEANGSELKNGGRLRTCALRP-AGIYGPGDQ 187 (280)
T ss_pred HhhcccccccccceeEEEEec-cEEeCcccc
Confidence 87653 111 33456777 357888754
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.7e-14 Score=139.92 Aligned_cols=187 Identities=19% Similarity=0.230 Sum_probs=123.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchh--HHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREK--GAAMVSTL-GKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~--~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
|++||||||+||||+++++.|+++ +++ +++.+|.... ...+.... ..++.++.+|++|.+++.++++ ++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 478999999999999999999997 665 4455554321 11221111 1257788999999999999988 48999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHc---------CC-cEEEeCCChhHHHHH---HhhHHHHHHcCCc
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIET---------KT-AYIDVCDDTIYSQRA---KSFKDRAIAANIP 164 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~---------gv-~~vdis~~~~~~~~~---~~~~~~a~~~g~~ 164 (429)
||||+.... .++.+++++|.+. ++ ++|.+|+...|.... ..+.|. .+
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~ 153 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TP 153 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CC
Confidence 999986421 2467789999763 33 556676554442110 011111 11
Q ss_pred EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 165 AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 165 ~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
. .....||.||..++.+++.+.++++.++..+|. .+.+||+......+...+. ..+.++.++.+|+..
T Consensus 154 ~--~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~-~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 223 (355)
T PRK10217 154 Y--APSSPYSASKASSDHLVRAWLRTYGLPTLITNC-SNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI 223 (355)
T ss_pred C--CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEee-eeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee
Confidence 1 112459999999999999988778888999998 5678988654333333332 234566677777643
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.7e-13 Score=133.62 Aligned_cols=152 Identities=25% Similarity=0.277 Sum_probs=113.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+++|+|+|+||+|+||+++++.|++++.+++|++.+|+..+...+...+. .++.++++|++|.+.+.++++++|+|||+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 46789999999999999999999987333789999998766555544443 35788999999999999999999999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
||.... .++.+++++|.+.++. .|.+|+.... .+ -..||.||..
T Consensus 82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~---------------~p-----~~~Y~~sK~~ 141 (324)
T TIGR03589 82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA---------------NP-----INLYGATKLA 141 (324)
T ss_pred cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC---------------CC-----CCHHHHHHHH
Confidence 985321 1456788888888764 4555543110 11 1349999999
Q ss_pred HHHHHHHHH---hhcCCCCeEEEEEeeecCCCC
Q 014177 180 AAELVRVAR---NESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 180 a~~~~~~~~---~~~~~~v~~i~~~~~~~G~~~ 209 (429)
++.+++.+. .+.+.++..+|. .+++|+++
T Consensus 142 ~E~l~~~~~~~~~~~gi~~~~lR~-g~v~G~~~ 173 (324)
T TIGR03589 142 SDKLFVAANNISGSKGTRFSVVRY-GNVVGSRG 173 (324)
T ss_pred HHHHHHHHHhhccccCcEEEEEee-cceeCCCC
Confidence 999987643 245677888887 56788764
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.9e-14 Score=141.47 Aligned_cols=160 Identities=11% Similarity=0.013 Sum_probs=114.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHh----CCCcEEEEeeCCChHHHHHHhc--C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTL----GKNSEFAEVNIYNEGSLLMALR--D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~--~ 108 (429)
|+||||||+||||+++++.|++. |++|++.+|+.+. ++.+.+.. +.+++++++|++|.+++.++++ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 58999999999999999999997 8999999987642 22222111 1357899999999999999988 4
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcCC----cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEec
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETKT----AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITT 168 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv----~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~ 168 (429)
+|+|||+|+.... .++.+++++|.+.++ ++|.+|+...|.... ...+|. .+. .
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~--~ 151 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPF--Y 151 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCC--C
Confidence 6999999985321 146789999998875 467777655543211 011111 111 1
Q ss_pred CCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
....||.||..++.+++.+.++++.++...++ ++.+|++.
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~-~~~~gp~~ 191 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGIL-FNHESPRR 191 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEEEee-cccCCCCC
Confidence 23469999999999999988777766666676 66777753
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.7e-14 Score=140.37 Aligned_cols=187 Identities=19% Similarity=0.166 Sum_probs=125.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+|+|+|+||+||||+++++.|.++ |++|++++|..... +.. .....+++.+|++|.+.+.++++++|+|||+|+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~--~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEH--MSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEeccccc--ccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 4589999999999999999999997 89999999864321 111 111257788999999988888889999999996
Q ss_pred CCC----------------CCchHHHHHHHHHcCCc-EEEeCCChhHHHHHH-----hhHHHHHHcCCcEEecCCCccch
Q 014177 118 PFQ----------------QAPKCTVLEAAIETKTA-YIDVCDDTIYSQRAK-----SFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 118 p~~----------------~~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~-----~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
... ..++.+++++|.+.+++ +|.+|+...|..... .+.+. ...+. .....||.
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~---~~~p~--~p~s~Yg~ 169 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKES---DAWPA--EPQDAYGL 169 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcc---cCCCC--CCCCHHHH
Confidence 531 01357899999999985 456665544421110 01110 00011 22346999
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC---c-cHHHHHHH---HhCCceEEeeCCeEE
Q 014177 176 SNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG---P-TILATSFL---LLGEEVVAYNKGEEI 235 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g---~-~~~~~~~~---~~~~~~~v~~~G~~~ 235 (429)
+|..++.++..+.++++.++..+|+ ++.||+++.. . ......+. ....++.++.+|+..
T Consensus 170 sK~~~E~~~~~~~~~~g~~~~ilR~-~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~ 235 (370)
T PLN02695 170 EKLATEELCKHYTKDFGIECRIGRF-HNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQT 235 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEE-CCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeE
Confidence 9999999999887777888999998 6789986531 1 11222221 124567777777643
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.4e-14 Score=139.47 Aligned_cols=168 Identities=15% Similarity=0.125 Sum_probs=119.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.++||||||+||||+++++.|+++ |++|++.+|+.++...+..... .++.++.+|+.|.+.+.++++++|.||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 478999999999999999999997 8899999998766554433211 247889999999999999999999999
Q ss_pred ecCCCCCC--------------CchHHHHHHHHHcC-Cc-EEEeCCChhHHHHHH--h-hHHHHHHcCC---cEEecCCC
Q 014177 114 HAAGPFQQ--------------APKCTVLEAAIETK-TA-YIDVCDDTIYSQRAK--S-FKDRAIAANI---PAITTGGI 171 (429)
Q Consensus 114 ~~agp~~~--------------~~~~~v~~aa~~~g-v~-~vdis~~~~~~~~~~--~-~~~~a~~~g~---~~i~~~g~ 171 (429)
|+|++... .++.+++++|.+.+ +. .|.+|+...++.... + +++... ... ......++
T Consensus 83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~~~ 161 (351)
T PLN02650 83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCW-SDLDFCRRKKMTGW 161 (351)
T ss_pred EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccC-Cchhhhhccccccc
Confidence 99975321 14577889999877 54 556665434432110 1 111100 000 00111234
Q ss_pred ccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 172 YPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.||.||.+++.++..|.++++.++..+|+ ++++||+..
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp-~~v~Gp~~~ 199 (351)
T PLN02650 162 MYFVSKTLAEKAAWKYAAENGLDFISIIP-TLVVGPFIS 199 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEECC-CceECCCCC
Confidence 69999999999999998888888899998 578998753
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.1e-14 Score=141.93 Aligned_cols=187 Identities=17% Similarity=0.189 Sum_probs=124.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.|+|+||||+||||+++++.|+++ |++|++++|.... .+.+..... .+++++..|+.+. .+.++|+||||
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHl 191 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHL 191 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEEC
Confidence 3478999999999999999999997 8999999975321 122211111 3567788888664 34689999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|+.... .++.+++++|.+.++++|.+++...|.... ...+|..-....+ ......||.+|+.
T Consensus 192 Aa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p--~~p~s~Yg~SK~~ 269 (436)
T PLN02166 192 ACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNP--IGERSCYDEGKRT 269 (436)
T ss_pred ceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCC--CCCCCchHHHHHH
Confidence 974321 246889999999999888887766553211 1122210000001 1123569999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCC--CccHHHHHHH--HhCCceEEeeCCeE
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGA--GPTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~--g~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
++.++..+.+.++.++..+|+ +++||+++. ....+...+. ..++++.++.+|+.
T Consensus 270 aE~~~~~y~~~~~l~~~ilR~-~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~ 327 (436)
T PLN02166 270 AETLAMDYHRGAGVEVRIARI-FNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQ 327 (436)
T ss_pred HHHHHHHHHHHhCCCeEEEEE-ccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCe
Confidence 999999988777888889998 678998753 1223333332 23566677777754
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.6e-14 Score=137.42 Aligned_cols=171 Identities=16% Similarity=0.126 Sum_probs=117.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH--HhC--CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS--TLG--KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~--~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
+++++|+||||+||||+++++.|+++ |++|++.+|+.+....... .+. ++++++.+|++|.+++.++++++|+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 84 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV 84 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence 56789999999999999999999997 7899888887654432221 121 25788999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHc-CCc-EEEeCCChhHHHHH-----HhhHHHHHH--cCCcEEecC
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIET-KTA-YIDVCDDTIYSQRA-----KSFKDRAIA--ANIPAITTG 169 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~-gv~-~vdis~~~~~~~~~-----~~~~~~a~~--~g~~~i~~~ 169 (429)
||+|++... .++.+++++|.+. +++ .|.+|+...|.... ..+++.... .........
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 999985321 1245678888776 454 45555544443210 011111000 000000112
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
...||.||.+++.++..|.++++.++..+|+ ++++|++..
T Consensus 165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~-~~vyGp~~~ 204 (338)
T PLN00198 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIP-TLMAGPSLT 204 (338)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCceEEEEeC-CceECCCcc
Confidence 2459999999999999988778889999998 678999753
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=141.16 Aligned_cols=188 Identities=17% Similarity=0.179 Sum_probs=125.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.|+|+||||+||||+++++.|+++ |++|++.+|.... .+.+...+. .+++++..|+.+. ++.++|+|||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHl 190 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHL 190 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEe
Confidence 4589999999999999999999997 8899998875332 122211121 3577888888664 34579999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|+.... .++.+++++|.+.++++|.+++...|..... ..+|..-....+ +.....|+.+|..
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P--~~~~s~Y~~SK~~ 268 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNP--IGVRSCYDEGKRT 268 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCC--CCccchHHHHHHH
Confidence 974321 2457899999999998888887665532111 111110000001 1123469999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCC--CccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGA--GPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~--g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
++.++..|.++++.++..+|+ ++.||++.. ....+...+. ..++++.++.+|++.
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~-~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~ 327 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARI-FNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT 327 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEe-ccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEE
Confidence 999999887777888899998 678998742 2233333332 235677778887644
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.1e-13 Score=147.15 Aligned_cols=195 Identities=17% Similarity=0.163 Sum_probs=132.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHH-hCCCcEEEEeeCCChHHHHHHh--cCccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVST-LGKNSEFAEVNIYNEGSLLMAL--RDVDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~-l~~~v~~~~~Dl~d~~~l~~~~--~~~Dv 111 (429)
.++|+||||||+||||+++++.|++++++++|++.+|.. +....+... ...+++++.+|++|.+.+..++ .++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 566899999999999999999999875678999888742 222322211 1146889999999998887765 58999
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcC-C-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETK-T-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~g-v-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
|||||+.... .++.+++++|.+.+ + ++|.+|+...|............+. .+.. ....||
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-~~~~--p~~~Y~ 160 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-SQLL--PTNPYS 160 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-CCCC--CCCCcH
Confidence 9999986432 13567899999887 4 5677776554432110000000000 1111 235699
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
.+|..++.++..+.+++..++..+|+ .++||+++.....+...+. ..+.++.++.+|+..
T Consensus 161 ~sK~~aE~~v~~~~~~~~l~~vilR~-~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~ 222 (668)
T PLN02260 161 ATKAGAEMLVMAYGRSYGLPVITTRG-NNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNV 222 (668)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECc-ccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCce
Confidence 99999999999887777888889998 6789988654444443332 345677888888754
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.8e-14 Score=137.49 Aligned_cols=163 Identities=14% Similarity=0.021 Sum_probs=114.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTL---GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+++++||||||+||||+++++.|+++ |++|++.+|+... ++.+.... +.++.++.+|++|.+++.++++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 81 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD 81 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence 56789999999999999999999997 8999999886542 33222111 1347889999999999988887
Q ss_pred -CccEEEecCCCCCC---------------CchHHHHHHHHHcCC------cEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 108 -DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKT------AYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 108 -~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv------~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
++|+|||||+.... .++.+++++|.+.++ ++|.+|+...|.....+..|. .+.
T Consensus 82 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~-----~~~ 156 (340)
T PLN02653 82 IKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSET-----TPF 156 (340)
T ss_pred cCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCC-----CCC
Confidence 47999999985321 245788999998886 466666554442211111111 111
Q ss_pred EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 166 ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 166 i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.....||.||..++.+++.+.++++..+...++ ++.+||+.
T Consensus 157 --~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~-~~~~gp~~ 197 (340)
T PLN02653 157 --HPRSPYAVAKVAAHWYTVNYREAYGLFACNGIL-FNHESPRR 197 (340)
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeee-ccccCCCC
Confidence 123459999999999999988777666666665 66777754
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-13 Score=135.43 Aligned_cols=163 Identities=20% Similarity=0.162 Sum_probs=115.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
+++|+|+|+||+||||+++++.|+++ |++|++.+|+..........+ ..++.++.+|++|.+++.++++ ++|+|
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIV 79 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence 56789999999999999999999997 789999998876544332222 2357789999999999999888 46999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHcC-Cc-EEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCcc
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIETK-TA-YIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~g-v~-~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~p 173 (429)
||+|+.... .++.+++++|.+.+ +. .|.+|+...|.... ..+.+. .+ ...-..|
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~--~~p~~~Y 152 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DP--LGGHDPY 152 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CC--CCCCCcc
Confidence 999974211 24578889998776 54 55565544332110 011110 01 1112459
Q ss_pred chhHHHHHHHHHHHHhhc-------CCCCeEEEEEeeecCCCC
Q 014177 174 GVSNVMAAELVRVARNES-------KGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~-------~~~v~~i~~~~~~~G~~~ 209 (429)
|.||.+++.+++.+.+++ +.++..+|+ .+.||+++
T Consensus 153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~-~~vyGp~~ 194 (349)
T TIGR02622 153 SSSKACAELVIASYRSSFFGVANFHGIKIASARA-GNVIGGGD 194 (349)
T ss_pred hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEcc-CcccCCCc
Confidence 999999999998877554 667788898 67889865
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-13 Score=132.56 Aligned_cols=346 Identities=18% Similarity=0.240 Sum_probs=219.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH-HHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG-SLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~-~l~~~~~~~DvVi~~ag 117 (429)
+++||++| +|||.+-+++.|.++ .+.+|+++.|....++++.+.. +++.+.+|+.|.+ .+++..+..|+|+.+.
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~-~dv~vtva~~~~~~~~~~~~~~--~~~av~ldv~~~~~~L~~~v~~~D~viSLl- 76 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRK-KDVNVTVASRTLKDAEALVKGI--NIKAVSLDVADEELALRKEVKPLDLVISLL- 76 (445)
T ss_pred CcceEEec-CccccchHHHHHhhc-CCceEEEehhhHHHHHHHhcCC--CccceEEEccchHHHHHhhhcccceeeeec-
Confidence 57899999 699999999999986 5789999999999888887654 3889999999988 8999999999999986
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPER 197 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~ 197 (429)
|+... .-++++|+..+.+.+..+.-. .....+.+.+..+|++++...|.+||+..+++........ +++..+.+
T Consensus 77 P~t~h--~lVaK~~i~~~~~~vtsSyv~---pe~~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh-~hgg~i~s 150 (445)
T KOG0172|consen 77 PYTFH--PLVAKGCIITKEDSVTSSYVD---PELEELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVH-EHGGKIKS 150 (445)
T ss_pred cchhh--HHHHHHHHHhhcccccccccC---HHHHhhhhhccCCCceEecccccCcchhhhhhhccchHHH-hhcceeee
Confidence 44332 578889999988777433221 2445677888899999999999999999998887776554 56667777
Q ss_pred EEEEeeecCCCC----CC-ccHHHHHHH----HhCCceEEeeCCeEEEecCCC---CCeeeecCCCceeeeEEeecCchh
Q 014177 198 LRFSYYTAGTGG----AG-PTILATSFL----LLGEEVVAYNKGEEITLEPYS---GMLSVDFGKGIGRKDVFLLNLPEV 265 (429)
Q Consensus 198 i~~~~~~~G~~~----~g-~~~~~~~~~----~~~~~~~v~~~G~~~~v~~~~---~~~~~~fp~~~g~~~~~~~~~~e~ 265 (429)
+.- ||++-|.+ .+ .+.|.|.+. ....+...|.||+.+.+..-+ ...+++|-+++ ..++|+ .-|.
T Consensus 151 f~s-ycGglpape~s~nplgykfsws~~gvl~a~rnsAky~~~Gkiv~v~g~~~~~~~~~~~~~pg~-al~~yP--Nrds 226 (445)
T KOG0172|consen 151 FKS-YCGGLPAPERSNNPLGYKFSWSPLGVLLALRNSAKYYKNGKIVEVDGGDLADTATHYDFYPGP-ALECYP--NRDS 226 (445)
T ss_pred hhh-hcCCccChhhCCCCcceeeccchhhhhhhccccchhccCCeEEEeccccHHhhccCcccCccc-cccccC--Ccch
Confidence 664 56433322 11 345666543 456788899999999987541 12233332222 334442 2222
Q ss_pred hhhhhhcCCC-eEEEEcccChhhhhHHHHHhHhhcchhhccchhh--h---------h-------------------h--
Q 014177 266 RSAREVLGVP-TVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSK--V---------Q-------------------Q-- 312 (429)
Q Consensus 266 ~tl~~~~~~~-~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~--~---------~-------------------~-- 312 (429)
--..+.++++ ...+-+ ..+.++++.+.++..|.++|++..+.. + + .
T Consensus 227 t~y~evy~I~~ea~til-rgtlryqgf~~~i~aL~~~G~~~~da~~~~~~~an~L~W~~~~~~~~g~~~~i~ed~i~~i~ 305 (445)
T KOG0172|consen 227 TEYSEVYGIPREAKTIL-RGTLRYQGFVLIIGALVRCGLLACDALEKFSIPANILTWKELLTSLGGPFSEIEEDDIKVIC 305 (445)
T ss_pred hhHHHHhcchHHHHHHH-hcccccccHHHHHHHHHHcCccchhhHhhcCCCCCcccHHHHHHhhcCCCcCccHHHHHHHH
Confidence 1122222332 111000 013355555555565666555543210 0 0 0
Q ss_pred -hhhcchh-hhhhh-------------------------------cccCCcceEEEEEEE--eCCCCceEEee-----e-
Q 014177 313 -LVQLFDP-VVRAF-------------------------------DGIAGERVSMRVDLE--CTDGRNTVGIF-----S- 351 (429)
Q Consensus 313 -l~~~~~~-~~~~~-------------------------------~~~~~~~~~~~v~v~--g~dG~~~~~~~-----~- 351 (429)
.....++ ..... ..-+.|...+++.+. ..+|+.+++.- .
T Consensus 306 ~~~~~~~~~~l~~~e~Lg~~~~k~v~~~~~~~DTl~~~l~~~l~y~~~e~Dmvvl~h~~~~~~p~g~~e~~t~~l~~yg~ 385 (445)
T KOG0172|consen 306 IYLSGKDPRILSTLEWLGLFSDKLVTVRGVSLDTLCPHLEEPLYYVDTEFDMVVLQHKFGTEPPEGKVESITHTLVLYGR 385 (445)
T ss_pred HHhhcCccchhhhhHhcCCCccccccccCCchhccccccccceeccCCccceeEEEecceeeCCCCceEEeeecHhhcCC
Confidence 0011110 00000 001234445555433 36777654322 2
Q ss_pred ---cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcc
Q 014177 352 ---HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTI 405 (429)
Q Consensus 352 ---~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~ 405 (429)
...|+.++++++|+.+.+++.|. ..+|++.|-... .-.|.|+++++-++
T Consensus 386 ~ng~samaktVg~p~ai~~~~~l~~~I~akgl~~p~~~e-----v~~p~l~~l~~~gi 438 (445)
T KOG0172|consen 386 ENGESAMAKTVGSPTAIAAKMLLDGWIRAKGLLRPMSAE-----VYRPALDRLKAYGI 438 (445)
T ss_pred ccchhHHHHhcCchHhhhhhhcccceeecccccchhhHH-----hhhHHHHHHHHhCc
Confidence 35589999999999999999999 789999885532 12568887775443
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-14 Score=137.91 Aligned_cols=161 Identities=17% Similarity=0.171 Sum_probs=112.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+||||||+||||+++++.|.++ + +|++.+|... .+.+|++|.+.+.++++ ++|+|||||+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~--g-~V~~~~~~~~--------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL--G-NLIALDVHST--------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc--C-CEEEeccccc--------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 48999999999999999999987 5 6887777531 24579999999999888 5899999997
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .++.+++++|.+.|+++|.+|++..|.... .++.|. .+ +..-..||.||+.++
T Consensus 64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~--~~P~~~Yg~sK~~~E 136 (299)
T PRK09987 64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DA--TAPLNVYGETKLAGE 136 (299)
T ss_pred cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CC--CCCCCHHHHHHHHHH
Confidence 6431 135678999999999988888776553211 122221 01 112245999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNK 231 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~ 231 (429)
.++..+. .+...+|+ ++.||+++. ..+...+.. .++++.++.+
T Consensus 137 ~~~~~~~----~~~~ilR~-~~vyGp~~~--~~~~~~~~~~~~~~~~~v~~d 181 (299)
T PRK09987 137 KALQEHC----AKHLIFRT-SWVYAGKGN--NFAKTMLRLAKEREELSVIND 181 (299)
T ss_pred HHHHHhC----CCEEEEec-ceecCCCCC--CHHHHHHHHHhcCCCeEEeCC
Confidence 9987653 35578898 578888653 233333332 2445666655
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.3e-13 Score=135.18 Aligned_cols=171 Identities=12% Similarity=0.084 Sum_probs=118.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--------CCCcEEEEeeCCChHHHHHHhc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--------GKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--------~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
.+++|+||||||+||||+++++.|+++ |++|++..|+.++.+.+.... ..++.++++|++|.+++.++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 467899999999999999999999997 899998888876655543210 1247789999999999999999
Q ss_pred CccEEEecCCCCCC---------------CchHHHHHHHHHc-CCcEEEeCCChh--HHHH--HHh----hHHHHHHcCC
Q 014177 108 DVDLVVHAAGPFQQ---------------APKCTVLEAAIET-KTAYIDVCDDTI--YSQR--AKS----FKDRAIAANI 163 (429)
Q Consensus 108 ~~DvVi~~agp~~~---------------~~~~~v~~aa~~~-gv~~vdis~~~~--~~~~--~~~----~~~~a~~~g~ 163 (429)
++|.|||+++.... .++.+++++|.+. +++.+...++.. .+.. ... +++... ...
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~-~~~ 206 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESW-SDE 206 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCC-CCh
Confidence 99999999874311 1356789999886 787654444431 1110 000 111000 000
Q ss_pred cEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 164 PAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 164 ~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.........||.||+.++.++..+.++++.++..+|+ ++++||+..
T Consensus 207 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp-~~vyGp~~~ 252 (367)
T PLN02686 207 SFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICP-ALVTGPGFF 252 (367)
T ss_pred hhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcC-CceECCCCC
Confidence 0001112349999999999999887777889999998 678999754
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=134.68 Aligned_cols=168 Identities=15% Similarity=0.133 Sum_probs=116.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH--h---CCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST--L---GKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~--l---~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
++++||||||+||||+++++.|+++ |++|++.+|+.......... + .++++++++|+.|.+.+.++++++|+|
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V 80 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGV 80 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEE
Confidence 4579999999999999999999997 88999999886643322111 1 136789999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHc-CCcE-EEeCCChhH-HH-HH----HhhHHHHHHcCCcE-EecC
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIET-KTAY-IDVCDDTIY-SQ-RA----KSFKDRAIAANIPA-ITTG 169 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~-gv~~-vdis~~~~~-~~-~~----~~~~~~a~~~g~~~-i~~~ 169 (429)
||+|++... .++.+++++|.+. +++. |.+|+...+ +. .. ..++|... ..+. ....
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~--~~p~~~~~~ 158 (322)
T PLN02662 81 FHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWF--SDPAFCEES 158 (322)
T ss_pred EEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccC--CChhHhhcc
Confidence 999986421 1346788888887 7755 455543332 21 10 01122100 0010 0011
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
...|+.+|.+++.++..+.++++.++..+|+ .+.+|+...
T Consensus 159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp-~~v~Gp~~~ 198 (322)
T PLN02662 159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINP-AMVIGPLLQ 198 (322)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCcEEEEeC-CcccCCCCC
Confidence 2459999999999999887778888999998 677888643
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-13 Score=130.27 Aligned_cols=163 Identities=19% Similarity=0.191 Sum_probs=123.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec----CchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc--Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR----NREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R----~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~--~~D 110 (429)
.++||||||+||||++.+-+|+++ |+.|+++|. ..+.+.++...++ .++.+.++|+.|.+.|+++++ ++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd 79 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD 79 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence 478999999999999999999998 899999884 3445555555555 579999999999999999998 799
Q ss_pred EEEecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCcc
Q 014177 111 LVVHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 111 vVi~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~p 173 (429)
.|+|.|+.... .|+.+++++|.+++++++..+++...+... .++.|..... .+-.-|
T Consensus 80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~------~p~~py 153 (343)
T KOG1371|consen 80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTD------QPTNPY 153 (343)
T ss_pred eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCC------CCCCcc
Confidence 99999974321 368999999999998886555554333322 2333332211 122459
Q ss_pred chhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 174 GVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
|.+|.+.+.++..+...++..+..+|. |+.+|..+.
T Consensus 154 g~tK~~iE~i~~d~~~~~~~~~~~LRy-fn~~ga~p~ 189 (343)
T KOG1371|consen 154 GKTKKAIEEIIHDYNKAYGWKVTGLRY-FNVIGAHPS 189 (343)
T ss_pred hhhhHHHHHHHHhhhccccceEEEEEe-ccccCcccc
Confidence 999999999999998877777788887 787774443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-13 Score=127.05 Aligned_cols=181 Identities=23% Similarity=0.272 Sum_probs=129.1
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc--cEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV--DLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~--DvVi~~agp~ 119 (429)
|||+||+||+|+++++.|+++ ++.|+...|+........... ++++..+|+.|.+.+.+++++. |+|||+|+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccccc--eEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 799999999999999999998 788887777766544333222 6899999999999999999855 9999999874
Q ss_pred CC---------------CchHHHHHHHHHcCC-cEEEeCCChhHHHH-HHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 120 QQ---------------APKCTVLEAAIETKT-AYIDVCDDTIYSQR-AKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 120 ~~---------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
.. .++.+++++|.+.++ +++.+++...|... ...+++. .+. .....|+.+|...+.
T Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~-----~~~--~~~~~Y~~~K~~~e~ 149 (236)
T PF01370_consen 77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED-----SPI--NPLSPYGASKRAAEE 149 (236)
T ss_dssp SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT-----SGC--CHSSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccc--ccccccccccccccc
Confidence 21 235788999999998 66767665444322 1111211 111 112349999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCC---CCCccHHHHHHH--HhCCceEEeeCCeE
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTG---GAGPTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~---~~g~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
+++.+.++.+.++..+|+ ...+|+. ......+...+. ..++++.++.+|+.
T Consensus 150 ~~~~~~~~~~~~~~~~R~-~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (236)
T PF01370_consen 150 LLRDYAKKYGLRVTILRP-PNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQ 205 (236)
T ss_dssp HHHHHHHHHTSEEEEEEE-SEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSC
T ss_pred cccccccccccccccccc-cccccccccccccccccchhhHHhhcCCcccccCCCCC
Confidence 999998777888899998 5678988 222334443333 34666777777764
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-13 Score=134.43 Aligned_cols=164 Identities=14% Similarity=0.098 Sum_probs=117.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+|+|||+||+||||+++++.|+++ |++|++.+|+.++.+...... ..+++++++|++|.+++.++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 589999999999999999999997 889998888876544332211 1357889999999999999999999999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHc-CC-cEEEeCCChhHHHHHH------hhHHHHHHcCCcEEe---
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIET-KT-AYIDVCDDTIYSQRAK------SFKDRAIAANIPAIT--- 167 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~-gv-~~vdis~~~~~~~~~~------~~~~~a~~~g~~~i~--- 167 (429)
|+|++... .++.+++++|.+. ++ +.|.+|+...++.... .++|. .+.-+
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~-----~~~~p~~~ 157 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDET-----FFTNPSFA 157 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcC-----CCCchhHh
Confidence 99985321 1356788888875 44 4566665444432110 11111 01101
Q ss_pred -cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 168 -TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 168 -~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.....||.||..++.++..|.++++.++..+|+ ++++|++..
T Consensus 158 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~-~~vyGp~~~ 200 (325)
T PLN02989 158 EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNP-GLVTGPILQ 200 (325)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcC-CceeCCCCC
Confidence 012459999999999999888777888889998 678998764
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-13 Score=133.74 Aligned_cols=168 Identities=15% Similarity=0.114 Sum_probs=117.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.+++|+||||+||||+++++.|+++ |++|++..|+..+.+.+.... ..+++++.+|++|.+++.++++++|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v 81 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV 81 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence 3579999999999999999999997 889998888876544332211 135789999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHc-CCcE-EEeCCChhHH-HHHH-----hhHHHHHHcCCcE-EecC
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIET-KTAY-IDVCDDTIYS-QRAK-----SFKDRAIAANIPA-ITTG 169 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~-gv~~-vdis~~~~~~-~~~~-----~~~~~a~~~g~~~-i~~~ 169 (429)
||+|++... .++.+++++|.+. +++. |.+|+...+. .... .+++... ..+. ....
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~--~~p~~~~~~ 159 (322)
T PLN02986 82 FHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFF--SDPSLCRET 159 (322)
T ss_pred EEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccC--CChHHhhcc
Confidence 999986421 2356788888885 6654 5555444331 1100 0111100 0000 0011
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
...|+.||.+++.++..|.++++.++..+|. .+++|+...
T Consensus 160 ~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp-~~v~Gp~~~ 199 (322)
T PLN02986 160 KNWYPLSKILAENAAWEFAKDNGIDMVVLNP-GFICGPLLQ 199 (322)
T ss_pred ccchHHHHHHHHHHHHHHHHHhCCeEEEEcc-cceeCCCCC
Confidence 2459999999999999988777888889998 567888643
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.5e-13 Score=128.18 Aligned_cols=146 Identities=25% Similarity=0.305 Sum_probs=103.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----C-CCcEE----EEeeCCChHHHHHHhc--Ccc
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----G-KNSEF----AEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~-~~v~~----~~~Dl~d~~~l~~~~~--~~D 110 (429)
||||||+|.||+.++++|++.+| .++++.||++.++-.+..++ + .++.+ +.+|+.|.+.+.++++ ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 79999999999999999999754 58999999999888887776 2 23443 4789999999999999 999
Q ss_pred EEEecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 111 LVVHAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 111 vVi~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
+|||+|+.-+. .|+.+++++|.+++++. |.+|++-.. .|. ..+|
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv---------------~Pt-----nvmG 139 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV---------------NPT-----NVMG 139 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS---------------S-------SHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC---------------CCC-----cHHH
Confidence 99999985432 36899999999999965 566655321 122 4599
Q ss_pred hhHHHHHHHHHHHHhhc---CCCCeEEEEEeeecCCCC
Q 014177 175 VSNVMAAELVRVARNES---KGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~---~~~v~~i~~~~~~~G~~~ 209 (429)
.||.+++.++..+.+.. .-....+|+. |+.|+.+
T Consensus 140 atKrlaE~l~~~~~~~~~~~~t~f~~VRFG-NVlgS~G 176 (293)
T PF02719_consen 140 ATKRLAEKLVQAANQYSGNSDTKFSSVRFG-NVLGSRG 176 (293)
T ss_dssp HHHHHHHHHHHHHCCTSSSS--EEEEEEE--EETTGTT
T ss_pred HHHHHHHHHHHHHhhhCCCCCcEEEEEEec-ceecCCC
Confidence 99999999999877544 2234567763 5666554
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-12 Score=131.43 Aligned_cols=153 Identities=25% Similarity=0.275 Sum_probs=117.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcC-
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRD- 108 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~- 108 (429)
..+.+|+||||||+|.||+.+|+++++.+| .++++.+|++-+.-.+..++. .++.++.+|+.|.+.+.+++++
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~ 324 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH 324 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence 345789999999999999999999999865 489999999988777666554 3467889999999999999997
Q ss_pred -ccEEEecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC
Q 014177 109 -VDLVVHAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 109 -~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~ 171 (429)
+|+|+|+|+.-+. .|+.+++++|.+.|++. |-+|++-.. .|. .
T Consensus 325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV---------------~Pt-----N 384 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV---------------NPT-----N 384 (588)
T ss_pred CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc---------------CCc-----h
Confidence 9999999974432 47899999999999977 455554321 122 4
Q ss_pred ccchhHHHHHHHHHHHHhhcCC---CCeEEEEEeeecCCCC
Q 014177 172 YPGVSNVMAAELVRVARNESKG---EPERLRFSYYTAGTGG 209 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~---~v~~i~~~~~~~G~~~ 209 (429)
.+|.||.+++.++..+.++... ....+|+ -|+-|+.+
T Consensus 385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRF-GNVlGSrG 424 (588)
T COG1086 385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRF-GNVLGSRG 424 (588)
T ss_pred HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEe-cceecCCC
Confidence 4999999999999988653332 3345555 24455444
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-12 Score=126.89 Aligned_cols=186 Identities=19% Similarity=0.228 Sum_probs=123.1
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhcC--ccEEEec
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALRD--VDLVVHA 115 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi~~ 115 (429)
+|+||||+|++|+++++.|++++++++|++.+|.. .+.+.+.... ..+++++.+|++|.+++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999874347888887632 1112221111 13578899999999999999986 9999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHc--CCcEEEeCCChhHHHHHH--hhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQ---------------APKCTVLEAAIET--KTAYIDVCDDTIYSQRAK--SFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~--gv~~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
|+.... .+..+++++|.+. +++++.+|+...|..... .+.+. .+. .....||.+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~-----~~~--~~~~~Y~~s 153 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTET-----TPL--APSSPYSAS 153 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCC-----CCC--CCCCchHHH
Confidence 986431 1245788889886 446777776544321100 11111 111 112459999
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeCCeE
Q 014177 177 NVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNKGEE 234 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~G~~ 234 (429)
|..++.+++.+.++.+.++..+|. ...+|+.......+...+.. .+.++.++.+|+.
T Consensus 154 K~~~e~~~~~~~~~~~~~~~i~R~-~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 212 (317)
T TIGR01181 154 KAASDHLVRAYHRTYGLPALITRC-SNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQ 212 (317)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEe-ccccCCCCCcccHHHHHHHHHhcCCCceEeCCCce
Confidence 999999999887777888889998 45688875444444443332 2345566666653
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=128.09 Aligned_cols=189 Identities=16% Similarity=0.175 Sum_probs=120.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCc--hhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNR--EKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~--~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|+|+||||+||||+++++.|+++ +.+ ++..++.. ...+.+.... ..++.++.+|++|.+++.++++ ++|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN--TQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh--CCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 47999999999999999999997 544 55555432 1222222111 1346788999999999999887 489999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHc---------CC-cEEEeCCChhHHHHH--HhhHH-----HHHHc
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIET---------KT-AYIDVCDDTIYSQRA--KSFKD-----RAIAA 161 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~---------gv-~~vdis~~~~~~~~~--~~~~~-----~a~~~ 161 (429)
|||+.... .++.+++++|.+. ++ ++|.+|+...|.... ....+ ...+.
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~ 158 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET 158 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence 99985421 1467889999874 33 466776655442210 00000 00001
Q ss_pred CCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeCCeE
Q 014177 162 NIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNKGEE 234 (429)
Q Consensus 162 g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~G~~ 234 (429)
.+. .....||.||..++.+++.+.++++.++..+|+ ..++|++......+...+.. .+.++.++.+|+.
T Consensus 159 -~~~--~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~-~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 229 (352)
T PRK10084 159 -TAY--APSSPYSASKASSDHLVRAWLRTYGLPTIVTNC-SNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQ 229 (352)
T ss_pred -CCC--CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEec-cceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCe
Confidence 111 223469999999999999887777888888888 56789875433333333222 2445666666653
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-12 Score=127.55 Aligned_cols=159 Identities=20% Similarity=0.172 Sum_probs=117.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc-cEEEecCCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV-DLVVHAAGPF 119 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~-DvVi~~agp~ 119 (429)
+||||||+||||+++++.|.++ |++|+..+|...+..... ..+.++.+|++|.+.+.+.++.+ |+|||+|+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~ 75 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPLL----SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQS 75 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccccc----cccceeeecccchHHHHHHHhcCCCEEEEccccC
Confidence 4999999999999999999997 899999999776544322 35788999999988888888888 9999999754
Q ss_pred CC----------------CchHHHHHHHHHcCCcEEEeCCChh-HHHHHH--hhHHHHHHcCCcEEecCCCccchhHHHH
Q 014177 120 QQ----------------APKCTVLEAAIETKTAYIDVCDDTI-YSQRAK--SFKDRAIAANIPAITTGGIYPGVSNVMA 180 (429)
Q Consensus 120 ~~----------------~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s~~~a 180 (429)
.. .++.+++++|.+.+++.+..+++.. ++.... .+.|.. .+..+.. .||.||+.+
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~--~Yg~sK~~~ 149 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLN--PYGVSKLAA 149 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCC--HHHHHHHHH
Confidence 31 1367889999998887765554432 222100 122211 1222222 699999999
Q ss_pred HHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc
Q 014177 181 AELVRVARNESKGEPERLRFSYYTAGTGGAGP 212 (429)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~ 212 (429)
+.++..+.+..+.++..+|.. ..+|++....
T Consensus 150 E~~~~~~~~~~~~~~~ilR~~-~vyGp~~~~~ 180 (314)
T COG0451 150 EQLLRAYARLYGLPVVILRPF-NVYGPGDKPD 180 (314)
T ss_pred HHHHHHHHHHhCCCeEEEeee-eeeCCCCCCC
Confidence 999999887677889999985 6789886553
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.5e-12 Score=116.97 Aligned_cols=157 Identities=17% Similarity=0.228 Sum_probs=109.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
..+|.++||||++.||.++++.|.+. |++|++++|+.+++++++.+++ ..+....+|++|.++++++++ +
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEA--GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCc
Confidence 45688999999999999999999997 8999999999999999999997 478899999999988666654 7
Q ss_pred ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHH-HHHHcCCcEEecC---------CCccchhHH
Q 014177 109 VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKD-RAIAANIPAITTG---------GIYPGVSNV 178 (429)
Q Consensus 109 ~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~-~a~~~g~~~i~~~---------g~~pG~s~~ 178 (429)
+|++||+||.... .++.++-.+.--..+|++-..-++....-+.. ..+..|..+.+++ |..|+.||+
T Consensus 82 iDiLvNNAGl~~g---~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~ 158 (246)
T COG4221 82 IDILVNNAGLALG---DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA 158 (246)
T ss_pred ccEEEecCCCCcC---ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence 9999999997643 23333333333333433322222222222222 2233443333332 344999999
Q ss_pred HHHHHHHHHHhhcCCCCeEEEE
Q 014177 179 MAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
+...+.+.++++.... .||+
T Consensus 159 aV~~fs~~LR~e~~g~--~IRV 178 (246)
T COG4221 159 AVRAFSLGLRQELAGT--GIRV 178 (246)
T ss_pred HHHHHHHHHHHHhcCC--CeeE
Confidence 9999999888765433 4554
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.9e-12 Score=120.56 Aligned_cols=82 Identities=18% Similarity=0.281 Sum_probs=72.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC----CcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK----NSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~----~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++++++||||++.||..+++.|+++ |++|+++.|+.+++.++++++.. .++++.+|++|.+++..+.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~ 80 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARR--GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE 80 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence 367889999999999999999999998 89999999999999999988863 35889999999998887664
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
.+|++|||||..
T Consensus 81 ~~~~IdvLVNNAG~g 95 (265)
T COG0300 81 RGGPIDVLVNNAGFG 95 (265)
T ss_pred cCCcccEEEECCCcC
Confidence 599999999854
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-12 Score=125.93 Aligned_cols=163 Identities=20% Similarity=0.278 Sum_probs=111.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH----HHHHHH---hCCCcEEEEeeCCChHHHHHHhc-
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG----AAMVST---LGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~----~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+|++++|+|+||+|++|+++++.|+++ +++|++.+|..... ..+... ...++.++.+|++|.+.+.++++
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~ 79 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS 79 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh
Confidence 467789999999999999999999997 78999998753221 222221 12357889999999999988886
Q ss_pred -CccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH-HHhhHHHHHHcCCcEEecC
Q 014177 108 -DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR-AKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 108 -~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~ 169 (429)
++|+|||||+.... .++.+++++|.+.+++ +|.+++...|... ...++|. .+. ..
T Consensus 80 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~--~~ 152 (352)
T PLN02240 80 TRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPL--SA 152 (352)
T ss_pred CCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCC--CC
Confidence 68999999974321 1346788999888875 5666654333211 0112111 111 12
Q ss_pred CCccchhHHHHHHHHHHHHhh-cCCCCeEEEEEeeecCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNE-SKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~-~~~~v~~i~~~~~~~G~~ 208 (429)
...||.+|..++.+++.+.++ ...++..+|+ ++.+|+.
T Consensus 153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~-~~v~G~~ 191 (352)
T PLN02240 153 TNPYGRTKLFIEEICRDIHASDPEWKIILLRY-FNPVGAH 191 (352)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEee-cCcCCCC
Confidence 245999999999999877543 3456677887 6777764
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.5e-12 Score=119.38 Aligned_cols=149 Identities=22% Similarity=0.326 Sum_probs=110.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+|||+|++|.+|+.+++.|. . +++|+..+|.. +|++|++.+.++++ ++|+|||||+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~~------------------~Ditd~~~v~~~i~~~~PDvVIn~AA 59 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G--EFEVIATDRAE------------------LDITDPDAVLEVIRETRPDVVINAAA 59 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C--CceEEeccCcc------------------ccccChHHHHHHHHhhCCCEEEECcc
Confidence 349999999999999999997 2 67888877642 79999999999988 6899999997
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .+..+++++|.+.|..+|.+|++..|-... .++.|.-.. .|+ ..||.||++.+
T Consensus 60 yt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~--~P~-----nvYG~sKl~GE 132 (281)
T COG1091 60 YTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTP--NPL-----NVYGRSKLAGE 132 (281)
T ss_pred ccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCC--CCh-----hhhhHHHHHHH
Confidence 5432 246899999999999999999887664433 234332111 122 45999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHHhC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLG 223 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~~~ 223 (429)
..++.+ .+....+|.++ .+|..+ ...+.++++...
T Consensus 133 ~~v~~~----~~~~~I~Rtsw-v~g~~g--~nFv~tml~la~ 167 (281)
T COG1091 133 EAVRAA----GPRHLILRTSW-VYGEYG--NNFVKTMLRLAK 167 (281)
T ss_pred HHHHHh----CCCEEEEEeee-eecCCC--CCHHHHHHHHhh
Confidence 999853 46777889865 466544 234445555443
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.2e-11 Score=118.48 Aligned_cols=167 Identities=13% Similarity=0.087 Sum_probs=112.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHh---CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTL---GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+++|+||||+|+||+++++.|+++ |++|++.+|+..+ .......+ +.+++++++|++|.+++.+++.++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 468999999999999999999997 8999999986432 22222222 2357889999999999999999999999
Q ss_pred ecCCCCCC-------------CchHHHHHHHHHc-CCcE-EEeCCChhHH-H-HH----HhhHHHHHHcCCcEEecCCCc
Q 014177 114 HAAGPFQQ-------------APKCTVLEAAIET-KTAY-IDVCDDTIYS-Q-RA----KSFKDRAIAANIPAITTGGIY 172 (429)
Q Consensus 114 ~~agp~~~-------------~~~~~v~~aa~~~-gv~~-vdis~~~~~~-~-~~----~~~~~~a~~~g~~~i~~~g~~ 172 (429)
|++++... .++.+++++|.+. ++.. |.+++...+. . .. ..+++..- ............
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~~ 162 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSW-SDQNFCRKFKLW 162 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccC-CCHHHHhhcccH
Confidence 98764321 2568889999886 4554 5555443321 1 00 01111100 000000001125
Q ss_pred cchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 173 PGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
|+.||.+++.++..+.++.+.++..++. ..++|++.
T Consensus 163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp-~~v~Gp~~ 198 (297)
T PLN02583 163 HALAKTLSEKTAWALAMDRGVNMVSINA-GLLMGPSL 198 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEcC-CcccCCCC
Confidence 9999999999998887666778888888 45678764
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.2e-11 Score=120.42 Aligned_cols=160 Identities=24% Similarity=0.340 Sum_probs=107.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH---HHh-CCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV---STL-GKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~---~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|+|+|+||+|++|+++++.|+++ +++|++.+|......... ..+ +.++.++.+|++|.+.+.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 57999999999999999999997 789998876433222111 112 2346788999999999988886 699999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchh
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
|+|+.... .+..+++++|.+.+++. |.+++...|.... ..++|. .+. ......|+.+
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~-----~~~-~~p~~~Y~~s 152 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVES-----FPT-GTPQSPYGKS 152 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccc-----cCC-CCCCChhHHH
Confidence 99974321 13467889999988865 4445433332110 012111 010 0123459999
Q ss_pred HHHHHHHHHHHHhhc-CCCCeEEEEEeeecCCC
Q 014177 177 NVMAAELVRVARNES-KGEPERLRFSYYTAGTG 208 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~-~~~v~~i~~~~~~~G~~ 208 (429)
|..++.+++.+.++. ..++..+|+ ++.+|+.
T Consensus 153 K~~~E~~~~~~~~~~~~~~~~ilR~-~~v~g~~ 184 (338)
T PRK10675 153 KLMVEQILTDLQKAQPDWSIALLRY-FNPVGAH 184 (338)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEe-eeecCCC
Confidence 999999998876543 456778897 5677764
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.6e-12 Score=122.39 Aligned_cols=160 Identities=18% Similarity=0.137 Sum_probs=114.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|+||+|++|+++++.|+++ +++|++.+|+.++...+. ...++++++|+.|.+++.++++++|+|||+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 47999999999999999999997 789999999876543322 1257899999999999999999999999999753
Q ss_pred CC-------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHH--HhhHHHHHHcCCcEEec-CCCccchhHHHHHH
Q 014177 120 QQ-------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRA--KSFKDRAIAANIPAITT-GGIYPGVSNVMAAE 182 (429)
Q Consensus 120 ~~-------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~-~g~~pG~s~~~a~~ 182 (429)
.. .++.+++++|.+.++.. |.+++...|.... ..+.+. .+..+. .-..|+.+|..++.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~~~~~~~~Y~~sK~~~e~ 150 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADET-----TPSSLDDMIGHYKRSKFLAEQ 150 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCcc-----CCCCcccccChHHHHHHHHHH
Confidence 21 13467888999888754 5555444332111 011111 111111 11348999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+++.+.++++.++..+|. .+.+|++..
T Consensus 151 ~~~~~~~~~~~~~~ilR~-~~~~G~~~~ 177 (328)
T TIGR03466 151 AALEMAAEKGLPVVIVNP-STPIGPRDI 177 (328)
T ss_pred HHHHHHHhcCCCEEEEeC-CccCCCCCC
Confidence 999887666778888887 567887754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.2e-12 Score=123.97 Aligned_cols=152 Identities=17% Similarity=0.272 Sum_probs=98.6
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh---HH-HHHHh-----cCccEE
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE---GS-LLMAL-----RDVDLV 112 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~---~~-l~~~~-----~~~DvV 112 (429)
|+||||+||||+++++.|++. |++++++.|+........ ....+|+.|. ++ +.+++ .++|+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V 72 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFV-------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI 72 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchHHH-------hhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence 899999999999999999997 776555544433221111 1123445443 33 33333 269999
Q ss_pred EecCCCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHH
Q 014177 113 VHAAGPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 113 i~~agp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
||||+.... .++.+++++|.+.+++.|.+|+...|..... ..++ . .+. ..-..||.||.
T Consensus 73 ih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E----~-~~~--~p~~~Y~~sK~ 145 (308)
T PRK11150 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEE----R-EYE--KPLNVYGYSKF 145 (308)
T ss_pred EECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCcc----C-CCC--CCCCHHHHHHH
Confidence 999963211 1356899999999998777776655432111 1111 1 111 11235999999
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 179 MAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.++.+++.+..+.+.++..+|+ .+.+|+++.
T Consensus 146 ~~E~~~~~~~~~~~~~~~~lR~-~~vyG~~~~ 176 (308)
T PRK11150 146 LFDEYVRQILPEANSQICGFRY-FNVYGPREG 176 (308)
T ss_pred HHHHHHHHHHHHcCCCEEEEee-eeecCCCCC
Confidence 9999999887667788899998 578998753
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.9e-11 Score=114.70 Aligned_cols=165 Identities=15% Similarity=0.097 Sum_probs=111.7
Q ss_pred CccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCC-cEEEEeeCCChHHHHHH
Q 014177 31 AHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKN-SEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 31 ~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~-v~~~~~Dl~d~~~l~~~ 105 (429)
.-+.+.+.+|.|+||||+..||.++|..|+++ |.+++++.|+.++++.+.+++ ... +..+++|++|.+++.++
T Consensus 4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~ 81 (282)
T KOG1205|consen 4 NLFMERLAGKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKF 81 (282)
T ss_pred cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHH
Confidence 34567789999999999999999999999998 888888888887777775443 234 88999999999998866
Q ss_pred h-------cCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHc-CCcEEecCC-------
Q 014177 106 L-------RDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAA-NIPAITTGG------- 170 (429)
Q Consensus 106 ~-------~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~-g~~~i~~~g------- 170 (429)
+ .++|++||+||.... + .+-..-.+.-.+.+|++-....+-....+....+.+ |-.+++++-
T Consensus 82 ~~~~~~~fg~vDvLVNNAG~~~~-~--~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 82 VEWAIRHFGRVDVLVNNAGISLV-G--FLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred HHHHHHhcCCCCEEEecCccccc-c--ccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 5 389999999997652 1 111111111112334432222222222333333333 666665532
Q ss_pred --CccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 171 --IYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 171 --~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
..|..||.+...+.+.+++|+......+++
T Consensus 159 ~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i 190 (282)
T KOG1205|consen 159 FRSIYSASKHALEGFFETLRQELIPLGTIIII 190 (282)
T ss_pred cccccchHHHHHHHHHHHHHHHhhccCceEEE
Confidence 258899999999999999887766655654
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.5e-12 Score=121.54 Aligned_cols=158 Identities=20% Similarity=0.289 Sum_probs=105.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|||||+|++|++|+++.+.|.++ +++++..+|+ .+|+.|.+++.+.++ ++|+|||||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa 60 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRS------------------DLDLTDPEAVAKLLEAFKPDVVINCAA 60 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence 68999999999999999999986 7888888765 579999999999887 6999999997
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .+...++++|.+.|+++|.+|++..|..... ++.|.... ..-..||-+|+.++
T Consensus 61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~-------~P~~~YG~~K~~~E 133 (286)
T PF04321_consen 61 YTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPP-------NPLNVYGRSKLEGE 133 (286)
T ss_dssp ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS-----------SSHHHHHHHHHH
T ss_pred eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCC-------CCCCHHHHHHHHHH
Confidence 5421 2356889999999999999998877754322 34443211 12255999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNK 231 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~ 231 (429)
..++. .......+|..+ .+|+. +...+.+.+.. .++++.+..|
T Consensus 134 ~~v~~----~~~~~~IlR~~~-~~g~~--~~~~~~~~~~~~~~~~~i~~~~d 178 (286)
T PF04321_consen 134 QAVRA----ACPNALILRTSW-VYGPS--GRNFLRWLLRRLRQGEPIKLFDD 178 (286)
T ss_dssp HHHHH----H-SSEEEEEE-S-EESSS--SSSHHHHHHHHHHCTSEEEEESS
T ss_pred HHHHH----hcCCEEEEecce-ecccC--CCchhhhHHHHHhcCCeeEeeCC
Confidence 99875 345778999864 47763 33455555543 3444444443
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-11 Score=118.73 Aligned_cols=99 Identities=20% Similarity=0.188 Sum_probs=80.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|+||+||+|+++++.|+++ |++|++.+|+.++...+.. .+++++.+|++|++++.++++++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKASFLKE---WGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHhhhHhh---cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 48999999999999999999997 8999999998766543322 368999999999999999999999999998643
Q ss_pred CC----------CchHHHHHHHHHcCCcE-EEeCC
Q 014177 120 QQ----------APKCTVLEAAIETKTAY-IDVCD 143 (429)
Q Consensus 120 ~~----------~~~~~v~~aa~~~gv~~-vdis~ 143 (429)
.. .++.+++++|.++|++. |.+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 21 13468899999999865 44443
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.1e-11 Score=116.51 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++|||||+|+||+++++.|+++ |++|++++|+.+++++..+++. .++.++.+|++|.++++++++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8999999999887777665542 356779999999998888776
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 82 g~id~vi~~Ag~~~ 95 (287)
T PRK06194 82 GAVHLLFNNAGVGA 95 (287)
T ss_pred CCCCEEEECCCCCC
Confidence 4799999998643
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.7e-11 Score=113.68 Aligned_cols=192 Identities=19% Similarity=0.213 Sum_probs=141.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec---CchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--CccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR---NREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--DVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R---~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--~~Dv 111 (429)
..++++|+||+||||+..+..+....|+.+++..|. ... ++.+.+... ++.++++.|+.+...+..++. .+|.
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 348999999999999999999999888888777653 111 222222211 578999999999887777665 7999
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcC-C-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETK-T-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~g-v-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
|+|.|+..+. .++..+++++...| + +++.+|++..|...-...... ++ . .+.....|.
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~--E~-s--~~nPtnpyA 158 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVG--EA-S--LLNPTNPYA 158 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccc--cc-c--cCCCCCchH
Confidence 9999975432 24678899999885 3 458889888776432211110 11 1 123346689
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHH--HHHHhCCceEEeeCCeEEE
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILAT--SFLLLGEEVVAYNKGEEIT 236 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~--~~~~~~~~~~v~~~G~~~~ 236 (429)
.||+.++.+.+.|.++++.++..+|. -++|||++....+++- .+.+.+.+..+.++|..++
T Consensus 159 asKaAaE~~v~Sy~~sy~lpvv~~R~-nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~r 221 (331)
T KOG0747|consen 159 ASKAAAEMLVRSYGRSYGLPVVTTRM-NNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTR 221 (331)
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEec-cCccCCCcChHHHhHHHHHHHHhCCCcceecCcccce
Confidence 99999999999999999999999998 5899999987666653 3346688899999998664
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.9e-10 Score=116.15 Aligned_cols=104 Identities=20% Similarity=0.226 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH------HHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA------AMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~------~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
..+++|+|+||+|+||+++++.|+++ |++|++.+|+..+.+ ..... ..+++++++|++|.+++.++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~~ 134 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKE-LPGAEVVFGDVTDADSLRKVLFSEG 134 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhh-cCCceEEEeeCCCHHHHHHHHHHhC
Confidence 35689999999999999999999997 899999999876432 11111 2468899999999999999888
Q ss_pred -CccEEEecCCCCCC----------CchHHHHHHHHHcCCc-EEEeCC
Q 014177 108 -DVDLVVHAAGPFQQ----------APKCTVLEAAIETKTA-YIDVCD 143 (429)
Q Consensus 108 -~~DvVi~~agp~~~----------~~~~~v~~aa~~~gv~-~vdis~ 143 (429)
++|+||||+++... .++.+++++|.+.|++ +|.+|+
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 59999999875321 1346788999999886 455554
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=6e-11 Score=116.17 Aligned_cols=169 Identities=20% Similarity=0.166 Sum_probs=113.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.++.+++||||+||+|+++++.|.++....+|.++|..+.......+.. ..+++..++|+.|...+.+++.++ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 3567899999999999999999999855689999998765322222222 357899999999999999999999 777
Q ss_pred ecCC-CCCC--------------CchHHHHHHHHHcCCcEE-EeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 114 HAAG-PFQQ--------------APKCTVLEAAIETKTAYI-DVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 114 ~~ag-p~~~--------------~~~~~v~~aa~~~gv~~v-dis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
|||. +... .|+.+++++|.+.|++.+ .+|+........ .....-+....+. .---.|+-||
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~-~~~n~~E~~p~p~--~~~d~Y~~sK 157 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGE-PIINGDESLPYPL--KHIDPYGESK 157 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCe-ecccCCCCCCCcc--ccccccchHH
Confidence 7763 3211 367899999999999885 444333221111 0000000111221 0002499999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
..++.++.............+|.. ..||++..
T Consensus 158 a~aE~~Vl~an~~~~l~T~aLR~~-~IYGpgd~ 189 (361)
T KOG1430|consen 158 ALAEKLVLEANGSDDLYTCALRPP-GIYGPGDK 189 (361)
T ss_pred HHHHHHHHHhcCCCCeeEEEEccc-cccCCCCc
Confidence 999999987653222345678874 46898864
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.2e-10 Score=111.74 Aligned_cols=79 Identities=13% Similarity=0.180 Sum_probs=68.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~Dv 111 (429)
.|++|||||+|+||+++++.|+++ |++|++.+|+.++++.+.+..+.++.++++|++|.+++.++++ ++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 478999999999999999999997 7899999999988887776655678899999999998877654 5899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
||||+|..
T Consensus 80 vi~~ag~~ 87 (276)
T PRK06482 80 VVSNAGYG 87 (276)
T ss_pred EEECCCCC
Confidence 99999864
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.2e-11 Score=111.59 Aligned_cols=81 Identities=23% Similarity=0.348 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++.+.+.+.++.++.++++|++|.+++.++++ ++
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 7899999998887777666555567889999999988766544 47
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 86 d~li~~ag~~ 95 (255)
T PRK05717 86 DALVCNAAIA 95 (255)
T ss_pred CEEEECCCcc
Confidence 9999999854
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.3e-10 Score=111.70 Aligned_cols=82 Identities=22% Similarity=0.319 Sum_probs=70.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++.+++.+.+. .++.++++|++|.+++.++++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 467889999999999999999999997 8999999998877777666553 357889999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 93 g~id~li~~Ag~~ 105 (280)
T PLN02253 93 GTLDIMVNNAGLT 105 (280)
T ss_pred CCCCEEEECCCcC
Confidence 689999999853
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.3e-10 Score=107.16 Aligned_cols=81 Identities=16% Similarity=0.181 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+..+.++..+++|+.|.+++.++++ ++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI 80 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 8999999999888887766554567889999999887776664 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++|||||..
T Consensus 81 d~li~~Ag~~ 90 (262)
T TIGR03325 81 DCLIPNAGIW 90 (262)
T ss_pred CEEEECCCCC
Confidence 9999999864
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.9e-11 Score=114.54 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=101.4
Q ss_pred EEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCCCCC
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAGPFQ 120 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~agp~~ 120 (429)
|||||+||||+++++.|.+. +++++++.+. ..+|+.|.++++++++ ++|+|||||+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~-----------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~ 61 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTH-----------------KELDLTRQADVEAFFAKEKPTYVILAAAKVG 61 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeecc-----------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence 69999999999999999987 6776655321 2479999999998877 5799999997532
Q ss_pred C----------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH-HHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 121 Q----------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR-AKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 121 ~----------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
. .++.+++++|.+.+++ +|.+++...|... ..+.+|.....+ +.-+ ....|+.||.+++.
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~-~~~p-~~~~Y~~sK~~~e~ 139 (306)
T PLN02725 62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTG-PPEP-TNEWYAIAKIAGIK 139 (306)
T ss_pred ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccC-CCCC-CcchHHHHHHHHHH
Confidence 0 1467899999999975 6666665444321 112333221111 1101 12249999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+++.+.+++..++..+|+ ...+|++.
T Consensus 140 ~~~~~~~~~~~~~~~~R~-~~vyG~~~ 165 (306)
T PLN02725 140 MCQAYRIQYGWDAISGMP-TNLYGPHD 165 (306)
T ss_pred HHHHHHHHhCCCEEEEEe-cceeCCCC
Confidence 998887777888889998 56788864
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.7e-10 Score=108.55 Aligned_cols=152 Identities=17% Similarity=0.150 Sum_probs=99.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+.++.++.++++|++|.++++++++ ++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAE--GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 56789999999999999999999997 8999999999988888877766668889999999988877664 58
Q ss_pred cEEEecCCCCCCCc-----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC---------CCccch
Q 014177 110 DLVVHAAGPFQQAP-----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG---------GIYPGV 175 (429)
Q Consensus 110 DvVi~~agp~~~~~-----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~---------g~~pG~ 175 (429)
|++||++|...... ...-.+...+ +.++++-...+......+....+..|..+.+++ ...|+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 158 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFD---EIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTA 158 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHH---HHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHH
Confidence 99999998643110 0011110011 122332222221111111111122333333332 124899
Q ss_pred hHHHHHHHHHHHHhhcCC
Q 014177 176 SNVMAAELVRVARNESKG 193 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~ 193 (429)
+|.....+++.+..++..
T Consensus 159 sK~a~~~~~~~la~el~~ 176 (263)
T PRK06200 159 SKHAVVGLVRQLAYELAP 176 (263)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999888877654
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.9e-11 Score=122.61 Aligned_cols=173 Identities=14% Similarity=0.114 Sum_probs=111.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchh---HHHHH-------------HHh--------CCCc
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREK---GAAMV-------------STL--------GKNS 89 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~---~~~l~-------------~~l--------~~~v 89 (429)
+.+++++|+|||||||+|+++++.|++.+++. +|.+..|.... .+++. +.. ..++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 45788999999999999999999998765544 68888886531 11111 101 1468
Q ss_pred EEEEeeCC-------ChHHHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHc-CCc-EEEeCCChhHH
Q 014177 90 EFAEVNIY-------NEGSLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIET-KTA-YIDVCDDTIYS 148 (429)
Q Consensus 90 ~~~~~Dl~-------d~~~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~-gv~-~vdis~~~~~~ 148 (429)
.++.+|++ |.+.++++++++|+|||+|+.... .++.+++++|.+. +++ .+.+|+...|.
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG 166 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG 166 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence 89999998 445577788899999999975432 2567889999885 554 45555443321
Q ss_pred HHH---------------------------------Hh-----hHHHHH-----HcCCc--EEecCCCccchhHHHHHHH
Q 014177 149 QRA---------------------------------KS-----FKDRAI-----AANIP--AITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 149 ~~~---------------------------------~~-----~~~~a~-----~~g~~--~i~~~g~~pG~s~~~a~~~ 183 (429)
... .. .++... +-|.. ...+-...|+.||.+++++
T Consensus 167 ~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~l 246 (491)
T PLN02996 167 EKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEML 246 (491)
T ss_pred CCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHH
Confidence 100 00 000000 00100 0122234599999999999
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+..+.. +.++..+|. ++++|+...
T Consensus 247 v~~~~~--~lpv~i~RP-~~V~G~~~~ 270 (491)
T PLN02996 247 LGNFKE--NLPLVIIRP-TMITSTYKE 270 (491)
T ss_pred HHHhcC--CCCEEEECC-CEeccCCcC
Confidence 987753 678889998 677887653
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=103.22 Aligned_cols=95 Identities=26% Similarity=0.388 Sum_probs=81.2
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
|+|+||+|++|+.+++.|+++ +++|++..|++++.+. ..+++++++|+.|.+++.++++++|+||+++++...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhccc-----ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence 799999999999999999998 7999999999998776 367999999999999999999999999999986443
Q ss_pred --CchHHHHHHHHHcCCcEE-EeCC
Q 014177 122 --APKCTVLEAAIETKTAYI-DVCD 143 (429)
Q Consensus 122 --~~~~~v~~aa~~~gv~~v-dis~ 143 (429)
.....++++|.+.|++.+ .+++
T Consensus 74 ~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 74 DVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred cccccccccccccccccccceeeec
Confidence 123678888999998664 4443
|
... |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.2e-10 Score=111.15 Aligned_cols=83 Identities=20% Similarity=0.311 Sum_probs=70.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc--
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.++++++++||||+++||.++++.|+++ |++|++++|+.+++++..+++. .++.++++|+.|.++++++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~ 87 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL 87 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 4577899999999999999999999997 8999999999888776655442 257889999999998887765
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 88 ~~~~~~iD~li~nAG~~ 104 (313)
T PRK05854 88 RAEGRPIHLLINNAGVM 104 (313)
T ss_pred HHhCCCccEEEECCccc
Confidence 489999999864
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.4e-10 Score=105.23 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.+++.++++ ++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAE--GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 7899999999888877777766667889999999887655443 68
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 82 d~vi~~ag~~ 91 (249)
T PRK06500 82 DAVFINAGVA 91 (249)
T ss_pred CEEEECCCCC
Confidence 9999999854
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.5e-10 Score=108.36 Aligned_cols=81 Identities=12% Similarity=0.220 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|++|+++++.|+++ |++|++++|+.++.+++.+.+..++.++++|++|.+++.++++ ++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 55689999999999999999999997 8999999999998888777666568889999999998887765 58
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||++|..
T Consensus 82 d~li~~ag~~ 91 (257)
T PRK07067 82 DILFNNAALF 91 (257)
T ss_pred CEEEECCCcC
Confidence 9999999854
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2e-10 Score=123.74 Aligned_cols=162 Identities=19% Similarity=0.135 Sum_probs=106.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHhC-CCcEEEEeeCCCh------HHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTLG-KNSEFAEVNIYNE------GSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l~-~~v~~~~~Dl~d~------~~l~~~~~~~D 110 (429)
|+||||||+||||+++++.|++...+++|++.+|+... ++.+..... .+++++.+|++|. +.++++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 47999999999999999999952237899999996532 223322222 4688999999983 456655 8999
Q ss_pred EEEecCCCCCC------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 111 LVVHAAGPFQQ------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 111 vVi~~agp~~~------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
+|||||+.... .++.+++++|.+.+++. +.+|+...+......+.+...... ......|+.||
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~----~~~~~~Y~~sK 155 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEG----QGLPTPYHRTK 155 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhh----cCCCCchHHHH
Confidence 99999985431 24678899999987655 555544433211111111100000 01123499999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+.++.++.. ..+.++..+|. .+.+|+...
T Consensus 156 ~~~E~~~~~---~~g~~~~ilRp-~~v~G~~~~ 184 (657)
T PRK07201 156 FEAEKLVRE---ECGLPWRVYRP-AVVVGDSRT 184 (657)
T ss_pred HHHHHHHHH---cCCCcEEEEcC-CeeeecCCC
Confidence 999998864 34667888898 456786543
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.6e-10 Score=106.44 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=69.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+....++..+++|++|.+++.++++ ++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999999999999999999997 8999999999988877766554567889999999998887766 589
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+||||+|..
T Consensus 81 ~vv~~ag~~ 89 (277)
T PRK06180 81 VLVNNAGYG 89 (277)
T ss_pred EEEECCCcc
Confidence 999999864
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.9e-10 Score=111.28 Aligned_cols=158 Identities=21% Similarity=0.260 Sum_probs=105.7
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
+|+|+||+|++|+.+++.|+++ +++|++.+|............. .+++.+.+|+.|.+++.++++ ++|+||||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 5899999999999999999997 7888888764332111111111 146788999999999998886 699999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|.... .+..+++++|.+.++.. +.+++...|..... .+.+. .+ ......|+.+|..
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-----~~--~~~~~~y~~sK~~ 151 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-----SP--LGPINPYGRSKLM 151 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-----CC--CCCCCchHHHHHH
Confidence 85421 13467788898888654 44444332211100 11111 01 1122459999999
Q ss_pred HHHHHHHHHhh-cCCCCeEEEEEeeecCCC
Q 014177 180 AAELVRVARNE-SKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 180 a~~~~~~~~~~-~~~~v~~i~~~~~~~G~~ 208 (429)
++.+++.+.++ ...++..+|. +..+|+.
T Consensus 152 ~e~~~~~~~~~~~~~~~~ilR~-~~v~g~~ 180 (328)
T TIGR01179 152 SERILRDLSKADPGLSYVILRY-FNVAGAD 180 (328)
T ss_pred HHHHHHHHHHhccCCCEEEEec-CcccCCC
Confidence 99999887655 5667788887 5667865
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=109.95 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|++++|+|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+.++..+.++++|++|.+++.++++ ++
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALER--GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34678999999999999999999987 7899999999988887776665567888999999988877655 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||+|..
T Consensus 79 d~vi~~ag~~ 88 (275)
T PRK08263 79 DIVVNNAGYG 88 (275)
T ss_pred CEEEECCCCc
Confidence 9999999864
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-10 Score=112.38 Aligned_cols=155 Identities=17% Similarity=0.211 Sum_probs=103.2
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh----cCccEEEecC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL----RDVDLVVHAA 116 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~----~~~DvVi~~a 116 (429)
|||+||+||+|+++++.|.++ ++ +|++.+|.... ..+.+ +. ...+..|+.+.+.++.+. .++|+|||||
T Consensus 1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~-~~~~~-~~--~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A 74 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDG-HKFLN-LA--DLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG 74 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCc-hhhhh-hh--heeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence 689999999999999999997 65 78888765432 12211 11 134667888877776665 3799999999
Q ss_pred CCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 117 GPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 117 gp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
+.... .++.+++++|.+.+++.|.+|+...|......+.+. . .+ ......||.+|..++.+
T Consensus 75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~---~-~~--~~p~~~Y~~sK~~~e~~ 148 (314)
T TIGR02197 75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREG---R-EL--ERPLNVYGYSKFLFDQY 148 (314)
T ss_pred cccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccc---c-Cc--CCCCCHHHHHHHHHHHH
Confidence 85321 235678999999999888888765543211122221 0 00 11224599999999999
Q ss_pred HHHHHhh-c-CCCCeEEEEEeeecCCCC
Q 014177 184 VRVARNE-S-KGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 184 ~~~~~~~-~-~~~v~~i~~~~~~~G~~~ 209 (429)
++.+..+ . ...+..+|+ ...+|++.
T Consensus 149 ~~~~~~~~~~~~~~~~lR~-~~vyG~~~ 175 (314)
T TIGR02197 149 VRRRVLPEALSAQVVGLRY-FNVYGPRE 175 (314)
T ss_pred HHHHhHhhccCCceEEEEE-eeccCCCC
Confidence 8865322 2 336778888 56788874
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-10 Score=110.11 Aligned_cols=162 Identities=16% Similarity=0.117 Sum_probs=92.3
Q ss_pred EEcCChHHHHHHHHHHhHcCCCceEEEEecCchh---HHHHHHH-------------hCCCcEEEEeeCCCh------HH
Q 014177 44 VLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK---GAAMVST-------------LGKNSEFAEVNIYNE------GS 101 (429)
Q Consensus 44 V~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~---~~~l~~~-------------l~~~v~~~~~Dl~d~------~~ 101 (429)
|||||||+|+++++.|+++.+..+|++..|+.+. .+++.+. ...++.++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 7999999999999999998543489999997633 3333221 146899999999974 35
Q ss_pred HHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcC-CcEEEeCCChhHHHHHHhhHHH-HHHcCCcEEe
Q 014177 102 LLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETK-TAYIDVCDDTIYSQRAKSFKDR-AIAANIPAIT 167 (429)
Q Consensus 102 l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~g-v~~vdis~~~~~~~~~~~~~~~-a~~~g~~~i~ 167 (429)
..++.+++|+|||||+.... .|+.++++.|.+.+ .+++.+|+............+. ..........
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 66677799999999975432 25788899998543 4666676521111111010000 0000111222
Q ss_pred c--CCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecC
Q 014177 168 T--GGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAG 206 (429)
Q Consensus 168 ~--~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G 206 (429)
. ....|..||+++|+++..+.++.+.++..+|... ..|
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~-i~g 200 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGI-IVG 200 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-E-EE-
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCc-ccc
Confidence 2 2234999999999999998877788999999965 455
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.8e-11 Score=112.96 Aligned_cols=137 Identities=20% Similarity=0.298 Sum_probs=100.1
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc--cEEEecCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV--DLVVHAAGP 118 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~--DvVi~~agp 118 (429)
+|+|+||+|++|+++++.|+++ |++|++.+|+ .+|+.|.+.+.+++++. |+||||+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSS------------------QLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCc------------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 5899999999999999999997 8899998874 46899999999988854 999999986
Q ss_pred CCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHH-HHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 119 FQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQR-AKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 119 ~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
... .++.+++++|.+.+.++|.+|+...|... ...++|.. + +.....|+.+|..++.
T Consensus 61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~-----~--~~~~~~Y~~~K~~~E~ 133 (287)
T TIGR01214 61 TDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDD-----A--TNPLNVYGQSKLAGEQ 133 (287)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCC-----C--CCCcchhhHHHHHHHH
Confidence 421 13567888998888888888765544221 11122211 1 1112459999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+++.+ +.++..+|. ...+|++.
T Consensus 134 ~~~~~----~~~~~ilR~-~~v~G~~~ 155 (287)
T TIGR01214 134 AIRAA----GPNALIVRT-SWLYGGGG 155 (287)
T ss_pred HHHHh----CCCeEEEEe-eecccCCC
Confidence 88754 457888998 45678764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.1e-10 Score=106.75 Aligned_cols=81 Identities=14% Similarity=0.273 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++.++.+|++|.+++.++++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 66789999999999999999999997 899999999988877766554 2457889999999998877655
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 86 ~~id~vi~~Ag~~ 98 (263)
T PRK07814 86 GRLDIVVNNVGGT 98 (263)
T ss_pred CCCCEEEECCCCC
Confidence 689999999853
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.4e-10 Score=108.27 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+|+++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. .++.++.+|++|.++++++++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8999999999888777666542 457889999999988877664
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 g~~d~vi~~ag~~ 93 (258)
T PRK07890 81 GRVDALVNNAFRV 93 (258)
T ss_pred CCccEEEECCccC
Confidence 589999999864
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.8e-10 Score=103.61 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++.+.+.+.+. .++.++.+|++|.+++.++++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56689999999999999999999997 7999999999877666655442 346788999999988877665
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~~id~vi~~ag~~ 94 (250)
T PRK07774 82 GGIDYLVNNAAIY 94 (250)
T ss_pred CCCCEEEECCCCc
Confidence 589999999864
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.8e-10 Score=115.43 Aligned_cols=105 Identities=23% Similarity=0.378 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------------CCcEEEEeeCCChHHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------------KNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------------~~v~~~~~Dl~d~~~l~~ 104 (429)
+++++|+|+||+|+||+++++.|+++ |++|++++|+.++++.+.+.+. .++.++++|+.|.+++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 35678999999999999999999997 8999999999988876654321 247889999999999999
Q ss_pred HhcCccEEEecCCCCCC-------------CchHHHHHHHHHcCCc-EEEeCC
Q 014177 105 ALRDVDLVVHAAGPFQQ-------------APKCTVLEAAIETKTA-YIDVCD 143 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~~-------------~~~~~v~~aa~~~gv~-~vdis~ 143 (429)
.++++|+||||+|.... .+..+++++|.+.|+. +|.+++
T Consensus 156 aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS 208 (576)
T PLN03209 156 ALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS 208 (576)
T ss_pred HhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 99999999999986421 2456788899888875 455554
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.7e-10 Score=110.98 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=102.2
Q ss_pred CCCCeEEEE----cCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH-------HHh-CCCcEEEEeeCCChHHHHH
Q 014177 37 NRNARVLVL----GGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV-------STL-GKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 37 ~~~~~VlV~----Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~-------~~l-~~~v~~~~~Dl~d~~~l~~ 104 (429)
.++++|||+ ||+||||+++++.|++. |++|++.+|+......+. .++ ...++++++|+.|.+.+.
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~- 126 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV- 126 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-
Confidence 456789999 99999999999999997 899999999876533221 111 124788999997733222
Q ss_pred HhcCccEEEecCCCCCCCchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 105 ALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
...++|+|||+++... .+..+++++|.+.|++ +|.+++...|..... .+........|..+|+.++.+
T Consensus 127 ~~~~~d~Vi~~~~~~~-~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~----------~p~~E~~~~~p~~sK~~~E~~ 195 (378)
T PLN00016 127 AGAGFDVVYDNNGKDL-DEVEPVADWAKSPGLKQFLFCSSAGVYKKSDE----------PPHVEGDAVKPKAGHLEVEAY 195 (378)
T ss_pred ccCCccEEEeCCCCCH-HHHHHHHHHHHHcCCCEEEEEccHhhcCCCCC----------CCCCCCCcCCCcchHHHHHHH
Confidence 1247999999987532 2457899999999995 555665443321100 010001112233378877776
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
++ +.+.+...+|. .+.+|++...
T Consensus 196 l~----~~~l~~~ilRp-~~vyG~~~~~ 218 (378)
T PLN00016 196 LQ----KLGVNWTSFRP-QYIYGPGNNK 218 (378)
T ss_pred HH----HcCCCeEEEec-eeEECCCCCC
Confidence 65 45678889998 4568886543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.2e-10 Score=119.84 Aligned_cols=96 Identities=23% Similarity=0.285 Sum_probs=76.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|+||+||+|+++++.|+++ |++|++.+|+.... ...++.++++|+.|.+++.++++++|+|||||+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPDS------WPSSADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchhh------cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 47999999999999999999997 89999999875321 12357889999999999999999999999999764
Q ss_pred CC------CchHHHHHHHHHcCCcE-EEeCC
Q 014177 120 QQ------APKCTVLEAAIETKTAY-IDVCD 143 (429)
Q Consensus 120 ~~------~~~~~v~~aa~~~gv~~-vdis~ 143 (429)
.. .++.+++++|.+.++.. |.+|+
T Consensus 73 ~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS 103 (854)
T PRK05865 73 GRNDHINIDGTANVLKAMAETGTGRIVFTSS 103 (854)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 31 24567888888888754 45544
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.6e-10 Score=107.75 Aligned_cols=81 Identities=23% Similarity=0.419 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.+++.++++ .+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 8999999999988888877766668899999999998877765 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||++|..
T Consensus 82 d~lv~~ag~~ 91 (261)
T PRK08265 82 DILVNLACTY 91 (261)
T ss_pred CEEEECCCCC
Confidence 9999999854
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.2e-09 Score=103.15 Aligned_cols=83 Identities=16% Similarity=0.293 Sum_probs=70.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
..+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++.++++|++|.+++.++++
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARR--GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3456689999999999999999999997 899999999998887776654 2356789999999998888776
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 114 ~~g~id~li~~AG~~ 128 (293)
T PRK05866 114 RIGGVDILINNAGRS 128 (293)
T ss_pred HcCCCCEEEECCCCC
Confidence 789999999864
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.8e-10 Score=106.46 Aligned_cols=81 Identities=17% Similarity=0.304 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|++++.+++.+.+. .++.++++|++|.++++++++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8899999999877766655442 357789999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 83 ~~~d~vi~~ag~~ 95 (262)
T PRK13394 83 GSVDILVSNAGIQ 95 (262)
T ss_pred CCCCEEEECCccC
Confidence 489999999864
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.8e-09 Score=101.26 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=67.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+.. ++.++++|++|.+++.++++ .+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999997 88999999999888777665542 57889999999998877765 37
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||++|..
T Consensus 80 d~lv~~ag~~ 89 (257)
T PRK07024 80 DVVIANAGIS 89 (257)
T ss_pred CEEEECCCcC
Confidence 9999999864
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.7e-10 Score=106.98 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=66.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.. .++.++++|++|.+++.++++ ++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIAEEGRID 76 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999987 8999999999888776543 357889999999998888775 789
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 77 ~li~~ag~~ 85 (273)
T PRK06182 77 VLVNNAGYG 85 (273)
T ss_pred EEEECCCcC
Confidence 999999864
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=106.23 Aligned_cols=82 Identities=17% Similarity=0.257 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+++++++|+||+|++|+++++.|+++ |++|++.+|+.++.+...+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 366789999999999999999999997 799999999988776665554 3457889999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 80 ~~id~vi~~ag~~ 92 (252)
T PRK06138 80 GRLDVLVNNAGFG 92 (252)
T ss_pred CCCCEEEECCCCC
Confidence 689999999864
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.8e-09 Score=101.77 Aligned_cols=82 Identities=20% Similarity=0.304 Sum_probs=69.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++++|+||+|++|+++++.|+++ |++|++.+|+.++.+.+...+. .++.++++|+.|.+++.++++
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 366789999999999999999999997 8899999999988777666553 457789999999999987765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~~d~vi~~ag~~ 92 (251)
T PRK07231 80 GSVDILVNNAGTT 92 (251)
T ss_pred CCCCEEEECCCCC
Confidence 579999999863
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.9e-10 Score=105.56 Aligned_cols=79 Identities=18% Similarity=0.273 Sum_probs=67.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-CccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-DVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~ 114 (429)
+++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+.. ..++.++++|++|.+++.+++. ++|+|||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence 578999999999999999999997 899999999887766654432 2357889999999999988877 8999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
|+|..
T Consensus 80 ~ag~~ 84 (257)
T PRK09291 80 NAGIG 84 (257)
T ss_pred CCCcC
Confidence 99854
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3e-09 Score=100.50 Aligned_cols=78 Identities=23% Similarity=0.357 Sum_probs=68.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~DvV 112 (429)
|+++|+||+|++|+++++.|+++ |++|++.+|++++++.+...++.++.++.+|++|.+++.++++ ++|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57999999999999999999987 8999999999988887776665568889999999988877664 69999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||++|..
T Consensus 79 i~~ag~~ 85 (248)
T PRK10538 79 VNNAGLA 85 (248)
T ss_pred EECCCcc
Confidence 9999853
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.8e-10 Score=106.09 Aligned_cols=80 Identities=20% Similarity=0.257 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+ ++++++.+++ +.++..+++|++|.+++.++++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 66789999999999999999999997 8999999999 6666655544 2357889999999988877665
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 81 g~id~li~~Ag~~ 93 (272)
T PRK08589 81 GRVDVLFNNAGVD 93 (272)
T ss_pred CCcCEEEECCCCC
Confidence 579999999864
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.7e-10 Score=105.18 Aligned_cols=82 Identities=17% Similarity=0.278 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++..+++|++|.+++.++++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999997 8999999999988887766553 357788999999998877764
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|++|||+|...
T Consensus 85 g~id~lv~~ag~~~ 98 (253)
T PRK05867 85 GGIDIAVCNAGIIT 98 (253)
T ss_pred CCCCEEEECCCCCC
Confidence 7899999998653
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.2e-10 Score=105.47 Aligned_cols=82 Identities=12% Similarity=0.184 Sum_probs=69.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++|+||+|.||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 367789999999999999999999997 899999999988877766554 2357889999999998888775
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 83 ~g~iD~lv~nag~~ 96 (263)
T PRK08339 83 IGEPDIFFFSTGGP 96 (263)
T ss_pred hCCCcEEEECCCCC
Confidence 589999999854
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.3e-10 Score=107.02 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++||||+|+||+++++.|+++ |++|++++|+.++++++.+++. .++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 67789999999999999999999997 8999999999888777665543 346788999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 g~id~li~nAg~~ 94 (275)
T PRK05876 82 GHVDVVFSNAGIV 94 (275)
T ss_pred CCCCEEEECCCcC
Confidence 479999999853
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.9e-10 Score=103.38 Aligned_cols=82 Identities=18% Similarity=0.256 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|++++++.+.+.+. .++.++++|+.|.+++.++++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAE--GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999986 8899999999988777766553 357889999999998877765
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+|||++|+..
T Consensus 82 ~~d~vi~~ag~~~ 94 (237)
T PRK07326 82 GLDVLIANAGVGH 94 (237)
T ss_pred CCCEEEECCCCCC
Confidence 6899999998653
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.3e-09 Score=98.32 Aligned_cols=78 Identities=21% Similarity=0.359 Sum_probs=66.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi~ 114 (429)
++|+++|+||+|++|+++++.|+++ ++|++.+|+.++.+.+.+.. ..++++++|++|.+++.++++ ++|+|||
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT---HTLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 4679999999999999999999985 68999999988776665444 357889999999999988887 5999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++|..
T Consensus 78 ~ag~~ 82 (227)
T PRK08219 78 NAGVA 82 (227)
T ss_pred CCCcC
Confidence 99864
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-09 Score=104.25 Aligned_cols=79 Identities=15% Similarity=0.221 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.. .+.+.+++ +.++.++++|++|.+++.++++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 67789999999999999999999997 899999999853 33343333 2356788999999887776665
Q ss_pred -CccEEEecCCC
Q 014177 108 -DVDLVVHAAGP 118 (429)
Q Consensus 108 -~~DvVi~~agp 118 (429)
++|++||+||.
T Consensus 83 ~~id~lv~nAg~ 94 (260)
T PRK12823 83 GRIDVLINNVGG 94 (260)
T ss_pred CCCeEEEECCcc
Confidence 68999999974
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2e-09 Score=95.77 Aligned_cols=82 Identities=17% Similarity=0.266 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++.+.+|||+||+..||..+++.+.+. |-+|++++|+.+++++.....+ .+....+|+.|.++++++++ .
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~e~~L~e~~~~~p-~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLEL--GNTVIICGRNEERLAEAKAENP-EIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCcHHHHHHHHhcCc-chheeeecccchhhHHHHHHHHHhhCCc
Confidence 356779999999999999999999997 7799999999999999887764 57889999999998877765 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
.+++|||||.-.
T Consensus 79 lNvliNNAGIqr 90 (245)
T COG3967 79 LNVLINNAGIQR 90 (245)
T ss_pred hheeeecccccc
Confidence 799999999643
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.5e-09 Score=104.84 Aligned_cols=81 Identities=17% Similarity=0.295 Sum_probs=69.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++|+|+||+|+||+++++.|+++ |++|++++|+.++++.+.+++. .+.++++|++|.++++++++ +
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~~~~~~~~~ 99 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAFAERFLDSGRR 99 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 466789999999999999999999997 8899999999988877766553 47889999999998877764 6
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 100 iD~li~nAg~~ 110 (315)
T PRK06196 100 IDILINNAGVM 110 (315)
T ss_pred CCEEEECCCCC
Confidence 89999999853
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=9.7e-10 Score=103.35 Aligned_cols=81 Identities=17% Similarity=0.331 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++++++|+||+|++|+++++.|+++ +++|++++|+. ++.+.+...+ +..+.++.+|++|.+++.++++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999997 89999999863 4444443332 1347789999999998887766
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~~~~~d~vi~~ag~~ 96 (249)
T PRK09135 82 AFGRLDALVNNASSF 96 (249)
T ss_pred HcCCCCEEEECCCCC
Confidence 479999999853
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.8e-10 Score=105.95 Aligned_cols=81 Identities=23% Similarity=0.345 Sum_probs=69.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++||||+|.||+++++.|+++ |++|++.+|+.++++++.+.+. ++.++.+|++|.+++.++++ +
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAAL--GARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 366789999999999999999999997 8999999999998887776654 57889999999998766554 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|++||++|..
T Consensus 79 id~li~~ag~~ 89 (273)
T PRK07825 79 IDVLVNNAGVM 89 (273)
T ss_pred CCEEEECCCcC
Confidence 79999999864
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.1e-09 Score=104.02 Aligned_cols=81 Identities=15% Similarity=0.213 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.+++.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 66789999999999999999999997 8999999999888877766543 357789999999988887765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~~g~id~li~~ag~~ 97 (260)
T PRK07063 83 AFGPLDVLVNNAGIN 97 (260)
T ss_pred HhCCCcEEEECCCcC
Confidence 689999999864
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.2e-09 Score=97.99 Aligned_cols=82 Identities=16% Similarity=0.271 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++++++|+||+|++|+++++.|+++ |++|++. .|+.+++++....+. .++.++++|++|.+++.++++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 356789999999999999999999997 7888774 687776666554442 357789999999998877765
Q ss_pred ---------CccEEEecCCCC
Q 014177 108 ---------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---------~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~ 101 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIG 101 (254)
T ss_pred HhccccCCCCccEEEECCCCC
Confidence 489999999864
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-10 Score=110.04 Aligned_cols=80 Identities=23% Similarity=0.323 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. .++.++++|++|.++++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 56789999999999999999999997 7999999999988877766652 357889999999998887775
Q ss_pred -CccEEEecCCC
Q 014177 108 -DVDLVVHAAGP 118 (429)
Q Consensus 108 -~~DvVi~~agp 118 (429)
++|+|||+||.
T Consensus 82 ~~iD~li~nAg~ 93 (322)
T PRK07453 82 KPLDALVCNAAV 93 (322)
T ss_pred CCccEEEECCcc
Confidence 48999999984
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.6e-09 Score=100.68 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=98.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.+ +.+.+...+ +.++.++++|++|.+++.++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999987 889999998753 444444333 2357789999999998877665
Q ss_pred --CccEEEecCCCCCC-------------CchHHHHHHHHHc---CCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC
Q 014177 108 --DVDLVVHAAGPFQQ-------------APKCTVLEAAIET---KTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 108 --~~DvVi~~agp~~~-------------~~~~~v~~aa~~~---gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~ 169 (429)
++|+|||+++.... .+...+++++.+. +.+.|.+++...... .. ....+ .
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~---~~-----~~~~~---~- 149 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFI---PT-----VKTMP---E- 149 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcC---cc-----ccCCc---c-
Confidence 58999999975321 1345677777653 234565654321100 00 00001 0
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
-..|+.||..++.+++.+..++... .+++
T Consensus 150 ~~~Y~~sK~a~e~~~~~l~~~~~~~--~i~v 178 (248)
T PRK07806 150 YEPVARSKRAGEDALRALRPELAEK--GIGF 178 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcc--CeEE
Confidence 1248899999999998887554332 3554
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.1e-09 Score=101.92 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=66.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++.+|+++|+||++.||+++++.|+++ |++|++.+|+.. +..+..+..+.++.++++|++|.++++++++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 366799999999999999999999997 899999888643 2222333334567889999999998888765
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 83 ~iD~lv~~ag~~~ 95 (251)
T PRK12481 83 HIDILINNAGIIR 95 (251)
T ss_pred CCCEEEECCCcCC
Confidence 5899999998643
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.1e-10 Score=105.39 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=68.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--------Cc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--------DV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--------~~ 109 (429)
||+++|+||+|++|+++++.|+++ |++|++.+|+.++++++...+. .++.++++|++|.+++.++++ ++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999997 8999999999998888776654 468899999999988877655 46
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||||..
T Consensus 79 d~vi~~ag~~ 88 (260)
T PRK08267 79 DVLFNNAGIL 88 (260)
T ss_pred CEEEECCCCC
Confidence 9999999864
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.4e-10 Score=108.11 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++++|+||+|.||+++++.|.+. |++|++.+|+.++++.+.++++. .+..+++|++|.+++.++++
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999997 89999999999988888777652 35556799999988877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 84 g~id~vI~nAG~~ 96 (296)
T PRK05872 84 GGIDVVVANAGIA 96 (296)
T ss_pred CCCCEEEECCCcC
Confidence 689999999864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-09 Score=102.87 Aligned_cols=81 Identities=15% Similarity=0.283 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|.||.++++.|++. |++|++.+|+.++++.+.+++. .++.++.+|++|.++++++++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999997 8899999999988877766542 357789999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 82 ~~id~li~~ag~~ 94 (254)
T PRK07478 82 GGLDIAFNNAGTL 94 (254)
T ss_pred CCCCEEEECCCCC
Confidence 689999999864
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=106.96 Aligned_cols=81 Identities=25% Similarity=0.370 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++++|+|+||+|+||+++++.|+++ |++|++++|+.++.+...+.+. .++.++++|++|.++++++++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 467799999999999999999999997 7899999999887665443331 357789999999998877664
Q ss_pred ----CccEEEecCCC
Q 014177 108 ----DVDLVVHAAGP 118 (429)
Q Consensus 108 ----~~DvVi~~agp 118 (429)
++|+||||||.
T Consensus 91 ~~~~~iD~li~nAg~ 105 (306)
T PRK06197 91 AAYPRIDLLINNAGV 105 (306)
T ss_pred hhCCCCCEEEECCcc
Confidence 58999999985
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.2e-09 Score=108.42 Aligned_cols=164 Identities=16% Similarity=0.103 Sum_probs=105.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH---HHHHHH---h-------C-CCcEEEEeeCCCh------H
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG---AAMVST---L-------G-KNSEFAEVNIYNE------G 100 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~---~~l~~~---l-------~-~~v~~~~~Dl~d~------~ 100 (429)
+|+||||+||+|+++++.|++++...+|++..|+.+.. +++.+. . . .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999973336899999976532 122211 1 0 3688899998753 4
Q ss_pred HHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHH-hhHHHHHHcCCcEE
Q 014177 101 SLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAK-SFKDRAIAANIPAI 166 (429)
Q Consensus 101 ~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~-~~~~~a~~~g~~~i 166 (429)
...++.+++|+|||||+.... .++.+++++|.+.+++ .+.+++...+..... ...+. ..-....
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~--~~~~~~~ 158 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTED--DAIVTPP 158 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccc--ccccccc
Confidence 566677899999999985321 2456788999988877 556655443321100 00000 0000001
Q ss_pred ecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCC
Q 014177 167 TTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 167 ~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~ 208 (429)
......|+.||+.++.+++.+.+. +.++..+|.. ..+|+.
T Consensus 159 ~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg-~v~G~~ 198 (367)
T TIGR01746 159 PGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPG-RILGNS 198 (367)
T ss_pred cccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCC-ceeecC
Confidence 111235999999999999877643 6777888874 456653
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.4e-09 Score=101.18 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=65.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--------Cc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------DV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------~~ 109 (429)
++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+ ..++++.+|++|.++++++++ ++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 3578999999999999999999987 8999999999988877654 357889999999988776654 47
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||+||..
T Consensus 78 d~li~~Ag~~ 87 (277)
T PRK05993 78 DALFNNGAYG 87 (277)
T ss_pred cEEEECCCcC
Confidence 9999999753
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.7e-10 Score=109.92 Aligned_cols=129 Identities=21% Similarity=0.296 Sum_probs=86.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+.|+||||||+||+|+++++.|.++ |++|++..+ |+.|.+.+...++ ++|+||||
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~---------------------~~~~~~~v~~~l~~~~~D~ViH~ 64 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSG---------------------RLENRASLEADIDAVKPTHVFNA 64 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCEEEEecC---------------------ccCCHHHHHHHHHhcCCCEEEEC
Confidence 3478999999999999999999997 778765322 2334444444444 79999999
Q ss_pred CCCCCC------------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-H------hhHHHHHHcCCcEEecCC
Q 014177 116 AGPFQQ------------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-K------SFKDRAIAANIPAITTGG 170 (429)
Q Consensus 116 agp~~~------------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~------~~~~~a~~~g~~~i~~~g 170 (429)
|+.... .++.+++++|.+.|++.+.++++..|.... . .+.|. ..+. ...
T Consensus 65 Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee----~~p~--~~~ 138 (298)
T PLN02778 65 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEE----DTPN--FTG 138 (298)
T ss_pred CcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcC----CCCC--CCC
Confidence 986421 246789999999999988776554432110 0 11111 1111 122
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
..||.||++++.++..|. +...+|+
T Consensus 139 s~Yg~sK~~~E~~~~~y~-----~~~~lr~ 163 (298)
T PLN02778 139 SFYSKTKAMVEELLKNYE-----NVCTLRV 163 (298)
T ss_pred CchHHHHHHHHHHHHHhh-----ccEEeee
Confidence 569999999999998764 3445665
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-09 Score=102.54 Aligned_cols=81 Identities=21% Similarity=0.292 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++++|+||+|+||+++++.|+++ |++|++.+|+.. ++.+.....+.++.++++|++|.+++.++++ +
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 67899999999999999999999997 889999998752 2222223334567899999999998876654 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|++||++|..
T Consensus 81 ~d~li~~ag~~ 91 (248)
T TIGR01832 81 IDILVNNAGII 91 (248)
T ss_pred CCEEEECCCCC
Confidence 89999999864
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.4e-09 Score=101.25 Aligned_cols=81 Identities=26% Similarity=0.358 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
|++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+..++ +.++.++.+|++|.+++.++++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999997 899999999988877766554 3467889999999998887766
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+++..
T Consensus 80 ~~~d~vi~~a~~~ 92 (258)
T PRK12429 80 GGVDILVNNAGIQ 92 (258)
T ss_pred CCCCEEEECCCCC
Confidence 589999999854
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=107.69 Aligned_cols=82 Identities=20% Similarity=0.225 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+.+++|+|+||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999997 899999999998887766554 3467889999999998887754
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 83 ~g~iD~lInnAg~~ 96 (334)
T PRK07109 83 LGPIDTWVNNAMVT 96 (334)
T ss_pred CCCCCEEEECCCcC
Confidence 689999999854
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-09 Score=106.97 Aligned_cols=81 Identities=19% Similarity=0.277 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|.||+++++.|+++ |++|++++|+.++++++.+++ +.++.++.+|++|.++++++++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARR--GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999997 899999999999888776654 2457788999999998888763
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 83 g~iD~lVnnAG~~ 95 (330)
T PRK06139 83 GRIDVWVNNVGVG 95 (330)
T ss_pred CCCCEEEECCCcC
Confidence 689999999853
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=102.35 Aligned_cols=80 Identities=23% Similarity=0.352 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+. ..+.++++|++|.+++.++++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAE 79 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999997 8999999999888777665542 235677999999998888776
Q ss_pred ---CccEEEecCCC
Q 014177 108 ---DVDLVVHAAGP 118 (429)
Q Consensus 108 ---~~DvVi~~agp 118 (429)
++|+|||||++
T Consensus 80 ~~~~id~vi~~A~~ 93 (256)
T PRK09186 80 KYGKIDGAVNCAYP 93 (256)
T ss_pred HcCCccEEEECCcc
Confidence 37999999964
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-09 Score=105.00 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=64.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~Dv 111 (429)
||+++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.. .++.++.+|++|.+++.++++ ++|+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 478999999999999999999987 8999999999887766543 346788999999988877664 6899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
|||++|..
T Consensus 76 vi~~ag~~ 83 (274)
T PRK05693 76 LINNAGYG 83 (274)
T ss_pred EEECCCCC
Confidence 99999853
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.5e-09 Score=101.42 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=81.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC-hHHHHHHh-cCccEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN-EGSLLMAL-RDVDLV 112 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d-~~~l~~~~-~~~DvV 112 (429)
+..++|+|+|+||+|++|+.+++.|+++ +++|++..|+.++....... ..+++++++|++| .+.+.+.+ .++|+|
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v 89 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEGSDKLVEAIGDDSDAV 89 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhccc-CCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence 3456789999999999999999999997 78999999998776544322 2358899999998 46777777 689999
Q ss_pred EecCCCCCC-----------CchHHHHHHHHHcCCcE-EEeCCC
Q 014177 113 VHAAGPFQQ-----------APKCTVLEAAIETKTAY-IDVCDD 144 (429)
Q Consensus 113 i~~agp~~~-----------~~~~~v~~aa~~~gv~~-vdis~~ 144 (429)
|+++|.... .+..++++++.+.++.. |.+++.
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 999875321 13467888888877654 444443
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-08 Score=97.68 Aligned_cols=81 Identities=23% Similarity=0.327 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++++++|+||+|+||+++++.|+++ |++|++.+|+.++.+...+.+. .++.++++|+.|.+++.++++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 66799999999999999999999997 8899999999887766655442 357788999999998877765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 83 ~~~~~d~li~~ag~~ 97 (276)
T PRK05875 83 WHGRLHGVVHCAGGS 97 (276)
T ss_pred HcCCCCEEEECCCcc
Confidence 689999999853
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.7e-09 Score=98.63 Aligned_cols=80 Identities=23% Similarity=0.333 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++++|+.++++.+.+.+. .++.++++|++|.++++++++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999997 7899999999887776655442 357789999999998866554
Q ss_pred -CccEEEecCCC
Q 014177 108 -DVDLVVHAAGP 118 (429)
Q Consensus 108 -~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 58999999975
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.8e-09 Score=102.34 Aligned_cols=79 Identities=22% Similarity=0.309 Sum_probs=67.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+|+++|+||+|+||+++++.|+++ |++|++.+|+.++++.+..++. .++.++++|++|.+++.++++ +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999997 8899999999887777665543 356789999999998877665 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||+|..
T Consensus 80 id~vi~~ag~~ 90 (256)
T PRK08643 80 LNVVVNNAGVA 90 (256)
T ss_pred CCEEEECCCCC
Confidence 89999999864
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=103.29 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+|+++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+.+. .++..+++|++|.++++++++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 56799999999999999999999997 8999999999887776665543 247788999999998888775
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
.+|+|||++|..
T Consensus 86 ~~~d~li~~ag~~ 98 (255)
T PRK07523 86 GPIDILVNNAGMQ 98 (255)
T ss_pred CCCCEEEECCCCC
Confidence 489999999864
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.6e-09 Score=103.63 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=70.0
Q ss_pred ccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHH
Q 014177 28 LDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 28 ~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~ 103 (429)
+|....+..+++|+++|+||+|+||+++++.|+++ |++|++++|+.+ ..+.+.+.+ +.++.++.+|++|.+++.
T Consensus 35 ~~~~~~~~~~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~ 112 (290)
T PRK06701 35 APNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCK 112 (290)
T ss_pred ccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHH
Confidence 34444456788899999999999999999999997 899999998753 333333333 235778999999999887
Q ss_pred HHhc-------CccEEEecCCCC
Q 014177 104 MALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 104 ~~~~-------~~DvVi~~agp~ 119 (429)
++++ ++|+|||+||..
T Consensus 113 ~~~~~i~~~~~~iD~lI~~Ag~~ 135 (290)
T PRK06701 113 DAVEETVRELGRLDILVNNAAFQ 135 (290)
T ss_pred HHHHHHHHHcCCCCEEEECCccc
Confidence 7765 579999999854
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.6e-09 Score=101.59 Aligned_cols=78 Identities=23% Similarity=0.291 Sum_probs=66.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+++|+||+|.||+++++.|+++ |++|++.+|+.+++++..+++. .++.++++|++|.++++++++ ++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999997 8999999999888777666553 357789999999998887764 689
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 79 ~li~naG~~ 87 (259)
T PRK08340 79 ALVWNAGNV 87 (259)
T ss_pred EEEECCCCC
Confidence 999999853
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.6e-09 Score=99.46 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=66.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC----ccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD----VDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~----~DvVi~ 114 (429)
|++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.. .++.++++|++|.+++++++++ .|.+||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQSVLDELHTQS-ANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc-CCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 478999999999999999999997 899999999988887776543 3678899999999999988874 588999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
++|.
T Consensus 78 ~ag~ 81 (240)
T PRK06101 78 NAGD 81 (240)
T ss_pred cCcc
Confidence 9874
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-08 Score=96.05 Aligned_cols=82 Identities=22% Similarity=0.304 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++|+|+||+|++|+++++.|+++ |++|++.+|+.+++......+. .++.++.+|+.|.+++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999997 7899999999876665544432 347889999999998888775
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|+|||++|...
T Consensus 82 ~~~d~vi~~ag~~~ 95 (251)
T PRK12826 82 GRLDILVANAGIFP 95 (251)
T ss_pred CCCCEEEECCCCCC
Confidence 6899999997654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=3e-09 Score=100.78 Aligned_cols=81 Identities=20% Similarity=0.328 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+...+ ..++.++.+|+++.+++.++++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 66799999999999999999999987 889999999998887776554 2457889999999988888765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 85 ~~~d~li~~ag~~ 97 (258)
T PRK06949 85 GTIDILVNNSGVS 97 (258)
T ss_pred CCCCEEEECCCCC
Confidence 589999999854
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.9e-09 Score=102.31 Aligned_cols=81 Identities=23% Similarity=0.405 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+++. .++..+++|++|.+++.++++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999987 8899999999887777665542 357789999999988877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 86 g~id~li~~ag~~ 98 (278)
T PRK08277 86 GPCDILINGAGGN 98 (278)
T ss_pred CCCCEEEECCCCC
Confidence 689999999854
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.4e-09 Score=100.70 Aligned_cols=80 Identities=23% Similarity=0.359 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|++. |++|++.+|+ ++.+++.+. .+.++.++++|++|.+++.++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56799999999999999999999997 8999999988 444444333 23467899999999998887776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 90 g~id~li~~ag~~ 102 (258)
T PRK06935 90 GKIDILVNNAGTI 102 (258)
T ss_pred CCCCEEEECCCCC
Confidence 679999999864
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.3e-09 Score=101.78 Aligned_cols=79 Identities=27% Similarity=0.296 Sum_probs=65.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+|+||+|+||+++++.|+++ |++|++++|+..+++.+.+.+. .++.++.+|++|.+++.++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999997 8999999999887766654431 357889999999888776654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~id~vv~~ag~~ 92 (259)
T PRK12384 80 GRVDLLVYNAGIA 92 (259)
T ss_pred CCCCEEEECCCcC
Confidence 579999999754
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.9e-09 Score=102.27 Aligned_cols=81 Identities=15% Similarity=0.241 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------HHHHHHHh---CCCcEEEEeeCCChHHHHHHh
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------GAAMVSTL---GKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.+. ++...+++ +.++.++++|++|.+++.+++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 56789999999999999999999997 7899999997643 23333222 245778999999999888776
Q ss_pred c-------CccEEEecCCCC
Q 014177 107 R-------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-------~~DvVi~~agp~ 119 (429)
+ ++|+|||++|..
T Consensus 82 ~~~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHHHhCCCCEEEECCCCc
Confidence 5 689999999853
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=102.35 Aligned_cols=77 Identities=25% Similarity=0.361 Sum_probs=64.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++|+||+|+||+++++.|+++ |++|++.+|+.++ ...+.++.++++|++|.+++.++++ +
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 366799999999999999999999997 8899999998764 1122457889999999988887765 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||+|..
T Consensus 76 id~vi~~ag~~ 86 (252)
T PRK07856 76 LDVLVNNAGGS 86 (252)
T ss_pred CCEEEECCCCC
Confidence 69999999854
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.5e-09 Score=102.00 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++.+++++|+||+|++|+++++.|+++ |++|++.+|+.+++++..+.+ +.++.++++|++|.+++.++++
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 356789999999999999999999997 889999999988877665554 2357889999999998888775
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|+||||+|...
T Consensus 85 ~~~id~li~~ag~~~ 99 (265)
T PRK07097 85 VGVIDILVNNAGIIK 99 (265)
T ss_pred CCCCCEEEECCCCCC
Confidence 4899999998643
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3e-09 Score=101.36 Aligned_cols=82 Identities=21% Similarity=0.264 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+++++.++|+||+|+||+++++.|+++ |++|++.+|+.++++...+++. .++..+++|++|.+++.++++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE 82 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 366789999999999999999999997 8999999999888776655432 246788999999998877654
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 83 ~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 83 ARFGGVDMLVNNAGQG 98 (265)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999864
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=6e-09 Score=96.92 Aligned_cols=77 Identities=19% Similarity=0.275 Sum_probs=64.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----CccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~DvVi 113 (429)
|++++|+||+|++|+++++.|+++ |++|++++|+.++.+.+.+ + .++.+..+|++|.++++++++ ++|+||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQDTALQA-L-PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcchHHHHh-c-cccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 478999999999999999999997 8999999999887665533 2 357788999999988877766 589999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
|++|..
T Consensus 77 ~~ag~~ 82 (225)
T PRK08177 77 VNAGIS 82 (225)
T ss_pred EcCccc
Confidence 999864
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.2e-09 Score=100.01 Aligned_cols=81 Identities=26% Similarity=0.384 Sum_probs=68.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ +++|++.+|+.++.+++.+.+ +.++.++++|++|.++++++++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999997 889999999988777665443 2468889999999998888765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 79 ~~~d~vi~~ag~~ 91 (250)
T TIGR03206 79 GPVDVLVNNAGWD 91 (250)
T ss_pred CCCCEEEECCCCC
Confidence 589999999753
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2e-09 Score=101.48 Aligned_cols=81 Identities=19% Similarity=0.261 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
|.+++++|+||+|++|+++++.|+++ |++|++ .+|+.++.+++.+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999997 788766 578877766655543 2457889999999998887765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~~id~vi~~ag~~ 93 (250)
T PRK08063 80 FGRLDVFVNNAASG 93 (250)
T ss_pred cCCCCEEEECCCCC
Confidence 589999999853
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.6e-09 Score=103.47 Aligned_cols=81 Identities=23% Similarity=0.288 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|+||+++++.|+++ |++|++++|+.+.++...+.+. .++.++.+|++|.+++.++++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999987 8999999999887766544432 356788999999988877765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 85 ~~iD~vi~~ag~~ 97 (264)
T PRK07576 85 GPIDVLVSGAAGN 97 (264)
T ss_pred CCCCEEEECCCCC
Confidence 479999999743
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.2e-09 Score=104.52 Aligned_cols=75 Identities=25% Similarity=0.406 Sum_probs=63.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
.+++++|+||+|++|+++++.|+++ |++|++.+|+.++.+.. .+++++++|++|.++++++++ ++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARAAPI-----PGVELLELDVTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhcccc-----CCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence 3578999999999999999999997 89999999987654321 357899999999999888876 479
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+||||+|..
T Consensus 76 ~li~~ag~~ 84 (270)
T PRK06179 76 VLVNNAGVG 84 (270)
T ss_pred EEEECCCCC
Confidence 999999864
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.2e-09 Score=100.69 Aligned_cols=81 Identities=20% Similarity=0.324 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.+++.++++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 55689999999999999999999987 789999999988766655443 2357789999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 83 ~~id~vi~~ag~~ 95 (239)
T PRK07666 83 GSIDILINNAGIS 95 (239)
T ss_pred CCccEEEEcCccc
Confidence 689999999864
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.3e-09 Score=101.84 Aligned_cols=81 Identities=21% Similarity=0.394 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
..+++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+...+ +.++.++++|++|.+++.++++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 55679999999999999999999997 889999999887766655443 2357788999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 86 ~~id~vi~~Ag~~ 98 (274)
T PRK07775 86 GEIEVLVSGAGDT 98 (274)
T ss_pred CCCCEEEECCCcC
Confidence 579999999854
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-09 Score=102.48 Aligned_cols=81 Identities=21% Similarity=0.258 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++++|+||+|++|+++++.|+++ |++|++++|+.+..+.+.+.... ++.++.+|++|.+++.++++ +
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999997 88999999998877776655432 45789999999998877664 6
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 87 ~d~vi~~ag~~ 97 (264)
T PRK12829 87 LDVLVNNAGIA 97 (264)
T ss_pred CCEEEECCCCC
Confidence 89999999865
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.3e-09 Score=98.78 Aligned_cols=81 Identities=22% Similarity=0.281 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++++++|+||+|++|+++++.|+++ ++.|++.+|+.++++.+...++.++.++.+|++|.++++++++ ++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56789999999999999999999997 7888888999888887766665568889999999998877653 68
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||+|..
T Consensus 82 d~vi~~ag~~ 91 (245)
T PRK12936 82 DILVNNAGIT 91 (245)
T ss_pred CEEEECCCCC
Confidence 9999999853
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=3e-09 Score=101.23 Aligned_cols=73 Identities=15% Similarity=0.307 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++|+||+|+||+++++.|++. |++|++.+|+.... .++.++++|++|.++++++++ +
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPSY--------NDVDYFKVDVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCcccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467799999999999999999999997 89999999986542 247889999999988877765 6
Q ss_pred ccEEEecCCC
Q 014177 109 VDLVVHAAGP 118 (429)
Q Consensus 109 ~DvVi~~agp 118 (429)
+|+|||+||.
T Consensus 73 id~li~~Ag~ 82 (258)
T PRK06398 73 IDILVNNAGI 82 (258)
T ss_pred CCEEEECCCC
Confidence 8999999985
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.1e-09 Score=100.74 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=67.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
+++++|+||+|+||+.+++.|+++ |++|++.+|+.++++.+.+.+. .++.++++|+.|.+++.++++ ++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999999987 7899999999988877766553 357889999999998877665 489
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 80 ~vi~~ag~~ 88 (257)
T PRK07074 80 VLVANAGAA 88 (257)
T ss_pred EEEECCCCC
Confidence 999999854
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-08 Score=96.15 Aligned_cols=79 Identities=20% Similarity=0.398 Sum_probs=62.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++.++|+||+|++|+++++.|+++ |+.|++.+ |++++.+.+.+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAER--GYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999997 77887776 4445555444333 2356789999999998888775
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~id~li~~ag~~ 91 (248)
T PRK06123 80 RLDALVNNAGIL 91 (248)
T ss_pred CCCEEEECCCCC
Confidence 589999999864
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.6e-09 Score=97.22 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=93.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----CccEEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----DVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----~~DvVi~~ 115 (429)
|+++|+||+|.+|+++++.|.++ |++|++.+|+.++++.+.+.+ ++.++++|++|.++++++++ ++|++||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 37999999999999999999987 899999999998887776654 36788999999998888765 58999999
Q ss_pred CCCCCCCc---hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC-----CCccchhHHHHHHHHHHH
Q 014177 116 AGPFQQAP---KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG-----GIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~~~~~---~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~-----g~~pG~s~~~a~~~~~~~ 187 (429)
+|+....+ ...+.+. .+.--+.++++-...+. ..+.+....++.|..+.+++ ...|+.||.....+++.+
T Consensus 77 ag~~~~~~~~~~~~~~~~-~~~~~~~~~~N~~~~~~-~~~~~~~~~~~~g~Iv~isS~~~~~~~~Y~asKaal~~~~~~l 154 (223)
T PRK05884 77 PAPSWDAGDPRTYSLADT-ANAWRNALDATVLSAVL-TVQSVGDHLRSGGSIISVVPENPPAGSAEAAIKAALSNWTAGQ 154 (223)
T ss_pred CCccccCCCCcccchhcC-HHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCeEEEEecCCCCCccccHHHHHHHHHHHHHH
Confidence 98532100 0011110 01111112222111111 11122222233454444432 234899999999999888
Q ss_pred HhhcC
Q 014177 188 RNESK 192 (429)
Q Consensus 188 ~~~~~ 192 (429)
..++.
T Consensus 155 a~e~~ 159 (223)
T PRK05884 155 AAVFG 159 (223)
T ss_pred HHHhh
Confidence 76654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.6e-09 Score=100.20 Aligned_cols=81 Identities=19% Similarity=0.298 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.++++||+||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++..+.+|++|.+++.++++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999997 8999999999888777666553 346778899999998887764
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 85 ~~id~vi~~ag~~ 97 (254)
T PRK08085 85 GPIDVLINNAGIQ 97 (254)
T ss_pred CCCCEEEECCCcC
Confidence 489999999853
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.8e-08 Score=92.97 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++|+||+|+||+++++.|+++ |++|++++|+.++++.+.+++. .++.++++|+.|.++++++++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999997 7899999999888777666542 346788999999988876655
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 83 ~~~id~li~~ag~ 95 (252)
T PRK07035 83 HGRLDILVNNAAA 95 (252)
T ss_pred cCCCCEEEECCCc
Confidence 58999999974
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.5e-09 Score=100.58 Aligned_cols=80 Identities=20% Similarity=0.384 Sum_probs=63.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++|+++|+||+|+||+++++.|+++ ++++++.++ +.++++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999999999987 788888765 445555554433 3457889999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 86 ~~iD~vi~~ag~~ 98 (258)
T PRK09134 86 GPITLLVNNASLF 98 (258)
T ss_pred CCCCEEEECCcCC
Confidence 479999999864
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.4e-09 Score=99.50 Aligned_cols=79 Identities=24% Similarity=0.316 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi 113 (429)
+.+++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.. ...++++|++|.+++.++++ ++|+||
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAAALDRLAGET--GCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh--CCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 56789999999999999999999997 789999999988887776654 35788999999988888776 589999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
|++|..
T Consensus 83 ~~ag~~ 88 (245)
T PRK07060 83 NCAGIA 88 (245)
T ss_pred ECCCCC
Confidence 999864
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.7e-09 Score=101.48 Aligned_cols=167 Identities=20% Similarity=0.205 Sum_probs=107.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch------hHHHHHH-------HhCCCcEEEEeeCC------ChH
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE------KGAAMVS-------TLGKNSEFAEVNIY------NEG 100 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~------~~~~l~~-------~l~~~v~~~~~Dl~------d~~ 100 (429)
++|++||||||+|++++.+|+.+- ..+|++..|..+ ++++... ...++++.+.+|+. +..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~-~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS-DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 479999999999999999999863 578999888543 2333222 22257889999998 334
Q ss_pred HHHHHhcCccEEEecCCCCC------C------CchHHHHHHHHHcCCc-EEEeCCChhHHH----H-HHhhHHHHHHcC
Q 014177 101 SLLMALRDVDLVVHAAGPFQ------Q------APKCTVLEAAIETKTA-YIDVCDDTIYSQ----R-AKSFKDRAIAAN 162 (429)
Q Consensus 101 ~l~~~~~~~DvVi~~agp~~------~------~~~~~v~~aa~~~gv~-~vdis~~~~~~~----~-~~~~~~~a~~~g 162 (429)
...++.+.+|.|||+++-.+ . .|+..+++.|...+.+ +..+|+-..... . ....++......
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence 56677778999999986332 1 3678899988877665 444443221110 0 001110000000
Q ss_pred CcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 163 IPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 163 ~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
... +.-..|+-||+.++++++...+. +.++..+|+.+. .|....|
T Consensus 160 ~~~--~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I-~gds~tG 204 (382)
T COG3320 160 VGQ--GLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYI-TGDSRTG 204 (382)
T ss_pred ccC--ccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCee-eccCccC
Confidence 111 11134999999999999998855 889999998654 4444333
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=5e-09 Score=99.46 Aligned_cols=82 Identities=17% Similarity=0.272 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
.+++++++|+||+|+||+++++.|+++ |+++++.+++. +.++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence 356789999999999999999999987 78866665432 3344443333 2367889999999998887765
Q ss_pred ------CccEEEecCCCC
Q 014177 108 ------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ------~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~~~~~~~id~li~~ag~~ 100 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKV 100 (257)
T ss_pred HHHhhCCCCEEEECCccc
Confidence 589999999853
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.1e-09 Score=100.28 Aligned_cols=80 Identities=21% Similarity=0.369 Sum_probs=66.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++|+||+|++|+++++.|+++ +++|++.+|+..+.+.+.+.+ +.++.++.+|++|.+++.++++ +
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999987 789999999987766655443 3457788999999998887765 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|+||||+|...
T Consensus 79 id~vi~~ag~~~ 90 (263)
T PRK06181 79 IDILVNNAGITM 90 (263)
T ss_pred CCEEEECCCccc
Confidence 899999998654
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.3e-09 Score=99.55 Aligned_cols=81 Identities=20% Similarity=0.341 Sum_probs=67.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++++++|+||+|++|+.+++.|+++ |++|++++|+.++.+.+.+.+ +.++.++++|++|.+++.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999997 789999999988776665543 2467889999999998877665
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+|||++|...
T Consensus 83 ~id~lv~~ag~~~ 95 (241)
T PRK07454 83 CPDVLINNAGMAY 95 (241)
T ss_pred CCCEEEECCCccC
Confidence 5899999998643
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.3e-09 Score=99.77 Aligned_cols=79 Identities=19% Similarity=0.293 Sum_probs=66.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR----DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~----~~D 110 (429)
||+++|+||+|++|+++++.|+++ |++|++++|+.++.+.+.+.+ ..++.++++|++|.++++++++ ++|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 578999999999999999999997 789999999988776655443 2467899999999988887765 469
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||++|..
T Consensus 79 ~vv~~ag~~ 87 (243)
T PRK07102 79 IVLIAVGTL 87 (243)
T ss_pred EEEECCcCC
Confidence 999999854
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.98 E-value=9e-09 Score=97.18 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=65.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHh-------cC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMAL-------RD 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~-------~~ 108 (429)
++++||+||+|++|+.+++.|+++ |++|++++|+.++.+.+.+.+ +.++.++++|+.|.+++.+++ .+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999987 789999999988777766543 245788999999998665544 46
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+++..
T Consensus 79 ~d~vi~~a~~~ 89 (255)
T TIGR01963 79 LDILVNNAGIQ 89 (255)
T ss_pred CCEEEECCCCC
Confidence 89999999854
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-08 Score=96.58 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=62.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+|+++|+||+|+||+++++.|+++ |++|++.+|+. +..+...+.+ +.++.++++|++|.+++.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999997 78999999864 3333333332 2467899999999988777654
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 80 ~id~vi~~ag~~ 91 (256)
T PRK12745 80 RIDCLVNNAGVG 91 (256)
T ss_pred CCCEEEECCccC
Confidence 689999999853
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.8e-09 Score=98.93 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++|+||+|.||+.+++.|.++ |++|++.+|+.+.++++.+++. .++..+++|++|.+++.++++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGL--GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999997 8899999999888777665542 357788999999887766554
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 85 ~~g~id~li~~ag~~ 99 (257)
T PRK09242 85 HWDGLHILVNNAGGN 99 (257)
T ss_pred HcCCCCEEEECCCCC
Confidence 689999999863
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.7e-09 Score=99.91 Aligned_cols=76 Identities=22% Similarity=0.297 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
+++++++|+||+|++|+++++.|+++ |+ +|++.+|+.++++. .+.++.++++|+.|.+++.++++ .+|+|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 56689999999999999999999987 77 99999999876554 33468899999999999888776 58999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
||++|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999987
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.8e-09 Score=99.95 Aligned_cols=82 Identities=23% Similarity=0.372 Sum_probs=69.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+++++++|+||+|++|+.+++.|+++ |++|++++|+.++++.+..++ +.++.++++|++|.+++.++++
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 356789999999999999999999997 899999999988887776554 2467889999999988777654
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~id~lv~~ag~~ 91 (263)
T PRK09072 80 GINVLINNAGVN 91 (263)
T ss_pred CCCEEEECCCCC
Confidence 579999999864
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-08 Score=92.98 Aligned_cols=81 Identities=25% Similarity=0.428 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVST---LGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++|+|+||+|++|+++++.|+++ ++++++..|+.. ..+.+... .+.++.++.+|+.|.+++.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 788877666543 33333332 23467889999999998887764
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~~~id~vi~~ag~~ 95 (249)
T PRK12825 82 FGRIDILVNNAGIF 95 (249)
T ss_pred cCCCCEEEECCccC
Confidence 579999999843
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.6e-09 Score=99.41 Aligned_cols=83 Identities=17% Similarity=0.256 Sum_probs=66.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc--
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.++++|+++|+||+++||+++++.|++. |++|++.+| +.++++.+.+.+ +.++.++++|++|.++++++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3477899999999999999999999997 889888764 555555554433 2357889999999988877665
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 82 ~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 82 DEDFDRVDFFISNAIIS 98 (260)
T ss_pred HHhcCCccEEEECcccc
Confidence 589999999753
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.8e-09 Score=102.46 Aligned_cols=81 Identities=22% Similarity=0.330 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHh-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMAL----- 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~----- 106 (429)
|++++++|+||+|++|+++++.|+++ |++|++++|+.+.++.+.+... .++.++.+|++|.+++.+ +
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~ 77 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLK 77 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHH
Confidence 35678999999999999999999997 8999999999887766654321 357889999999988765 3
Q ss_pred --cCccEEEecCCCCC
Q 014177 107 --RDVDLVVHAAGPFQ 120 (429)
Q Consensus 107 --~~~DvVi~~agp~~ 120 (429)
.++|+||||+|...
T Consensus 78 ~~~~id~vv~~ag~~~ 93 (280)
T PRK06914 78 EIGRIDLLVNNAGYAN 93 (280)
T ss_pred hcCCeeEEEECCcccc
Confidence 25799999998643
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.9e-09 Score=98.61 Aligned_cols=81 Identities=22% Similarity=0.385 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++..+++|++|.+++.++++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999987 789999999988766655443 3467889999999988887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 83 g~id~li~~ag~~ 95 (253)
T PRK06172 83 GRLDYAFNNAGIE 95 (253)
T ss_pred CCCCEEEECCCCC
Confidence 469999999854
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1e-08 Score=97.11 Aligned_cols=83 Identities=17% Similarity=0.232 Sum_probs=66.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++++++|+||+|+||+++++.|++. |++|++.+|+.+ .++.+.+.+ +.++..+++|++|.+++.++++
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 367799999999999999999999997 899999998754 344444433 3457789999999998887765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
+.|+||||+|...
T Consensus 83 ~~g~id~li~~ag~~~ 98 (254)
T PRK06114 83 ELGALTLAVNAAGIAN 98 (254)
T ss_pred HcCCCCEEEECCCCCC
Confidence 4799999998643
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.8e-09 Score=98.92 Aligned_cols=97 Identities=23% Similarity=0.280 Sum_probs=77.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+||+|.+|+.+++.|++. +++|++..|+..+ .+.+.. ..++.+.+|+.|.+++.++++++|.||.+.++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~~---~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQA---LGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHHH---TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhhc---ccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 799999999999999999995 8999999998743 333332 357889999999999999999999999998854
Q ss_pred CC---CchHHHHHHHHHcCCcEEEeCC
Q 014177 120 QQ---APKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 120 ~~---~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.. ....++++||.++|++++-.++
T Consensus 76 ~~~~~~~~~~li~Aa~~agVk~~v~ss 102 (233)
T PF05368_consen 76 HPSELEQQKNLIDAAKAAGVKHFVPSS 102 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHT-SEEEESE
T ss_pred hhhhhhhhhhHHHhhhccccceEEEEE
Confidence 22 2347899999999999886553
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.4e-09 Score=113.69 Aligned_cols=136 Identities=22% Similarity=0.302 Sum_probs=92.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
.+.|+||||||+||+|+++++.|.++ +++|... ..|++|.+.+...++ ++|+|||
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~~---------------------~~~l~d~~~v~~~i~~~~pd~Vih 434 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQ--GIAYEYG---------------------KGRLEDRSSLLADIRNVKPTHVFN 434 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhC--CCeEEee---------------------ccccccHHHHHHHHHhhCCCEEEE
Confidence 45578999999999999999999986 6776321 135677777777766 7999999
Q ss_pred cCCCCC---C---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-------HhhHHHHHHcCCcEEecC
Q 014177 115 AAGPFQ---Q---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-------KSFKDRAIAANIPAITTG 169 (429)
Q Consensus 115 ~agp~~---~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-------~~~~~~a~~~g~~~i~~~ 169 (429)
||+... . .++.+++++|.+.|++.+.++++..|.... .++.|. ..+. ..
T Consensus 435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~----~~~~--~~ 508 (668)
T PLN02260 435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEE----DKPN--FT 508 (668)
T ss_pred CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcC----CCCC--CC
Confidence 997541 0 246789999999999988887655442110 112211 1110 11
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGT 207 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~ 207 (429)
...||.||++++.++..+. +...+|+.+ .++.
T Consensus 509 ~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~-~~~~ 540 (668)
T PLN02260 509 GSFYSKTKAMVEELLREYD-----NVCTLRVRM-PISS 540 (668)
T ss_pred CChhhHHHHHHHHHHHhhh-----hheEEEEEE-eccc
Confidence 2569999999999997653 455667644 3543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.6e-09 Score=98.53 Aligned_cols=80 Identities=20% Similarity=0.316 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC-------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD------- 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~------- 108 (429)
+++++++|+||+|+||+++++.|++. |++|++.++ +.++.+.+...++.++.++++|++|.+++.+++++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 45689999999999999999999987 788887654 55666666665555688899999999988877652
Q ss_pred -ccEEEecCCC
Q 014177 109 -VDLVVHAAGP 118 (429)
Q Consensus 109 -~DvVi~~agp 118 (429)
+|++||++|.
T Consensus 81 ~id~li~~ag~ 91 (253)
T PRK08642 81 PITTVVNNALA 91 (253)
T ss_pred CCeEEEECCCc
Confidence 8999999974
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.3e-09 Score=100.62 Aligned_cols=80 Identities=21% Similarity=0.351 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++|+||+|++|+++++.|+++ |+++++.+|+.++. ++.+.+ +.++.++.+|++|.+++.++++
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 477889999999999999999999997 78999999988765 333332 3467899999999998887775
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 81 ~~~id~vi~~ag~ 93 (258)
T PRK08628 81 FGRIDGLVNNAGV 93 (258)
T ss_pred cCCCCEEEECCcc
Confidence 58999999985
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.9e-08 Score=95.35 Aligned_cols=80 Identities=16% Similarity=0.235 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++|+||+ +.||+++++.|++. |++|++.+|+. +.++..+++ ..++..+++|++|.++++++++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 677999999998 68999999999997 89999999984 333333333 2357789999999988877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 82 g~iD~lv~nAg~~ 94 (252)
T PRK06079 82 GKIDGIVHAIAYA 94 (252)
T ss_pred CCCCEEEEccccc
Confidence 589999999854
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.4e-09 Score=108.17 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
..+++++||||+|.||+++++.|+++ |++|++.+|+.++++.+.+.++.++..+++|++|.+++.++++ .+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999999999999999999997 7899999999998888887776667789999999998887765 58
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++|||||..
T Consensus 345 d~li~nAg~~ 354 (520)
T PRK06484 345 DVLVNNAGIA 354 (520)
T ss_pred CEEEECCCCc
Confidence 9999999864
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-08 Score=95.11 Aligned_cols=82 Identities=24% Similarity=0.344 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec----CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc--
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR----NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R----~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
+++|+++|+||+|++|+++++.|+++ |++|++.+| +.+..+.+.+++ +.++.++.+|+.|.+++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999999999999999999997 789988765 334444443333 2467889999999998887764
Q ss_pred -----CccEEEecCCCCC
Q 014177 108 -----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -----~~DvVi~~agp~~ 120 (429)
++|.|||++|...
T Consensus 82 ~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 82 VEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6899999998654
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.9e-08 Score=94.08 Aligned_cols=82 Identities=22% Similarity=0.257 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++|+|+||+|++|+++++.|++. |++|++.+|+.++++.+.+.+. .++.++++|++|.+++.++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLN 80 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999987 8899999999888776654433 357889999999998877654
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|.+||+++.+.
T Consensus 81 ~id~ii~~ag~~~ 93 (238)
T PRK05786 81 AIDGLVVTVGGYV 93 (238)
T ss_pred CCCEEEEcCCCcC
Confidence 4699999997543
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.1e-09 Score=99.96 Aligned_cols=81 Identities=16% Similarity=0.297 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+++++++|+||+|+||+++++.|+++ |++|++.+|+. +..+++.+. .+.++.++++|++|.+++.++++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 466789999999999999999999997 89999887653 334444332 23457789999999988776654
Q ss_pred ----CccEEEecCCC
Q 014177 108 ----DVDLVVHAAGP 118 (429)
Q Consensus 108 ----~~DvVi~~agp 118 (429)
++|++||++|.
T Consensus 124 ~~~g~id~lv~~Ag~ 138 (294)
T PRK07985 124 KALGGLDIMALVAGK 138 (294)
T ss_pred HHhCCCCEEEECCCC
Confidence 57999999985
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-08 Score=98.51 Aligned_cols=81 Identities=20% Similarity=0.320 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|++||+||+|+||+++++.|++. |++|++..++.+ ..+++.+.+ +.++.++++|++|.++++++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999997 889988876543 233333322 3457789999999988877764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 131 ~~g~iD~lV~nAg~~ 145 (300)
T PRK06128 131 ELGGLDILVNIAGKQ 145 (300)
T ss_pred HhCCCCEEEECCccc
Confidence 689999999853
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.4e-09 Score=97.36 Aligned_cols=82 Identities=21% Similarity=0.348 Sum_probs=68.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+|++++++|+||+|++|+.+++.|+++ |++|++.+|++++.+.+...+ +.++.++.+|+.|.+++.++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 466789999999999999999999997 789999999988776655443 2467888999999988877765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
.+|.|||++|..
T Consensus 80 ~~~id~vi~~ag~~ 93 (246)
T PRK05653 80 FGALDILVNNAGIT 93 (246)
T ss_pred hCCCCEEEECCCcC
Confidence 469999999754
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.7e-09 Score=111.13 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=70.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
..+.+++++|+||+|+||+++++.|+++ |++|++++|+.++++++.+.+ +.++.++++|++|.+++.++++
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4467789999999999999999999997 889999999988877766554 2457889999999998887765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 389 ~~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 389 EHGVPDIVVNNAGIGM 404 (582)
T ss_pred hcCCCcEEEECCccCC
Confidence 4899999998643
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.5e-09 Score=97.57 Aligned_cols=81 Identities=19% Similarity=0.297 Sum_probs=65.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+.+..+ ....+ ..++..+++|++|.+++.++++
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAE-VAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHH-HHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 366789999999999999999999997 889999999876433 22332 2356789999999998877765
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 89 ~~d~vi~~ag~~ 100 (255)
T PRK06841 89 RIDILVNSAGVA 100 (255)
T ss_pred CCCEEEECCCCC
Confidence 579999999864
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.2e-09 Score=98.81 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=63.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc--------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV-------- 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~-------- 109 (429)
||+++|+||+|++|+++++.|+++ |++|++.+|+. +.++.+.+..+.++.++++|++|.++++++++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 468999999999999999999997 78999999987 4555555444456889999999999888877522
Q ss_pred ---cEEEecCCC
Q 014177 110 ---DLVVHAAGP 118 (429)
Q Consensus 110 ---DvVi~~agp 118 (429)
+++||++|.
T Consensus 79 ~~~~~~v~~ag~ 90 (251)
T PRK06924 79 VSSIHLINNAGM 90 (251)
T ss_pred CCceEEEEccee
Confidence 278899874
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.3e-09 Score=97.13 Aligned_cols=81 Identities=17% Similarity=0.214 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+. .++.++++|++|.+++.++++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 55789999999999999999999997 7899999999887776665542 357889999999998887764
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 83 ~~id~vi~~ag~~ 95 (250)
T PRK12939 83 GGLDGLVNNAGIT 95 (250)
T ss_pred CCCCEEEECCCCC
Confidence 689999999864
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.5e-08 Score=93.91 Aligned_cols=79 Identities=14% Similarity=0.261 Sum_probs=66.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++|+||+|++|+++++.|+++ +++|++.+|+.++++++...+. .++.++++|++|.+++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999997 7899999999888776655432 357889999999988776654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~id~vi~~ag~~ 92 (248)
T PRK08251 80 GGLDRVIVNAGIG 92 (248)
T ss_pred CCCCEEEECCCcC
Confidence 689999999753
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.4e-08 Score=94.58 Aligned_cols=173 Identities=18% Similarity=0.141 Sum_probs=116.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHH--HHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAM--VSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l--~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
..+..+.|+||+||+|+.++..|.+. |.+|++--|..+. ...+ ..++ +++-+...|+.|+++++++++..++||
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk~sNVVI 135 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVKHSNVVI 135 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhc--CCeEEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHHhCcEEE
Confidence 34456899999999999999999997 7899987774432 2222 1223 468889999999999999999999999
Q ss_pred ecCCCCCC-----------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 114 HAAGPFQQ-----------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 114 ~~agp~~~-----------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
|+.|--.. .+...+++.|.+.|+ ++|.+|.-.. . +-+++-+--+|..++
T Consensus 136 NLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-----------------n--v~s~Sr~LrsK~~gE 196 (391)
T KOG2865|consen 136 NLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-----------------N--VKSPSRMLRSKAAGE 196 (391)
T ss_pred EeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-----------------c--ccChHHHHHhhhhhH
Confidence 99984321 245788999999998 4565552110 0 111122334677777
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHHhCCceEEeeCCeEEEe
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITL 237 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~~~~~~~v~~~G~~~~v 237 (429)
..++ +.+.+.+++|.+ ..+|..+.--..+.+.+.. -.+++.|..|+-+..
T Consensus 197 ~aVr----dafPeAtIirPa-~iyG~eDrfln~ya~~~rk-~~~~pL~~~GekT~K 246 (391)
T KOG2865|consen 197 EAVR----DAFPEATIIRPA-DIYGTEDRFLNYYASFWRK-FGFLPLIGKGEKTVK 246 (391)
T ss_pred HHHH----hhCCcceeechh-hhcccchhHHHHHHHHHHh-cCceeeecCCcceee
Confidence 7776 457888899984 4577655322223334443 357788888865443
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.9e-09 Score=112.38 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=76.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+||||||+||||+++++.|+++ |++|++.+|+.... ...+++++++|+.|.. +.++++++|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHDA------LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhhc------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC
Confidence 47999999999999999999997 79999999875431 1135789999999985 778888999999999754
Q ss_pred CC-------CchHHHHHHHHHcCCcEEEeCCC
Q 014177 120 QQ-------APKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~-------~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
.. .++.+++++|.+.|++.|.+|+.
T Consensus 72 ~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~ 103 (699)
T PRK12320 72 TSAPGGVGITGLAHVANAAARAGARLLFVSQA 103 (699)
T ss_pred ccchhhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 21 23567888998888877766643
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.4e-09 Score=100.82 Aligned_cols=88 Identities=17% Similarity=0.246 Sum_probs=69.6
Q ss_pred CccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHh
Q 014177 31 AHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 31 ~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
++.+.++++++++|+||+|+||+++++.|+++ |++|++.+++. ++++.+.+++ +.++.++++|++|.+++.+++
T Consensus 4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~ 81 (306)
T PRK07792 4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELV 81 (306)
T ss_pred ccCCcCCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 34455678899999999999999999999997 88999988753 4455554443 346788999999998888776
Q ss_pred c------CccEEEecCCCCC
Q 014177 107 R------DVDLVVHAAGPFQ 120 (429)
Q Consensus 107 ~------~~DvVi~~agp~~ 120 (429)
+ ++|+|||+||...
T Consensus 82 ~~~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 82 ATAVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHHHhCCCCEEEECCCCCC
Confidence 4 5899999998643
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.7e-09 Score=100.07 Aligned_cols=79 Identities=15% Similarity=0.255 Sum_probs=66.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+|+++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.+. .++.++++|++|.+++.++++ +
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999997 8899999999887777665442 467889999999988877664 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 79 id~lI~~ag~~ 89 (252)
T PRK07677 79 IDALINNAAGN 89 (252)
T ss_pred ccEEEECCCCC
Confidence 79999999853
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.8e-09 Score=97.63 Aligned_cols=78 Identities=14% Similarity=0.244 Sum_probs=62.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
++|+++|+||+|+||+++++.|+++ |++|++.+|+.+......+.. ++.++.+|++|.+++.++++ ++|
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 3579999999999999999999987 899999999876543322222 36789999999988777654 489
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
++||++|..
T Consensus 77 ~lv~~ag~~ 85 (236)
T PRK06483 77 AIIHNASDW 85 (236)
T ss_pred EEEECCccc
Confidence 999999853
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.6e-09 Score=100.52 Aligned_cols=82 Identities=21% Similarity=0.287 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc---------hhHHHHHHHh---CCCcEEEEeeCCChHHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR---------EKGAAMVSTL---GKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~---------~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~ 104 (429)
+++++++|+||++.||+++++.|++. |++|++.+|+. ++++.+.+++ +.++.++.+|++|.+++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 56789999999999999999999997 88999988875 5566655554 2356788999999988777
Q ss_pred Hhc-------CccEEEecCCCCC
Q 014177 105 ALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 105 ~~~-------~~DvVi~~agp~~ 120 (429)
+++ ++|++|||||...
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCC
Confidence 654 6899999998643
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.4e-09 Score=98.85 Aligned_cols=80 Identities=14% Similarity=0.196 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|.++||||+ +.||+++++.|++. |++|++.+|+. ++++++.++++.. ..+++|++|.++++++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 567999999996 67999999999997 89999999985 3444454444433 578999999998877764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 80 ~~g~iDilVnnAG~~ 94 (274)
T PRK08415 80 DLGKIDFIVHSVAFA 94 (274)
T ss_pred HcCCCCEEEECCccC
Confidence 589999999854
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.5e-09 Score=97.14 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=63.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
|+|+++|+||+|++|+.+++.|+++ +++|++.. |+.++++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 3679999999999999999999997 78887754 6666665554443 2467899999999988776654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 79 ~~id~li~~ag~~ 91 (248)
T PRK06947 79 GRLDALVNNAGIV 91 (248)
T ss_pred CCCCEEEECCccC
Confidence 689999999864
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.9e-09 Score=97.62 Aligned_cols=79 Identities=24% Similarity=0.356 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|++++|+|+||+|+||+++++.|+++ |++|++.+|+..+++...+.+. ..++++|++|.++++++++ ++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEAGKAAADEVG--GLFVPTDVTDEDAVNALFDTAAETYGSV 80 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcC--CcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 77899999999999999999999997 8999999999887776666553 3678999999998887775 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 81 d~vi~~ag~~ 90 (255)
T PRK06057 81 DIAFNNAGIS 90 (255)
T ss_pred CEEEECCCcC
Confidence 9999999854
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.2e-08 Score=95.29 Aligned_cols=81 Identities=19% Similarity=0.272 Sum_probs=66.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+++++++|+||+|++|+.+++.|+++ |++|++.+|+.++..+..+++. ...+.+.+|+.|.+++.++++ +
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 45689999999999999999999997 8999999998877655444332 346788899999988877665 6
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 83 ~d~vi~~ag~~ 93 (239)
T PRK12828 83 LDALVNIAGAF 93 (239)
T ss_pred cCEEEECCccc
Confidence 89999999854
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2e-08 Score=94.26 Aligned_cols=79 Identities=23% Similarity=0.349 Sum_probs=63.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
|++++|+||+|+||+++++.|+++ |++|++ ..|+.++.++....+ +.++..+++|++|.+++.++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999987 788876 467776666554433 2357789999999998888766
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 79 ~id~vi~~ag~~ 90 (247)
T PRK09730 79 PLAALVNNAGIL 90 (247)
T ss_pred CCCEEEECCCCC
Confidence 468999999864
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=95.54 Aligned_cols=81 Identities=9% Similarity=0.156 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++|+||++.+|+++++.|+++ |++|++.+|+.++++++.+++ +.++..+++|+.|.++++++++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARL--GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999997 899999999999887776544 2356778899999998877653
Q ss_pred ---CccEEEecCCC
Q 014177 108 ---DVDLVVHAAGP 118 (429)
Q Consensus 108 ---~~DvVi~~agp 118 (429)
++|++||++|.
T Consensus 80 ~g~~iD~li~nag~ 93 (227)
T PRK08862 80 FNRAPDVLVNNWTS 93 (227)
T ss_pred hCCCCCEEEECCcc
Confidence 58999999973
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-08 Score=97.11 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++++|+||+|.||+++++.|++. |++|++.+++.. ..+++ ..++.++..+++|++|.+++.++++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQV-TALGRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHH-HhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 477899999999999999999999997 889988877542 12222 2233457788999999988887775
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 84 ~~~D~li~~Ag~~ 96 (253)
T PRK08993 84 GHIDILVNNAGLI 96 (253)
T ss_pred CCCCEEEECCCCC
Confidence 589999999854
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.5e-08 Score=94.55 Aligned_cols=153 Identities=19% Similarity=0.137 Sum_probs=104.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC----CcEEEEeeCCChHH----HHHHh
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK----NSEFAEVNIYNEGS----LLMAL 106 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~----~v~~~~~Dl~d~~~----l~~~~ 106 (429)
+++. +=.+|+||+..||++.+++|+++ |++|++.+|+.+|++++++++.+ .+.++.+|.++.+. +.+.+
T Consensus 46 ~~~g-~WAVVTGaTDGIGKayA~eLAkr--G~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014|consen 46 EKLG-SWAVVTGATDGIGKAYARELAKR--GFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred HhcC-CEEEEECCCCcchHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh
Confidence 3344 66899999999999999999998 89999999999999999888752 36778899987664 55555
Q ss_pred cC--ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHH--HHHHhhHHHHHHcCCcEEecCCCc---------c
Q 014177 107 RD--VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYS--QRAKSFKDRAIAANIPAITTGGIY---------P 173 (429)
Q Consensus 107 ~~--~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~--~~~~~~~~~a~~~g~~~i~~~g~~---------p 173 (429)
.+ +-++|||+|...... ..+.+.-...-.+.+.++...... +...+ ....+.+|..+.+|++.. |
T Consensus 123 ~~~~VgILVNNvG~~~~~P-~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp-~M~~r~~G~IvnigS~ag~~p~p~~s~y 200 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYDYP-ESFLKYPEGELQNIINVNILSVTLLTQLILP-GMVERKKGIIVNIGSFAGLIPTPLLSVY 200 (312)
T ss_pred cCCceEEEEecccccCCCc-HHHHhCchhhhhheeEEecchHHHHHHHhhh-hhhcCCCceEEEeccccccccChhHHHH
Confidence 54 557999999877543 355554332223455555443322 22221 222346676666665433 6
Q ss_pred chhHHHHHHHHHHHHhhcC
Q 014177 174 GVSNVMAAELVRVARNESK 192 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~ 192 (429)
.+||.+.++..+.+.+|+.
T Consensus 201 sasK~~v~~~S~~L~~Ey~ 219 (312)
T KOG1014|consen 201 SASKAFVDFFSRCLQKEYE 219 (312)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6678877777777666554
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-08 Score=96.94 Aligned_cols=78 Identities=22% Similarity=0.348 Sum_probs=65.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
|.++|+||++.||.++++.|. + +++|++++|+.++++++.+++. ..+.++++|++|.++++++++ +
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 579999999999999999998 4 6899999999998887766653 236789999999988877654 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
.|++||++|...
T Consensus 78 id~lv~nag~~~ 89 (246)
T PRK05599 78 ISLAVVAFGILG 89 (246)
T ss_pred CCEEEEecCcCC
Confidence 899999998753
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-09 Score=96.72 Aligned_cols=80 Identities=23% Similarity=0.412 Sum_probs=66.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC--chhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN--REKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~--~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
|.++|+||++.+|+.+++.|+++ .+..|++.+|+ .+..+.+.+++. .++.++++|+++.++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR-GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57999999999999999999997 35688889998 566666655443 568899999999998888765
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
..|++|||+|...
T Consensus 80 ~ld~li~~ag~~~ 92 (167)
T PF00106_consen 80 PLDILINNAGIFS 92 (167)
T ss_dssp SESEEEEECSCTT
T ss_pred ccccccccccccc
Confidence 6899999998765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.7e-09 Score=98.26 Aligned_cols=79 Identities=19% Similarity=0.379 Sum_probs=66.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|+++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+ +.++.++++|++|.+++.++++ ++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999999997 899999999988877665543 2467889999999988877765 68
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+|||++|...
T Consensus 79 d~lI~~ag~~~ 89 (270)
T PRK05650 79 DVIVNNAGVAS 89 (270)
T ss_pred CEEEECCCCCC
Confidence 99999998643
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1e-08 Score=97.56 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCCh-HHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----C-CCcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTG-RVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----G-KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G-~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~-~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.+++++++|+||+| .||+++++.|+++ |++|++.+|+.++++...+.+ + .++.++++|++|.++++++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 35678999999987 6999999999987 789999999988776655443 2 257789999999988877664
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 92 ~~~~g~id~li~~ag~~ 108 (262)
T PRK07831 92 VERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999853
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.6e-08 Score=95.86 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.+.+|+++|+||+|+||+++++.|+++ |++|++.+++.+ ..+.+.. .++.++++|++|.+++.++++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAENEAKELRE---KGVFTIKCDVGNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHh---CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 356789999999999999999999997 789888776543 3334432 247889999999998888765
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 79 ~id~li~~ag~~ 90 (255)
T PRK06463 79 RVDVLVNNAGIM 90 (255)
T ss_pred CCCEEEECCCcC
Confidence 589999999864
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.2e-07 Score=88.87 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCC--hHHHHHHh----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYN--EGSLLMAL---- 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d--~~~l~~~~---- 106 (429)
|++++++|+||+|++|+++++.|+++ |++|++.+|+.++++.+.+++. ..+.++.+|+.| .+++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence 66789999999999999999999987 8899999999988777665542 245678899975 33444332
Q ss_pred ----cCccEEEecCCCC
Q 014177 107 ----RDVDLVVHAAGPF 119 (429)
Q Consensus 107 ----~~~DvVi~~agp~ 119 (429)
.++|+||||||..
T Consensus 82 ~~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 82 EATQGKLDGIVHCAGYF 98 (239)
T ss_pred HHhCCCCCEEEEecccc
Confidence 3679999999853
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.1e-09 Score=101.07 Aligned_cols=93 Identities=19% Similarity=0.294 Sum_probs=75.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh------cC-ccEEE
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL------RD-VDLVV 113 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~------~~-~DvVi 113 (429)
+|+|+||+|++|+++++.|+++ +++|++..|++++... .+++.+.+|+.|.+++.+++ ++ +|.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~~~------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSSAG------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccccC------CCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 4899999999999999999997 7999999999876421 35677889999999999988 56 99999
Q ss_pred ecCCCCCC--CchHHHHHHHHHcCCcEEEe
Q 014177 114 HAAGPFQQ--APKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 114 ~~agp~~~--~~~~~v~~aa~~~gv~~vdi 141 (429)
++++.... ....+++++|.++|++++-.
T Consensus 73 ~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~ 102 (285)
T TIGR03649 73 LVAPPIPDLAPPMIKFIDFARSKGVRRFVL 102 (285)
T ss_pred EeCCCCCChhHHHHHHHHHHHHcCCCEEEE
Confidence 99875432 12357899999999976533
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.5e-09 Score=96.75 Aligned_cols=82 Identities=21% Similarity=0.349 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhcC----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALRD---- 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~---- 108 (429)
+++++++|+||+|++|+++++.|+++ +++|++.. |+.+..+++.+.+. .++.++++|++|.+++.+++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 78887754 45555555544432 3578899999999988887763
Q ss_pred ---ccEEEecCCCCC
Q 014177 109 ---VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ---~DvVi~~agp~~ 120 (429)
+|+||||+|...
T Consensus 82 ~~~id~vi~~ag~~~ 96 (247)
T PRK12935 82 FGKVDILVNNAGITR 96 (247)
T ss_pred cCCCCEEEECCCCCC
Confidence 799999998643
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.4e-08 Score=96.21 Aligned_cols=82 Identities=26% Similarity=0.317 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++.+++++|+||+|+||+.+++.|+++ |++|++.+|+.++++.+.+++ +.++.++.+|++|.+++.++++
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999987 899999999988777666544 2457899999999988877665
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 86 ~~~id~vi~~ag~~ 99 (256)
T PRK06124 86 HGRLDILVNNVGAR 99 (256)
T ss_pred cCCCCEEEECCCCC
Confidence 469999999854
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.89 E-value=7e-09 Score=111.79 Aligned_cols=82 Identities=24% Similarity=0.344 Sum_probs=69.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+.+|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+. .++..+++|++|.+++.++++
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 366799999999999999999999997 8999999999887776655432 246688999999998888776
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 489 ~~~g~iDilV~nAG~~ 504 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIA 504 (676)
T ss_pred HhcCCCcEEEECCCCC
Confidence 689999999864
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.9e-09 Score=97.17 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=63.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
.+++|+++|+||+|++|+.+++.|+++ |++|++.+|+. . ...+.++.++++|++|.+++.++++ +
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~--~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAF--L----TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecch--h----hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 366789999999999999999999997 89999999986 1 1123467889999999998888775 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||+|..
T Consensus 77 id~vi~~ag~~ 87 (252)
T PRK08220 77 LDVLVNAAGIL 87 (252)
T ss_pred CCEEEECCCcC
Confidence 79999999864
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.5e-08 Score=94.66 Aligned_cols=79 Identities=15% Similarity=0.272 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
+++++|+|+||+|+||+++++.|+++ |++|++.++ +.++++++..++ .+.++.+|++|.+++.++++ ++|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~--~~~~~~~D~~~~~~~~~~~~~~~~id~l 79 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSKDAAERLAQET--GATAVQTDSADRDAVIDVVRKSGALDIL 79 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHh--CCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence 66789999999999999999999987 788888765 556666665544 35778899999888877765 48999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||++|..
T Consensus 80 i~~ag~~ 86 (237)
T PRK12742 80 VVNAGIA 86 (237)
T ss_pred EECCCCC
Confidence 9999854
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-08 Score=96.25 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++|+||+|+||+++++.|++. |++|++.+ |+.++++....++ +..+..+++|++|.+++..+++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999997 88888865 5556655554443 2346678899999876654332
Q ss_pred --------CccEEEecCCCC
Q 014177 108 --------DVDLVVHAAGPF 119 (429)
Q Consensus 108 --------~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~ 99 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIG 99 (252)
T ss_pred hhhhcCCCCCCEEEECCCcC
Confidence 589999999853
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-08 Score=95.65 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc---Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---~~ 109 (429)
+.+++++|+||+|.+|+.+++.|+++ |++|++.+|+.++++.+.+.+ +.++.++.+|++|.+++.++++ ++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 56789999999999999999999997 889999999988877765544 2357889999999998887765 69
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++|||+|..
T Consensus 83 d~lv~~ag~~ 92 (259)
T PRK06125 83 DILVNNAGAI 92 (259)
T ss_pred CEEEECCCCC
Confidence 9999999854
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2e-08 Score=94.37 Aligned_cols=77 Identities=18% Similarity=0.288 Sum_probs=61.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----------- 107 (429)
|++++|+||+|++|+++++.|+++ |++|++++|+.++. +....+.++.++++|++|.++++++++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 468999999999999999999987 89999999986542 222233467889999999988877432
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
+.|++|||+|..
T Consensus 77 ~~~~~v~~ag~~ 88 (243)
T PRK07023 77 SRVLLINNAGTV 88 (243)
T ss_pred CceEEEEcCccc
Confidence 478999999864
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.4e-08 Score=96.45 Aligned_cols=75 Identities=28% Similarity=0.437 Sum_probs=62.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+.+.. ...++.++++|++|.+++.++++ +
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPDD------LPEGVEFVAADLTTAEGCAAVARAVLERLGG 77 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhhh------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999997 89999999986531 22457889999999987776543 6
Q ss_pred ccEEEecCCC
Q 014177 109 VDLVVHAAGP 118 (429)
Q Consensus 109 ~DvVi~~agp 118 (429)
+|+|||+||.
T Consensus 78 id~vi~~ag~ 87 (260)
T PRK06523 78 VDILVHVLGG 87 (260)
T ss_pred CCEEEECCcc
Confidence 8999999985
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.5e-08 Score=93.59 Aligned_cols=81 Identities=16% Similarity=0.296 Sum_probs=64.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++++|+||+|++|+++++.|+++ |+++++..|+.+ ..+.+.+.+ +.++.++++|++|.+++.++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 788887776543 334443332 3467889999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~~id~vi~~ag~~ 94 (245)
T PRK12937 81 FGRIDVLVNNAGVM 94 (245)
T ss_pred cCCCCEEEECCCCC
Confidence 689999999854
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.9e-08 Score=90.60 Aligned_cols=80 Identities=20% Similarity=0.223 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+.+++++|+||+|+||+++++.|+++ ++++++..|+ .+........ .+.++..+.+|+++.+++..+++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 55789999999999999999999987 7888776653 3333332222 22346688999999998877665
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||++|.
T Consensus 82 ~~~~d~vi~~ag~ 94 (252)
T PRK06077 82 YGVADILVNNAGL 94 (252)
T ss_pred cCCCCEEEECCCC
Confidence 57999999985
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.1e-08 Score=94.98 Aligned_cols=81 Identities=20% Similarity=0.289 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++|+|+||+|+||+++++.|.++ |+++++.+|+.++.+.+.+.+ +.++.++.+|++|.+++.++++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 66899999999999999999999997 889999999988777665543 2357788999999998877654
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++|||+|..
T Consensus 87 ~~~d~li~~ag~~ 99 (255)
T PRK06113 87 GKVDILVNNAGGG 99 (255)
T ss_pred CCCCEEEECCCCC
Confidence 579999999853
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.3e-08 Score=97.66 Aligned_cols=80 Identities=21% Similarity=0.249 Sum_probs=64.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----------hhHHHHHHHh---CCCcEEEEeeCCChHHH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----------EKGAAMVSTL---GKNSEFAEVNIYNEGSL 102 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----------~~~~~l~~~l---~~~v~~~~~Dl~d~~~l 102 (429)
++++|.++|+||++.||+++++.|++. |++|++.+|+. ++++.+.+.+ +.++.++++|++|.+++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 367799999999999999999999997 89999999973 3444444333 23567889999999988
Q ss_pred HHHhc-------CccEEEecC-C
Q 014177 103 LMALR-------DVDLVVHAA-G 117 (429)
Q Consensus 103 ~~~~~-------~~DvVi~~a-g 117 (429)
+++++ ++|++||++ |
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCcc
Confidence 87764 589999999 6
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=98.86 E-value=2e-08 Score=105.70 Aligned_cols=125 Identities=16% Similarity=0.188 Sum_probs=88.4
Q ss_pred ccccccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchh---HHHHHHH-----------
Q 014177 20 TSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREK---GAAMVST----------- 84 (429)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~---~~~l~~~----------- 84 (429)
.|++..-+.++..-.+.+++++|+|||||||+|+++++.|++.+++. +|.+..|.... .+++.++
T Consensus 100 ~~~~~~~~~~~~~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~ 179 (605)
T PLN02503 100 GSSSAVEMADGIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQ 179 (605)
T ss_pred CCCchhhccCCcchhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHH
Confidence 44555666777777777899999999999999999999999865553 78888885432 2222111
Q ss_pred --h--------CCCcEEEEeeCCCh------HHHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcC-
Q 014177 85 --L--------GKNSEFAEVNIYNE------GSLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETK- 135 (429)
Q Consensus 85 --l--------~~~v~~~~~Dl~d~------~~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~g- 135 (429)
. ..++..+.+|++++ +..+.+.+++|+|||+|+.... .++.+++++|.+.+
T Consensus 180 ~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~ 259 (605)
T PLN02503 180 ETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKK 259 (605)
T ss_pred HhcCccccccccccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 13578899999986 3566666789999999976432 24678899998764
Q ss_pred Cc-EEEeCCC
Q 014177 136 TA-YIDVCDD 144 (429)
Q Consensus 136 v~-~vdis~~ 144 (429)
.+ ++.+|+.
T Consensus 260 lk~fV~vSTa 269 (605)
T PLN02503 260 LKLFLQVSTA 269 (605)
T ss_pred CCeEEEccCc
Confidence 33 4555543
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.8e-08 Score=92.18 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhC----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLG----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
-..++|+|+||+|++|+++++.|++++ +++|++.+|+.++ ++++.+++. .++.++++|++|.+++.++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNA-PARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 356789999999999999999999862 4899999999876 666555442 257899999999887655443
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 85 ~g~id~li~~ag~~ 98 (253)
T PRK07904 85 GGDVDVAIVAFGLL 98 (253)
T ss_pred cCCCCEEEEeeecC
Confidence 699999999864
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-08 Score=94.19 Aligned_cols=81 Identities=28% Similarity=0.394 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++++|+||+|+||+.+++.|.++ |++ |++.+|+.++.+...+.+ +.++.++.+|++|.+++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 66789999999999999999999987 787 999999887766554433 2356778999999988877765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 82 ~g~id~li~~ag~~ 95 (260)
T PRK06198 82 FGRLDALVNAAGLT 95 (260)
T ss_pred hCCCCEEEECCCcC
Confidence 589999999864
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.7e-08 Score=92.81 Aligned_cols=81 Identities=17% Similarity=0.264 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCC--ChHHHHHHh---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIY--NEGSLLMAL--- 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~--d~~~l~~~~--- 106 (429)
.+++++++|+||+|++|.++++.|++. |++|++.+|+.++++.+.+++. .++.++.+|++ +.+++.+++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 357799999999999999999999997 7899999999887776655542 34667788886 444444433
Q ss_pred ----cCccEEEecCCC
Q 014177 107 ----RDVDLVVHAAGP 118 (429)
Q Consensus 107 ----~~~DvVi~~agp 118 (429)
.++|+|||+|+.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 368999999975
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.9e-08 Score=95.71 Aligned_cols=80 Identities=16% Similarity=0.297 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++|+||+|+||+++++.|+++ |++|++++|+.+. .+..+.+ +.++.++++|++|.++++++++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARH--GANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 8999999998753 2222222 2357789999999988887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~id~vi~~ag~~ 93 (263)
T PRK08226 81 GRIDILVNNAGVC 93 (263)
T ss_pred CCCCEEEECCCcC
Confidence 579999999853
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.4e-08 Score=108.04 Aligned_cols=82 Identities=26% Similarity=0.325 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+.+++++|+||+|+||+++++.|.++ |++|++++|+.++++.+.+.+.. ++.++++|++|.+++.++++
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356789999999999999999999987 78999999999888777766543 67889999999998877665
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 497 g~iDvvI~~AG~~ 509 (681)
T PRK08324 497 GGVDIVVSNAGIA 509 (681)
T ss_pred CCCCEEEECCCCC
Confidence 689999999854
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.2e-08 Score=90.32 Aligned_cols=81 Identities=22% Similarity=0.309 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+.+++++|+||+|++|+++++.|+++ |++|++..|+..+ .+.+...+ ..++.++.+|++|.+++.++++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 8899888776543 33433332 2457788899999998877665
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~~id~vi~~ag~~ 94 (248)
T PRK05557 81 FGGVDILVNNAGIT 94 (248)
T ss_pred cCCCCEEEECCCcC
Confidence 589999999854
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.7e-08 Score=93.71 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=64.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----CccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~DvVi 113 (429)
|++++|+||+|++|+++++.|+++ |++|++++|+.++.+++.. ..++++++|++|.++++++++ ++|+||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAALAALQA---LGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 478999999999999999999986 8999999999887776653 246789999999998887642 489999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
|++|..
T Consensus 76 ~~ag~~ 81 (222)
T PRK06953 76 YVAGVY 81 (222)
T ss_pred ECCCcc
Confidence 999875
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=4.2e-08 Score=93.34 Aligned_cols=82 Identities=18% Similarity=0.335 Sum_probs=64.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++++++|+||+|.||+++++.|+++ |+.+++.+|+. +..+.+.+.+ +.++.++.+|++|.+++.++++
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999997 78888888854 3444444333 2356788999999998877664
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 82 ~~g~id~lv~~ag~~ 96 (261)
T PRK08936 82 EFGTLDVMINNAGIE 96 (261)
T ss_pred HcCCCCEEEECCCCC
Confidence 589999999854
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-08 Score=94.83 Aligned_cols=78 Identities=22% Similarity=0.351 Sum_probs=64.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|+++|+||+|+||+++++.|++. |++|++.+|+.+.++.+.+.+ +.++.++.+|++|.+++.++++ .+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999999999999999987 789999999987766655443 2357889999999998877654 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||++|..
T Consensus 79 d~vi~~ag~~ 88 (254)
T TIGR02415 79 DVMVNNAGVA 88 (254)
T ss_pred CEEEECCCcC
Confidence 9999999864
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.9e-07 Score=89.73 Aligned_cols=78 Identities=24% Similarity=0.290 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------C
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------D 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------~ 108 (429)
++|.++|+|+ |+||+++++.|. + |++|++.+|+.++++.+.+++. .++.++++|++|.+++.++++ +
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~ 76 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-A--GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP 76 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence 3567899997 689999999995 4 7899999999887776655543 357789999999998887764 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 77 id~li~nAG~~ 87 (275)
T PRK06940 77 VTGLVHTAGVS 87 (275)
T ss_pred CCEEEECCCcC
Confidence 89999999864
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.6e-08 Score=96.74 Aligned_cols=80 Identities=18% Similarity=0.293 Sum_probs=67.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++|+||++.||.++++.|+++ | ++|++.+|+.++++++.+++. .++.++.+|++|.++++++++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 4679999999999999999999997 7 899999999988877766653 346788999999988877653
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 80 ~~iD~lI~nAG~~ 92 (314)
T TIGR01289 80 RPLDALVCNAAVY 92 (314)
T ss_pred CCCCEEEECCCcc
Confidence 589999999853
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.7e-08 Score=94.69 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=65.4
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecC---chhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRN---REKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~---~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+.+|.++|+||+ +.||+++++.|+++ |++|++.+|+ .++++++.+++. .++..+++|++|.++++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK 82 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 567899999987 68999999999997 8899998765 345666666553 457789999999998877664
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++|||+|..
T Consensus 83 ~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 83 EEVGVIHGVAHCIAFA 98 (257)
T ss_pred HhCCCccEEEECcccC
Confidence 589999999854
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-08 Score=93.82 Aligned_cols=81 Identities=25% Similarity=0.299 Sum_probs=61.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
|.+|.++|+||+|++|+++++.|+++ |++|++. +++..+.+...+++ +.++..+.+|+.|.+++.++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999997 7888774 44444444333332 2356678999999988877664
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+||||+|..
T Consensus 79 ~~~id~li~~ag~~ 92 (246)
T PRK12938 79 VGEIDVLVNNAGIT 92 (246)
T ss_pred hCCCCEEEECCCCC
Confidence 689999999864
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.6e-08 Score=92.85 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=62.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhc-------
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++|+||+|++|+++++.|+++ |++|++.+|+ .++++.+.+.+.. .+..+++|++|.+++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4899999999999999999997 8999999998 6666666655421 23457899999998877664
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+|||++|...
T Consensus 79 ~id~vi~~ag~~~ 91 (251)
T PRK07069 79 GLSVLVNNAGVGS 91 (251)
T ss_pred CccEEEECCCcCC
Confidence 5799999998643
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-08 Score=95.04 Aligned_cols=82 Identities=20% Similarity=0.315 Sum_probs=68.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++++++|+||+|++|+.+++.|+++ ++++++. +|+.++.+.+.+.+. .++.++.+|++|.+++.++++
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467889999999999999999999987 8899998 998887766555432 357889999999998877765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~~~~id~vi~~ag~~ 94 (247)
T PRK05565 80 KFGKIDILVNNAGIS 94 (247)
T ss_pred HhCCCCEEEECCCcC
Confidence 789999999865
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.8e-08 Score=94.48 Aligned_cols=80 Identities=19% Similarity=0.268 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchhH---HHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREKG---AAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~~---~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|.++||||++ .||+++++.|++. |++|++.+|+.... +++.+.++ ....+++|++|.++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHH
Confidence 5678999999985 7999999999997 89999999875433 33333332 23468899999998877764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 82 ~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 82 KWGKLDFVVHAIGFS 96 (271)
T ss_pred HhCCCCEEEECCccC
Confidence 689999999854
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.83 E-value=7e-08 Score=91.88 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCch------hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNRE------KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~------~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+++|.++|+||+ +.||+++++.|++. |++|++.+|+.+ .++++.+.. ..+.++++|++|.++++++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPL-NPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhcc-CcceEeecCcCCHHHHHHHHHH
Confidence 567899999986 67999999999997 889988765432 233333222 246688999999998887765
Q ss_pred ------CccEEEecCCCCCCCc-hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC--------C-C
Q 014177 108 ------DVDLVVHAAGPFQQAP-KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG--------G-I 171 (429)
Q Consensus 108 ------~~DvVi~~agp~~~~~-~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~--------g-~ 171 (429)
++|++|||+|...... ..++.+.-.+.-.+.++++-...+.-. +.+....++.|..+.+++ + .
T Consensus 81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~-~~~~~~m~~~g~Iv~isS~~~~~~~~~~~ 159 (258)
T PRK07370 81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLC-KAAKPLMSEGGSIVTLTYLGGVRAIPNYN 159 (258)
T ss_pred HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHH-HHHHHHHhhCCeEEEEeccccccCCcccc
Confidence 5899999998542100 011221111111122333322222211 111122223454333332 1 2
Q ss_pred ccchhHHHHHHHHHHHHhhcCC
Q 014177 172 YPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|+.||.....+++.+..++..
T Consensus 160 ~Y~asKaal~~l~~~la~el~~ 181 (258)
T PRK07370 160 VMGVAKAALEASVRYLAAELGP 181 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHhCc
Confidence 2788999999998888776654
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.4e-08 Score=87.80 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=79.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+++|+||+|++|. +++.|.++ |++|++.+|+.++++.+...++ .++..+.+|++|.+++.++++ ++|
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK--GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC--cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 47999999998776 99999997 8999999999888777665443 357788899999998888765 578
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCCc-----EEEeCCCh
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKTA-----YIDVCDDT 145 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv~-----~vdis~~~ 145 (429)
++|+.+-.. +..++.++|.+.|++ ++.+-++.
T Consensus 78 ~lv~~vh~~---~~~~~~~~~~~~gv~~~~~~~~h~~gs~ 114 (177)
T PRK08309 78 LAVAWIHSS---AKDALSVVCRELDGSSETYRLFHVLGSA 114 (177)
T ss_pred EEEEecccc---chhhHHHHHHHHccCCCCceEEEEeCCc
Confidence 999887433 337899999999988 67666554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.6e-08 Score=93.45 Aligned_cols=80 Identities=16% Similarity=0.195 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||++ .||+++++.|++. |++|++.+|+. +.++.+.... +....+++|++|.++++++++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQL-GSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhcc-CCceEeecCCCCHHHHHHHHHHHHh
Confidence 5678999999984 7999999999997 88999998873 2223332222 345678899999998888764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 81 ~~g~iD~linnAg~~ 95 (262)
T PRK07984 81 VWPKFDGFVHSIGFA 95 (262)
T ss_pred hcCCCCEEEECCccC
Confidence 589999999854
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.5e-08 Score=104.62 Aligned_cols=80 Identities=24% Similarity=0.430 Sum_probs=70.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
.++++++||||++.||.++++.|+++ |++|++.+|+.++++++.++++.++..+++|++|.++++++++ ++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999999997 8999999999998888877776667889999999998877764 58
Q ss_pred cEEEecCCC
Q 014177 110 DLVVHAAGP 118 (429)
Q Consensus 110 DvVi~~agp 118 (429)
|++||++|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999999985
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-07 Score=88.90 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++++++|+||+|++|+.+++.|+++ |+.|++++|+.++++...+++ +.++.++++|++|.++++++++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 789999999988776665543 3457789999999888776554
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 81 ~~id~vi~~ag~~ 93 (253)
T PRK08217 81 GQLNGLINNAGIL 93 (253)
T ss_pred CCCCEEEECCCcc
Confidence 479999999853
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.3e-08 Score=91.64 Aligned_cols=81 Identities=21% Similarity=0.221 Sum_probs=66.6
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+.+++++|||| ++.||.++++.|+++ |++|++.+|+. +.++++.++++.++.++++|++|.++++++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 82 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH 82 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence 56789999998 788999999999997 89999998764 44566666555567789999999998877654
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~g~iD~li~nAG~~ 96 (256)
T PRK07889 83 VDGLDGVVHSIGFA 96 (256)
T ss_pred cCCCcEEEEccccc
Confidence 689999999854
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-07 Score=89.37 Aligned_cols=99 Identities=17% Similarity=0.248 Sum_probs=78.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc----
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+.+..++.||||||++.+|+.++.+++++ +..+++.|.|.+...+..+... +++....+|++|.+++.+..+
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHH
Confidence 44577899999999999999999999998 7899999999887777666554 368899999999998776654
Q ss_pred ---CccEEEecCCCCCCC----chHHHHHHHHHc
Q 014177 108 ---DVDLVVHAAGPFQQA----PKCTVLEAAIET 134 (429)
Q Consensus 108 ---~~DvVi~~agp~~~~----~~~~v~~aa~~~ 134 (429)
++|++||+||..... -..+.++.+.+.
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 689999999865431 124556666544
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.4e-08 Score=100.72 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++|+++|+||+|++|+++++.|.++ |++|++.+|+.++++.........+..+.+|++|.+++.+.++++|++||+
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 467899999999999999999999987 889999999887665433222234667899999999999999999999999
Q ss_pred CCCC
Q 014177 116 AGPF 119 (429)
Q Consensus 116 agp~ 119 (429)
||..
T Consensus 253 AGi~ 256 (406)
T PRK07424 253 HGIN 256 (406)
T ss_pred CCcC
Confidence 9854
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=4e-08 Score=93.52 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=64.4
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCchh---HHHHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNREK---GAAMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~---~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|.++||||+ +.||+++++.|+++ |++|++.+|+.+. ++++.++++ ....+++|++|.++++++++
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHH
Confidence 4678999999998 47999999999997 8899999998643 344444443 35678999999998887654
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 84 ~~~g~ld~lv~nAg~~ 99 (258)
T PRK07533 84 EEWGRLDFLLHSIAFA 99 (258)
T ss_pred HHcCCCCEEEEcCccC
Confidence 589999999854
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.2e-08 Score=92.78 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=62.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--------Ccc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------DVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------~~D 110 (429)
+++++|+||+|+||+++++.|+++ |++|++.+|+.++++.+.+ .++..+++|+.|.+++.++++ ++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPDDVARMNS---LGFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 368999999999999999999987 7899999999888766543 247889999999887766543 468
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
.+||++|..
T Consensus 77 ~ii~~ag~~ 85 (256)
T PRK08017 77 GLFNNAGFG 85 (256)
T ss_pred EEEECCCCC
Confidence 999999853
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.9e-08 Score=94.18 Aligned_cols=81 Identities=17% Similarity=0.284 Sum_probs=64.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++|+||+|+||+++++.|+++ |++|++.++ +.+.++.+.+.+ +.++.++++|++|.++++++++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999997 889988764 555555544433 3468899999999988777664
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
.+|+|||++|...
T Consensus 79 ~~id~li~~ag~~~ 92 (256)
T PRK12743 79 GRIDVLVNNAGAMT 92 (256)
T ss_pred CCCCEEEECCCCCC
Confidence 5899999998643
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.7e-08 Score=91.76 Aligned_cols=153 Identities=18% Similarity=0.195 Sum_probs=97.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHh---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMAL--- 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~--- 106 (429)
.+.+|.++|||++..||+++|+.|++. |.+|++.+|+.++++.....+. .++..+.+|+++.+..++++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~--Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKA--GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 378899999999999999999999997 8999999999998877766543 34778999999876655544
Q ss_pred -----cCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHH--cCCcEEecC----------
Q 014177 107 -----RDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIA--ANIPAITTG---------- 169 (429)
Q Consensus 107 -----~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~--~g~~~i~~~---------- 169 (429)
.+.|++||+||.....+ .+++.-.+.--+.++++-...++..........++ .|+.+++.+
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~--~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~ 160 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTG--SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS 160 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCC--ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC
Confidence 36999999998655321 22322222211222222221122222222222222 333333221
Q ss_pred CCccchhHHHHHHHHHHHHhhcC
Q 014177 170 GIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
+..|+.+|.....+.+.+..++.
T Consensus 161 ~~~Y~~sK~al~~ltr~lA~El~ 183 (270)
T KOG0725|consen 161 GVAYGVSKAALLQLTRSLAKELA 183 (270)
T ss_pred cccchhHHHHHHHHHHHHHHHHh
Confidence 13578899888888887665543
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.3e-08 Score=96.47 Aligned_cols=80 Identities=20% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCC--hHHHH---HHhc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYN--EGSLL---MALR 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d--~~~l~---~~~~ 107 (429)
.++.++||||+|+||+++++.|+++ |++|++++|+.++++++.+++. .++..+.+|+++ .+.++ +.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc
Confidence 3689999999999999999999997 8899999999999888776542 246678899985 23333 3334
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 130 ~~didilVnnAG~~ 143 (320)
T PLN02780 130 GLDVGVLINNVGVS 143 (320)
T ss_pred CCCccEEEEecCcC
Confidence 356999999864
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.6e-08 Score=93.93 Aligned_cols=80 Identities=20% Similarity=0.246 Sum_probs=63.9
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|+++|+||+ +.||.++++.|+++ |++|++.+|+. ++++++.++++ ....+++|++|.++++++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~ 84 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEK 84 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHH
Confidence 677899999996 67999999999997 89999888863 34455555443 35578999999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 85 ~~g~iD~lv~nAG~~ 99 (272)
T PRK08159 85 KWGKLDFVVHAIGFS 99 (272)
T ss_pred hcCCCcEEEECCccc
Confidence 589999999854
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.9e-08 Score=91.68 Aligned_cols=73 Identities=22% Similarity=0.269 Sum_probs=60.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------CccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------DVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------~~Dv 111 (429)
.+++++|+||+|++|+++++.|+++ |++|++.+|+.++. . ..+++++|++|.+++.++++ ++|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~------~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDD------F--PGELFACDLADIEQTAATLAQINEIHPVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCcccc------c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence 4578999999999999999999997 89999999987641 1 23678999999998877765 6899
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
||||+|...
T Consensus 72 vi~~ag~~~ 80 (234)
T PRK07577 72 IVNNVGIAL 80 (234)
T ss_pred EEECCCCCC
Confidence 999998643
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.5e-08 Score=94.29 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=65.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++++++++|+||+|++|+++++.|+++ |++|++.+|+....... ........+++|++|.+++.+.+.++|++|
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~iDilV 84 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINNSES--NDESPNEWIKWECGKEESLDKQLASLDVLI 84 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhhhhh--hccCCCeEEEeeCCCHHHHHHhcCCCCEEE
Confidence 34577899999999999999999999997 89999999986321111 111223578899999999999888999999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
||||..
T Consensus 85 nnAG~~ 90 (245)
T PRK12367 85 LNHGIN 90 (245)
T ss_pred ECCccC
Confidence 999853
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-07 Score=90.32 Aligned_cols=80 Identities=14% Similarity=0.160 Sum_probs=61.8
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++.++|||| ++.||+++++.|+++ |++|++.+|+. +.++++....+ ....+++|++|.++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHH
Confidence 66789999996 568999999999997 88999887653 23333433332 34578999999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 81 ~~g~iD~lVnnAG~~ 95 (261)
T PRK08690 81 HWDGLDGLVHSIGFA 95 (261)
T ss_pred HhCCCcEEEECCccC
Confidence 689999999865
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.4e-08 Score=105.01 Aligned_cols=82 Identities=20% Similarity=0.323 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+++++++|+||+|++|+++++.|+++ |++|++.+|+.++++++.+.+ +.++.++++|++|.+++.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 445 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEA--GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAE 445 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence 467889999999999999999999997 889999999998887776554 2467889999999998888766
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 446 ~g~id~li~~Ag~~ 459 (657)
T PRK07201 446 HGHVDYLVNNAGRS 459 (657)
T ss_pred cCCCCEEEECCCCC
Confidence 689999999853
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.9e-08 Score=92.69 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecC-----------chhHHHHHHHh---CCCcEEEEeeCCChH
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRN-----------REKGAAMVSTL---GKNSEFAEVNIYNEG 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~-----------~~~~~~l~~~l---~~~v~~~~~Dl~d~~ 100 (429)
+++++++|+||+| .||+++++.|+++ |++|++.+|+ .+...++.+++ +.++.++++|++|.+
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 6679999999984 7999999999997 7888887542 12222333332 345778899999999
Q ss_pred HHHHHhc-------CccEEEecCCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~ 119 (429)
++.++++ ++|+|||++|..
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 8887765 479999999854
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.4e-08 Score=92.74 Aligned_cols=76 Identities=17% Similarity=0.250 Sum_probs=64.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+..+.+. .++.++++|++|.++++++++ .
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDGQH------ENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccccc------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467799999999999999999999997 8999999998765421 357789999999998877665 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 78 id~li~~Ag~~ 88 (266)
T PRK06171 78 IDGLVNNAGIN 88 (266)
T ss_pred CCEEEECCccc
Confidence 79999999853
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.4e-08 Score=92.28 Aligned_cols=78 Identities=21% Similarity=0.287 Sum_probs=63.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---C-CcEEEEeeCCChHHHHHHhc-------C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---K-NSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~-~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
|+++|+||+|++|+++++.|+++ |++|++.+|+.++++...+++. . ...++++|++|.+++.++++ +
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 47999999999999999999987 7899999999887776655432 2 24557899999988776654 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 79 id~lv~~ag~~ 89 (272)
T PRK07832 79 MDVVMNIAGIS 89 (272)
T ss_pred CCEEEECCCCC
Confidence 79999999864
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.1e-08 Score=91.95 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCch---hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNRE---KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~---~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|.++||||++ .||+++++.|+++ |++|++.+|+.. .++++.+..+ ....+++|++|.++++++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHHH
Confidence 6678999999986 7999999999987 889999888742 2333333332 23457899999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||++|..
T Consensus 83 ~~g~iDilVnnag~~ 97 (260)
T PRK06603 83 KWGSFDFLLHGMAFA 97 (260)
T ss_pred HcCCccEEEEccccC
Confidence 589999999853
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=8.8e-08 Score=85.25 Aligned_cols=83 Identities=24% Similarity=0.433 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.++++.++|+||++.+|+.+++.|.+. |++|++.+|+.+.++...+++ +.+..++++|++|.+++.++++
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999987 789999999887766554443 3456778999999888777543
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 91 ~G~iDilVnnAG~~~ 105 (169)
T PRK06720 91 FSRIDMLFQNAGLYK 105 (169)
T ss_pred cCCCCEEEECCCcCC
Confidence 6999999998643
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=7e-08 Score=91.52 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=62.4
Q ss_pred CCCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecC-----------chhHHHHHHH---hCCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRN-----------REKGAAMVST---LGKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~-----------~~~~~~l~~~---l~~~v~~~~~Dl~d~ 99 (429)
++++++++|+||+| .+|+++++.|+++ |++|++.+|+ ......+.+. .+.++.++.+|++|.
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 79 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP 79 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 35678999999985 6999999999997 7899999987 1111112222 234688999999999
Q ss_pred HHHHHHhc-------CccEEEecCCCC
Q 014177 100 GSLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 100 ~~l~~~~~-------~~DvVi~~agp~ 119 (429)
+++.++++ ++|+|||++|..
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~ 106 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYS 106 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 88776654 579999999864
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.1e-08 Score=91.06 Aligned_cols=76 Identities=20% Similarity=0.292 Sum_probs=61.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh-HHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE-GSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~-~~l~~~~~~~DvVi~ 114 (429)
++++++++|+||+|+||+++++.|+++ |++|++.+|+.... ...++..+.+|++|. +.+.+.+.++|+|||
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPD------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCcccc------cCCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 367789999999999999999999987 88999999976432 124578899999987 545555568999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++|..
T Consensus 74 ~ag~~ 78 (235)
T PRK06550 74 TAGIL 78 (235)
T ss_pred CCCCC
Confidence 99853
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=9.5e-08 Score=83.75 Aligned_cols=94 Identities=20% Similarity=0.217 Sum_probs=75.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+||+|.+|+.+++...++ |++|++..||+.|...+ ..+.+++.|+.|.+++.+.+.+.|+||++-+..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 68999999999999999999998 89999999999987654 246789999999999999999999999998765
Q ss_pred CCCc-------hHHHHHHHHHcCCcEEE
Q 014177 120 QQAP-------KCTVLEAAIETKTAYID 140 (429)
Q Consensus 120 ~~~~-------~~~v~~aa~~~gv~~vd 140 (429)
.... ...+++....+++.++-
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~Rll 101 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLL 101 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEE
Confidence 3211 11245555555766543
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3e-07 Score=85.56 Aligned_cols=75 Identities=28% Similarity=0.367 Sum_probs=64.3
Q ss_pred EEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc---CccEEEecCC
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR---DVDLVVHAAG 117 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi~~ag 117 (429)
+|+||+|++|+++++.|+++ |++|++.+|+.++++.+...+ ..++.++.+|++|.+++.++++ ++|++||++|
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 59999999999999999997 899999999988777766554 2457889999999999988876 4799999998
Q ss_pred CC
Q 014177 118 PF 119 (429)
Q Consensus 118 p~ 119 (429)
..
T Consensus 79 ~~ 80 (230)
T PRK07041 79 DT 80 (230)
T ss_pred CC
Confidence 54
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.5e-08 Score=89.59 Aligned_cols=76 Identities=17% Similarity=0.401 Sum_probs=58.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh---cCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL---RDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~---~~~DvVi~~a 116 (429)
|+|+|+||+|+||+++++.|++++.++.+++..|+.... . ...++.++++|++|.++++++. +++|+||||+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~---~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~a 75 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F---QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCV 75 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c---ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence 589999999999999999999975556776666654321 1 1246788999999998876654 4789999999
Q ss_pred CCCC
Q 014177 117 GPFQ 120 (429)
Q Consensus 117 gp~~ 120 (429)
|...
T Consensus 76 G~~~ 79 (235)
T PRK09009 76 GMLH 79 (235)
T ss_pred cccc
Confidence 8653
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.5e-08 Score=86.18 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=92.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--------C
Q 014177 38 RNARVLVLGG-TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------D 108 (429)
Q Consensus 38 ~~~~VlV~Ga-~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------~ 108 (429)
..+.|+|+|+ .|.||.++++.+.+. |+.|+...|+.+...++..+. ++...++|+++++++.+... +
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~--G~~V~AtaR~~e~M~~L~~~~--gl~~~kLDV~~~~~V~~v~~evr~~~~Gk 81 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARN--GYLVYATARRLEPMAQLAIQF--GLKPYKLDVSKPEEVVTVSGEVRANPDGK 81 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhC--CeEEEEEccccchHhhHHHhh--CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence 3578999985 588999999999997 899999999999988887554 47889999999998877654 5
Q ss_pred ccEEEecCCCCCCC----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC---------CCccch
Q 014177 109 VDLVVHAAGPFQQA----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG---------GIYPGV 175 (429)
Q Consensus 109 ~DvVi~~agp~~~~----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~---------g~~pG~ 175 (429)
.|+++|+||..... .+...++.|.+. .+.+......... +...+++|..+..|+ +..|..
T Consensus 82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~v-----NvfG~irM~~a~~--h~likaKGtIVnvgSl~~~vpfpf~~iYsA 154 (289)
T KOG1209|consen 82 LDLLYNNAGQSCTFPALDATIAAVEQCFKV-----NVFGHIRMCRALS--HFLIKAKGTIVNVGSLAGVVPFPFGSIYSA 154 (289)
T ss_pred eEEEEcCCCCCcccccccCCHHHHHhhhcc-----ceeeeehHHHHHH--HHHHHccceEEEecceeEEeccchhhhhhH
Confidence 89999999865431 112334444332 2222222222221 445667776655543 223566
Q ss_pred hHHHHHHHHHHH
Q 014177 176 SNVMAAELVRVA 187 (429)
Q Consensus 176 s~~~a~~~~~~~ 187 (429)
||.....+++.+
T Consensus 155 sKAAihay~~tL 166 (289)
T KOG1209|consen 155 SKAAIHAYARTL 166 (289)
T ss_pred HHHHHHHhhhhc
Confidence 776655555443
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-07 Score=88.94 Aligned_cols=79 Identities=18% Similarity=0.217 Sum_probs=62.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++|+||+|++|+++++.|.++ |++|++.+|+.. ..+.+...+ +.++.++.+|+.|.+++.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999987 789999999853 233332222 2357889999999988877664
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 80 ~id~vi~~ag~~ 91 (245)
T PRK12824 80 PVDILVNNAGIT 91 (245)
T ss_pred CCCEEEECCCCC
Confidence 589999999753
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.7e-07 Score=87.72 Aligned_cols=78 Identities=24% Similarity=0.319 Sum_probs=62.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
|.++|+||+|++|+++++.|+++ |+++++..| +.++.+....+. +.++.++.+|++|.+++.++++ +
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999987 789988887 555555443332 2467899999999988776654 5
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||++|..
T Consensus 79 id~vi~~ag~~ 89 (242)
T TIGR01829 79 IDVLVNNAGIT 89 (242)
T ss_pred CcEEEECCCCC
Confidence 89999999854
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2e-07 Score=88.81 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=62.5
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEec---CchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSR---NREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R---~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++++++|+|| ++.||+++++.|++. |++|++.+| +.++++.+.++++ ....+++|++|.++++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHH
Confidence 56789999996 568999999999997 889988764 3455555555443 23468899999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 81 ~~g~iD~lvnnAG~~ 95 (260)
T PRK06997 81 HWDGLDGLVHSIGFA 95 (260)
T ss_pred HhCCCcEEEEccccC
Confidence 589999999864
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.3e-07 Score=92.91 Aligned_cols=82 Identities=22% Similarity=0.230 Sum_probs=65.5
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+..+++++++|+||+|.||+.+++.|.++ |++|++.+|+. +.++++.++++ ...+++|++|.++++++++
T Consensus 205 ~~~~~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 205 DRPLAGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVG--GTALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred ccCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999987 89999998843 44455555443 4678999999988877665
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||++|..
T Consensus 281 ~~g~id~vi~~AG~~ 295 (450)
T PRK08261 281 RHGGLDIVVHNAGIT 295 (450)
T ss_pred hCCCCCEEEECCCcC
Confidence 589999999864
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.7e-07 Score=87.21 Aligned_cols=82 Identities=21% Similarity=0.294 Sum_probs=71.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+..+.++|||++..||..+++.|+.+ |.+|++++|+.++.++..+++. .++.++++|++|.++++++.+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 56689999999999999999999998 7999999999988887776654 346779999999999988765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
..|++||+||.+.
T Consensus 111 ~~~~ldvLInNAGV~~ 126 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMA 126 (314)
T ss_pred cCCCccEEEeCccccc
Confidence 6899999999664
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.9e-07 Score=84.01 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=63.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHc--CCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcC-----
Q 014177 41 RVLVLGGTGRVGGSTAVALSKL--CPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRD----- 108 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~--~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~----- 108 (429)
.++|+||++.||.++++.|+++ ..|++|++.+|+.++++++.+++. .++.++++|++|.++++++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 5899999999999999999872 127899999999988887766543 2477899999999988776641
Q ss_pred ------ccEEEecCCCC
Q 014177 109 ------VDLVVHAAGPF 119 (429)
Q Consensus 109 ------~DvVi~~agp~ 119 (429)
.|+|||+||..
T Consensus 82 g~~~~~~~~lv~nAG~~ 98 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTL 98 (256)
T ss_pred ccCCCceEEEEeCCccc
Confidence 26999999854
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.6e-07 Score=107.95 Aligned_cols=171 Identities=19% Similarity=0.186 Sum_probs=109.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCchhHH---HHHHHh----------CCCcEEEEeeCCC-----
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNREKGA---AMVSTL----------GKNSEFAEVNIYN----- 98 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~~~~---~l~~~l----------~~~v~~~~~Dl~d----- 98 (429)
.++|+|||++||+|+++++.|++++ ..++|++..|+..... .+.... ..++.++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5789999999999999999999863 2478888888754322 222111 1368889999974
Q ss_pred -hHHHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCCcE-EEeCCChhHHHH-HHhhHHHHHH---
Q 014177 99 -EGSLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKTAY-IDVCDDTIYSQR-AKSFKDRAIA--- 160 (429)
Q Consensus 99 -~~~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~-~~~~~~~a~~--- 160 (429)
.+...++.+++|+|||+|+.... .++.++++.|.+.+++. +.+|+...+... .....+....
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence 35566677799999999986432 24678899998887654 555554333110 0000000000
Q ss_pred cCCc-------EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 161 ANIP-------AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 161 ~g~~-------~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
.+++ ...+....|+.||++++.++..+.+ .+.++..+|. ..++|+...|
T Consensus 1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rp-g~v~G~~~~g 1186 (1389)
T TIGR03443 1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRP-GYVTGDSKTG 1186 (1389)
T ss_pred CCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECC-CccccCCCcC
Confidence 0110 0111234599999999999988764 4677888887 4567876544
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.9e-07 Score=81.34 Aligned_cols=84 Identities=18% Similarity=0.258 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.++.+.++|+||+..||++++..|.+. |++|.+++++...+++.+..+++ +-....+|+++.++++..++
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence 456788999999999999999999997 89999999999998988888874 56778999999887666444
Q ss_pred -CccEEEecCCCCCC
Q 014177 108 -DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 -~~DvVi~~agp~~~ 121 (429)
.+++++||||...+
T Consensus 89 g~psvlVncAGItrD 103 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRD 103 (256)
T ss_pred CCCcEEEEcCccccc
Confidence 68999999997653
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.4e-07 Score=84.88 Aligned_cols=76 Identities=25% Similarity=0.302 Sum_probs=60.7
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+|+||+|++|.++++.|+++ |++|++.+|+ .++++.+.+.+ +.++.++++|++|.+++.++++ +.|
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999997 8899888765 44555554443 3468899999999998877665 479
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
.+||++|..
T Consensus 79 ~li~~ag~~ 87 (239)
T TIGR01831 79 GVVLNAGIT 87 (239)
T ss_pred EEEECCCCC
Confidence 999999854
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=8.2e-07 Score=84.49 Aligned_cols=155 Identities=13% Similarity=0.040 Sum_probs=107.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR-------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~-------- 107 (429)
...|-|+|||+-...|..+|+.|.++ |+.|.+...+++.++.+..+. .++...+++|++++++++++.+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~--Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKK--GFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhc--CCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 45678999999999999999999998 899999999888888888777 5788999999999999998875
Q ss_pred -CccEEEecCCCCCCCc-----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC---------CCc
Q 014177 108 -DVDLVVHAAGPFQQAP-----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG---------GIY 172 (429)
Q Consensus 108 -~~DvVi~~agp~~~~~-----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~---------g~~ 172 (429)
+.--||||||.+...| +.+-.+.+++. + +-+.........++-.+ +.|..+.+++ +..
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~v--N---llG~irvT~~~lpLlr~--arGRvVnvsS~~GR~~~p~~g~ 177 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNV--N---LLGTIRVTKAFLPLLRR--ARGRVVNVSSVLGRVALPALGP 177 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhh--h---hhhHHHHHHHHHHHHHh--ccCeEEEecccccCccCccccc
Confidence 4567999998554322 12334444332 2 22233333333344333 4565554442 233
Q ss_pred cchhHHHHHHHHHHHHhh---cCCCCeEEEE
Q 014177 173 PGVSNVMAAELVRVARNE---SKGEPERLRF 200 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~---~~~~v~~i~~ 200 (429)
|..||...+..++.+++| ++.++..+..
T Consensus 178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiieP 208 (322)
T KOG1610|consen 178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEP 208 (322)
T ss_pred chhhHHHHHHHHHHHHHHHHhcCcEEEEecc
Confidence 888999999888887764 4444444443
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.8e-07 Score=84.44 Aligned_cols=151 Identities=17% Similarity=0.146 Sum_probs=106.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+++|+|+|++|.+|++|.+-+.++++ +-+.+..+. -.+|+++..+.+++++ ++-.|||+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------kd~DLt~~a~t~~lF~~ekPthVIhl 62 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------KDADLTNLADTRALFESEKPTHVIHL 62 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------ccccccchHHHHHHHhccCCceeeeh
Confidence 47999999999999999999998743 224444322 2468888888888887 78999999
Q ss_pred CC----CCCC------------CchHHHHHHHHHcCCcEEEeCCChhHHHH--HHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 116 AG----PFQQ------------APKCTVLEAAIETKTAYIDVCDDTIYSQR--AKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 116 ag----p~~~------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~--~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
|+ .+.+ .-+.+++..|-+.|++.+-.+.+...+.. ..+++|.+.-.|.+-- +.+.|...|
T Consensus 63 AAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphp--sN~gYsyAK 140 (315)
T KOG1431|consen 63 AAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHP--SNFGYSYAK 140 (315)
T ss_pred HhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCC--CchHHHHHH
Confidence 84 2322 11368999999999987655555544432 2366776655554421 234477788
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
-++.-..+.|+++++-...++-. .+.+||.+.
T Consensus 141 r~idv~n~aY~~qhg~~~tsviP-tNvfGphDN 172 (315)
T KOG1431|consen 141 RMIDVQNQAYRQQHGRDYTSVIP-TNVFGPHDN 172 (315)
T ss_pred HHHHHHHHHHHHHhCCceeeecc-ccccCCCCC
Confidence 88887778899888888777766 578898753
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.57 E-value=7.6e-07 Score=78.38 Aligned_cols=78 Identities=26% Similarity=0.365 Sum_probs=58.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHH---H---HhCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMV---S---TLGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~---~---~l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+||+|++|.++++.|.++ +. .|++.+|+.+..+... + ..+.++.++.+|+++.+++.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47999999999999999999986 54 6888888765433211 1 122456788999999888877655
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
.+|.|||+++..
T Consensus 79 ~~~id~li~~ag~~ 92 (180)
T smart00822 79 LGPLRGVIHAAGVL 92 (180)
T ss_pred cCCeeEEEEccccC
Confidence 369999999854
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.7e-07 Score=87.53 Aligned_cols=157 Identities=13% Similarity=0.027 Sum_probs=109.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HH--HHHH---HhCCCcEEEEeeCCChHHHHHHhc--C
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GA--AMVS---TLGKNSEFAEVNIYNEGSLLMALR--D 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~--~l~~---~l~~~v~~~~~Dl~d~~~l~~~~~--~ 108 (429)
++|+.||+|-+|+-|+.+++.|++. |++|....|+... .. .+.+ .-+.++.++.+|++|...+.++++ +
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~ 78 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ 78 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC
Confidence 4689999999999999999999998 8999988876332 11 1111 111347889999999999998887 7
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcC---CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETK---TAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG 170 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~g---v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g 170 (429)
+|-|+|++++++. .|+.+++|+....| +++...|++. .+..... .......+.-|-
T Consensus 79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE-~fG~v~~---~pq~E~TPFyPr-- 152 (345)
T COG1089 79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE-LYGLVQE---IPQKETTPFYPR-- 152 (345)
T ss_pred chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH-hhcCccc---CccccCCCCCCC--
Confidence 9999999987642 36799999988765 3444444443 3332221 111223455443
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEee
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYY 203 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~ 203 (429)
+.|+++|+.+.|+...|++.|+.-.+.=.+ ||
T Consensus 153 SPYAvAKlYa~W~tvNYResYgl~AcnGIL-FN 184 (345)
T COG1089 153 SPYAVAKLYAYWITVNYRESYGLFACNGIL-FN 184 (345)
T ss_pred CHHHHHHHHHHheeeehHhhcCceeeccee-ec
Confidence 449999999999999998887766544443 55
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.4e-07 Score=89.20 Aligned_cols=86 Identities=22% Similarity=0.219 Sum_probs=62.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
||||||+||||+++++.|+++ +++|++.+|+..+...... .. ..|+.+ +.+.+.++++|+|||||+....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-----~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGANTKW-----EG--YKPWAP-LAESEALEGADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCcccc-----ee--eecccc-cchhhhcCCCCEEEECCCCCcc
Confidence 689999999999999999997 7999999998876432210 11 112222 3455667899999999975321
Q ss_pred -----------------CchHHHHHHHHHcCCc
Q 014177 122 -----------------APKCTVLEAAIETKTA 137 (429)
Q Consensus 122 -----------------~~~~~v~~aa~~~gv~ 137 (429)
.++.+++++|.+.+++
T Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 103 (292)
T TIGR01777 71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQK 103 (292)
T ss_pred cccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC
Confidence 1357888999999873
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.7e-07 Score=85.11 Aligned_cols=76 Identities=21% Similarity=0.351 Sum_probs=60.5
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
++|+|++|++|+.+++.|+++ |++|++.+|+. ++++.+.+.+ +.++.++.+|++|.+++++++. .+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999997 78999998875 4444443332 2357789999999998877765 469
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
.|||++|..
T Consensus 79 ~vi~~ag~~ 87 (239)
T TIGR01830 79 ILVNNAGIT 87 (239)
T ss_pred EEEECCCCC
Confidence 999999864
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.1e-07 Score=86.89 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=78.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+|+|+||||. |+.+++.|.+. +++|++..++....+.+.. .....+..+..|.+++.++++ ++|+||+++.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~--g~~v~~s~~t~~~~~~~~~---~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ--GIEILVTVTTSEGKHLYPI---HQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC--CCeEEEEEccCCccccccc---cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 58999999998 99999999987 7899998888765544432 123456677888888988887 6999999999
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
||...-+.++.++|.+.|++|+-+-
T Consensus 75 PfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 75 PFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 9875445789999999999999663
|
This enzyme was found to be a monomer by gel filtration. |
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.5e-07 Score=89.41 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=63.3
Q ss_pred EEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------CccE
Q 014177 43 LVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------DVDL 111 (429)
Q Consensus 43 lV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~~Dv 111 (429)
+||||++.||.++++.|+++ | ++|++.+|+.++++.+.+.+. .++.++++|++|.++++++++ ++|+
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 59999999999999999997 7 899999999888877766653 356788999999998877664 5899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
+||+||..
T Consensus 79 lInnAG~~ 86 (308)
T PLN00015 79 LVCNAAVY 86 (308)
T ss_pred EEECCCcC
Confidence 99999853
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.4e-07 Score=81.70 Aligned_cols=84 Identities=24% Similarity=0.383 Sum_probs=69.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH---hC-CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST---LG-KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~---l~-~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++.+|+++++|+.|.||.+.++.|+++ +..+.+++-+.++.+..++. .+ .++-++++|+++..++++.++
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~k--gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEK--GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHc--CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 467899999999999999999999998 78888887777776655432 22 357899999999988888776
Q ss_pred ---CccEEEecCCCCCC
Q 014177 108 ---DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 ---~~DvVi~~agp~~~ 121 (429)
.+|++||.||...+
T Consensus 80 ~fg~iDIlINgAGi~~d 96 (261)
T KOG4169|consen 80 TFGTIDILINGAGILDD 96 (261)
T ss_pred HhCceEEEEcccccccc
Confidence 58999999998764
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.5e-06 Score=82.85 Aligned_cols=73 Identities=29% Similarity=0.365 Sum_probs=67.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++|+|+||||++|+++++.|+++ +++|.++.|+++++..+. ..+++...|+.+.+++...+++.|.++++.+.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~ 73 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGL 73 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence 57999999999999999999998 899999999999887765 46899999999999999999999999999874
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.7e-07 Score=85.85 Aligned_cols=138 Identities=10% Similarity=0.098 Sum_probs=93.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCc---hhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhcCc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNR---EKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~---~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
+++++++|+|+ |.+|++++..|.+. |++ |++++|+. ++++++.+++. ..+....+|+.+.+++.+.++.+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~--G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~ 200 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALD--GAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASS 200 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccC
Confidence 35689999998 67999999999987 664 99999997 67777776653 23456678998888888888899
Q ss_pred cEEEecCCCCC--CCchHHH-HHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 110 DLVVHAAGPFQ--QAPKCTV-LEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 110 DvVi~~agp~~--~~~~~~v-~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
|+||||...-. .....++ -...+..+...+|+...+. ..++-..+++.|..++.| -.++..+.+..
T Consensus 201 DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~----~T~ll~~A~~~G~~~~~G-------~~ML~~Qa~~~ 269 (289)
T PRK12548 201 DILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNPK----KTKLLEDAEAAGCKTVGG-------LGMLLWQGAEA 269 (289)
T ss_pred CEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCCC----CCHHHHHHHHCCCeeeCc-------HHHHHHHHHHH
Confidence 99999984321 1111122 1223444555678775542 235566788888776544 24566677665
Q ss_pred HH
Q 014177 187 AR 188 (429)
Q Consensus 187 ~~ 188 (429)
+.
T Consensus 270 f~ 271 (289)
T PRK12548 270 YK 271 (289)
T ss_pred HH
Confidence 43
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.6e-07 Score=87.67 Aligned_cols=81 Identities=16% Similarity=0.187 Sum_probs=59.2
Q ss_pred CCCCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------------C----CcEEEEeeC
Q 014177 35 MKNRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------------K----NSEFAEVNI 96 (429)
Q Consensus 35 ~~~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------------~----~v~~~~~Dl 96 (429)
.++++|.+||||| +..||.++++.|++. |++|++ +|+.++++++...+. + ....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 81 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA 81 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence 3488999999999 677999999999997 899988 788777766653331 0 135677888
Q ss_pred --CChH------------------HHHHHhc-------CccEEEecCCC
Q 014177 97 --YNEG------------------SLLMALR-------DVDLVVHAAGP 118 (429)
Q Consensus 97 --~d~~------------------~l~~~~~-------~~DvVi~~agp 118 (429)
++.+ +++++++ ++|++|||||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~ 130 (303)
T PLN02730 82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLAN 130 (303)
T ss_pred ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 3222 4555443 58999999963
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-07 Score=87.38 Aligned_cols=129 Identities=20% Similarity=0.269 Sum_probs=83.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.|+|++|.+|+.+++.+.+. ++++++. ++++.++.... ...++...++++++++++|+||.++.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~~~~~~~----------~~~~i~~~~dl~~ll~~~DvVid~t~ 69 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPGSPLVGQ----------GALGVAITDDLEAVLADADVLIDFTT 69 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCcccccc----------CCCCccccCCHHHhccCCCEEEECCC
Confidence 368999998899999999988774 5777765 56766544322 11233333456667778999999997
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhHH-HHHHhhHHHHHHcCCcEEecCCCccc--hhHHHHHHHHH
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYS-QRAKSFKDRAIAANIPAITTGGIYPG--VSNVMAAELVR 185 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~-~~~~~~~~~a~~~g~~~i~~~g~~pG--~s~~~a~~~~~ 185 (429)
|... ..+++.|+++|++.+.-+ ..+. .....+.+ +. ++++++....++.| +...++..++.
T Consensus 70 p~~~---~~~~~~al~~G~~vvigt--tG~s~~~~~~l~~-aa-~~~~v~~s~n~s~g~~~~~~l~~~aa~ 133 (257)
T PRK00048 70 PEAT---LENLEFALEHGKPLVIGT--TGFTEEQLAELEE-AA-KKIPVVIAPNFSIGVNLLMKLAEKAAK 133 (257)
T ss_pred HHHH---HHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHH-Hh-cCCCEEEECcchHHHHHHHHHHHHHHH
Confidence 6543 688999999999998432 2222 23334444 22 55666666556544 34444555554
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.1e-07 Score=81.29 Aligned_cols=107 Identities=22% Similarity=0.251 Sum_probs=78.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++++++|+||+|.+|+.+++.|.+. +.+|++.+|+.++++.+.+.+. .......+|..+.+++.+.++++|+||
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLARE--GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 467789999999999999999999986 6899999999999888877653 134566788889888889999999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTI 146 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~ 146 (429)
++.. ..... ....+.+.+.+.-.+|++....
T Consensus 103 ~at~-~g~~~-~~~~~~~~~~~~vv~D~~~~~~ 133 (194)
T cd01078 103 AAGA-AGVEL-LEKLAWAPKPLAVAADVNAVPP 133 (194)
T ss_pred ECCC-CCcee-chhhhcccCceeEEEEccCCCC
Confidence 9763 22210 1222222223445677765543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.4e-07 Score=81.17 Aligned_cols=63 Identities=30% Similarity=0.500 Sum_probs=54.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi~~a 116 (429)
|+++|+||+|.+|+++++.|.++ ++|++.+|+.+ .+++|++|.++++++++ ++|+|||++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a 63 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG--------------DVQVDITDPASIRALFEKVGKVDAVVSAA 63 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC--------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999885 68999888753 36899999998888776 789999999
Q ss_pred CCC
Q 014177 117 GPF 119 (429)
Q Consensus 117 gp~ 119 (429)
|..
T Consensus 64 g~~ 66 (199)
T PRK07578 64 GKV 66 (199)
T ss_pred CCC
Confidence 853
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.7e-06 Score=86.67 Aligned_cols=101 Identities=22% Similarity=0.319 Sum_probs=67.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH-HhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM-ALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~-~~~~~DvVi~~ 115 (429)
.++++|.|+||+|++|+.+++.|.++ |..+|+...++....+.+....+ .....|+.+.++++. .++++|+||.+
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~h-P~~el~~l~s~~saG~~i~~~~~---~l~~~~~~~~~~~~~~~~~~~DvVf~A 111 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANH-PDFEITVMTADRKAGQSFGSVFP---HLITQDLPNLVAVKDADFSDVDAVFCC 111 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhC-CCCeEEEEEChhhcCCCchhhCc---cccCccccceecCCHHHhcCCCEEEEc
Confidence 36679999999999999999999885 88999998876554433322221 112223332222222 24789999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++.-. ..+++.+. +.|+..||++++.
T Consensus 112 lp~~~---s~~i~~~~-~~g~~VIDlSs~f 137 (381)
T PLN02968 112 LPHGT---TQEIIKAL-PKDLKIVDLSADF 137 (381)
T ss_pred CCHHH---HHHHHHHH-hCCCEEEEcCchh
Confidence 75321 25666664 6889999999764
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-06 Score=78.31 Aligned_cols=84 Identities=15% Similarity=0.261 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
|.++.++|+||.-.||-.++++|++. ++.+++++. |+++++....+. .+.++.++++|+++.+++.++.+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 44677999999999999999999984 677777765 568884333222 24689999999999998888764
Q ss_pred ----CccEEEecCCCCCC
Q 014177 108 ----DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 ----~~DvVi~~agp~~~ 121 (429)
+.|++||+||.+..
T Consensus 80 Vg~~GlnlLinNaGi~~~ 97 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALS 97 (249)
T ss_pred cccCCceEEEeccceeee
Confidence 68999999997654
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.6e-06 Score=73.22 Aligned_cols=84 Identities=20% Similarity=0.175 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
++.++.|+++|+.-.||+.++..|.+. |.+|+.+.|+++.+..+.++.+..++.+++|+.+.+.+.+.+. ..|.+
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~a--GA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKA--GAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhc--CCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 467889999998888999999999997 8999999999999999999888778999999999999988876 57999
Q ss_pred EecCCCCCC
Q 014177 113 VHAAGPFQQ 121 (429)
Q Consensus 113 i~~agp~~~ 121 (429)
+|+||....
T Consensus 82 VNNAgvA~~ 90 (245)
T KOG1207|consen 82 VNNAGVATN 90 (245)
T ss_pred hccchhhhc
Confidence 999987654
|
|
| >TIGR01921 DAP-DH diaminopimelate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.2e-06 Score=82.15 Aligned_cols=123 Identities=20% Similarity=0.263 Sum_probs=84.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCc-hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNR-EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~-~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.||.|+| +|.+|+.+++.+.+ .++.+++. .+|+. +++. .. +... ...| ..+++.++|+|+.|
T Consensus 2 ~kIRVgIVG-~GnIGr~~a~al~~-~pd~ELVgV~dr~~~~~~~---~~----~~v~--~~~d---~~e~l~~iDVViIc 67 (324)
T TIGR01921 2 SKIRAAIVG-YGNLGRSVEKAIQQ-QPDMELVGVFSRRGAETLD---TE----TPVY--AVAD---DEKHLDDVDVLILC 67 (324)
T ss_pred CCcEEEEEe-ecHHHHHHHHHHHh-CCCcEEEEEEcCCcHHHHh---hc----CCcc--ccCC---HHHhccCCCEEEEc
Confidence 457999999 79999999999887 47888876 47764 3221 11 1111 1223 33345789999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
.+.... .+.+..++++|.|.||...... .-.....++..+++.|...++++||+||.-.
T Consensus 68 tPs~th---~~~~~~~L~aG~NVV~s~~~h~~~p~~~~~ld~AAk~~g~vsvi~~GwDPG~~s 127 (324)
T TIGR01921 68 MGSATD---IPEQAPYFAQFANTVDSFDNHRDIPRHRQVMDAAAKAAGNVSVISTGWDPGMFS 127 (324)
T ss_pred CCCccC---HHHHHHHHHcCCCEEECCCcccCCHHHHHHHHHHHHHcCCEEEEECCCCcChHH
Confidence 755443 6888889999999998753211 1123446777777777788888999999855
|
This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized. |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.1e-06 Score=79.22 Aligned_cols=78 Identities=27% Similarity=0.431 Sum_probs=53.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch---hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE---KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~---~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.++|+||.|.+|..+++.|++++ ..+|++.+|+.. ..++..+++ +.++.++++|++|.+++.++++
T Consensus 2 tylitGG~gglg~~la~~La~~~-~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG-ARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcC-CCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 58999999999999999999974 568999999821 222222222 3568899999999999998875
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
.++.|||++|..
T Consensus 81 ~i~gVih~ag~~ 92 (181)
T PF08659_consen 81 PIDGVIHAAGVL 92 (181)
T ss_dssp -EEEEEE-----
T ss_pred Ccceeeeeeeee
Confidence 468899999864
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1e-06 Score=82.36 Aligned_cols=66 Identities=29% Similarity=0.356 Sum_probs=49.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEEEecCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLVVHAAGPF 119 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~~agp~ 119 (429)
|+|+||||+||++++..|.+. |++|++..|++.+.+.... ..+. ..+.+.+... ++|+|||+||..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~~---~~v~-------~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNLH---PNVT-------LWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhcC---cccc-------ccchhhhcccCCCCEEEECCCCc
Confidence 689999999999999999987 8999999999887653221 1111 1233444555 799999999853
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.1e-06 Score=72.00 Aligned_cols=96 Identities=25% Similarity=0.336 Sum_probs=65.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC--CCc-EEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG--KNS-EFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~--~~v-~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
||.|+||+|++|+.+++.|.+ +|.++++.+ +++.+..+.+....+ ... +...-| .+.+. +.++|+||.|.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPEE----LSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGHH----HTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCeeehhccccccccceeEee-cchhH----hhcCCEEEecC
Confidence 689999999999999999999 688886654 444424344433322 112 222223 34332 37999999997
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.... ..+...+++.|++.||.+++.
T Consensus 75 ~~~~~---~~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 75 PHGAS---KELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp CHHHH---HHHHHHHHHTTSEEEESSSTT
T ss_pred chhHH---HHHHHHHhhCCcEEEeCCHHH
Confidence 64322 677888899999999999765
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=1e-06 Score=84.08 Aligned_cols=78 Identities=22% Similarity=0.382 Sum_probs=59.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHhC----CCcEEEEeeCCChHHH----HHHh----
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTLG----KNSEFAEVNIYNEGSL----LMAL---- 106 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l----~~~~---- 106 (429)
+.++|+||+|+||+++++.|+++ |++|++.+| +.++++.+.+.+. .++..+.+|++|.+++ ++++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 47999999999999999999997 889988765 4566666655542 3456789999998754 3332
Q ss_pred ---cCccEEEecCCCC
Q 014177 107 ---RDVDLVVHAAGPF 119 (429)
Q Consensus 107 ---~~~DvVi~~agp~ 119 (429)
.++|+||||||..
T Consensus 80 ~~~g~iD~lv~nAG~~ 95 (267)
T TIGR02685 80 RAFGRCDVLVNNASAF 95 (267)
T ss_pred HccCCceEEEECCccC
Confidence 3689999999854
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.9e-06 Score=75.31 Aligned_cols=121 Identities=20% Similarity=0.250 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+++++++|+|+ |.+|+.+++.|.+.+ ..+|++.+|+.++.+++.+.+... .+..+..+. .+.++++|+||+|+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~Dvvi~~~ 89 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGEL--GIAIAYLDL---EELLAEADLIINTT 89 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhc--ccceeecch---hhccccCCEEEeCc
Confidence 45689999996 889999999999863 368999999999888877665421 122344443 34478999999999
Q ss_pred CCCCC-CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 117 GPFQQ-APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 117 gp~~~-~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
++... .....+...+++.+...+|+++..... .+.+.+++.|..++.|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~----~l~~~~~~~g~~~v~g 138 (155)
T cd01065 90 PVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET----PLLKEARALGAKTIDG 138 (155)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC----HHHHHHHHCCCceeCC
Confidence 76442 111223345567888889998654321 5566677778765443
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1e-05 Score=77.59 Aligned_cols=141 Identities=21% Similarity=0.266 Sum_probs=96.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|++++|.|+| +|.+|+.+++.|.+..++++++ +.+|++++.+++.+.++. ... ..+ +++++.++|+|+-|
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~-~~~----~~~---~eell~~~D~Vvi~ 74 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRR-PPP----VVP---LDQLATHADIVVEA 74 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCC-Ccc----cCC---HHHHhcCCCEEEEC
Confidence 6678999999 7999999999998732577776 678898888777665431 011 123 44456789999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEP 195 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v 195 (429)
+++... ..+.+.++++|.+.+..+... . .....+.+.++++|..+.+.+|+.-|.. ..+. -...++
T Consensus 75 tp~~~h---~e~~~~aL~aGk~Vi~~s~ga-l-~~~~~L~~~A~~~g~~l~v~sGa~~g~d------~l~~---g~iG~~ 140 (271)
T PRK13302 75 APASVL---RAIVEPVLAAGKKAIVLSVGA-L-LRNEDLIDLARQNGGQIIVPTGALLGLD------AVTA---AAEGTI 140 (271)
T ss_pred CCcHHH---HHHHHHHHHcCCcEEEecchh-H-HhHHHHHHHHHHcCCEEEEcchHHHhHH------HHHH---HHcCCc
Confidence 875433 577889999999998764221 1 2334667778889999888766665542 2221 123567
Q ss_pred eEEEE
Q 014177 196 ERLRF 200 (429)
Q Consensus 196 ~~i~~ 200 (429)
+.+++
T Consensus 141 ~~v~~ 145 (271)
T PRK13302 141 HSVKM 145 (271)
T ss_pred eEEEE
Confidence 77776
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.3e-06 Score=81.67 Aligned_cols=140 Identities=17% Similarity=0.253 Sum_probs=89.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEE--EEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEF--AEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~--~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+|+||.|+||+|+.|..+.+.|.. +|..++.++..+..+.+.+.+.++.-... .....-|.+.+ ..++||+||.|
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~-Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFla 77 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAG-HPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLA 77 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhc-CCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEe
Confidence 468999999999999999999998 58999877765554444454444311111 22222233333 34579999988
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhH-----HHHH------------------HhhH-HHHHHcCCcEEecCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIY-----SQRA------------------KSFK-DRAIAANIPAITTGGI 171 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~-----~~~~------------------~~~~-~~a~~~g~~~i~~~g~ 171 (429)
.. ... ...++....+.|++.||+|++.-+ |+.. .+++ ++. ++...|-..|+
T Consensus 78 lP-hg~--s~~~v~~l~~~g~~VIDLSadfR~~d~~~ye~~Yg~~h~~~~~l~~avYGLpEl~~e~i--~~A~lIAnPGC 152 (349)
T COG0002 78 LP-HGV--SAELVPELLEAGCKVIDLSADFRLKDPEVYEKWYGFTHAGPELLEDAVYGLPELHREKI--RGAKLIANPGC 152 (349)
T ss_pred cC-chh--HHHHHHHHHhCCCeEEECCcccccCCHHHHHHhhCCCCCCchhhhcccccCcccCHHHH--hcCCEeeCCCc
Confidence 64 322 257777888889999999987422 1111 0121 222 34556667778
Q ss_pred ccchhHHHHHHHHH
Q 014177 172 YPGVSNVMAAELVR 185 (429)
Q Consensus 172 ~pG~s~~~a~~~~~ 185 (429)
.|-.+-+...-+.+
T Consensus 153 ypTa~iLal~PL~~ 166 (349)
T COG0002 153 YPTAAILALAPLVK 166 (349)
T ss_pred hHHHHHHHHHHHHH
Confidence 88878777777775
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=4.9e-06 Score=78.41 Aligned_cols=83 Identities=22% Similarity=0.338 Sum_probs=64.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHhC----CCcEEEEeeCCC-hHHHHHHhc-
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTLG----KNSEFAEVNIYN-EGSLLMALR- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l~----~~v~~~~~Dl~d-~~~l~~~~~- 107 (429)
.+.++.++||||++.+|..+++.|+++ |+.++++.|+.+. .+.+.+... ..+....+|+++ .++++.+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~ 79 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALARE--GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAA 79 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHH
Confidence 367899999999999999999999976 8898888777553 444444333 356778899998 777766654
Q ss_pred ------CccEEEecCCCCC
Q 014177 108 ------DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ------~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 80 ~~~~~g~id~lvnnAg~~~ 98 (251)
T COG1028 80 AEEEFGRIDILVNNAGIAG 98 (251)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 4899999998653
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.29 E-value=8e-06 Score=80.02 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=64.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
.||+|+|++|.||+.++..|..++-..++++.|+++...+ +-++. ........++.+.+++.+.++++|+||++||.
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~--a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~ 96 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV--AADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV 96 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCee--EchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence 6999999999999999999987533448999998772221 11111 11122344554445577889999999999985
Q ss_pred CCCCc-------------hHHHHHHHHHcCCcEE
Q 014177 119 FQQAP-------------KCTVLEAAIETKTAYI 139 (429)
Q Consensus 119 ~~~~~-------------~~~v~~aa~~~gv~~v 139 (429)
....+ ..++++...+++.+.+
T Consensus 97 ~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~ai 130 (323)
T PLN00106 97 PRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNAL 130 (323)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 43211 2445566666665543
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.2e-06 Score=85.08 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=67.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEE-EEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEF-AEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~-~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+|++|.|+||+|++|+.+++.|.+ +++++++.+.++.+..+.+.+..+ .+.. ...++.+.+.. ..+++|+|+-|+
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~-~p~~elv~v~~~~~~g~~l~~~~~-~~~~~~~~~~~~~~~~--~~~~vD~Vf~al 76 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLN-HPEVEIVAVTSRSSAGKPLSDVHP-HLRGLVDLVLEPLDPE--ILAGADVVFLAL 76 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHc-CCCceEEEEECccccCcchHHhCc-ccccccCceeecCCHH--HhcCCCEEEECC
Confidence 357999999999999999999987 478888776554443333333222 1111 12233333322 346899999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.... .+++..+.++|++.||.|++.
T Consensus 77 P~~~~---~~~v~~a~~aG~~VID~S~~f 102 (343)
T PRK00436 77 PHGVS---MDLAPQLLEAGVKVIDLSADF 102 (343)
T ss_pred CcHHH---HHHHHHHHhCCCEEEECCccc
Confidence 54322 678888889999999999764
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.5e-05 Score=75.43 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=70.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|++|+|+|++|.||+.++..|+.++-..++++.|++....+ +-++. ........+.+|.++..+.++++|+||++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~--a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit 83 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGV--AADLSHIDTPAKVTGYADGELWEKALRGADLVLIC 83 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccc--ccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence 6778999999889999999999986533468999998432221 11111 11133455666655556788999999999
Q ss_pred CCCCCCC-------------chHHHHHHHHHcCCcEEEeC
Q 014177 116 AGPFQQA-------------PKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 116 agp~~~~-------------~~~~v~~aa~~~gv~~vdis 142 (429)
+|..... ...+++++..+++.+.+.+.
T Consensus 84 aG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv 123 (321)
T PTZ00325 84 AGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGI 123 (321)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 9864321 13456677778888765443
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.3e-05 Score=76.56 Aligned_cols=140 Identities=19% Similarity=0.190 Sum_probs=93.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|++|.|+| +|.+|+.+++.|.+..++++ +.+++|++++.+.+.+..+ ... ..| +++++.++|+|+.|++
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~--~~~----~~~---~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTG--AKA----CLS---IDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcC--Cee----ECC---HHHHhcCCCEEEEcCC
Confidence 36899999 69999999999987522455 4467888888877765432 111 123 4455578999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCe
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE 196 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~ 196 (429)
+... ..+.+.++++|.+.+..+...- -......+.+.++++|..+.+.+|...|...+-+ -...++.
T Consensus 71 ~~~~---~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v~sga~~g~d~i~a---------~~~G~i~ 138 (265)
T PRK13304 71 VNAV---EEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYLPSGAIVGLDGIKA---------ASLGEIK 138 (265)
T ss_pred hHHH---HHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEEeCchHHhHHHHHH---------HhcCCcc
Confidence 6543 5778888999999987653110 0112346667788889888877666666533311 1245667
Q ss_pred EEEE
Q 014177 197 RLRF 200 (429)
Q Consensus 197 ~i~~ 200 (429)
.+++
T Consensus 139 ~V~~ 142 (265)
T PRK13304 139 SVTL 142 (265)
T ss_pred EEEE
Confidence 7776
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.3e-06 Score=71.54 Aligned_cols=76 Identities=28% Similarity=0.477 Sum_probs=59.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.+++++|+|+ |.+|+.++..|.+. +. +|++++|+.++++++.+.++ ...+...++.+ +.+.+.++|+|||
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~--g~~~i~i~nRt~~ra~~l~~~~~-~~~~~~~~~~~---~~~~~~~~DivI~ 81 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAAL--GAKEITIVNRTPERAEALAEEFG-GVNIEAIPLED---LEEALQEADIVIN 81 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHT--TSSEEEEEESSHHHHHHHHHHHT-GCSEEEEEGGG---HCHHHHTESEEEE
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHcC-ccccceeeHHH---HHHHHhhCCeEEE
Confidence 578899999996 66999999999997 55 59999999999999998884 22333445434 4467789999999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
|.+.
T Consensus 82 aT~~ 85 (135)
T PF01488_consen 82 ATPS 85 (135)
T ss_dssp -SST
T ss_pred ecCC
Confidence 9753
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.7e-06 Score=80.75 Aligned_cols=99 Identities=23% Similarity=0.258 Sum_probs=68.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
..++.+++|+|+||+|++|+.+++.|.+++.-.++++.+|+.+++..+..++. ..|+. .+.+.+.++|+||
T Consensus 150 g~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~------~~~i~---~l~~~l~~aDiVv 220 (340)
T PRK14982 150 GIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG------GGKIL---SLEEALPEADIVV 220 (340)
T ss_pred ccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc------cccHH---hHHHHHccCCEEE
Confidence 34678899999999999999999999864212589999999888888776543 12332 3667888999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
|+++..... .+-..-++.+.-.+|++--
T Consensus 221 ~~ts~~~~~---~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGV---EIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred ECCcCCcCC---cCCHHHhCCCeEEEEecCC
Confidence 999753321 0001122455666787743
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.9e-05 Score=73.08 Aligned_cols=78 Identities=17% Similarity=0.299 Sum_probs=67.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc-------
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.+|+|+||+..+|..++..+..+ +..|++..|+.+++.+++++++ ..+.+..+|+.|.+++...++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~--ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE--GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc--cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 58999999999999999999997 8899999999999999888775 235688899999998887766
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
.+|.+|||||.+
T Consensus 112 ~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 112 PIDNLFCCAGVA 123 (331)
T ss_pred CcceEEEecCcc
Confidence 479999999865
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.6e-05 Score=76.55 Aligned_cols=133 Identities=20% Similarity=0.288 Sum_probs=87.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.+.+++++|+|+ |.+|++++..|.+. + .+|++++|+.++++++++.+..... +..+. .+.+.+.++|+|||
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~--g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~~~~~~~~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDL--GVAEITIVNRTVERAEELAKLFGALGK-AELDL----ELQEELADFDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cchhccccCCEEEE
Confidence 356789999996 88999999999987 6 6899999999999988877642110 11111 12355678999999
Q ss_pred cCCCCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 115 AAGPFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 115 ~agp~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
+...-.. ....++...++..+.-.+|+...+. ..++-+.+++.|..++.| -.++..+.+..+
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~----~T~ll~~A~~~G~~~~~G-------~~Ml~~Qa~~~f 255 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPL----PTPFLAWAKAQGARTIDG-------LGMLVHQAAEAF 255 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCC----CCHHHHHHHHCcCeecCC-------HHHHHHHHHHHH
Confidence 9842211 1111233345566667788875442 235567788888776443 245666666554
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.9e-06 Score=70.61 Aligned_cols=82 Identities=27% Similarity=0.370 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
.++-..+|+||....|+..++.|.++ |..+++.|...++.+..++++++++-+..+|++.+++++.++. +.
T Consensus 7 ~kglvalvtggasglg~ataerlakq--gasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrl 84 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQ--GASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL 84 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhc--CceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence 45667899999999999999999998 8999999999999999999999999999999999988887765 68
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+.+||||...
T Consensus 85 d~~vncagia~ 95 (260)
T KOG1199|consen 85 DALVNCAGIAY 95 (260)
T ss_pred eeeeeccceee
Confidence 99999998654
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.7e-05 Score=76.60 Aligned_cols=133 Identities=19% Similarity=0.181 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcE-EEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSE-FAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~-~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
...++|+|+|+ |.+|++++..|.+. +. +|++++|+.++++.+++.+..... ...... +++.+.+.++|+|||
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~--G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~---~~~~~~~~~aDiVIn 198 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTL--GVERLTIFDVDPARAAALADELNARFPAARATAG---SDLAAALAAADGLVH 198 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec---cchHhhhCCCCEEEE
Confidence 45679999996 66999999999987 55 799999999999998877642211 111222 234456678999999
Q ss_pred cC--CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 115 AA--GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 115 ~a--gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
|. |...... .++-...+..+.-.+|+...+. ..++-..++++|..++.| -.++..+.+..+
T Consensus 199 aTp~Gm~~~~~-~~~~~~~l~~~~~v~DivY~P~----~T~ll~~A~~~G~~~~~G-------~~ML~~Qa~~~f 261 (284)
T PRK12549 199 ATPTGMAKHPG-LPLPAELLRPGLWVADIVYFPL----ETELLRAARALGCRTLDG-------GGMAVFQAVDAF 261 (284)
T ss_pred CCcCCCCCCCC-CCCCHHHcCCCcEEEEeeeCCC----CCHHHHHHHHCCCeEecC-------HHHHHHHHHHHH
Confidence 95 4322111 1222223444445677775442 235566788888776544 245566666554
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.3e-06 Score=78.52 Aligned_cols=71 Identities=24% Similarity=0.389 Sum_probs=57.5
Q ss_pred cCC--hHHHHHHHHHHhHcCCCceEEEEecCchh----HHHHHHHhCCCcEEEEeeCCChHHHHHHh--------cCccE
Q 014177 46 GGT--GRVGGSTAVALSKLCPDLQIVVGSRNREK----GAAMVSTLGKNSEFAEVNIYNEGSLLMAL--------RDVDL 111 (429)
Q Consensus 46 Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~----~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~--------~~~Dv 111 (429)
|++ +.||+++++.|+++ |++|++.+|+.++ ++++.++.+ .+++++|++|.+++++++ .++|+
T Consensus 1 g~~~s~GiG~aia~~l~~~--Ga~V~~~~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~ 76 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEE--GANVILTDRNEEKLADALEELAKEYG--AEVIQCDLSDEESVEALFDEAVERFGGRIDI 76 (241)
T ss_dssp STSSTSHHHHHHHHHHHHT--TEEEEEEESSHHHHHHHHHHHHHHTT--SEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred CCCCCCChHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHcC--CceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence 555 78999999999997 8999999999987 445555544 457999999999888774 46899
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
+||+++...
T Consensus 77 lV~~a~~~~ 85 (241)
T PF13561_consen 77 LVNNAGISP 85 (241)
T ss_dssp EEEEEESCT
T ss_pred EEecccccc
Confidence 999997543
|
... |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00012 Score=68.45 Aligned_cols=214 Identities=21% Similarity=0.253 Sum_probs=114.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHH-HHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGA-AMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~-~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++|.|.|++|.+|+.+++.+.+. +++++..+ +|...... .-..++. .......-+.|. +.....++|++|..
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~~~~g~d~ge~~-g~~~~gv~v~~~--~~~~~~~~DV~IDF 76 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGSLSLGSDAGELA-GLGLLGVPVTDD--LLLVKADADVLIDF 76 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCccccccchhhhc-cccccCceeecc--hhhcccCCCEEEEC
Confidence 3578999999999999999999885 67777654 55443210 0000110 111222222232 44455689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccchh--HHHHHHHHHHHHhhcC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGVS--NVMAAELVRVARNESK 192 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~s--~~~a~~~~~~~~~~~~ 192 (429)
..|... ...++.|.+++++.|.=+ +.+.. ....+.+.+++ ++++.+.-++.|.. .-+++.+++ ++
T Consensus 77 T~P~~~---~~~l~~~~~~~~~lVIGT--TGf~~e~~~~l~~~a~~--v~vv~a~NfSiGvnll~~l~~~aak-----~l 144 (266)
T COG0289 77 TTPEAT---LENLEFALEHGKPLVIGT--TGFTEEQLEKLREAAEK--VPVVIAPNFSLGVNLLFKLAEQAAK-----VL 144 (266)
T ss_pred CCchhh---HHHHHHHHHcCCCeEEEC--CCCCHHHHHHHHHHHhh--CCEEEeccchHHHHHHHHHHHHHHH-----hc
Confidence 887543 789999999998887322 22322 23345555444 78888877877752 222334443 34
Q ss_pred C--CCeEEEEEeeecCC-CCCCccHHH--HHHHHhCC-----ceEEeeCCeEEE-ecCCCCCeeeecCCCceeeeEEeec
Q 014177 193 G--EPERLRFSYYTAGT-GGAGPTILA--TSFLLLGE-----EVVAYNKGEEIT-LEPYSGMLSVDFGKGIGRKDVFLLN 261 (429)
Q Consensus 193 ~--~v~~i~~~~~~~G~-~~~g~~~~~--~~~~~~~~-----~~~v~~~G~~~~-v~~~~~~~~~~fp~~~g~~~~~~~~ 261 (429)
+ .++.+.. +...-- .++| +.+. -.+..... .....++|..-. .+..-....++-++=+|..++....
T Consensus 145 ~~~DiEIiE~-HHr~K~DAPSG-TAl~lae~ia~~~~~~~~~~~v~~r~G~~g~r~~~~Igi~svR~G~ivG~H~V~F~~ 222 (266)
T COG0289 145 DDYDIEIIEA-HHRHKKDAPSG-TALKLAEAIAEARGQDLKDEAVYGREGATGARKEGEIGIHSVRGGDIVGEHEVIFAG 222 (266)
T ss_pred CCCCEEehhh-hcccCCCCCcH-HHHHHHHHHHHhhccccccceeecccCCcCCCCCCCceeEEeecCCcceeEEEEEec
Confidence 4 4555554 211110 1122 1211 12222211 122234552211 1111223456666667888888776
Q ss_pred Cchhhhhh
Q 014177 262 LPEVRSAR 269 (429)
Q Consensus 262 ~~e~~tl~ 269 (429)
.+|..++.
T Consensus 223 ~GE~iei~ 230 (266)
T COG0289 223 EGERIEIR 230 (266)
T ss_pred CCcEEEEE
Confidence 66655543
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.04 E-value=6.3e-05 Score=90.89 Aligned_cols=82 Identities=23% Similarity=0.394 Sum_probs=62.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-----------------------------------------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE----------------------------------------- 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~----------------------------------------- 76 (429)
+++.+|||||++.||..+++.|++++ +.+|++.+|+..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~-ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQC-QAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhc-CCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence 46899999999999999999999873 589999999820
Q ss_pred ------hHHHHH---HHhCCCcEEEEeeCCChHHHHHHhc------CccEEEecCCCCC
Q 014177 77 ------KGAAMV---STLGKNSEFAEVNIYNEGSLLMALR------DVDLVVHAAGPFQ 120 (429)
Q Consensus 77 ------~~~~l~---~~l~~~v~~~~~Dl~d~~~l~~~~~------~~DvVi~~agp~~ 120 (429)
..++.. +..+.++.++.+|++|.+++.++++ ++|.|||+||...
T Consensus 2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813 2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLA 2133 (2582)
T ss_pred ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence 000111 1223467889999999998887765 4899999998643
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.6e-05 Score=79.00 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=64.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEE-EeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFA-EVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++|.|+||+|++|..+++.|.+ +|.++++ +++++....+.+.+..+ .+... ..++.+.+ .+++.+++|+||.|++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~-hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~~-~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLN-HPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPID-EEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHc-CCCceEEEEeccchhcCCChHHhCc-cccccCCceeecCC-HHHhhcCCCEEEECCC
Confidence 4799999999999999999987 5888888 44544433333332222 11111 11222111 2334458999998875
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
... ...++..+.+.|++.||++++.
T Consensus 78 ~~~---s~~~~~~~~~~G~~VIDlS~~f 102 (346)
T TIGR01850 78 HGV---SAELAPELLAAGVKVIDLSADF 102 (346)
T ss_pred chH---HHHHHHHHHhCCCEEEeCChhh
Confidence 322 2678888889999999998754
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.2e-05 Score=73.08 Aligned_cols=149 Identities=15% Similarity=0.091 Sum_probs=87.8
Q ss_pred ccccCCccCCC-------CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC
Q 014177 26 TVLDGAHFQMK-------NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN 98 (429)
Q Consensus 26 ~~~~~~~~~~~-------~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d 98 (429)
-+||+..|... ..+++++|+|+ |..+++++..|.+.+ -.+|++++|+.++++++++.+............+
T Consensus 107 ~NTD~~Gf~~~L~~~~~~~~~k~vlilGa-GGaarAi~~aL~~~g-~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~ 184 (283)
T PRK14027 107 HNTDVSGFGRGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHG-VQKLQVADLDTSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_pred EcCCHHHHHHHHHhcCcCcCCCeEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC
Confidence 46666555332 34578999996 669999999999862 2489999999999999987663211110111122
Q ss_pred hHHHHHHhcCccEEEecCCCCCC-CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQ-APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~-~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
...+.+.+.++|+|||+...-.. ....++-...+..+.-.+|+...+ ...++-..+++.|..++.| -.
T Consensus 185 ~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P----~~T~ll~~A~~~G~~~~~G-------l~ 253 (283)
T PRK14027 185 ARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMP----IETELLKAARALGCETLDG-------TR 253 (283)
T ss_pred HhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCC----CCCHHHHHHHHCCCEEEcc-------HH
Confidence 22333445679999999742211 000122122333444456766443 2235566788888776544 24
Q ss_pred HHHHHHHHHH
Q 014177 178 VMAAELVRVA 187 (429)
Q Consensus 178 ~~a~~~~~~~ 187 (429)
++..+.+..+
T Consensus 254 MLv~Qa~~~f 263 (283)
T PRK14027 254 MAIHQAVDAF 263 (283)
T ss_pred HHHHHHHHHH
Confidence 5566666554
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00018 Score=68.84 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=80.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|+||.|+|+ |.+|+.+++.|.+. ++.++..+.......+...+.+...+. . ..|.+.+ -.++|+|+-|+++
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~-~~~~l~~v~~~~~~~~~~~~~~~~~~~-~---~~d~~~l---~~~~DvVve~t~~ 71 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHD-PDLRVDWVIVPEHSIDAVRRALGEAVR-V---VSSVDAL---PQRPDLVVECAGH 71 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhC-CCceEEEEEEcCCCHHHHhhhhccCCe-e---eCCHHHh---ccCCCEEEECCCH
Confidence 469999995 99999999999874 567766554322222222222211111 1 1233333 3479999999986
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
... ......|+++|+|.+..+...- -......+.+.++++|..+.+.+|+..|..
T Consensus 72 ~~~---~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v~sga~gg~d 127 (265)
T PRK13303 72 AAL---KEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGGID 127 (265)
T ss_pred HHH---HHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEEeChHhhCHH
Confidence 533 5788999999999986553210 011223566778889999888888776643
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=97.95 E-value=7.6e-05 Score=71.43 Aligned_cols=127 Identities=20% Similarity=0.174 Sum_probs=82.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCc-hhH-HHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNR-EKG-AAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~-~~~-~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|.|+|++|.+|+.+++.+.+. ++++++. ++|+. ++. +...+..+ ....... ..|.+.+ ..++|+||.+
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d~~~~~~~~~~~~~~~~~~~~gv~~--~~d~~~l---~~~~DvVIdf 75 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFERHGSSLQGTDAGELAGIGKVGVPV--TDDLEAV---ETDPDVLIDF 75 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccccCCCHHHhcCcCcCCcee--eCCHHHh---cCCCCEEEEC
Confidence 68999999999999999999874 6888776 45432 221 11111111 0001111 1333333 3579999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
..|... ...++.|+++|++.|.-+... .......+.+.++++|++++.+..++.|..
T Consensus 76 T~p~~~---~~~~~~al~~g~~vVigttg~-~~e~~~~l~~aA~~~g~~v~~a~NfSlGv~ 132 (266)
T TIGR00036 76 TTPEGV---LNHLKFALEHGVRLVVGTTGF-SEEDKQELADLAEKAGIAAVIAPNFSIGVN 132 (266)
T ss_pred CChHHH---HHHHHHHHHCCCCEEEECCCC-CHHHHHHHHHHHhcCCccEEEECcccHHHH
Confidence 876543 688999999999998644211 112344667777888999999888888864
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=2.7e-05 Score=76.97 Aligned_cols=96 Identities=20% Similarity=0.218 Sum_probs=67.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|+|+||+|++|+.+++.|.++ +|..++..+.++.+..+.+. +. ..+....|+.+. .++++|+||-|+|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~-g~~i~v~d~~~~-----~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FK-GKELKVEDLTTF-----DFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eC-CceeEEeeCCHH-----HHcCCCEEEECCC
Confidence 468999999999999999999886 34556777776654433332 21 234455566432 2368999999886
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.... ..++....+.|+..||++++.
T Consensus 73 ~g~s---~~~~~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 73 GSVS---KKYAPKAAAAGAVVIDNSSAF 97 (334)
T ss_pred hHHH---HHHHHHHHhCCCEEEECCchh
Confidence 5432 577777888999899998753
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00011 Score=70.60 Aligned_cols=131 Identities=18% Similarity=0.277 Sum_probs=84.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+++++|+|+ |.+|+.++..|.+. +.+|++.+|+.++++.+.+.+...-.....+..+ ....++|+||||.+
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~--g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~-----~~~~~~DivInatp 187 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKA--DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE-----LPLHRVDLIINATS 187 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh-----hcccCccEEEECCC
Confidence 4678999997 77999999999986 6799999999999888877654211111122211 12357999999985
Q ss_pred CCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 118 PFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 118 p~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
.... ....++....++.+.-.+|++..+... .+.+.+++.|..++.| -.++..+....+
T Consensus 188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T----~ll~~A~~~G~~~vdG-------~~Ml~~Qa~~~f 248 (270)
T TIGR00507 188 AGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET----PFLAEAKSLGTKTIDG-------LGMLVAQAALAF 248 (270)
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC----HHHHHHHHCCCeeeCC-------HHHHHHHHHHHH
Confidence 4211 100122233456677778988655322 4567788888776544 245566666554
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.7e-05 Score=74.05 Aligned_cols=80 Identities=18% Similarity=0.127 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCC----------------hHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhCCCcEEEEeeCCCh
Q 014177 37 NRNARVLVLGGT----------------GRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 37 ~~~~~VlV~Ga~----------------G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
|.+++||||+|. ||+|+++++.|.++ |++|+++++.... ...+.. ......+..|....
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~--Ga~V~li~g~~~~~~~~~~~--~~~~~~V~s~~d~~ 76 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK--GAHVIYLHGYFAEKPNDINN--QLELHPFEGIIDLQ 76 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC--CCeEEEEeCCCcCCCcccCC--ceeEEEEecHHHHH
Confidence 467899999886 99999999999998 8999988753221 110000 01123344433334
Q ss_pred HHHHHHhc--CccEEEecCCCCC
Q 014177 100 GSLLMALR--DVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l~~~~~--~~DvVi~~agp~~ 120 (429)
+.+.+++. ++|+|||+|+...
T Consensus 77 ~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 77 DKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHhcccCCCEEEECccccc
Confidence 66777774 6999999998743
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.92 E-value=9.8e-05 Score=71.38 Aligned_cols=114 Identities=22% Similarity=0.304 Sum_probs=76.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++++|+| +|.+|+.+++.|... |.+|++.+|+.++.+...+ . .... . +.+++.+.++++|+|||+
T Consensus 148 ~l~gk~v~IiG-~G~iG~avA~~L~~~--G~~V~v~~R~~~~~~~~~~-~--g~~~--~---~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 148 TIHGSNVMVLG-FGRTGMTIARTFSAL--GARVFVGARSSADLARITE-M--GLIP--F---PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCCCEEEEEc-ChHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-C--CCee--e---cHHHHHHHhccCCEEEEC
Confidence 57789999999 588999999999987 7899999999877655432 1 1221 1 234577788899999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
.+.. ... ...++. .+.+.-.+|+++.+.- ..+ +.+++.|+..+..
T Consensus 217 ~P~~-ii~-~~~l~~-~k~~aliIDlas~Pg~----tdf-~~Ak~~G~~a~~~ 261 (287)
T TIGR02853 217 IPAL-VLT-ADVLSK-LPKHAVIIDLASKPGG----TDF-EYAKKRGIKALLA 261 (287)
T ss_pred CChH-HhC-HHHHhc-CCCCeEEEEeCcCCCC----CCH-HHHHHCCCEEEEe
Confidence 7422 111 233322 2445667888875521 134 5667788877643
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.2e-05 Score=74.75 Aligned_cols=79 Identities=16% Similarity=0.144 Sum_probs=59.1
Q ss_pred CCCeEEEEcCChHHHHH--HHHHHhHcCCCceEEEEecCchh---------------HHHHHHHhCCCcEEEEeeCCChH
Q 014177 38 RNARVLVLGGTGRVGGS--TAVALSKLCPDLQIVVGSRNREK---------------GAAMVSTLGKNSEFAEVNIYNEG 100 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~--l~~~L~~~~~g~~v~v~~R~~~~---------------~~~l~~~l~~~v~~~~~Dl~d~~ 100 (429)
.+|++||+|+++.+|.+ +++.| +. |+.+++.++..++ .++..+..+..+..+.+|+++.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~--GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GA--GADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-Hc--CCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 46899999999999999 89999 76 8888888753321 22233333334667899999988
Q ss_pred HHHHHhc-------CccEEEecCCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~ 119 (429)
+++++++ ++|++||+++..
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 8777654 689999999743
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.6e-05 Score=66.58 Aligned_cols=100 Identities=20% Similarity=0.114 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|++|..+|+||+|.+|+.+.+.+++...-.+|++..|+...-.+ ...++....+|.+..+++....+++|+.+.|.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a----t~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaL 91 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA----TDKVVAQVEVDFSKLSQLATNEQGPDVLFCAL 91 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc----ccceeeeEEechHHHHHHHhhhcCCceEEEee
Confidence 67899999999999999999999997433488888887421111 11346667788887777878888999999988
Q ss_pred CCCCCC------------chHHHHHHHHHcCCcEEE
Q 014177 117 GPFQQA------------PKCTVLEAAIETKTAYID 140 (429)
Q Consensus 117 gp~~~~------------~~~~v~~aa~~~gv~~vd 140 (429)
|..... .....+++|.+.||+.+.
T Consensus 92 gTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fv 127 (238)
T KOG4039|consen 92 GTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFV 127 (238)
T ss_pred cccccccccCceEeechHHHHHHHHHHHhCCCeEEE
Confidence 754220 123445556666665543
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.89 E-value=1.5e-05 Score=78.41 Aligned_cols=82 Identities=17% Similarity=0.087 Sum_probs=53.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC-----CCceEEEEecCch--hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC-----PDLQIVVGSRNRE--KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~-----~g~~v~v~~R~~~--~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
+.+|+|+||+|++|+.++..|..++ .+.++++.|++.. +++...-++.+-......|+.+..++.+.++++|+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 4689999999999999999998742 1348999999653 23221111110000112244434556778899999
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
|||+||...
T Consensus 82 VI~tAG~~~ 90 (325)
T cd01336 82 AILVGAMPR 90 (325)
T ss_pred EEEeCCcCC
Confidence 999998654
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.2e-05 Score=76.24 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=64.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+|++|.|+||||++|+.+++.|.++ +|..++..+..+....+.+. +.+ ...++.+.+.. + ++++|+||-++
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~--~~~----~~l~~~~~~~~-~-~~~vD~vFla~ 74 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP--FAG----KNLRVREVDSF-D-FSQVQLAFFAA 74 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec--cCC----cceEEeeCChH-H-hcCCCEEEEcC
Confidence 4479999999999999999999963 45556655543322221111 111 23444333322 2 47899999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+... ...++..+.++|+..||.|++.
T Consensus 75 p~~~---s~~~v~~~~~~G~~VIDlS~~f 100 (336)
T PRK05671 75 GAAV---SRSFAEKARAAGCSVIDLSGAL 100 (336)
T ss_pred CHHH---HHHHHHHHHHCCCeEEECchhh
Confidence 6322 2578888889999999999765
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0001 Score=67.63 Aligned_cols=104 Identities=21% Similarity=0.340 Sum_probs=72.3
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc-------------------hhHHHHHHHh---CCCc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR-------------------EKGAAMVSTL---GKNS 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~-------------------~~~~~l~~~l---~~~v 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+.. |. +++++|.+. .|.+.+++.+ .+.+
T Consensus 15 ~q~kl~~~~VlviG~-GglGs~ia~~La~~--Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v 91 (202)
T TIGR02356 15 GQQRLLNSHVLIIGA-GGLGSPAALYLAGA--GVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDI 91 (202)
T ss_pred HHHHhcCCCEEEECC-CHHHHHHHHHHHHc--CCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCC
Confidence 456688899999995 66999999999997 44 899998762 2333333333 2333
Q ss_pred EE--EEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 90 EF--AEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 90 ~~--~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++ ...++. .+.+.++++++|+||.|...... ...+-+.|.+.++++|+.+
T Consensus 92 ~i~~~~~~i~-~~~~~~~~~~~D~Vi~~~d~~~~--r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 92 QVTALKERVT-AENLELLINNVDLVLDCTDNFAT--RYLINDACVALGTPLISAA 143 (202)
T ss_pred EEEEehhcCC-HHHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 33 333343 35577788999999999864432 2456788999999998765
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.4e-05 Score=74.33 Aligned_cols=107 Identities=21% Similarity=0.317 Sum_probs=76.2
Q ss_pred CCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc---------------------hhHHHHHHH---
Q 014177 30 GAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR---------------------EKGAAMVST--- 84 (429)
Q Consensus 30 ~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~---------------------~~~~~l~~~--- 84 (429)
+...++.++.++|+|+|+ |.+|+.+++.|+.. |+ +++++|++. .|++.+++.
T Consensus 15 G~~~Q~~L~~~~VlIiG~-GglGs~va~~La~a--Gvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~ 91 (338)
T PRK12475 15 GEEGQRKIREKHVLIVGA-GALGAANAEALVRA--GIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRK 91 (338)
T ss_pred CHHHHHhhcCCcEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHH
Confidence 344567788999999996 66999999999997 55 899999874 233333332
Q ss_pred hCCC--cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 85 LGKN--SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 85 l~~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+.+. ++.+..|++ .+.++++++++|+||.|...+.. ..-+-+.|.+.++++|..+
T Consensus 92 inp~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~--r~~in~~~~~~~ip~i~~~ 148 (338)
T PRK12475 92 INSEVEIVPVVTDVT-VEELEELVKEVDLIIDATDNFDT--RLLINDLSQKYNIPWIYGG 148 (338)
T ss_pred HCCCcEEEEEeccCC-HHHHHHHhcCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 2233 445556665 35678888999999999875432 2445678999999988654
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00015 Score=69.98 Aligned_cols=134 Identities=18% Similarity=0.162 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++++|+|+ |..|++++..|.+. |. +|++++|+.++++++++.+........ +...+++...+.++|+||||
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~--G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVIna 197 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASL--GVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVST 197 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEEC
Confidence 45689999996 66999999999987 54 799999999999999887642212111 22223344556789999999
Q ss_pred CCCCCCCchHHHHHHH--------HHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAA--------IETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~~~~~~~~v~~aa--------~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
........ ...+..+ ...+.-.+|+...+ ...++-..++++|..++.| + .++..+.+..+
T Consensus 198 Tp~g~~~~-~~~l~~~~~~~~~~~~~~~~~v~D~vY~P----~~T~ll~~A~~~G~~~~~G------l-~MLv~Qa~~~f 265 (282)
T TIGR01809 198 VPADVPAD-YVDLFATVPFLLLKRKSSEGIFLDAAYDP----WPTPLVAIVSAAGWRVISG------L-QMLLHQGFAQF 265 (282)
T ss_pred CCCCCCCC-HHHhhhhhhhhccccCCCCcEEEEEeeCC----CCCHHHHHHHHCCCEEECc------H-HHHHHHHHHHH
Confidence 85322211 1222211 11233456766433 2235566778888776544 2 44556665544
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00011 Score=75.72 Aligned_cols=93 Identities=23% Similarity=0.231 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++++|+|+|+++ +|..+++.|+++ |++|++.+++. +.+++..+++. ..++++..|..+ +...++|+||
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv 73 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKL--GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVV 73 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEE
Confidence 36679999999766 999999999998 89999999875 33433333332 246677777765 2356899999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
+++|.... .+.+.+|.+.|++.+
T Consensus 74 ~~~g~~~~---~~~~~~a~~~~i~~~ 96 (450)
T PRK14106 74 VSPGVPLD---SPPVVQAHKKGIEVI 96 (450)
T ss_pred ECCCCCCC---CHHHHHHHHCCCcEE
Confidence 99986543 467777777776544
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=3.7e-05 Score=77.93 Aligned_cols=165 Identities=17% Similarity=0.167 Sum_probs=98.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch---hHHHHHH------------HhC---CCcEEEEee
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE---KGAAMVS------------TLG---KNSEFAEVN 95 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~---~~~~l~~------------~l~---~~v~~~~~D 95 (429)
+.+++|+|+||||+||+|+.+++.|++..|+. .+.+.-|... .-+++.. ..+ .++..+.+|
T Consensus 8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 34688999999999999999999999887665 5555555432 1112211 111 356778888
Q ss_pred CCChH------HHHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCC--cEEEeCCChh---------
Q 014177 96 IYNEG------SLLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKT--AYIDVCDDTI--------- 146 (429)
Q Consensus 96 l~d~~------~l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv--~~vdis~~~~--------- 146 (429)
+.+++ .++.+.+.+|+|||+|+.... .|+.++++.|.+..- -++.+|+...
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E 167 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEE 167 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccc
Confidence 87543 455567799999999975322 367788888876532 2333332110
Q ss_pred --H-----------HHHHHhhHHHHHHcCC-cEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEE
Q 014177 147 --Y-----------SQRAKSFKDRAIAANI-PAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFS 201 (429)
Q Consensus 147 --~-----------~~~~~~~~~~a~~~g~-~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~ 201 (429)
| ......+++.....-. ..+.+-...|-.+|.+++.++...+ ...++..+|.+
T Consensus 168 ~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPs 234 (467)
T KOG1221|consen 168 KPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPS 234 (467)
T ss_pred cccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCC
Confidence 0 0000011111111111 1222223448899999999998765 35567777754
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00015 Score=67.54 Aligned_cols=96 Identities=25% Similarity=0.330 Sum_probs=73.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH-HhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS-TLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~-~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
|+++|+| .|.+|+.+|+.|.+. |++|++.++++++.++... .+ ....+.+|.+|.+.|+++ +.++|+++-+.+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~--g~~Vv~Id~d~~~~~~~~~~~~--~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEE--GHNVVLIDRDEERVEEFLADEL--DTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhC--CCceEEEEcCHHHHHHHhhhhc--ceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 6899999 599999999999997 8999999999999887443 33 367899999999999988 779999998876
Q ss_pred CCCCCchHHHHHHHH-HcCCcEEEeC
Q 014177 118 PFQQAPKCTVLEAAI-ETKTAYIDVC 142 (429)
Q Consensus 118 p~~~~~~~~v~~aa~-~~gv~~vdis 142 (429)
--.. +.-+...+. +.|++++-.-
T Consensus 76 ~d~~--N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 76 NDEV--NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred CCHH--HHHHHHHHHHhcCCCcEEEE
Confidence 3221 122233333 3688887543
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0002 Score=65.16 Aligned_cols=139 Identities=19% Similarity=0.259 Sum_probs=93.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++|.++| +|.||..+++.+.+---+++ +.+.||+.+++.++.+.++.+ +.++ +++++.+.|+++-||++
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~------~~s~---ide~~~~~DlvVEaAS~ 70 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRR------CVSD---IDELIAEVDLVVEAASP 70 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCC------cccc---HHHHhhccceeeeeCCH
Confidence 4689999 79999999999876211344 566799999998887765432 2233 45566899999999986
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHH-HHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeE
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYS-QRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPER 197 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~-~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~ 197 (429)
-.. ......++++|++++.+|-..=.- .....+.+.++..|..+..-+|..-|+.-+.+.. ...++.
T Consensus 71 ~Av---~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~pSGAiGGlD~l~aar---------~g~i~~ 138 (255)
T COG1712 71 EAV---REYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYLPSGAIGGLDALAAAR---------VGGIEE 138 (255)
T ss_pred HHH---HHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEEecCccchhHHHHHHhh---------cCCeeE
Confidence 433 456677889999999877432110 1122445567777888877777777765544332 235677
Q ss_pred EEE
Q 014177 198 LRF 200 (429)
Q Consensus 198 i~~ 200 (429)
+++
T Consensus 139 V~l 141 (255)
T COG1712 139 VVL 141 (255)
T ss_pred EEE
Confidence 776
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.3e-05 Score=74.90 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH-hC--------CCcEEEEeeCCChHHHHHHhc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST-LG--------KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~-l~--------~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
|++++|.|+||+|++|+.+++.|.+ ++..+++.+.++.....+.... .+ ....-..+...+.+. +.
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~-~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~ 75 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLAN-HPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VD 75 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHc-CCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hc
Confidence 4568999999999999999999987 5778988875554332211110 00 000111222223332 35
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++|+|+-|++... ...+++.+.+.|++.||.+++.
T Consensus 76 ~~DvVf~a~p~~~---s~~~~~~~~~~G~~vIDls~~f 110 (349)
T PRK08664 76 DVDIVFSALPSDV---AGEVEEEFAKAGKPVFSNASAH 110 (349)
T ss_pred CCCEEEEeCChhH---HHHHHHHHHHCCCEEEECCchh
Confidence 8999998764322 1466788888999999999753
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=8.8e-05 Score=68.47 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=73.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC---ceEEEEecCchhHHHHHHHhC---C----CcEEEEeeCCChHHHHHHhc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD---LQIVVGSRNREKGAAMVSTLG---K----NSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g---~~v~v~~R~~~~~~~l~~~l~---~----~v~~~~~Dl~d~~~l~~~~~ 107 (429)
+.|.++|+|+...+|-++|.+|++.... ..+++.+|+.+++++..+.+. + .++++++|+++-+++..+.+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 4577999999999999999999885322 457788999999887665442 2 47889999999887776654
Q ss_pred -------CccEEEecCCCCCCCchHHHHHHHHHcCCcE
Q 014177 108 -------DVDLVVHAAGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 108 -------~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
..|.|+-+||.....| .+...+....-.+-
T Consensus 82 di~~rf~~ld~iylNAg~~~~~g-i~w~~avf~~fsnp 118 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPG-INWKAAVFGLFSNP 118 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCc-ccHHHHHHHHhhch
Confidence 6899999998765544 45555544443333
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.4e-05 Score=75.11 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
++.+|.++|||++ ..||+++++.|+++ |++|++.++.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~--Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEA--GATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHC--CCEEEEEecc
Confidence 4678999999984 56999999999998 8999997654
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0001 Score=73.84 Aligned_cols=101 Identities=22% Similarity=0.334 Sum_probs=74.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
-.++..+++||+| +|-+|.-+++.|.+++ -.+|++++|+.++++.++++++ +++...+.+...+..+|+||
T Consensus 173 ~~~L~~~~vlvIG-AGem~~lva~~L~~~g-~~~i~IaNRT~erA~~La~~~~-------~~~~~l~el~~~l~~~DvVi 243 (414)
T COG0373 173 FGSLKDKKVLVIG-AGEMGELVAKHLAEKG-VKKITIANRTLERAEELAKKLG-------AEAVALEELLEALAEADVVI 243 (414)
T ss_pred hcccccCeEEEEc-ccHHHHHHHHHHHhCC-CCEEEEEcCCHHHHHHHHHHhC-------CeeecHHHHHHhhhhCCEEE
Confidence 3447889999999 5999999999999973 2689999999999999998875 33344566788889999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCc--EEEeCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTA--YIDVCD 143 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~--~vdis~ 143 (429)
.+.+-.+..-+...++.+.+...+ .||++-
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 244 SSTSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred EecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 997643322124556666555444 467764
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00019 Score=68.92 Aligned_cols=133 Identities=19% Similarity=0.228 Sum_probs=83.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEE-EeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFA-EVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+++++|+|+ |..+++++..|++. | .+|+++.|+.++++++++.++.....+ ..+..+.+... ..|+|||+
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~--g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~----~~dliINa 197 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEA--GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE----EADLLINA 197 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc----ccCEEEEC
Confidence 4588999996 55999999999997 5 589999999999999998876332222 22232222111 69999999
Q ss_pred CCCCCCC--chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQA--PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~~--~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
....... +...+-..++..+.-..|+...+ ...++-+.++++|...+.|. .++..+.++.+.
T Consensus 198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P----~~TplL~~A~~~G~~~idGl-------~Mlv~Qaa~aF~ 261 (283)
T COG0169 198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYNP----LETPLLREARAQGAKTIDGL-------GMLVHQAAEAFE 261 (283)
T ss_pred CCCCCCCCCCCCCCcHHhcCcCCEEEEeccCC----CCCHHHHHHHHcCCeEECcH-------HHHHHHHHHHHH
Confidence 8432211 11122234444555556766443 23356677888887754442 345666666543
|
|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00055 Score=56.80 Aligned_cols=116 Identities=22% Similarity=0.310 Sum_probs=79.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
.+|.|+|+ |.+|+.....+.+..++.+++ ++++++++.+.+.+.++ +. .. +| ++++++ ++|+|+-+.
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~--~~-~~---~~---~~~ll~~~~~D~V~I~t 70 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYG--IP-VY---TD---LEELLADEDVDAVIIAT 70 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTT--SE-EE---SS---HHHHHHHTTESEEEEES
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhc--cc-ch---hH---HHHHHHhhcCCEEEEec
Confidence 37999995 889999999998865677775 67899988888877664 33 22 23 444554 799999998
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
.+... ..++..|++.|.+.+-=---..-......+.+.++++|..+.+|
T Consensus 71 p~~~h---~~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~~Vg 119 (120)
T PF01408_consen 71 PPSSH---AEIAKKALEAGKHVLVEKPLALTLEEAEELVEAAKEKGVKVMVG 119 (120)
T ss_dssp SGGGH---HHHHHHHHHTTSEEEEESSSSSSHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCcch---HHHHHHHHHcCCEEEEEcCCcCCHHHHHHHHHHHHHhCCEEEEe
Confidence 66443 78899999999966521100111234456667777888776553
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.74 E-value=2.5e-05 Score=71.19 Aligned_cols=155 Identities=17% Similarity=0.177 Sum_probs=100.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
+-+.-+|||+|+-|..|..++..|..++..-.|++.|....... .. ..-.++..|+.|...+++++- .+|-+|
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-V~----~~GPyIy~DILD~K~L~eIVVn~RIdWL~ 115 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-VT----DVGPYIYLDILDQKSLEEIVVNKRIDWLV 115 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-hc----ccCCchhhhhhccccHHHhhcccccceee
Confidence 34557899999999999999999998765557777665333211 11 223578889999999998875 789999
Q ss_pred ecCCCCC--------------CCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 114 HAAGPFQ--------------QAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 114 ~~agp~~--------------~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
|..+... ..|-.++++.|.+++.+.+..+.-..|....- .+. ..-..+--....||.||+-
T Consensus 116 HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSP-RNP----TPdltIQRPRTIYGVSKVH 190 (366)
T KOG2774|consen 116 HFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSP-RNP----TPDLTIQRPRTIYGVSKVH 190 (366)
T ss_pred eHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCC-CCC----CCCeeeecCceeechhHHH
Confidence 9753111 02446788888888877765554333322110 000 0001122233449999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEE
Q 014177 180 AAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~ 200 (429)
|+.+-+.+..+++.....+|+
T Consensus 191 AEL~GEy~~hrFg~dfr~~rf 211 (366)
T KOG2774|consen 191 AELLGEYFNHRFGVDFRSMRF 211 (366)
T ss_pred HHHHHHHHHhhcCccceeccc
Confidence 998888877777777777765
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00041 Score=67.55 Aligned_cols=84 Identities=14% Similarity=0.154 Sum_probs=60.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++.+|.|+||+|++|..+++.|.+ +|..+++....+..+ |+.+. .+.+.++|+||.|++
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~-hp~~~l~~~~s~~~~-----------------~~~~~---~~~~~~~DvvFlalp 59 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAG-RSDIELLSIPEAKRK-----------------DAAAR---RELLNAADVAILCLP 59 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhc-CCCeEEEEEecCCCC-----------------cccCc---hhhhcCCCEEEECCC
Confidence 467999999999999999999988 477777766544322 11111 234568999998874
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
... ...++..+.+.|+..||+|++-
T Consensus 60 -~~~--s~~~~~~~~~~g~~VIDlSadf 84 (313)
T PRK11863 60 -DDA--AREAVALIDNPATRVIDASTAH 84 (313)
T ss_pred -HHH--HHHHHHHHHhCCCEEEECChhh
Confidence 322 2566777778899999999764
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00011 Score=64.82 Aligned_cols=110 Identities=19% Similarity=0.231 Sum_probs=66.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|++|.++| .|.+|+.+++.|.+. +++|.+.+|++++.+++.+. . ...+ ++..++++++|+||.|...
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~---g--~~~~-----~s~~e~~~~~dvvi~~v~~ 67 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKA--GYEVTVYDRSPEKAEALAEA---G--AEVA-----DSPAEAAEQADVVILCVPD 67 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHT--TTEEEEEESSHHHHHHHHHT---T--EEEE-----SSHHHHHHHBSEEEE-SSS
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhc--CCeEEeeccchhhhhhhHHh---h--hhhh-----hhhhhHhhcccceEeeccc
Confidence 67999999 699999999999987 89999999999999888763 1 1222 2345666778988888643
Q ss_pred CCCCchHHHHHH-----HHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 119 FQQAPKCTVLEA-----AIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 119 ~~~~~~~~v~~a-----a~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
... ...++.. .+..|.-+||.++... .....+.+...+.|+..
T Consensus 68 ~~~--v~~v~~~~~i~~~l~~g~iiid~sT~~p--~~~~~~~~~~~~~g~~~ 115 (163)
T PF03446_consen 68 DDA--VEAVLFGENILAGLRPGKIIIDMSTISP--ETSRELAERLAAKGVRY 115 (163)
T ss_dssp HHH--HHHHHHCTTHGGGS-TTEEEEE-SS--H--HHHHHHHHHHHHTTEEE
T ss_pred chh--hhhhhhhhHHhhccccceEEEecCCcch--hhhhhhhhhhhhcccee
Confidence 111 0122221 1133555677765432 23334555556666543
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=71.73 Aligned_cols=105 Identities=23% Similarity=0.315 Sum_probs=73.8
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc---------------------hhHHHHHHH---hC
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR---------------------EKGAAMVST---LG 86 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~---------------------~~~~~l~~~---l~ 86 (429)
..++.++.++|+|+|+ |.+|+.+++.|+.. |. +++++|.+. .|.+..++. +.
T Consensus 17 ~~Q~~L~~~~VlVvG~-GglGs~va~~La~a--Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~in 93 (339)
T PRK07688 17 EGQQKLREKHVLIIGA-GALGTANAEMLVRA--GVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEIN 93 (339)
T ss_pred HHHHHhcCCcEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHC
Confidence 3456788899999996 77999999999997 55 899999863 222222222 22
Q ss_pred CC--cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 87 KN--SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 87 ~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+. ++.+..+++. +.+.++++++|+||.|...+.. ...+.++|.+.++++|..+
T Consensus 94 p~v~v~~~~~~~~~-~~~~~~~~~~DlVid~~Dn~~~--r~~ln~~~~~~~iP~i~~~ 148 (339)
T PRK07688 94 SDVRVEAIVQDVTA-EELEELVTGVDLIIDATDNFET--RFIVNDAAQKYGIPWIYGA 148 (339)
T ss_pred CCcEEEEEeccCCH-HHHHHHHcCCCEEEEcCCCHHH--HHHHHHHHHHhCCCEEEEe
Confidence 33 4445556643 5577788999999999764432 2567788999999988654
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00019 Score=71.63 Aligned_cols=106 Identities=18% Similarity=0.250 Sum_probs=74.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH-HhC-CCcEEEEeeCCCh-HHHHHHhc----C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS-TLG-KNSEFAEVNIYNE-GSLLMALR----D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~-~l~-~~v~~~~~Dl~d~-~~l~~~~~----~ 108 (429)
..++..|+|+||+|.+|+.+++.|+++ |+.|.+..|+.++.+.+.. ... .....+..|.... +.+....+ .
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 345688999999999999999999998 7999999999998887755 111 2234444444433 22333333 3
Q ss_pred ccEEEecCCCCCC------------CchHHHHHHHHHcCCcEEEeCC
Q 014177 109 VDLVVHAAGPFQQ------------APKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 109 ~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~~vdis~ 143 (429)
..+++-|++-... .|..++++||..+|++.+++-+
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~ 200 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVG 200 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEE
Confidence 4577777753221 2568999999999998876653
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00041 Score=55.26 Aligned_cols=88 Identities=23% Similarity=0.324 Sum_probs=61.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCC---ceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPD---LQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g---~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
||.|+| +|.+|+++++.|.+. + .+|.++ +|++++.+++.++++ +.....| ..++++.+|+||.|.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~--g~~~~~v~~~~~r~~~~~~~~~~~~~--~~~~~~~------~~~~~~~advvilav 69 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLAS--GIKPHEVIIVSSRSPEKAAELAKEYG--VQATADD------NEEAAQEADVVILAV 69 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHT--TS-GGEEEEEEESSHHHHHHHHHHCT--TEEESEE------HHHHHHHTSEEEE-S
T ss_pred CEEEEC-CCHHHHHHHHHHHHC--CCCceeEEeeccCcHHHHHHHHHhhc--cccccCC------hHHhhccCCEEEEEE
Confidence 588897 799999999999997 6 789866 999999999988764 2222222 234566899999999
Q ss_pred CCCCCCchHHHHHHH--HHcCCcEEEeC
Q 014177 117 GPFQQAPKCTVLEAA--IETKTAYIDVC 142 (429)
Q Consensus 117 gp~~~~~~~~v~~aa--~~~gv~~vdis 142 (429)
.|... ..+++.. ...+.-.|++.
T Consensus 70 ~p~~~---~~v~~~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 70 KPQQL---PEVLSEIPHLLKGKLVISIA 94 (96)
T ss_dssp -GGGH---HHHHHHHHHHHTTSEEEEES
T ss_pred CHHHH---HHHHHHHhhccCCCEEEEeC
Confidence 87654 4555544 44555566654
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00044 Score=66.90 Aligned_cols=149 Identities=11% Similarity=0.086 Sum_probs=88.2
Q ss_pred cccCCccCCC-------CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCC--cEEEEe
Q 014177 27 VLDGAHFQMK-------NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKN--SEFAEV 94 (429)
Q Consensus 27 ~~~~~~~~~~-------~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~--v~~~~~ 94 (429)
+||+..+... ..+++++|+|+ |..+++++..|...+ -.+|++++|+. ++++.+++.+... ......
T Consensus 105 NTD~~Gf~~~l~~~~~~~~~k~vlvlGa-GGaarAi~~~l~~~g-~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~ 182 (288)
T PRK12749 105 NTDGTGHIRAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEG-LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT 182 (288)
T ss_pred ecCHHHHHHHHHhcCCCcCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe
Confidence 5555554332 45689999997 557999999998862 24899999995 5888887766421 111222
Q ss_pred eCCChHHHHHHhcCccEEEecCCCCCC--CchHHHH-HHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC
Q 014177 95 NIYNEGSLLMALRDVDLVVHAAGPFQQ--APKCTVL-EAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 95 Dl~d~~~l~~~~~~~DvVi~~agp~~~--~~~~~v~-~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~ 171 (429)
+..+.+.+.+.+.++|+|||+...-.. ....... ...+..+.-.+|+...+. ..++-..++++|..++.|
T Consensus 183 ~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~----~T~ll~~A~~~G~~~~~G--- 255 (288)
T PRK12749 183 DLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPH----MTKLLQQAQQAGCKTIDG--- 255 (288)
T ss_pred chhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCc----cCHHHHHHHHCCCeEECC---
Confidence 333333355566789999999743211 1100111 122334445567765442 335667788888776544
Q ss_pred ccchhHHHHHHHHHHHH
Q 014177 172 YPGVSNVMAAELVRVAR 188 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~ 188 (429)
-.++..+.+..+.
T Consensus 256 ----l~ML~~Qa~~~f~ 268 (288)
T PRK12749 256 ----YGMLLWQGAEQFT 268 (288)
T ss_pred ----HHHHHHHHHHHHH
Confidence 2456666666543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00045 Score=63.17 Aligned_cols=118 Identities=17% Similarity=0.058 Sum_probs=76.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLV 112 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvV 112 (429)
..++++|+|+|+|. |.+|+.+++.|.+. |++|++.|++.++++.+.+.++ .+ .+|. + +++. ++|++
T Consensus 23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~--G~~Vvv~D~~~~~~~~~~~~~g--~~--~v~~---~---~l~~~~~Dv~ 89 (200)
T cd01075 23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEE--GAKLIVADINEEAVARAAELFG--AT--VVAP---E---EIYSVDADVF 89 (200)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcC--CE--EEcc---h---hhccccCCEE
Confidence 34578899999995 78999999999987 8999999999988888776543 22 2232 2 2232 79999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~ 171 (429)
+.|+...... . +.+.+.+++.|--.....+.. ..-++..++.|+..+|....
T Consensus 90 vp~A~~~~I~--~---~~~~~l~~~~v~~~AN~~~~~--~~~~~~L~~~Gi~~~Pd~~~ 141 (200)
T cd01075 90 APCALGGVIN--D---DTIPQLKAKAIAGAANNQLAD--PRHGQMLHERGILYAPDYVV 141 (200)
T ss_pred EecccccccC--H---HHHHHcCCCEEEECCcCccCC--HhHHHHHHHCCCEEeCceee
Confidence 9998532211 1 223455677764444443321 12234556788887775443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00012 Score=73.82 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=59.7
Q ss_pred CCCCCCeEEEEcC----------------ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC
Q 014177 35 MKNRNARVLVLGG----------------TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN 98 (429)
Q Consensus 35 ~~~~~~~VlV~Ga----------------~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d 98 (429)
.++.+++|+|+|| +|.+|.++++.|.++ |++|++++++.+ ++ .+. ....+|+++
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~--Ga~V~~v~~~~~-~~-----~~~--~~~~~dv~~ 253 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR--GADVTLVSGPVN-LP-----TPA--GVKRIDVES 253 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC--CCEEEEeCCCcc-cc-----CCC--CcEEEccCC
Confidence 3578899999999 899999999999998 899999988753 11 111 245679999
Q ss_pred hHHHHHHhc----CccEEEecCCCCC
Q 014177 99 EGSLLMALR----DVDLVVHAAGPFQ 120 (429)
Q Consensus 99 ~~~l~~~~~----~~DvVi~~agp~~ 120 (429)
.+++.+.+. ++|++||+||...
T Consensus 254 ~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 254 AQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHHHhcCCCCEEEEcccccc
Confidence 877766653 6899999998743
|
|
| >COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0014 Score=64.75 Aligned_cols=148 Identities=21% Similarity=0.195 Sum_probs=96.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-c-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-L-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
+++++|.|+|++|..+...+..+.+. ++ . -+-+++++++++++++++++. . ...+| ++++++ ++|+|
T Consensus 1 ~~~irvgiiG~G~~~~~~~~~~~~~~-~~~~~~vav~d~~~~~a~~~a~~~~~--~---~~~~~---~~~ll~~~~iD~V 71 (342)
T COG0673 1 MKMIRVGIIGAGGIAGKAHLPALAAL-GGGLELVAVVDRDPERAEAFAEEFGI--A---KAYTD---LEELLADPDIDAV 71 (342)
T ss_pred CCeeEEEEEcccHHHHHHhHHHHHhC-CCceEEEEEecCCHHHHHHHHHHcCC--C---cccCC---HHHHhcCCCCCEE
Confidence 45689999997666667788888875 33 2 455668999999999887752 2 22333 555666 48999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
+.+..+... ..++.+|+++|+|.+- ++.+ ......+.+.++++|..+.++--.-+...-..++.++..
T Consensus 72 ~Iatp~~~H---~e~~~~AL~aGkhVl~EKPla~t---~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~--- 142 (342)
T COG0673 72 YIATPNALH---AELALAALEAGKHVLCEKPLALT---LEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDS--- 142 (342)
T ss_pred EEcCCChhh---HHHHHHHHhcCCEEEEcCCCCCC---HHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhc---
Confidence 999865543 6889999999998762 1212 224446677788888777666433333333344555542
Q ss_pred hcCCCCeEEEEEe
Q 014177 190 ESKGEPERLRFSY 202 (429)
Q Consensus 190 ~~~~~v~~i~~~~ 202 (429)
-...++..++..+
T Consensus 143 g~lG~v~~~~~~~ 155 (342)
T COG0673 143 GALGEVVSVQASF 155 (342)
T ss_pred CCcCceEEEEEEe
Confidence 2455667777643
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00021 Score=60.94 Aligned_cols=99 Identities=24% Similarity=0.352 Sum_probs=66.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch-------------------hHHHHHHH---hCCC--cEEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE-------------------KGAAMVST---LGKN--SEFAE 93 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~-------------------~~~~l~~~---l~~~--v~~~~ 93 (429)
.++|+|+|+ |.+|+.+++.|+.. |. +++++|.+.- |.+.+++. +.+. ++...
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~--Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~ 78 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARS--GVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP 78 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHH--TTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHh--CCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee
Confidence 579999995 66999999999998 44 7888885321 23333322 2233 44455
Q ss_pred eeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 94 VNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 94 ~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.++ +.+.+.++++++|+||.|...... ...+.+.|.+.++++|+...
T Consensus 79 ~~~-~~~~~~~~~~~~d~vi~~~d~~~~--~~~l~~~~~~~~~p~i~~~~ 125 (135)
T PF00899_consen 79 EKI-DEENIEELLKDYDIVIDCVDSLAA--RLLLNEICREYGIPFIDAGV 125 (135)
T ss_dssp SHC-SHHHHHHHHHTSSEEEEESSSHHH--HHHHHHHHHHTT-EEEEEEE
T ss_pred ccc-ccccccccccCCCEEEEecCCHHH--HHHHHHHHHHcCCCEEEEEe
Confidence 555 345677888899999999875432 25677789999999987653
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00033 Score=67.13 Aligned_cols=106 Identities=21% Similarity=0.218 Sum_probs=70.7
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCCcE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKNSE 90 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~v~ 90 (429)
.++.++..+|+|+|+ |.+|+.++..|+..+-+ +++++|.+.- |.+..++ ++.+.++
T Consensus 21 ~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG-~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~ 98 (287)
T PRK08223 21 EQQRLRNSRVAIAGL-GGVGGIHLLTLARLGIG-KFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELE 98 (287)
T ss_pred HHHHHhcCCEEEECC-CHHHHHHHHHHHHhCCC-eEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCE
Confidence 456678899999996 56999999999998533 7888875421 2222222 2333333
Q ss_pred --EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 91 --FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 91 --~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
.+...++. +.+.++++++|+||++...+.......+-++|.+.++++|..
T Consensus 99 V~~~~~~l~~-~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 99 IRAFPEGIGK-ENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTA 150 (287)
T ss_pred EEEEecccCc-cCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 34444443 446778899999999886432111256778999999998864
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00043 Score=67.26 Aligned_cols=112 Identities=23% Similarity=0.312 Sum_probs=73.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++++|+| .|.+|+.++..|... |.+|++.+|++++.+... .++ .+.+ +.+.+.+.++++|+|||+
T Consensus 149 ~l~g~kvlViG-~G~iG~~~a~~L~~~--Ga~V~v~~r~~~~~~~~~-~~G--~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLG-FGRTGMTLARTLKAL--GANVTVGARKSAHLARIT-EMG--LSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH-HcC--Ceee-----cHHHHHHHhCCCCEEEEC
Confidence 45679999999 588999999999987 789999999987654433 232 2222 234577788899999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
+++... . ...++ ..+.+.-.+|+++...-. .+ +.+++.|+..+
T Consensus 218 ~p~~~i-~-~~~l~-~~~~g~vIIDla~~pggt----d~-~~a~~~Gv~~~ 260 (296)
T PRK08306 218 IPALVL-T-KEVLS-KMPPEALIIDLASKPGGT----DF-EYAEKRGIKAL 260 (296)
T ss_pred CChhhh-h-HHHHH-cCCCCcEEEEEccCCCCc----Ce-eehhhCCeEEE
Confidence 753211 1 12222 234566678888665221 22 34566777766
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00022 Score=66.62 Aligned_cols=105 Identities=21% Similarity=0.241 Sum_probs=71.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~l---~~~-- 88 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+.+ +++++|.+. .|.+.+++.+ .+.
T Consensus 15 ~q~~L~~~~VlivG~-GglGs~va~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~ 92 (228)
T cd00757 15 GQEKLKNARVLVVGA-GGLGSPAAEYLAAAGVG-KLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVE 92 (228)
T ss_pred HHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCE
Confidence 355678899999995 66999999999997432 788876432 1233333332 232
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.+..+++ .+.+.++++++|+||.|...... ...+-+.|.+.++++|+.+
T Consensus 93 i~~~~~~i~-~~~~~~~~~~~DvVi~~~d~~~~--r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 93 IEAYNERLD-AENAEELIAGYDLVLDCTDNFAT--RYLINDACVKLGKPLVSGA 143 (228)
T ss_pred EEEecceeC-HHHHHHHHhCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 344444443 45577788899999999875432 2457788999999999865
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00049 Score=64.88 Aligned_cols=126 Identities=18% Similarity=0.173 Sum_probs=85.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC-CCceEEE-EecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC-PDLQIVV-GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ 115 (429)
.+||.|+| +|.||+.+++.|.+.. .++++.. .+|+.++.+++... +++ .++++++ ..++|+|+-|
T Consensus 2 ~~rvgiIG-~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~---------~~~--~~~l~~ll~~~~DlVVE~ 69 (267)
T PRK13301 2 THRIAFIG-LGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR---------VAL--LDGLPGLLAWRPDLVVEA 69 (267)
T ss_pred ceEEEEEC-ccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc---------Ccc--cCCHHHHhhcCCCEEEEC
Confidence 47899999 7999999999987631 2355544 45666666555431 222 2235554 4589999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHH--HHHHhhHHHHHHcCCcEEecCCCccchhHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYS--QRAKSFKDRAIAANIPAITTGGIYPGVSNVMA 180 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~--~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a 180 (429)
|++... ....+.+++.|++.+-+|-.. +. .....+.+.+++.|..+.+-+|..-|+..+-+
T Consensus 70 A~~~av---~e~~~~iL~~g~dlvv~SvGA-LaD~~~~~~l~~~A~~~g~~i~ipSGAigGlD~l~a 132 (267)
T PRK13301 70 AGQQAI---AEHAEGCLTAGLDMIICSAGA-LADDALRARLIAAAEAGGARIRVPAGAIAGLDYLQA 132 (267)
T ss_pred CCHHHH---HHHHHHHHhcCCCEEEEChhH-hcCHHHHHHHHHHHHhCCCEEEEeChHHHhHHHHHH
Confidence 987543 566778899999999877322 11 12234566778888899888888888766544
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.65 E-value=7e-05 Score=63.04 Aligned_cols=94 Identities=22% Similarity=0.285 Sum_probs=59.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCch-hH-HHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNRE-KG-AAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~-~~-~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+||+|+|++|.+|+.+++.+.++ ++++++.+ +|+.+ .. +.+.+..+ .. ...+.-.++++++++.+|+||...
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~~~~~g~d~g~~~~--~~--~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKPSAKVGKDVGELAG--IG--PLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTTSTTTTSBCHHHCT--SS--T-SSBEBS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCCcccccchhhhhhC--cC--CcccccchhHHHhcccCCEEEEcC
Confidence 48999999999999999999984 68887654 56552 11 11111111 00 112222245777888899999998
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
.|.. ....++.|+++|++.|--
T Consensus 76 ~p~~---~~~~~~~~~~~g~~~ViG 97 (124)
T PF01113_consen 76 NPDA---VYDNLEYALKHGVPLVIG 97 (124)
T ss_dssp -HHH---HHHHHHHHHHHT-EEEEE
T ss_pred ChHH---hHHHHHHHHhCCCCEEEE
Confidence 6543 367899999999999853
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00043 Score=68.05 Aligned_cols=157 Identities=11% Similarity=0.013 Sum_probs=89.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-----eEEEEecCch--hHHHHHHHhCCCc----EEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-----QIVVGSRNRE--KGAAMVSTLGKNS----EFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-----~v~v~~R~~~--~~~~l~~~l~~~v----~~~~~Dl~d~~~l~~~~~ 107 (429)
+++|.|+|++|.||+.++..|+.++--- ++++.|.+.. +++..+-++..-. .-+...-. ..+.++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~----~~~~~~ 77 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDD----PNVAFK 77 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecC----cHHHhC
Confidence 4799999998999999999998753222 7999998543 3443333322100 00112111 245678
Q ss_pred CccEEEecCCCCCCCc---------h----HHHHHHHHHcCC-c--EEEeCCChhHHHHHHhhHHHHHHcC-CcEEecCC
Q 014177 108 DVDLVVHAAGPFQQAP---------K----CTVLEAAIETKT-A--YIDVCDDTIYSQRAKSFKDRAIAAN-IPAITTGG 170 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~---------~----~~v~~aa~~~gv-~--~vdis~~~~~~~~~~~~~~~a~~~g-~~~i~~~g 170 (429)
++|+||.+||.....+ + ..+.+...+.+- + ++.++.-.+... .+ ..+..| .+ ..
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t---~~--~~k~sg~~p----~~ 148 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNA---LI--AMKNAPDIP----PD 148 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHH---HH--HHHHcCCCC----hH
Confidence 9999999998643222 1 122333334431 2 233332222111 11 011221 22 01
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
-.+|.+++-..++...+++.++.+...++. |+++|+++
T Consensus 149 ~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~-~~V~GeHG 186 (322)
T cd01338 149 NFTAMTRLDHNRAKSQLAKKAGVPVTDVKN-MVIWGNHS 186 (322)
T ss_pred heEEehHHHHHHHHHHHHHHhCcChhHeEE-EEEEeCCc
Confidence 237778888888888888888888888886 45567663
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00028 Score=69.18 Aligned_cols=122 Identities=24% Similarity=0.318 Sum_probs=78.4
Q ss_pred ccccccccccccccccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc
Q 014177 10 STATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS 89 (429)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v 89 (429)
++-++++....|...--+.-......++..++|+|+|+ |.+|+.+++.|...+ ..+|++++|++++.+++++.++.
T Consensus 149 r~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g-~~~V~v~~r~~~ra~~la~~~g~-- 224 (311)
T cd05213 149 RTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKG-VAEITIANRTYERAEELAKELGG-- 224 (311)
T ss_pred hhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHcCC--
Confidence 34455666665554333221111111256799999995 999999999998742 46899999999998888887753
Q ss_pred EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHc----CCcEEEeCC
Q 014177 90 EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIET----KTAYIDVCD 143 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~----gv~~vdis~ 143 (429)
.. .+.+++.+.+.++|+||.|.+.... ..+++...+. +.-.+|++-
T Consensus 225 ~~-----~~~~~~~~~l~~aDvVi~at~~~~~---~~~~~~~~~~~~~~~~~viDlav 274 (311)
T cd05213 225 NA-----VPLDELLELLNEADVVISATGAPHY---AKIVERAMKKRSGKPRLIVDLAV 274 (311)
T ss_pred eE-----EeHHHHHHHHhcCCEEEECCCCCch---HHHHHHHHhhCCCCCeEEEEeCC
Confidence 22 2234566778899999999875432 2334443332 233568774
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0005 Score=58.26 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=74.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++++++++| +| .|..++..|.+. |++|++.|.++...+...+. .++++..|+.+++ -++-+++|+|+.+=.
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~--G~~ViaIDi~~~aV~~a~~~---~~~~v~dDlf~p~--~~~y~~a~liysirp 86 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKES--GFDVIVIDINEKAVEKAKKL---GLNAFVDDLFNPN--LEIYKNAKLIYSIRP 86 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHC--CCEEEEEECCHHHHHHHHHh---CCeEEECcCCCCC--HHHHhcCCEEEEeCC
Confidence 447899999 57 899999999987 89999999999977766542 4789999999876 245679999999876
Q ss_pred CCCCCchHHHHHHHHHcCCcEEE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYID 140 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vd 140 (429)
|.... .++++.|.+.+++.+.
T Consensus 87 p~el~--~~~~~la~~~~~~~~i 107 (134)
T PRK04148 87 PRDLQ--PFILELAKKINVPLII 107 (134)
T ss_pred CHHHH--HHHHHHHHHcCCCEEE
Confidence 64432 5889999999999864
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00038 Score=70.06 Aligned_cols=104 Identities=20% Similarity=0.296 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-------------------chhHHHHHHHh---CCCcE-
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-------------------REKGAAMVSTL---GKNSE- 90 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-------------------~~~~~~l~~~l---~~~v~- 90 (429)
++.++.++|+|+|+ |.+|+.+++.|+..+.+ +++++|++ ..|.+.+++.+ .+.++
T Consensus 130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 207 (376)
T PRK08762 130 QRRLLEARVLLIGA-GGLGSPAALYLAAAGVG-TLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQV 207 (376)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEE
Confidence 34577899999995 66999999999997422 89999987 34555444443 23333
Q ss_pred -EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 91 -FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 91 -~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
.....++ .+.+.++++++|+||+|...+.. ...+-++|.+.++++|..+
T Consensus 208 ~~~~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~--r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 208 EAVQERVT-SDNVEALLQDVDVVVDGADNFPT--RYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred EEEeccCC-hHHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 3333333 34577788899999999875432 1457788999999998764
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00017 Score=71.51 Aligned_cols=94 Identities=19% Similarity=0.234 Sum_probs=64.4
Q ss_pred eEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
+|.|+||+|++|+.+++.|.++ +|..++....++....+.+. +. ..+....|+.. ..++++|+||-|+|..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~~-~~~~~~~~~~~-----~~~~~~D~v~~a~g~~ 72 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--FK-GKELEVNEAKI-----ESFEGIDIALFSAGGS 72 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--eC-CeeEEEEeCCh-----HHhcCCCEEEECCCHH
Confidence 5899999999999999999875 34455555555544333332 11 24555666641 2347899999998754
Q ss_pred CCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 120 QQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 120 ~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.. ..++....+.|+..||.+++.
T Consensus 73 ~s---~~~a~~~~~~G~~VID~ss~~ 95 (339)
T TIGR01296 73 VS---KEFAPKAAKCGAIVIDNTSAF 95 (339)
T ss_pred HH---HHHHHHHHHCCCEEEECCHHH
Confidence 32 577777888999889998643
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.003 Score=61.86 Aligned_cols=97 Identities=19% Similarity=0.199 Sum_probs=59.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhH-cCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSK-LCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~-~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|+|+|+||+|.+|++++..|.. .....++++.+|++.. +..+-.+. +....+.. .+.+++.+.++++|+||.|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIita 77 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISA 77 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcC
Confidence 6899999999999999998855 2234688999987542 21111111 11112222 12234556778999999999
Q ss_pred CCCCCCc-------------hHHHHHHHHHcCCcEE
Q 014177 117 GPFQQAP-------------KCTVLEAAIETKTAYI 139 (429)
Q Consensus 117 gp~~~~~-------------~~~v~~aa~~~gv~~v 139 (429)
|.....+ ...++++..+++.+.+
T Consensus 78 G~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~i 113 (312)
T PRK05086 78 GVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKAC 113 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 8644321 2345556666666554
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00053 Score=66.37 Aligned_cols=82 Identities=16% Similarity=0.182 Sum_probs=58.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
.+|.|+|++|++|..+++.|.. +|..++..+..+.. .+..+ ..++++++|+||-|++.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~-HP~~el~~l~s~~~-----------------~~~~~---~~~~~~~~D~vFlalp~- 59 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSG-RDDIELLSIAPDRR-----------------KDAAE---RAKLLNAADVAILCLPD- 59 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhC-CCCeEEEEEecccc-----------------cCcCC---HhHhhcCCCEEEECCCH-
Confidence 4799999999999999999998 58888776643221 11112 23456789999988643
Q ss_pred CCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 120 QQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 120 ~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.. ...++..+.+.|+..||+|++-
T Consensus 60 ~~--s~~~~~~~~~~g~~VIDlSadf 83 (310)
T TIGR01851 60 DA--AREAVSLVDNPNTCIIDASTAY 83 (310)
T ss_pred HH--HHHHHHHHHhCCCEEEECChHH
Confidence 21 2566777778899999999764
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00046 Score=65.10 Aligned_cols=96 Identities=24% Similarity=0.315 Sum_probs=74.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
++++|||+|||+ =|+.+++.|.+. ++++++..-..... ... .....+..-+.|.+++.++++ ++++||.+
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~~--g~~v~~Svat~~g~---~~~--~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA 72 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAAA--GVDIVLSLAGRTGG---PAD--LPGPVRVGGFGGAEGLAAYLREEGIDLVIDA 72 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHhC--CCeEEEEEccCCCC---ccc--CCceEEECCCCCHHHHHHHHHHCCCCEEEEC
Confidence 467899999998 899999999886 67776654333221 111 245667777778899999997 79999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
.-||...-+.++.++|.+.+++|+-+
T Consensus 73 THPfA~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 73 THPYAAQISANAAAACRALGIPYLRL 98 (248)
T ss_pred CCccHHHHHHHHHHHHHHhCCcEEEE
Confidence 99987544578999999999999954
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00045 Score=63.79 Aligned_cols=105 Identities=21% Similarity=0.259 Sum_probs=69.0
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc------------------hhHHHHHHH---hCCC--c
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR------------------EKGAAMVST---LGKN--S 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~------------------~~~~~l~~~---l~~~--v 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+.+ +++++|.+. .|.+.+++. +.+. +
T Consensus 22 ~q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v 99 (212)
T PRK08644 22 LLEKLKKAKVGIAGA-GGLGSNIAVALARSGVG-NLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEI 99 (212)
T ss_pred HHHHHhCCCEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEE
Confidence 455678899999996 66999999999997432 688888762 133333332 2233 3
Q ss_pred EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHc-CCcEEEeC
Q 014177 90 EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIET-KTAYIDVC 142 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~-gv~~vdis 142 (429)
+.+...+++ +.+.++++++|+||.|...+.. ...+.+.|.+. ++++|..+
T Consensus 100 ~~~~~~i~~-~~~~~~~~~~DvVI~a~D~~~~--r~~l~~~~~~~~~~p~I~~~ 150 (212)
T PRK08644 100 EAHNEKIDE-DNIEELFKDCDIVVEAFDNAET--KAMLVETVLEHPGKKLVAAS 150 (212)
T ss_pred EEEeeecCH-HHHHHHHcCCCEEEECCCCHHH--HHHHHHHHHHhCCCCEEEee
Confidence 334444544 4466778889999988654322 14566778887 88887553
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0006 Score=71.58 Aligned_cols=132 Identities=11% Similarity=0.143 Sum_probs=83.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~ 114 (429)
.+++++++|+|+ |.+|++++..|.+. |++|++++|+.++++.+.+.++. .. .+..+ +.+. ....|+|||
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~--G~~V~i~nR~~e~a~~la~~l~~--~~--~~~~~---~~~~~~~~~diiIN 445 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEK--GARVVIANRTYERAKELADAVGG--QA--LTLAD---LENFHPEEGMILAN 445 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCC--ce--eeHhH---hhhhccccCeEEEe
Confidence 356789999997 67999999999997 67999999999999888876632 11 22222 2222 236799999
Q ss_pred cCCCCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 115 AAGPFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 115 ~agp~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
+.+.-.. ....++-...++.+.-.+|+...+. ..++-..+++.|..++.| ..++..+.+..+.
T Consensus 446 tT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~----~T~ll~~A~~~G~~~~~G-------l~MLv~Qa~~~f~ 510 (529)
T PLN02520 446 TTSVGMQPNVDETPISKHALKHYSLVFDAVYTPK----ITRLLREAEESGAIIVSG-------TEMFIRQAYEQFE 510 (529)
T ss_pred cccCCCCCCCCCCcccHhhCCCCCEEEEeccCCC----cCHHHHHHHHCCCeEeCc-------HHHHHHHHHHHHH
Confidence 9843221 1111232233344444577765542 235567788888776443 3556666666543
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0017 Score=64.63 Aligned_cols=124 Identities=18% Similarity=0.123 Sum_probs=77.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE--ecCchhHHHHHHHhCCCcEEEEeeCC------------------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG--SRNREKGAAMVSTLGKNSEFAEVNIY------------------N 98 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~--~R~~~~~~~l~~~l~~~v~~~~~Dl~------------------d 98 (429)
||+|.|+|+||.||...++.+.+....++|+.. +++.+++.+..+++.++.- +..|-. .
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v-~i~~~~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYV-VVADEEAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEE-EEcCHHHHHHHHHhhccCCceEEEC
Confidence 479999999999999999888763224666654 6888888888887764321 112211 1
Q ss_pred hHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 99 EGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 99 ~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
.+.+.+++. ++|+|+++..-+. | ....-+|+++|.+.. ++.-......-..+.+.+++.|..+++
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~a--G-l~ptl~Ai~aGK~Va-LANKEslV~aG~~i~~~a~~~g~~i~P 146 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAA--G-LLPTLAAIRAGKRIA-LANKESLVCAGELVMDAAKKSGAQILP 146 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcc--c-HHHHHHHHHCCCcEE-EeCHHHHHhhHHHHHHHHHHcCCeEEE
Confidence 334555554 5799999875332 2 345667889996654 433332222222445566677777655
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00084 Score=67.35 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=71.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+...+|+|+|+ |.+|..+++.|... |.+|++++|++++++.+...++. .+..+..+.+.+.+.++++|+||+++
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~l--Ga~V~v~d~~~~~~~~l~~~~g~---~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGL--GATVTILDINIDRLRQLDAEFGG---RIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcCc---eeEeccCCHHHHHHHHccCCEEEEcc
Confidence 35678999995 88999999999987 78999999999888777665532 23345667778888999999999997
Q ss_pred CCCCCC----chHHHHHHHHHcCCcEEEeCCC
Q 014177 117 GPFQQA----PKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 117 gp~~~~----~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+..... -+...++. .+.+.-.+|++.+
T Consensus 239 ~~~g~~~p~lit~~~l~~-mk~g~vIvDva~d 269 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQ-MKPGAVIVDVAID 269 (370)
T ss_pred ccCCCCCCcCcCHHHHhc-CCCCCEEEEEecC
Confidence 431110 01233332 3455667787754
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00043 Score=68.58 Aligned_cols=97 Identities=18% Similarity=0.248 Sum_probs=61.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.++|.|+||+|++|+.+++.|.++ +|..++..+.......+.+.. ...+....++. .+ .++++|+||.|+
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~---~~~~~~v~~~~-~~----~~~~~D~vf~a~ 77 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF---EGRDYTVEELT-ED----SFDGVDIALFSA 77 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee---cCceeEEEeCC-HH----HHcCCCEEEECC
Confidence 3478999999999999999999875 345566544322221111111 11233333332 22 246899999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.-. ...++..+.+.|+..||.|++.
T Consensus 78 p~~~---s~~~~~~~~~~g~~VIDlS~~f 103 (344)
T PLN02383 78 GGSI---SKKFGPIAVDKGAVVVDNSSAF 103 (344)
T ss_pred CcHH---HHHHHHHHHhCCCEEEECCchh
Confidence 5332 2567777778899999999764
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00076 Score=58.08 Aligned_cols=76 Identities=28% Similarity=0.318 Sum_probs=55.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+||.|+|++|.+|+.++..|....-..++++.|++.++++..+.++. ......... .+. +.++++|+||.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~----~~~~~aDivvi 75 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDY----EALKDADIVVI 75 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSG----GGGTTESEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-ccc----cccccccEEEE
Confidence 58999999999999999999987545689999999887776655442 112222222 333 45779999999
Q ss_pred cCCCCC
Q 014177 115 AAGPFQ 120 (429)
Q Consensus 115 ~agp~~ 120 (429)
++|...
T Consensus 76 tag~~~ 81 (141)
T PF00056_consen 76 TAGVPR 81 (141)
T ss_dssp TTSTSS
T ss_pred eccccc
Confidence 998644
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00029 Score=69.37 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEe-eCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV-NIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~-Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.++|.|+||||++|..+.+.|.++ +|..++..+..+....+.+. +... + +.+ |+ +.+ .+.++|+||.+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~--~~~~-~-~~v~~~---~~~--~~~~~Dvvf~a 73 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR--FGGK-S-VTVQDA---AEF--DWSQAQLAFFV 73 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE--ECCc-c-eEEEeC---chh--hccCCCEEEEC
Confidence 4579999999999999999999875 57778777654433222221 1111 1 112 22 211 23689999988
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++.-. ...++..+.+.|+..||.+++.
T Consensus 74 ~p~~~---s~~~~~~~~~~g~~VIDlS~~f 100 (336)
T PRK08040 74 AGREA---SAAYAEEATNAGCLVIDSSGLF 100 (336)
T ss_pred CCHHH---HHHHHHHHHHCCCEEEECChHh
Confidence 75322 2577777888999999998754
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00051 Score=64.89 Aligned_cols=97 Identities=26% Similarity=0.348 Sum_probs=71.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+|||+|||+ =|+.+++.|.+. ++ +++..-. +....+..........+..-+.|.+.+.++++ +++.||.+.-
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~--g~-v~~sv~t-~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH 75 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEA--GY-VIVSVAT-SYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH 75 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhc--CC-EEEEEEh-hhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC
Confidence 6899999998 899999999997 55 4432222 22222322211245667777768899999996 8999999999
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEe
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
||...-+.++.++|.+.|++|+-+
T Consensus 76 PfA~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 76 PFAAEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred chHHHHHHHHHHHHhhcCcceEEE
Confidence 986544578999999999999843
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00097 Score=62.77 Aligned_cols=105 Identities=13% Similarity=0.204 Sum_probs=69.6
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCcE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNSE 90 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v~ 90 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|.+.- |.+.+++. +.+.++
T Consensus 18 ~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg-~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~ 95 (240)
T TIGR02355 18 GQEALKASRVLIVGL-GGLGCAASQYLAAAGVG-NLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIA 95 (240)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCC-EEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcE
Confidence 456688899999996 66999999999997433 7888876432 22222222 223333
Q ss_pred EEEe--eCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 91 FAEV--NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 91 ~~~~--Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+... .+ +.+.+.++++++|+||.|...+.. ...+-++|.+.++++|.-+
T Consensus 96 i~~~~~~i-~~~~~~~~~~~~DlVvd~~D~~~~--r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 96 INPINAKL-DDAELAALIAEHDIVVDCTDNVEV--RNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred EEEEeccC-CHHHHHHHhhcCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 3332 33 334567788899999999865432 2456678899999988643
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00063 Score=67.85 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=71.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~l---~~~-- 88 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|.+. .|.+..++.+ .+.
T Consensus 22 ~q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~ 99 (355)
T PRK05597 22 GQQSLFDAKVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVK 99 (355)
T ss_pred HHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcE
Confidence 456678899999996 66999999999997433 788888653 2333333332 233
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.....++. +...++++++|+||.|...+.. ..-+-++|.+.++++|..+
T Consensus 100 v~~~~~~i~~-~~~~~~~~~~DvVvd~~d~~~~--r~~~n~~c~~~~ip~v~~~ 150 (355)
T PRK05597 100 VTVSVRRLTW-SNALDELRDADVILDGSDNFDT--RHLASWAAARLGIPHVWAS 150 (355)
T ss_pred EEEEEeecCH-HHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 3344445543 4456778899999999865432 1346678999999988543
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00095 Score=68.79 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=72.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp 118 (429)
|+|+|+|+ |.+|+.+++.|.++ ++++++.++++++.+.+.+.. .+.++.+|.++.+.+.++ ++++|.||-+.+.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~--g~~v~vid~~~~~~~~~~~~~--~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGE--NNDVTVIDTDEERLRRLQDRL--DVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhhc--CEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 47999995 99999999999987 789999999999887765432 478899999999988888 7899999988753
Q ss_pred CCCCchHHHHHHHHHc-CCcEE
Q 014177 119 FQQAPKCTVLEAAIET-KTAYI 139 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~-gv~~v 139 (429)
.. .+..+...|.+. +..++
T Consensus 76 ~~--~n~~~~~~~r~~~~~~~i 95 (453)
T PRK09496 76 DE--TNMVACQIAKSLFGAPTT 95 (453)
T ss_pred hH--HHHHHHHHHHHhcCCCeE
Confidence 22 123445666665 65554
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0013 Score=64.85 Aligned_cols=96 Identities=22% Similarity=0.289 Sum_probs=61.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCce---EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~---v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+.++|.|+||+|++|+.+++.|.+ ++.++ +.++.......+.+ .+... +...-++ |.+. ++++|+||.
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~-h~~f~v~~l~~~aS~~saGk~~--~~~~~-~l~v~~~-~~~~----~~~~Divf~ 74 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEK-ETKFNIAEVTLLSSKRSAGKTV--QFKGR-EIIIQEA-KINS----FEGVDIAFF 74 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHH-CCCCCcccEEEEECcccCCCCe--eeCCc-ceEEEeC-CHHH----hcCCCEEEE
Confidence 346899999999999999999986 35666 54444332222222 11111 2222233 3332 368999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+++.-. ...+...+.+.|+..||.+++.
T Consensus 75 a~~~~~---s~~~~~~~~~~G~~VID~Ss~f 102 (347)
T PRK06728 75 SAGGEV---SRQFVNQAVSSGAIVIDNTSEY 102 (347)
T ss_pred CCChHH---HHHHHHHHHHCCCEEEECchhh
Confidence 875432 2577777888999999998764
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0025 Score=63.23 Aligned_cols=98 Identities=22% Similarity=0.183 Sum_probs=61.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC--------CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG--------KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~--------~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
++|.|+|++|++|+.+++.|.++ +.++++.+ +++....+.+.+..+ ....-..+.-.+.+ .+.++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHH----HhccCC
Confidence 47999999999999999988874 56788776 443332222221111 00111111111222 246899
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+|+.|++.... ..+.+.+.+.|++.||.+++.
T Consensus 76 vVf~a~p~~~s---~~~~~~~~~~G~~VIDlsg~f 107 (341)
T TIGR00978 76 IVFSALPSEVA---EEVEPKLAEAGKPVFSNASNH 107 (341)
T ss_pred EEEEeCCHHHH---HHHHHHHHHCCCEEEECChhh
Confidence 99988754322 566788889999999999773
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.001 Score=63.36 Aligned_cols=107 Identities=16% Similarity=0.179 Sum_probs=65.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCcEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNSEF 91 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v~~ 91 (429)
.+.++.++|+|+|+ |.+|+++++.|+..+- -+++++|.+.- |.+.+++. +.+.+++
T Consensus 25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V 102 (268)
T PRK15116 25 LQLFADAHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV 102 (268)
T ss_pred HHHhcCCCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEE
Confidence 45578899999995 6699999999999742 37888886522 11122222 2223333
Q ss_pred EEe-eCCChHHHHHHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 92 AEV-NIYNEGSLLMALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 92 ~~~-Dl~d~~~l~~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
... +..+.+.+.+++. ++|+||.|.+.... ...+.+.|.+.++++|...+.
T Consensus 103 ~~i~~~i~~e~~~~ll~~~~D~VIdaiD~~~~--k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 103 TVVDDFITPDNVAEYMSAGFSYVIDAIDSVRP--KAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred EEEecccChhhHHHHhcCCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEECCc
Confidence 222 2223444555554 68888888765332 245677777777777765543
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0013 Score=56.60 Aligned_cols=98 Identities=23% Similarity=0.259 Sum_probs=66.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc-------------------hhHHHHHHH---hCCCcE--EEEee
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR-------------------EKGAAMVST---LGKNSE--FAEVN 95 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~-------------------~~~~~l~~~---l~~~v~--~~~~D 95 (429)
+|+|+|+ |.+|+.+++.|... |. +++++|.+. .|.+.+++. +.+.++ ....+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~--Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~ 77 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARS--GVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEG 77 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHC--CCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeee
Confidence 5899995 77999999999997 44 788887552 122222222 223333 34444
Q ss_pred CCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 96 IYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 96 l~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+.+. ...+.++++|+||.|...... ...+.+.|.+.++++++....
T Consensus 78 ~~~~-~~~~~~~~~diVi~~~d~~~~--~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 78 ISED-NLDDFLDGVDLVIDAIDNIAV--RRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred cChh-hHHHHhcCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEcCC
Confidence 4433 245678899999999875432 356788999999999987754
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00067 Score=63.36 Aligned_cols=106 Identities=24% Similarity=0.196 Sum_probs=66.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCc--
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNS-- 89 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v-- 89 (429)
++.++.++|+|+|. |.+|+++++.|+..+- -+++++|.+.- |.+.+++. +.+.+
T Consensus 6 ~~~L~~~~VlVvG~-GGvGs~va~~Lar~GV-g~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V 83 (231)
T cd00755 6 LEKLRNAHVAVVGL-GGVGSWAAEALARSGV-GKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEV 83 (231)
T ss_pred HHHHhCCCEEEECC-CHHHHHHHHHHHHcCC-CEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEE
Confidence 45578899999995 6699999999999743 28888886532 22222222 22233
Q ss_pred EEEEeeCCChHHHHHHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 90 EFAEVNIYNEGSLLMALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+.+...++ .+.+.+++. ++|+||.|...... ...+.+.|.+.++++|...+.
T Consensus 84 ~~~~~~i~-~~~~~~l~~~~~D~VvdaiD~~~~--k~~L~~~c~~~~ip~I~s~g~ 136 (231)
T cd00755 84 DAVEEFLT-PDNSEDLLGGDPDFVVDAIDSIRA--KVALIAYCRKRKIPVISSMGA 136 (231)
T ss_pred EEeeeecC-HhHHHHHhcCCCCEEEEcCCCHHH--HHHHHHHHHHhCCCEEEEeCC
Confidence 33333333 234555553 68899888764332 256778888888888866543
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=54.45 Aligned_cols=84 Identities=23% Similarity=0.236 Sum_probs=63.6
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGPFQ 120 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp~~ 120 (429)
|+|+| +|.+|+.+++.|.+. +.+|+++++++++.+.+.+. .+.++.+|.+|.+.++++ +++++.||-+.+--
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~--~~~vvvid~d~~~~~~~~~~---~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d- 73 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEG--GIDVVVIDRDPERVEELREE---GVEVIYGDATDPEVLERAGIEKADAVVILTDDD- 73 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHT--TSEEEEEESSHHHHHHHHHT---TSEEEES-TTSHHHHHHTTGGCESEEEEESSSH-
T ss_pred eEEEc-CCHHHHHHHHHHHhC--CCEEEEEECCcHHHHHHHhc---ccccccccchhhhHHhhcCccccCEEEEccCCH-
Confidence 68898 588999999999995 67999999999988877653 478999999999988875 45899998776521
Q ss_pred CCchHHHHHHHHH
Q 014177 121 QAPKCTVLEAAIE 133 (429)
Q Consensus 121 ~~~~~~v~~aa~~ 133 (429)
..+..+...+.+
T Consensus 74 -~~n~~~~~~~r~ 85 (116)
T PF02254_consen 74 -EENLLIALLARE 85 (116)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH
Confidence 122444555555
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00034 Score=71.03 Aligned_cols=75 Identities=20% Similarity=0.319 Sum_probs=59.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++|+|+|+ |.+|+.+++.|.+.+ -.++++++|+.++++.+++.++. .. +...+++.+.+.++|+||+|
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g-~~~I~V~nRt~~ra~~La~~~~~-~~-----~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALA-PKQIMLANRTIEKAQKITSAFRN-AS-----AHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHhcC-Ce-----EecHHHHHHHhccCCEEEEC
Confidence 467799999995 779999999999873 24899999999999999887642 11 22335567788899999999
Q ss_pred CCC
Q 014177 116 AGP 118 (429)
Q Consensus 116 agp 118 (429)
.+.
T Consensus 250 T~a 252 (414)
T PRK13940 250 VNV 252 (414)
T ss_pred cCC
Confidence 864
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00091 Score=61.40 Aligned_cols=134 Identities=21% Similarity=0.175 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++|+|+|| |.+|..-++.|++. |.+|++++.+.. .++.+.+. .+++++..+... ..++++|+||-+
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~--ga~VtVvsp~~~~~l~~l~~~--~~i~~~~~~~~~-----~dl~~~~lVi~a 76 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKA--GAQLRVIAEELESELTLLAEQ--GGITWLARCFDA-----DILEGAFLVIAA 76 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHC--CCEEEEEcCCCCHHHHHHHHc--CCEEEEeCCCCH-----HHhCCcEEEEEC
Confidence 67789999995 88999999999997 789999887654 33444332 367888777653 235789999977
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE-EecCCCccchhHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA-ITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~-i~~~g~~pG~s~~~a~~~~~ 185 (429)
.+.... +..+.+.|.+.|+.+- ..++.+...- .+....+..++.+ +...|.+|.+++.+-+.+.+
T Consensus 77 t~d~~l--n~~i~~~a~~~~ilvn-~~d~~e~~~f--~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~ 142 (205)
T TIGR01470 77 TDDEEL--NRRVAHAARARGVPVN-VVDDPELCSF--IFPSIVDRSPVVVAISSGGAAPVLARLLRERIET 142 (205)
T ss_pred CCCHHH--HHHHHHHHHHcCCEEE-ECCCcccCeE--EEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 654211 2688889988886652 2323221110 0111111223333 34456778887776666554
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00086 Score=66.56 Aligned_cols=103 Identities=16% Similarity=0.111 Sum_probs=63.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----------------------hhHHHHHHHh---CCC
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----------------------EKGAAMVSTL---GKN 88 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----------------------~~~~~l~~~l---~~~ 88 (429)
++.++.++|+|+|+ |.+|+.++..|++.+- -+++++|.+. .|.+.+++.+ ..+
T Consensus 171 q~kL~~~~VaIVG~-GG~GS~Va~~LAR~GV-geI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~in~~ 248 (393)
T PRK06153 171 SAKLEGQRIAIIGL-GGTGSYILDLVAKTPV-REIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNMRRG 248 (393)
T ss_pred HHHHhhCcEEEEcC-CccHHHHHHHHHHcCC-CEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHhCCe
Confidence 44567889999996 5599999999999742 3888887541 1222222222 123
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+..+...+ +.+.+. .+.++|+||.|..-... -.-+.+.|.+.++++||++
T Consensus 249 I~~~~~~I-~~~n~~-~L~~~DiV~dcvDn~~a--R~~ln~~a~~~gIP~Id~G 298 (393)
T PRK06153 249 IVPHPEYI-DEDNVD-ELDGFTFVFVCVDKGSS--RKLIVDYLEALGIPFIDVG 298 (393)
T ss_pred EEEEeecC-CHHHHH-HhcCCCEEEEcCCCHHH--HHHHHHHHHHcCCCEEEee
Confidence 44444444 444443 45778888888764322 2345667777777777765
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.001 Score=60.78 Aligned_cols=108 Identities=19% Similarity=0.265 Sum_probs=70.0
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch---------------------hHHHHHH---HhCC
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE---------------------KGAAMVS---TLGK 87 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~---------------------~~~~l~~---~l~~ 87 (429)
..++.++.++|+|+|++| +|+.+++.|+..+. -+++++|.+.- |.+..++ ++.+
T Consensus 12 ~~q~~L~~s~VlviG~gg-lGsevak~L~~~GV-g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp 89 (198)
T cd01485 12 EAQNKLRSAKVLIIGAGA-LGAEIAKNLVLAGI-DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP 89 (198)
T ss_pred HHHHHHhhCcEEEECCCH-HHHHHHHHHHHcCC-CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC
Confidence 345567889999999755 99999999999743 26888875421 1111122 2233
Q ss_pred CcEE--EEeeCCC-hHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 88 NSEF--AEVNIYN-EGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 88 ~v~~--~~~Dl~d-~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+++ +..++.+ .+...++++++|+||.|..+... ...+-+.|.+.+++++..+.
T Consensus 90 ~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~--~~~ln~~c~~~~ip~i~~~~ 146 (198)
T cd01485 90 NVKLSIVEEDSLSNDSNIEEYLQKFTLVIATEENYER--TAKVNDVCRKHHIPFISCAT 146 (198)
T ss_pred CCEEEEEecccccchhhHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEEe
Confidence 3433 3334432 34456678899999988765322 24567889999999987653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0012 Score=66.19 Aligned_cols=105 Identities=25% Similarity=0.229 Sum_probs=71.1
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~l---~~~-- 88 (429)
.++.++..+|+|+|+ |.+|+.+++.|+..+. -+++++|.+.- |.+.+++.+ .+.
T Consensus 35 ~q~~l~~~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~ 112 (370)
T PRK05600 35 QQERLHNARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIR 112 (370)
T ss_pred HHHHhcCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCe
Confidence 455677899999996 6699999999999742 38888886521 233333322 233
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.+...++ .+.+.++++++|+||.|...+.. ..-+-+.|.+.++++|..+
T Consensus 113 i~~~~~~i~-~~~~~~~~~~~DlVid~~Dn~~~--r~~in~~~~~~~iP~v~~~ 163 (370)
T PRK05600 113 VNALRERLT-AENAVELLNGVDLVLDGSDSFAT--KFLVADAAEITGTPLVWGT 163 (370)
T ss_pred eEEeeeecC-HHHHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 344444454 34577788999999999875432 1445678999999988543
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0017 Score=61.28 Aligned_cols=104 Identities=18% Similarity=0.182 Sum_probs=69.6
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCc-
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNS- 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v- 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+- -+++++|.+.- |.+.+++. +.+.+
T Consensus 26 ~Q~~L~~~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~ 103 (245)
T PRK05690 26 GQEKLKAARVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIA 103 (245)
T ss_pred HHHHhcCCeEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCE
Confidence 356678899999996 7799999999999743 27888875432 22222222 22333
Q ss_pred -EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 90 -EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 90 -~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
+.....++ .+.+.++++++|+||.|...+.. ...+-+.|.+.++++|..
T Consensus 104 i~~~~~~i~-~~~~~~~~~~~DiVi~~~D~~~~--r~~ln~~~~~~~ip~v~~ 153 (245)
T PRK05690 104 IETINARLD-DDELAALIAGHDLVLDCTDNVAT--RNQLNRACFAAKKPLVSG 153 (245)
T ss_pred EEEEeccCC-HHHHHHHHhcCCEEEecCCCHHH--HHHHHHHHHHhCCEEEEe
Confidence 33444443 34567788899999999865432 245677889999988864
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=59.93 Aligned_cols=105 Identities=16% Similarity=0.129 Sum_probs=67.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCCc-
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKNS- 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~v- 89 (429)
.++.++.++|+|+|++| +|+.+++.|+..+- -+++++|.+.- |.+.+++ ++.+.+
T Consensus 15 ~Q~~L~~s~VlIiG~gg-lG~evak~La~~GV-g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~ 92 (197)
T cd01492 15 AQKRLRSARILLIGLKG-LGAEIAKNLVLSGI-GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVK 92 (197)
T ss_pred HHHHHHhCcEEEEcCCH-HHHHHHHHHHHcCC-CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCE
Confidence 34567889999999655 99999999999742 27888875421 2222222 233333
Q ss_pred -EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 90 -EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 90 -~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
+.....+.+ ...+.++++|+||.|...... ...+-+.|.+.+++++....
T Consensus 93 i~~~~~~~~~--~~~~~~~~~dvVi~~~~~~~~--~~~ln~~c~~~~ip~i~~~~ 143 (197)
T cd01492 93 VSVDTDDISE--KPEEFFSQFDVVVATELSRAE--LVKINELCRKLGVKFYATGV 143 (197)
T ss_pred EEEEecCccc--cHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEEe
Confidence 333333332 245567899999988764322 25667889999999886553
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0015 Score=66.72 Aligned_cols=97 Identities=24% Similarity=0.361 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++|+|+|+ |.+|+.+++.|... |. +|++++|+.++++.+++.++. . +.+.+++.+.+.++|+||.|
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~--G~~~V~v~~r~~~ra~~la~~~g~--~-----~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEK--GVRKITVANRTLERAEELAEEFGG--E-----AIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCC--c-----EeeHHHHHHHhccCCEEEEC
Confidence 56789999995 99999999999876 55 899999999998888877642 1 22234566777899999999
Q ss_pred CCCCCCCchHHHHHHHHHc----CCcEEEeCC
Q 014177 116 AGPFQQAPKCTVLEAAIET----KTAYIDVCD 143 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~----gv~~vdis~ 143 (429)
.+.....-+...++.+... ..-.+|++.
T Consensus 250 T~s~~~~i~~~~l~~~~~~~~~~~~vviDla~ 281 (423)
T PRK00045 250 TGAPHPIIGKGMVERALKARRHRPLLLVDLAV 281 (423)
T ss_pred CCCCCcEEcHHHHHHHHhhccCCCeEEEEeCC
Confidence 8643221113334444321 123567764
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0019 Score=67.28 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+..++|+|+|+ |.+|+.+++.|... |. +|++++|+.++++.+.+.++ .......+ .+++.+.+.++|+||.|
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~--G~~~V~V~nRs~era~~La~~~~-g~~i~~~~---~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSK--GCTKMVVVNRSEERVAALREEFP-DVEIIYKP---LDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHhC-CCceEeec---HhhHHHHHhcCCEEEEc
Confidence 67899999996 99999999999986 54 79999999999999887764 22222223 34456778899999999
Q ss_pred CCCCCCCchHHHHHHHHHc----CC--cEEEeCCC
Q 014177 116 AGPFQQAPKCTVLEAAIET----KT--AYIDVCDD 144 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~----gv--~~vdis~~ 144 (429)
.+-....-....++.+... +. -.||++-.
T Consensus 337 T~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 337 TSSETPLFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred cCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 7532221113455554322 11 34677643
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0016 Score=71.69 Aligned_cols=106 Identities=20% Similarity=0.217 Sum_probs=72.4
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHH---HHhCCCcEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMV---STLGKNSEF 91 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~---~~l~~~v~~ 91 (429)
++.++..+|+|+|+ |.+|+.+++.|+..+-| +++++|.+.- |.+..+ .++++.+++
T Consensus 327 Q~kL~~srVlVvGl-GGlGs~ia~~LAraGVG-~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I 404 (989)
T PRK14852 327 QRRLLRSRVAIAGL-GGVGGIHLMTLARTGIG-NFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDI 404 (989)
T ss_pred HHHHhcCcEEEECC-cHHHHHHHHHHHHcCCC-eEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeE
Confidence 55678899999995 55999999999998543 7888775321 222222 233344444
Q ss_pred --EEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 92 --AEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 92 --~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+...+ +.+.+.++++++|+||.|...+.......+.+.|.+.+++.|..+
T Consensus 405 ~~~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~ag 456 (989)
T PRK14852 405 RSFPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITAG 456 (989)
T ss_pred EEEecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEee
Confidence 33344 446688899999999999865432112467788999999998654
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0013 Score=70.68 Aligned_cols=107 Identities=21% Similarity=0.194 Sum_probs=72.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCC--C
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGK--N 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~--~ 88 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+-| +++++|.+.- |.+.+++ ++++ +
T Consensus 37 ~Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG-~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~ 114 (679)
T PRK14851 37 EQERLAEAKVAIPGM-GGVGGVHLITMVRTGIG-RFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE 114 (679)
T ss_pred HHHHHhcCeEEEECc-CHHHHHHHHHHHHhCCC-eEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe
Confidence 355678899999995 66999999999998433 7888774321 2222222 2223 3
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++.+...++ .+.+.++++++|+||+|...+.......+.+.|.+.++++|..+
T Consensus 115 I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~g 167 (679)
T PRK14851 115 ITPFPAGIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITAG 167 (679)
T ss_pred EEEEecCCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEee
Confidence 445555664 45678889999999999865432111457889999999998654
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00084 Score=62.77 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=54.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC--hHHHHHHhcCccE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN--EGSLLMALRDVDL 111 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d--~~~l~~~~~~~Dv 111 (429)
.|.+.+-|.+=-.++|++|+++++.|+++ |++|++++|+..... ....+++++.++..+ .+.+.+.++++|+
T Consensus 11 ~e~iD~VR~itN~SSG~iG~aLA~~L~~~--G~~V~li~r~~~~~~----~~~~~v~~i~v~s~~~m~~~l~~~~~~~Di 84 (229)
T PRK06732 11 TEPIDSVRGITNHSTGQLGKIIAETFLAA--GHEVTLVTTKTAVKP----EPHPNLSIIEIENVDDLLETLEPLVKDHDV 84 (229)
T ss_pred ccccCCceeecCccchHHHHHHHHHHHhC--CCEEEEEECcccccC----CCCCCeEEEEEecHHHHHHHHHHHhcCCCE
Confidence 34455555555568999999999999998 899999887643210 001245666654332 2456666778999
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
||||||...
T Consensus 85 vIh~AAvsd 93 (229)
T PRK06732 85 LIHSMAVSD 93 (229)
T ss_pred EEeCCccCC
Confidence 999998753
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0018 Score=60.57 Aligned_cols=105 Identities=18% Similarity=0.193 Sum_probs=63.7
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH-----------------------HHhCCCc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV-----------------------STLGKNS 89 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~-----------------------~~l~~~v 89 (429)
.++.++.++|+|+|+ |.+|+.+++.|+..+. -+++++|.+.-...++. +++.+.+
T Consensus 21 ~q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gv-g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v 98 (231)
T PRK08328 21 GQEKLKKAKVAVVGV-GGLGSPVAYYLAAAGV-GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDI 98 (231)
T ss_pred HHHHHhCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCC
Confidence 456678899999996 6699999999999743 27888886532222221 1122222
Q ss_pred --EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 90 --EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 90 --~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+.....+ +.+.+.++++++|+||.|...+.. ...+-+.|.+.+++.|.-+
T Consensus 99 ~v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~~--r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 99 KIETFVGRL-SEENIDEVLKGVDVIVDCLDNFET--RYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred EEEEEeccC-CHHHHHHHHhcCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEe
Confidence 2223333 234456667778888877654321 1344556777777777543
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0021 Score=61.64 Aligned_cols=124 Identities=22% Similarity=0.209 Sum_probs=77.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.++++|+|+ |..+++++..|.+. +. +|++++|+.++++.+++.+. . +.. +.+. ..++|+||||..
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~--g~~~i~i~nR~~~~a~~la~~~~--~-----~~~--~~~~--~~~~dlvINaTp 187 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDA--GFTDGTIVARNEKTGKALAELYG--Y-----EWR--PDLG--GIEADILVNVTP 187 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhC--C-----cch--hhcc--cccCCEEEECCc
Confidence 368999996 66999999999987 54 79999999999998887653 1 111 1111 246899999973
Q ss_pred C--CCCC--chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 118 P--FQQA--PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 118 p--~~~~--~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
. .... ...++-...+..+.-.+|+...+ ...++-..+++.|..++.| -.++..+.+..+
T Consensus 188 ~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P----~~T~ll~~A~~~G~~~i~G-------l~MLi~Qa~~~f 250 (272)
T PRK12550 188 IGMAGGPEADKLAFPEAEIDAASVVFDVVALP----AETPLIRYARARGKTVITG-------AEVIALQAVEQF 250 (272)
T ss_pred cccCCCCccccCCCCHHHcCCCCEEEEeecCC----ccCHHHHHHHHCcCeEeCC-------HHHHHHHHHHHH
Confidence 2 1110 00123223344444556776544 2235667788888876544 245566666544
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00082 Score=56.21 Aligned_cols=97 Identities=22% Similarity=0.234 Sum_probs=60.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcE-EEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSE-FAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~-~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++.|+|++|.+|..+++.|.+. +++++..+ +++.++.+.+.... +++. ....++. .+.+. ..++|+||-|.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~~l~av~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~--~~~~DvV~~~~~~ 75 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDFEVVALAASARSAGKRVSEAG-PHLKGEVVLELE-PEDFE--ELAVDIVFLALPH 75 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCceEEEEEechhhcCcCHHHHC-cccccccccccc-cCChh--hcCCCEEEEcCCc
Confidence 5889999999999999999884 57777766 55544444333322 2221 1122222 12232 2489999999875
Q ss_pred CCCCchHHH---HHHHHHcCCcEEEeCCCh
Q 014177 119 FQQAPKCTV---LEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 119 ~~~~~~~~v---~~aa~~~gv~~vdis~~~ 145 (429)
... ..+ +..+.+.|...||+++..
T Consensus 76 ~~~---~~~~~~~~~~~~~g~~viD~s~~~ 102 (122)
T smart00859 76 GVS---KEIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred HHH---HHHHHHHHhhhcCCCEEEECCccc
Confidence 432 232 234457888999998754
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0021 Score=57.45 Aligned_cols=95 Identities=20% Similarity=0.250 Sum_probs=58.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc------------------hhHHHHHHH---hCCC--cEEEEeeC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR------------------EKGAAMVST---LGKN--SEFAEVNI 96 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~------------------~~~~~l~~~---l~~~--v~~~~~Dl 96 (429)
+|+|+|+ |.+|+.+++.|+.. |. +++++|.+. .|.+...+. +.+. ++.....+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~--Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~ 77 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARS--GVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI 77 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHc--CCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec
Confidence 5899995 66999999999997 55 699998765 122222222 2222 33333444
Q ss_pred CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHc-CCcEEEe
Q 014177 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIET-KTAYIDV 141 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~-gv~~vdi 141 (429)
+. +.+.++++++|+||.|...... ...+.+.|.+. ++++|.-
T Consensus 78 ~~-~~~~~~l~~~DlVi~~~d~~~~--r~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 78 DE-NNLEGLFGDCDIVVEAFDNAET--KAMLAESLLGNKNKPVVCA 120 (174)
T ss_pred Ch-hhHHHHhcCCCEEEECCCCHHH--HHHHHHHHHHHCCCCEEEE
Confidence 33 4566778888888888643321 12355666665 7776643
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0027 Score=65.41 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=73.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ 115 (429)
..+++++|+|+ |.+|+.+++.|.+. +++++++++++++.+.+.+.. ..+..+.+|.++.+.+.++ ++++|.||-+
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~--~~~v~vid~~~~~~~~~~~~~-~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKE--GYSVKLIERDPERAEELAEEL-PNTLVLHGDGTDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHC-CCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence 45689999995 99999999999986 789999999999888776654 2467899999999888654 5689999977
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
.+-. ..+..+...|.+.+...+
T Consensus 305 ~~~~--~~n~~~~~~~~~~~~~~i 326 (453)
T PRK09496 305 TNDD--EANILSSLLAKRLGAKKV 326 (453)
T ss_pred CCCc--HHHHHHHHHHHHhCCCeE
Confidence 6422 112334445666776654
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0027 Score=58.12 Aligned_cols=134 Identities=22% Similarity=0.285 Sum_probs=78.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.+++|+|+|| |-+|...++.|++. +.+|++++++.. .+..+... ..+.+..-++. ...+.++|+||-
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~--ga~V~VIs~~~~~~l~~l~~~--~~i~~~~~~~~-----~~~l~~adlVia 76 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKY--GAHIVVISPELTENLVKLVEE--GKIRWKQKEFE-----PSDIVDAFLVIA 76 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEcCCCCHHHHHHHhC--CCEEEEecCCC-----hhhcCCceEEEE
Confidence 467899999996 88999999999997 789999887542 23333322 23555443332 223678999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE-EecCCCccchhHHHHHHHHH
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA-ITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~-i~~~g~~pG~s~~~a~~~~~ 185 (429)
+.+.... +..+.+.| +.++ .+...++.....-. +....+..++.+ +...|.+|.+++.+-+.+-.
T Consensus 77 aT~d~el--N~~i~~~a-~~~~-lvn~~d~~~~~~f~--~Pa~~~~g~l~iaIsT~G~sP~la~~lr~~ie~ 142 (202)
T PRK06718 77 ATNDPRV--NEQVKEDL-PENA-LFNVITDAESGNVV--FPSALHRGKLTISVSTDGASPKLAKKIRDELEA 142 (202)
T ss_pred cCCCHHH--HHHHHHHH-HhCC-cEEECCCCccCeEE--EeeEEEcCCeEEEEECCCCChHHHHHHHHHHHH
Confidence 8653221 25677777 4554 45555444321100 111111223333 33456678777766555554
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00024 Score=65.32 Aligned_cols=147 Identities=13% Similarity=0.085 Sum_probs=98.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-----hHHHHHHH----hCCCcEEEEeeCCChHHHHHHhc--
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-----KGAAMVST----LGKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-----~~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.|..||+|-+|.=|+.+++.|+.. |++|...-|+.. +.+.+... .+.......+|++|...|.+++.
T Consensus 28 rkvALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 356899999999999999999997 899987776544 33333211 11357788999999999988887
Q ss_pred CccEEEecCCCCCC---------------CchHHHHHHHHHc----CCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 108 DVDLVVHAAGPFQQ---------------APKCTVLEAAIET----KTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 108 ~~DvVi~~agp~~~---------------~~~~~v~~aa~~~----gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
+++-|+|+|+..+. .|++++++|.... ++++...+++. .+....+... ..-.+..+-
T Consensus 106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE-lyGkv~e~PQ---sE~TPFyPR 181 (376)
T KOG1372|consen 106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE-LYGKVQEIPQ---SETTPFYPR 181 (376)
T ss_pred CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHh-hcccccCCCc---ccCCCCCCC
Confidence 78889999976542 3678888876554 45566555443 3332222211 112344443
Q ss_pred CCCccchhHHHHHHHHHHHHhhcCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
+.|+++|+.+.|++-.|++.++.
T Consensus 182 --SPYa~aKmy~~WivvNyREAYnm 204 (376)
T KOG1372|consen 182 --SPYAAAKMYGYWIVVNYREAYNM 204 (376)
T ss_pred --ChhHHhhhhheEEEEEhHHhhcc
Confidence 44888999888887766655543
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0012 Score=71.13 Aligned_cols=105 Identities=19% Similarity=0.143 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch------------------hHHHHHHH---hCCC--cE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE------------------KGAAMVST---LGKN--SE 90 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~------------------~~~~l~~~---l~~~--v~ 90 (429)
++.++.++|+|+|+ | +|+.++..|+..+-.-+++++|.+.- |.+..++. +++. ++
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 55678899999998 8 99999999998731028888886421 22222222 2233 44
Q ss_pred EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 91 FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 91 ~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+...++ .+.+.++++++|+||.|..-+.. -.-+-++|.+.+++.|.-++
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~--R~~ln~~a~~~~iP~i~~~~ 229 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLDV--KVLLREAARARRIPVLMATS 229 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEcC
Confidence 5555555 56788999999999999875532 25667899999999886553
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0015 Score=61.35 Aligned_cols=127 Identities=14% Similarity=0.010 Sum_probs=75.7
Q ss_pred HHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----CccEEEecCCCCCC---------
Q 014177 55 TAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----DVDLVVHAAGPFQQ--------- 121 (429)
Q Consensus 55 l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----~~DvVi~~agp~~~--------- 121 (429)
+++.|+++ |++|++++|+.++.+ ...++++|++|.++++++++ ++|+|||+||....
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~~~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~v 70 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPGMT--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARV 70 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcchhh--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhh
Confidence 46788887 899999999877642 13467899999999988876 58999999986421
Q ss_pred --CchHHHHHHHHHc---CCcEEEeCCChhHHHH-HHhhHHH-HH----HcC---CcEEecCC-CccchhHHHHHHHHHH
Q 014177 122 --APKCTVLEAAIET---KTAYIDVCDDTIYSQR-AKSFKDR-AI----AAN---IPAITTGG-IYPGVSNVMAAELVRV 186 (429)
Q Consensus 122 --~~~~~v~~aa~~~---gv~~vdis~~~~~~~~-~~~~~~~-a~----~~g---~~~i~~~g-~~pG~s~~~a~~~~~~ 186 (429)
.+...+.+++... +.+.|.+++...+... .....+. .. ..+ ....+..+ ..|+.||.....+.+.
T Consensus 71 N~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (241)
T PRK12428 71 NFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150 (241)
T ss_pred chHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence 2344566666543 3355666654433100 0000000 00 000 00001112 3499999999888887
Q ss_pred HH-hhc
Q 014177 187 AR-NES 191 (429)
Q Consensus 187 ~~-~~~ 191 (429)
+. .++
T Consensus 151 la~~e~ 156 (241)
T PRK12428 151 QAQPWF 156 (241)
T ss_pred HHHHhh
Confidence 76 444
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0042 Score=61.82 Aligned_cols=96 Identities=19% Similarity=0.237 Sum_probs=60.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce---EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~---v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|++|.|+||+|++|+.+.+.|+++ ++++ +.....+.. .... ..+.+ -.....++.|.+. ++++|+||.+
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~-~~f~~~~l~~~ss~~s-g~~~-~~f~g-~~~~v~~~~~~~~----~~~~Divf~a 72 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEE-NDFDLIEPVFFSTSQA-GGAA-PSFGG-KEGTLQDAFDIDA----LKKLDIIITC 72 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhC-CCCCcCcEEEecchhh-CCcc-cccCC-CcceEEecCChhH----hcCCCEEEEC
Confidence 368999999999999999977663 5666 665443211 1111 11212 1234455554433 3689999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCc--EEEeCCCh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTA--YIDVCDDT 145 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~--~vdis~~~ 145 (429)
++... ...+...+.++|++ .||.+++-
T Consensus 73 ~~~~~---s~~~~~~~~~aG~~~~VID~Ss~f 101 (369)
T PRK06598 73 QGGDY---TNEVYPKLRAAGWQGYWIDAASTL 101 (369)
T ss_pred CCHHH---HHHHHHHHHhCCCCeEEEECChHH
Confidence 86432 25677778889965 78888654
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0018 Score=64.18 Aligned_cols=101 Identities=23% Similarity=0.189 Sum_probs=66.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCC--------cE-EEEeeCCChHHHHHHhcC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKN--------SE-FAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~--------v~-~~~~Dl~d~~~l~~~~~~ 108 (429)
|.||.|.|. |.+|+.+++.+.++ ++++++.+ +++++....++...+-. .+ +...++.-.....+++.+
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~-~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~ 78 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQ-PDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEK 78 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcC-CCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhcc
Confidence 468999996 99999999998874 78887765 44554445444432100 00 000001001124455678
Q ss_pred ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 109 VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 109 ~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+|+||.|++++.. ...++.++++|++.|+-++.
T Consensus 79 vDVVIdaT~~~~~---~e~a~~~~~aGk~VI~~~~~ 111 (341)
T PRK04207 79 ADIVVDATPGGVG---AKNKELYEKAGVKAIFQGGE 111 (341)
T ss_pred CCEEEECCCchhh---HHHHHHHHHCCCEEEEcCCC
Confidence 9999999987654 67888999999888877764
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.004 Score=58.05 Aligned_cols=111 Identities=16% Similarity=0.243 Sum_probs=68.8
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc---eEEEEecC----chhH-------HHHHHHhCCCcEEEEeeCCChH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL---QIVVGSRN----REKG-------AAMVSTLGKNSEFAEVNIYNEG 100 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~---~v~v~~R~----~~~~-------~~l~~~l~~~v~~~~~Dl~d~~ 100 (429)
.++.+++|+|+|+ |..|+.+++.|.+. |. ++.++||+ .++. +.+.+.... . ..+ .
T Consensus 21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~--G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~--~--~~~----~ 89 (226)
T cd05311 21 KKIEEVKIVINGA-GAAGIAIARLLLAA--GAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNP--E--KTG----G 89 (226)
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHHc--CcCcceEEEEeCCCccccccchhhhHHHHHHHHHhcc--C--ccc----C
Confidence 3577789999996 77999999999886 55 69999998 4443 223332211 0 111 1
Q ss_pred HHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc
Q 014177 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP 164 (429)
Q Consensus 101 ~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~ 164 (429)
++.+.++++|+|||+.++... . ...++...+..+. +|++ .+. ...+.+.+++.|..
T Consensus 90 ~l~~~l~~~dvlIgaT~~G~~-~-~~~l~~m~~~~iv-f~ls-nP~----~e~~~~~A~~~ga~ 145 (226)
T cd05311 90 TLKEALKGADVFIGVSRPGVV-K-KEMIKKMAKDPIV-FALA-NPV----PEIWPEEAKEAGAD 145 (226)
T ss_pred CHHHHHhcCCEEEeCCCCCCC-C-HHHHHhhCCCCEE-EEeC-CCC----CcCCHHHHHHcCCc
Confidence 355566789999999874332 2 3445544333333 3665 332 23566777777775
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0012 Score=61.16 Aligned_cols=74 Identities=30% Similarity=0.361 Sum_probs=52.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|+|.|+||+|.+|+.++..|.+. +++|++.+|++++.+.+.+.... .+.. ..-..+ ..+.++++|+||-
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~--G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~-~~~~~~---~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA--GNKIIIGSRDLEKAEEAAAKALEELGHGGSDI-KVTGAD---NAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCEEEEEEcCHHHHHHHHHHHHhhccccCCCc-eEEEeC---hHHHHhcCCEEEE
Confidence 47999998999999999999987 78999999999888776653211 1100 011112 2345678999998
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++.+.
T Consensus 75 avp~~ 79 (219)
T TIGR01915 75 AVPWD 79 (219)
T ss_pred ECCHH
Confidence 87653
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0013 Score=64.75 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=49.3
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCC-----CceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCCh-----------HHH
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCP-----DLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNE-----------GSL 102 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~-----g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~-----------~~l 102 (429)
+|.|+||+|.||+.++..|..++- ..++++.|++. ++++. ...|+.|. ...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g-----------~~~Dl~d~~~~~~~~~~i~~~~ 70 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG-----------VVMELQDCAFPLLKGVVITTDP 70 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce-----------eeeehhhhcccccCCcEEecCh
Confidence 799999999999999999987521 22599999987 44332 22333332 234
Q ss_pred HHHhcCccEEEecCCCCC
Q 014177 103 LMALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 103 ~~~~~~~DvVi~~agp~~ 120 (429)
.+.++++|+||++||...
T Consensus 71 ~~~~~~aDiVVitAG~~~ 88 (323)
T cd00704 71 EEAFKDVDVAILVGAFPR 88 (323)
T ss_pred HHHhCCCCEEEEeCCCCC
Confidence 577889999999998644
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0037 Score=63.84 Aligned_cols=97 Identities=22% Similarity=0.326 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++|+|+|+ |.+|..+++.|... | .+|++.+|+.++++.+++.++. ..+ + .+++.+.+.++|+||.|
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~--G~~~V~v~~rs~~ra~~la~~~g~--~~i--~---~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRK--GVGKILIANRTYERAEDLAKELGG--EAV--K---FEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCC--eEe--e---HHHHHHHHhhCCEEEEC
Confidence 66789999995 99999999999886 5 6899999999988888776642 222 2 24567778899999999
Q ss_pred CCCCCCCchHHHHHHHHHcC-C--cEEEeCC
Q 014177 116 AGPFQQAPKCTVLEAAIETK-T--AYIDVCD 143 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~g-v--~~vdis~ 143 (429)
.+.....-+...++.+...+ . -.+|++.
T Consensus 248 T~s~~~ii~~e~l~~~~~~~~~~~~viDla~ 278 (417)
T TIGR01035 248 TGAPHPIVSKEDVERALRERTRPLFIIDIAV 278 (417)
T ss_pred CCCCCceEcHHHHHHHHhcCCCCeEEEEeCC
Confidence 86332211134455544322 2 3467764
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.003 Score=55.24 Aligned_cols=70 Identities=31% Similarity=0.420 Sum_probs=47.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+|+++|+| +|.+|+.+++.|... |.+|++.+.++-++-+ ... +.++.. .++++++.+|++|.+.
T Consensus 21 l~Gk~vvV~G-YG~vG~g~A~~lr~~--Ga~V~V~e~DPi~alq--A~~-dGf~v~--------~~~~a~~~adi~vtaT 86 (162)
T PF00670_consen 21 LAGKRVVVIG-YGKVGKGIARALRGL--GARVTVTEIDPIRALQ--AAM-DGFEVM--------TLEEALRDADIFVTAT 86 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHT--T-EEEEE-SSHHHHHH--HHH-TT-EEE---------HHHHTTT-SEEEE-S
T ss_pred eCCCEEEEeC-CCcccHHHHHHHhhC--CCEEEEEECChHHHHH--hhh-cCcEec--------CHHHHHhhCCEEEECC
Confidence 6789999999 999999999999997 8999999998865332 222 234332 2567888999999998
Q ss_pred CCCC
Q 014177 117 GPFQ 120 (429)
Q Consensus 117 gp~~ 120 (429)
|...
T Consensus 87 G~~~ 90 (162)
T PF00670_consen 87 GNKD 90 (162)
T ss_dssp SSSS
T ss_pred CCcc
Confidence 8643
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0047 Score=56.88 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=73.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH--------------HhC-CCcEEEEe---eCCCh--
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS--------------TLG-KNSEFAEV---NIYNE-- 99 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~--------------~l~-~~v~~~~~---Dl~d~-- 99 (429)
|++.++| -|.+|..++++|.++ +++++..|+|++..+.++. .++ +++-|+-+ |++|.
T Consensus 1 M~iGmiG-LGrMG~n~v~rl~~~--ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi 77 (300)
T COG1023 1 MQIGMIG-LGRMGANLVRRLLDG--GHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVI 77 (300)
T ss_pred Ccceeec-cchhhHHHHHHHHhC--CCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHH
Confidence 4677888 799999999999997 8999999999876555443 333 45555543 45552
Q ss_pred HHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChh
Q 014177 100 GSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTI 146 (429)
Q Consensus 100 ~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~ 146 (429)
+.+...+..-|+||.--..+ ...+.+-.+...+.|+||+|+..+..
T Consensus 78 ~~la~~L~~GDivIDGGNS~-y~Ds~rr~~~l~~kgi~flD~GTSGG 123 (300)
T COG1023 78 DDLAPLLSAGDIVIDGGNSN-YKDSLRRAKLLAEKGIHFLDVGTSGG 123 (300)
T ss_pred HHHHhhcCCCCEEEECCccc-hHHHHHHHHHHHhcCCeEEeccCCCC
Confidence 45666677889999864322 22335556667889999999987654
|
|
| >COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.01 Score=55.75 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=84.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+++++.| +|.+|.+.++.|.+ .|+++++.+ +++..|.-+-..++....+.-..+-++.+..-. ....+++++...
T Consensus 2 ~~~vvqyG-tG~vGv~air~l~a-kpe~elvgawv~s~ak~Gkdlgelagl~dlgV~a~~~~~avlA-tl~~~~~y~~~~ 78 (350)
T COG3804 2 SLRVVQYG-TGSVGVAAIRGLLA-KPELELVGAWVHSAAKSGKDLGELAGLPDLGVIATNSIDAVLA-TLADAVIYAPLL 78 (350)
T ss_pred CceeEEec-cchHHHHHHHHHHc-CCCCceEEEEecCcccccccHHHhcCCCCceeEeeccccccee-ccccceeeeccc
Confidence 36899998 89999999999998 478988764 666655333223332222222222222221111 112344444433
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhH-----HHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHH
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIY-----SQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~-----~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~ 185 (429)
|. ..-.+.|+++|++.|-.+....| -.......+.+.++|..-+.+.|..||.++-+.-.+..
T Consensus 79 ~~-----~~~y~rlL~aGiNVv~~g~~l~yPw~~~PelaeKpl~lAaraGn~Tl~gtGI~pGF~~dllpmlLs 146 (350)
T COG3804 79 PS-----VDEYARLLRAGINVVTPGPVLQYPWFYPPELAEKPLELAARAGNATLHGTGIGPGFVTDLLPMLLS 146 (350)
T ss_pred ch-----HHHHHHHHHcCCceeccCccccCCCcCChHHhhchHHHHHhcCCceEEecccCccHHHHHHHHHHc
Confidence 31 45678899999999855433221 12344567778889998899999999987766655553
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0031 Score=64.92 Aligned_cols=92 Identities=25% Similarity=0.229 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc-CccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR-DVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~ 114 (429)
+.+++|+|+|++| +|.++++.|++. |++|++.|++........+.+. ..+++...+ +... .+. ++|+||+
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~--G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~---~~~~~~d~vV~ 74 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKL--GANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLE---LLDEDFDLMVK 74 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHC--CCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHH---HhcCcCCEEEE
Confidence 5678999999876 999999999997 8999999986543222222221 123333222 2222 233 4999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
..|.... .+++++|.+.|++.+
T Consensus 75 s~gi~~~---~~~~~~a~~~~i~v~ 96 (447)
T PRK02472 75 NPGIPYT---NPMVEKALEKGIPII 96 (447)
T ss_pred CCCCCCC---CHHHHHHHHCCCcEE
Confidence 9876543 467788888777654
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0012 Score=65.08 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=48.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCC-----CceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH-----------HHHH
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCP-----DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG-----------SLLM 104 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~-----g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~-----------~l~~ 104 (429)
+|.|+|++|.||+.++..|...+- .+++++.|+++... ..+....|+.|.. ...+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~ 71 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------VLEGVVMELMDCAFPLLDGVVPTHDPAV 71 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------ccceeEeehhcccchhcCceeccCChHH
Confidence 589999989999999999986421 12699999865430 1222333444332 2356
Q ss_pred HhcCccEEEecCCCCC
Q 014177 105 ALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~ 120 (429)
.++++|+||++||...
T Consensus 72 ~~~~aDiVVitAG~~~ 87 (324)
T TIGR01758 72 AFTDVDVAILVGAFPR 87 (324)
T ss_pred HhCCCCEEEEcCCCCC
Confidence 7889999999998643
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.011 Score=54.27 Aligned_cols=81 Identities=16% Similarity=0.229 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+.+|++||+|-. -.|+-.|++.|.++ |.++.....++ .+.+.++++++ .....+||+++.+++++++.
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~--GAeL~fTy~~e~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQ--GAELAFTYQGERLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHH
Confidence 3778999999943 35888899999998 88888765544 23344444443 24578999999998888775
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
+.|.++|+.+..
T Consensus 80 ~~~g~lD~lVHsIaFa 95 (259)
T COG0623 80 KKWGKLDGLVHSIAFA 95 (259)
T ss_pred HhhCcccEEEEEeccC
Confidence 689999998754
|
|
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0044 Score=59.93 Aligned_cols=99 Identities=19% Similarity=0.254 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchh-HHHHHHHhCCCcEEEEeeCCChHHHHHH--hcCccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREK-GAAMVSTLGKNSEFAEVNIYNEGSLLMA--LRDVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~~~l~~~--~~~~DvV 112 (429)
|++.+|.|+| +|.+|...+..+.+ .++.++. ++|+++++ ..+.+++++ +.. -..+.+.+-+. +.++|+|
T Consensus 2 m~klrVAIIG-tG~IGt~hm~~l~~-~~~velvAVvdid~es~gla~A~~~G--i~~---~~~~ie~LL~~~~~~dIDiV 74 (302)
T PRK08300 2 MSKLKVAIIG-SGNIGTDLMIKILR-SEHLEPGAMVGIDPESDGLARARRLG--VAT---SAEGIDGLLAMPEFDDIDIV 74 (302)
T ss_pred CCCCeEEEEc-CcHHHHHHHHHHhc-CCCcEEEEEEeCChhhHHHHHHHHcC--CCc---ccCCHHHHHhCcCCCCCCEE
Confidence 4567899999 89999998888877 4677776 46777763 224444443 211 12344444332 2579999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.+++.... ......+.++|++.+|.+...
T Consensus 75 f~AT~a~~H---~e~a~~a~eaGk~VID~sPA~ 104 (302)
T PRK08300 75 FDATSAGAH---VRHAAKLREAGIRAIDLTPAA 104 (302)
T ss_pred EECCCHHHH---HHHHHHHHHcCCeEEECCccc
Confidence 999876433 677888999999999987544
|
|
| >PRK11579 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.021 Score=56.79 Aligned_cols=144 Identities=16% Similarity=0.101 Sum_probs=83.1
Q ss_pred CCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 39 NARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
+.+|.|+| +|.+|+ ..+..+.+ .++++++ +++++.++.. +.++ .... ..| ++++++ ++|+|+.
T Consensus 4 ~irvgiiG-~G~i~~~~~~~~~~~-~~~~~l~av~d~~~~~~~---~~~~-~~~~----~~~---~~ell~~~~vD~V~I 70 (346)
T PRK11579 4 KIRVGLIG-YGYASKTFHAPLIAG-TPGLELAAVSSSDATKVK---ADWP-TVTV----VSE---PQHLFNDPNIDLIVI 70 (346)
T ss_pred cceEEEEC-CCHHHHHHHHHHHhh-CCCCEEEEEECCCHHHHH---hhCC-CCce----eCC---HHHHhcCCCCCEEEE
Confidence 36899999 588997 45666665 4678776 4677765543 2221 1111 133 455564 6899999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
|..+... ..++..|+++|.|.+-=---.........+.+.++++|+.+.++--.-+...-..++.+++. -...+
T Consensus 71 ~tp~~~H---~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~---g~iG~ 144 (346)
T PRK11579 71 PTPNDTH---FPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAE---GVLGE 144 (346)
T ss_pred cCCcHHH---HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhc---CCCCC
Confidence 9765443 68889999999887621000011234446667788888877655332222222233444432 23445
Q ss_pred CeEEEEE
Q 014177 195 PERLRFS 201 (429)
Q Consensus 195 v~~i~~~ 201 (429)
+..++..
T Consensus 145 i~~~~~~ 151 (346)
T PRK11579 145 VAYFESH 151 (346)
T ss_pred eEEEEEE
Confidence 5555543
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0048 Score=60.05 Aligned_cols=92 Identities=21% Similarity=0.143 Sum_probs=61.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+| .|.+|+.+++.|.+. +++|++.+|++++.+.+.+.- .. ...+.+++.+.++++|+||-|..+.
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~--g~~V~~~dr~~~~~~~l~~~g---~~----~~~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKR--GHDCVGYDHDQDAVKAMKEDR---TT----GVANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcC---Cc----ccCCHHHHHhhcCCCCEEEEEcCch
Confidence 4799999 699999999999986 799999999999888776521 11 1134455555566788888887543
Q ss_pred CCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 120 QQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
.. ..+++... +.|.-.||.++.
T Consensus 71 ~~---~~v~~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 71 IV---DAVLEELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred HH---HHHHHHHHhhCCCCCEEEECCCC
Confidence 11 34444332 234445665543
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0016 Score=66.77 Aligned_cols=91 Identities=23% Similarity=0.356 Sum_probs=63.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+||+|.+|+.+++.|.+. +++|++.+|++++..+++..++ +. .. .+..+.+.++|+||-|+.+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~--G~~V~v~~r~~~~~~~~a~~~g--v~-----~~--~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK--GFEVIVTGRDPKKGKEVAKELG--VE-----YA--NDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHcC--Ce-----ec--cCHHHHhccCCEEEEecCHH
Confidence 47999999999999999999987 7899999999887666655442 21 11 12345677899999998654
Q ss_pred CCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 120 QQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
.. ..+++... ..+.-.+|+++.
T Consensus 70 ~~---~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 70 VT---EDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred HH---HHHHHHHHhhCCCCCEEEEcccc
Confidence 32 34444332 345556788753
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0029 Score=57.50 Aligned_cols=91 Identities=29% Similarity=0.356 Sum_probs=58.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
||++.|+| +|.+|+.+++.|.+. +++|++..|+ +++.+..++.+...+ + .-+..++.+.+|+||-+.
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~a--g~eV~igs~r~~~~~~a~a~~l~~~i-------~-~~~~~dA~~~aDVVvLAV- 68 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKA--GHEVIIGSSRGPKALAAAAAALGPLI-------T-GGSNEDAAALADVVVLAV- 68 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhC--CCeEEEecCCChhHHHHHHHhhcccc-------c-cCChHHHHhcCCEEEEec-
Confidence 46677776 899999999999997 8999999665 455556666554331 1 122445677899999765
Q ss_pred CCCCCchHHHHHHHHH-c-CCcEEEeCC
Q 014177 118 PFQQAPKCTVLEAAIE-T-KTAYIDVCD 143 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~-~-gv~~vdis~ 143 (429)
||... ..+++...+ . |.-.||.+.
T Consensus 69 P~~a~--~~v~~~l~~~~~~KIvID~tn 94 (211)
T COG2085 69 PFEAI--PDVLAELRDALGGKIVIDATN 94 (211)
T ss_pred cHHHH--HhHHHHHHHHhCCeEEEecCC
Confidence 55432 334444332 3 344566654
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0044 Score=57.99 Aligned_cols=99 Identities=16% Similarity=0.110 Sum_probs=63.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------------------HHHHHH---HhCCC--cEEEEeeC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------------------GAAMVS---TLGKN--SEFAEVNI 96 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------------------~~~l~~---~l~~~--v~~~~~Dl 96 (429)
+|+|+|+ |.+|..+++.|+..+-+ +++++|.+.-. .+..++ ++.+. +.....++
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg-~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i 78 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFG-QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKV 78 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 5899995 66999999999987433 78888864321 111111 12222 44455566
Q ss_pred CChHHH-HHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 97 YNEGSL-LMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 97 ~d~~~l-~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+.+.. .++++++|+||++...... ...+-+.|.+.++++|+...
T Consensus 79 ~~~~~~~~~f~~~~DvVi~a~Dn~~a--R~~ln~~c~~~~iplI~~g~ 124 (234)
T cd01484 79 GPEQDFNDTFFEQFHIIVNALDNIIA--RRYVNGMLIFLIVPLIESGT 124 (234)
T ss_pred ChhhhchHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEcc
Confidence 443322 4567899999998764432 24567788888888887653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.004 Score=63.01 Aligned_cols=104 Identities=20% Similarity=0.272 Sum_probs=68.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCCcE-
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKNSE- 90 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~v~- 90 (429)
++.++..+|+|+|+ |.+|+.+++.|+..+.+ +++++|.+.- |.+..++ ++.+.++
T Consensus 37 q~~L~~~~VlviG~-GGlGs~va~~La~~Gvg-~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i 114 (392)
T PRK07878 37 QKRLKNARVLVIGA-GGLGSPTLLYLAAAGVG-TLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNV 114 (392)
T ss_pred HHHHhcCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEE
Confidence 44567899999996 66999999999997543 7888875421 2222222 2223333
Q ss_pred -EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 91 -FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 91 -~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
.....++. +...++++++|+||.|..-+.. ..-+-++|.+.++++|..+
T Consensus 115 ~~~~~~i~~-~~~~~~~~~~D~Vvd~~d~~~~--r~~ln~~~~~~~~p~v~~~ 164 (392)
T PRK07878 115 RLHEFRLDP-SNAVELFSQYDLILDGTDNFAT--RYLVNDAAVLAGKPYVWGS 164 (392)
T ss_pred EEEeccCCh-hHHHHHHhcCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEE
Confidence 34444443 4466778899999998764432 2446678999999988543
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.004 Score=62.89 Aligned_cols=104 Identities=18% Similarity=0.179 Sum_probs=70.1
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHHh---CCC--
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVSTL---GKN-- 88 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~l---~~~-- 88 (429)
.++.++..+|+|+|+ |.+|+.+++.|+..+-+ +++++|.+.- |.+..++.+ .+.
T Consensus 32 ~q~~L~~~~VlivG~-GGlG~~va~~La~~Gvg-~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~ 109 (390)
T PRK07411 32 GQKRLKAASVLCIGT-GGLGSPLLLYLAAAGIG-RIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQ 109 (390)
T ss_pred HHHHHhcCcEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCe
Confidence 456678899999996 55999999999997433 7888875421 222222222 233
Q ss_pred cEEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 89 SEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 89 v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
++.+...++. +...++++++|+||.|...+.. -..+-++|.+.+++.|..
T Consensus 110 v~~~~~~~~~-~~~~~~~~~~D~Vvd~~d~~~~--r~~ln~~~~~~~~p~v~~ 159 (390)
T PRK07411 110 VDLYETRLSS-ENALDILAPYDVVVDGTDNFPT--RYLVNDACVLLNKPNVYG 159 (390)
T ss_pred EEEEecccCH-HhHHHHHhCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEE
Confidence 4444444544 3456778899999999876532 145668899999998843
|
|
| >PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.019 Score=58.27 Aligned_cols=124 Identities=17% Similarity=0.107 Sum_probs=75.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeCC-------------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIY------------------- 97 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~------------------- 97 (429)
.++|.|+|+||.||+...+-+.+....++|+. +++|.+.+.....++.++.-. ..|-.
T Consensus 57 ~KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni~lL~~q~~~f~p~~v~-v~d~~~~~~l~~~l~~~~~~~~vl 135 (454)
T PLN02696 57 PKPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFKPKLVA-VRNESLVDELKEALADLDDKPEII 135 (454)
T ss_pred ccEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhCCCEEE-EcCHHHHHHHHHhhcCCCCCcEEE
Confidence 48999999999999999998887422356644 457777777766666433211 12211
Q ss_pred -ChHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 98 -NEGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 98 -d~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
..+.+.+++. ++|+|+++..-+. | ..-.-+|+++|.+ |-++.-......-..+...++++|..++|
T Consensus 136 ~G~egl~~la~~~evDiVV~AIvG~a--G-L~pTl~AIkaGK~-VALANKESLV~aG~lI~~~ak~~~~~IlP 204 (454)
T PLN02696 136 PGEEGIVEVARHPEAVTVVTGIVGCA--G-LKPTVAAIEAGKD-IALANKETLIAGGPFVLPLAKKHGVKILP 204 (454)
T ss_pred ECHHHHHHHHcCCCCCEEEEeCcccc--c-hHHHHHHHHCCCc-EEEecHHHHHhhHHHHHHHHHHcCCeEee
Confidence 2245666665 5799999875332 2 3334677889865 54554333322222344556677766654
|
|
| >TIGR02130 dapB_plant dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.013 Score=55.71 Aligned_cols=124 Identities=15% Similarity=0.147 Sum_probs=75.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEE-eeCCChHHHHHHhcC-cc-EEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAE-VNIYNEGSLLMALRD-VD-LVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~-~Dl~d~~~l~~~~~~-~D-vVi~~a 116 (429)
+|+|.|++|.+|+.+++.+.+ ++.+++.+.-+.. ..+.+.+-.+-.+..+. -|. ...+.++++. +| ++|...
T Consensus 2 ~V~V~Ga~GkMG~~v~~av~~--~~~~Lv~~~~~~~~~~~~~~~~~g~~v~v~~~~~~--~~~l~~~~~~~~d~VvIDFT 77 (275)
T TIGR02130 2 QIMVNGCPGKMGKAVAEAADA--AGLEIVPTSFGGEEEAENEAEVAGKEILLHGPSER--EARIGEVFAKYPELICIDYT 77 (275)
T ss_pred eEEEeCCCChHHHHHHHHHhc--CCCEEEeeEccccccccchhhhcccceeeeccccc--cccHHHHHhhcCCEEEEECC
Confidence 799999999999999999876 3888887522211 11111111111111110 111 2346666665 89 999988
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
-|... ...++.|.+.|++.|.=++. +.. +...+ .++++++++...-++.|..
T Consensus 78 ~P~~~---~~n~~~~~~~gv~~ViGTTG--~~~~~~~~l---~~~~~i~~l~apNfSiGv~ 130 (275)
T TIGR02130 78 HPSAV---NDNAAFYGKHGIPFVMGTTG--GDREALAKL---VADAKHPAVIAPNMAKQIV 130 (275)
T ss_pred ChHHH---HHHHHHHHHCCCCEEEcCCC--CCHHHHHHH---HHhcCCCEEEECcccHHHH
Confidence 77544 67799999999999843322 211 22233 3335688888888887765
|
This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0025 Score=64.20 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcC----------------ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGG----------------TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga----------------~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
++++++|+|+|| +|.+|.++++.|..+ |++|++..++.... .+. .....|+++.
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~--Ga~V~~~~g~~~~~------~~~--~~~~~~v~~~ 251 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR--GADVTLITGPVSLL------TPP--GVKSIKVSTA 251 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC--CCEEEEeCCCCccC------CCC--CcEEEEeccH
Confidence 478899999998 367999999999998 89999887654321 112 2356799888
Q ss_pred HHH-HHHh----cCccEEEecCCCCC
Q 014177 100 GSL-LMAL----RDVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l-~~~~----~~~DvVi~~agp~~ 120 (429)
+++ ++++ .++|++||+|+...
T Consensus 252 ~~~~~~~~~~~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 252 EEMLEAALNELAKDFDIFISAAAVAD 277 (390)
T ss_pred HHHHHHHHHhhcccCCEEEEcccccc
Confidence 777 4444 36899999999754
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0037 Score=64.88 Aligned_cols=121 Identities=15% Similarity=0.231 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++++|+|+ |.+|++++..|.+. |++|++.+|+.++++.+.+.+.. . ..+..+ +.+ +.++|+||||.
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~--G~~V~i~~R~~~~~~~la~~~~~--~--~~~~~~---~~~-l~~~DiVInat 398 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARA--GAELLIFNRTKAHAEALASRCQG--K--AFPLES---LPE-LHRIDIIINCL 398 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcc--c--eechhH---hcc-cCCCCEEEEcC
Confidence 45689999995 78999999999987 77999999999888887765431 1 122222 222 46899999998
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
..... +.+ ... .-.+|+...+.- ..+...+++.|..++.| -.++..+.+..+
T Consensus 399 P~g~~-----~~~-~l~--~~v~D~~Y~P~~----T~ll~~A~~~G~~~~~G-------~~Ml~~Qa~~~f 450 (477)
T PRK09310 399 PPSVT-----IPK-AFP--PCVVDINTLPKH----SPYTQYARSQGSSIIYG-------YEMFAEQALLQF 450 (477)
T ss_pred CCCCc-----chh-HHh--hhEEeccCCCCC----CHHHHHHHHCcCEEECc-------HHHHHHHHHHHH
Confidence 54321 111 111 145677654421 23557788888776544 244556666544
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0029 Score=58.86 Aligned_cols=96 Identities=26% Similarity=0.377 Sum_probs=69.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
+++|+|+|||+ =++.+++.|... +..+++.. -.+...++..... ..+.+-..+.+.+.++++ ++|+||.+.
T Consensus 2 ~~~ilvlGGT~-Dar~la~~L~~~--~~~~~~ss-~t~~g~~l~~~~~---~~~~~G~l~~e~l~~~l~e~~i~llIDAT 74 (257)
T COG2099 2 MMRILLLGGTS-DARALAKKLAAA--PVDIILSS-LTGYGAKLAEQIG---PVRVGGFLGAEGLAAFLREEGIDLLIDAT 74 (257)
T ss_pred CceEEEEeccH-HHHHHHHHhhcc--CccEEEEE-cccccccchhccC---CeeecCcCCHHHHHHHHHHcCCCEEEECC
Confidence 57899999998 799999999986 32333322 1122222333222 256666778888999987 899999999
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
-||...-+.+.+++|.+.|++|+-+
T Consensus 75 HPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 75 HPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred ChHHHHHHHHHHHHHHHhCCcEEEE
Confidence 8887655579999999999999844
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0017 Score=58.14 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=50.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
....+.+++|.|+| +|.||+.+++.|... |.+|+..+|+......... . .+ .. .+++++++++|+|
T Consensus 30 ~~~~l~g~tvgIiG-~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~-~--~~---~~-----~~l~ell~~aDiv 95 (178)
T PF02826_consen 30 PGRELRGKTVGIIG-YGRIGRAVARRLKAF--GMRVIGYDRSPKPEEGADE-F--GV---EY-----VSLDELLAQADIV 95 (178)
T ss_dssp TBS-STTSEEEEES-TSHHHHHHHHHHHHT--T-EEEEEESSCHHHHHHHH-T--TE---EE-----SSHHHHHHH-SEE
T ss_pred CccccCCCEEEEEE-EcCCcCeEeeeeecC--CceeEEecccCChhhhccc-c--cc---ee-----eehhhhcchhhhh
Confidence 34467899999999 799999999999986 8999999998875442211 1 11 11 2366788899999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
+++...
T Consensus 96 ~~~~pl 101 (178)
T PF02826_consen 96 SLHLPL 101 (178)
T ss_dssp EE-SSS
T ss_pred hhhhcc
Confidence 988753
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0036 Score=61.74 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=67.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|+| +|.+|+..+..+....+--+|.+.+|++++.+++.+++.. .++... +.| +++++.++|+||+|.
T Consensus 127 ~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~--~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 127 AKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYV--VNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEE--eCC---HHHHHhcCCEEEEcc
Confidence 47899999 5889999888876532234899999999999988876642 222222 233 456778999999987
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+-.+ ++++.+++.|.|.+-+.++.
T Consensus 201 ~s~~-----p~i~~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 201 NAKT-----PVFSEKLKKGVHINAVGSFM 224 (325)
T ss_pred CCCC-----cchHHhcCCCcEEEecCCCC
Confidence 5332 33337788999987776543
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0021 Score=62.82 Aligned_cols=96 Identities=21% Similarity=0.129 Sum_probs=68.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
..++++|+| +|.+|+..++.+....+..+|.+.+|++++++++++++.. .+... . ++.++++.++|+||+|.
T Consensus 124 ~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~---~~~~~av~~aDiVitaT 196 (304)
T PRK07340 124 PPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---P---LDGEAIPEAVDLVVTAT 196 (304)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---E---CCHHHHhhcCCEEEEcc
Confidence 457899999 5999999999997633335899999999999998887742 12222 2 33556778999999997
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
... .++++..++.|.|..-++++.
T Consensus 197 ~s~-----~Pl~~~~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 197 TSR-----TPVYPEAARAGRLVVAVGAFT 220 (304)
T ss_pred CCC-----CceeCccCCCCCEEEecCCCC
Confidence 532 255555567787777666543
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0059 Score=59.29 Aligned_cols=67 Identities=21% Similarity=0.278 Sum_probs=50.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+++|.|+| .|.+|+.+++.|.+. +++|++.+|++++.+.+.+. .+.. .++..++++++|+||-|...
T Consensus 2 ~~~IgviG-~G~mG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~---g~~~-------~~~~~e~~~~~d~vi~~vp~ 68 (296)
T PRK11559 2 TMKVGFIG-LGIMGKPMSKNLLKA--GYSLVVYDRNPEAVAEVIAA---GAET-------ASTAKAVAEQCDVIITMLPN 68 (296)
T ss_pred CceEEEEc-cCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC---CCee-------cCCHHHHHhcCCEEEEeCCC
Confidence 46899999 699999999999986 78999999999887766531 1211 12244567789999998753
|
|
| >TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.011 Score=58.64 Aligned_cols=124 Identities=19% Similarity=0.158 Sum_probs=72.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeCC-------------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIY------------------- 97 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~------------------- 97 (429)
||+|.|+|+||.||.+..+-+.+....++|+. +++|.+.+.+...++.++.-.+ .|-.
T Consensus 1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~~~L~~q~~~f~p~~v~i-~d~~~~~~l~~~l~~~~~~~~v~ 79 (389)
T TIGR00243 1 MKQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEFRPKFVAI-DDEASLKDLKTMLQQQGSRTEVL 79 (389)
T ss_pred CceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHcCCCEEEE-cCHHHHHHHHHHhhcCCCCcEEE
Confidence 47999999999999999988776322466655 4577778877777765432221 2211
Q ss_pred -ChHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 98 -NEGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 98 -d~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
..+.+.+++. ++|+|+++.--+ .| ..-.-++++.|.+ |-++.-......-.-+...+++++..++|
T Consensus 80 ~G~~~l~~l~~~~~~D~vv~AivG~--aG-L~pt~~Ai~~gk~-iaLANKEsLV~aG~li~~~a~~~~~~I~P 148 (389)
T TIGR00243 80 VGEEGICEMAALEDVDQVMNAIVGA--AG-LLPTLAAIRAGKT-IALANKESLVTAGHLFLDAVKKYGVQLLP 148 (389)
T ss_pred ECHHHHHHHHcCCCCCEEEEhhhcH--hh-HHHHHHHHHCCCc-EEEechhHHHhhHHHHHHHHHHcCCeEEe
Confidence 2334444444 479999876322 22 3444556788854 44554333322222234455666666554
|
1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0058 Score=59.58 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=66.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCC--cEEEEeeC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKN--SEFAEVNI 96 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~--v~~~~~Dl 96 (429)
+|+|+|+ |.+|..+++.|+..+.+ +++++|.+.- |.+..++ ++.+. ++....++
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg-~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i 78 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFG-EIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANI 78 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCC-eEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccC
Confidence 5899996 66999999999987433 7888875422 2222222 22233 44455566
Q ss_pred CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.+.+...++++++|+||++...... ...+-+.|.+.++++|+...
T Consensus 79 ~~~~~~~~f~~~~DvVv~a~Dn~~a--r~~in~~c~~~~ip~I~~gt 123 (312)
T cd01489 79 KDPDFNVEFFKQFDLVFNALDNLAA--RRHVNKMCLAADVPLIESGT 123 (312)
T ss_pred CCccchHHHHhcCCEEEECCCCHHH--HHHHHHHHHHCCCCEEEEec
Confidence 6543345678899999999865432 24577889999999998653
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0032 Score=55.84 Aligned_cols=80 Identities=20% Similarity=0.237 Sum_probs=56.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.++.+++|+|+|+++.+|..+++.|.++ +.+|++.+|+. +.+.+.++++|+||+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~--g~~V~v~~r~~------------------------~~l~~~l~~aDiVIs 93 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNR--NATVTVCHSKT------------------------KNLKEHTKQADIVIV 93 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhC--CCEEEEEECCc------------------------hhHHHHHhhCCEEEE
Confidence 4588999999997656799999999987 77899988762 235667889999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.+-..... .. -++.+.-.||++...
T Consensus 94 at~~~~ii~-~~----~~~~~~viIDla~pr 119 (168)
T cd01080 94 AVGKPGLVK-GD----MVKPGAVVIDVGINR 119 (168)
T ss_pred cCCCCceec-HH----HccCCeEEEEccCCC
Confidence 986422211 11 234455567777543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0055 Score=65.06 Aligned_cols=88 Identities=19% Similarity=0.172 Sum_probs=66.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
..+++|+| +|.+|+.+++.|.++ ++++++.|.|+++.+++.+ .....+.+|.+|++.++++ ++++|.|+-+.+
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~--g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAA--GIPLVVIETSRTRVDELRE---RGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH---CCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 35799999 699999999999987 7899999999999887764 3578999999999988765 458998876654
Q ss_pred CCCCCchHHHHHHHHHc
Q 014177 118 PFQQAPKCTVLEAAIET 134 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~ 134 (429)
-.. .+..+..++++.
T Consensus 491 ~~~--~~~~iv~~~~~~ 505 (558)
T PRK10669 491 NGY--EAGEIVASAREK 505 (558)
T ss_pred ChH--HHHHHHHHHHHH
Confidence 211 123455555443
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0051 Score=65.77 Aligned_cols=90 Identities=16% Similarity=0.130 Sum_probs=70.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
..+|+|+| +|.+|+.+++.|.++ ++++++.|.|+++.+.+.+ .....+.+|.+|++.++++ ++++|.||-+.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMAN--KMRITVLERDISAVNLMRK---YGYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHh---CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 35799999 799999999999987 7899999999998887754 2468899999999988776 558999998865
Q ss_pred CCCCCchHHHHHHHHHcCC
Q 014177 118 PFQQAPKCTVLEAAIETKT 136 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv 136 (429)
-.. .+..+.+.+++...
T Consensus 474 d~~--~n~~i~~~~r~~~p 490 (601)
T PRK03659 474 EPE--DTMKIVELCQQHFP 490 (601)
T ss_pred CHH--HHHHHHHHHHHHCC
Confidence 321 22456666666543
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.013 Score=57.20 Aligned_cols=69 Identities=22% Similarity=0.187 Sum_probs=47.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|+|.|+| .|.+|+.+++.|++. +++|++.+|++++.+.+.+ . .+.. ..+.+++.+.++++|+||-+..+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~-~--g~~~----~~~~~e~~~~~~~~dvvi~~v~~ 69 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRG--GHEVVGYDRNPEAVEALAE-E--GATG----ADSLEELVAKLPAPRVVWLMVPA 69 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHH-C--CCee----cCCHHHHHhhcCCCCEEEEEecC
Confidence 4799999 799999999999987 7899999999988877654 1 1211 12333333323346777777643
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0075 Score=55.74 Aligned_cols=105 Identities=22% Similarity=0.245 Sum_probs=63.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHHh---CCCcEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVSTL---GKNSEFA 92 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~l---~~~v~~~ 92 (429)
+.++..+|+|+|. |.+|+++++.|++.+-| ++++.|-+.- |.+.+++.+ .+..+..
T Consensus 26 ekl~~~~V~VvGi-GGVGSw~veALaRsGig-~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~ 103 (263)
T COG1179 26 EKLKQAHVCVVGI-GGVGSWAVEALARSGIG-RITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVT 103 (263)
T ss_pred HHHhhCcEEEEec-CchhHHHHHHHHHcCCC-eEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEe
Confidence 3456789999996 55999999999998433 7777764311 122222222 2233332
Q ss_pred Ee-eCCChHHHHHHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 93 EV-NIYNEGSLLMALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 93 ~~-Dl~d~~~l~~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.. |.-.++.+++++. ++|.||.|...... ...+++.|.+.+++.|-..+
T Consensus 104 ~~~~f~t~en~~~~~~~~~DyvIDaiD~v~~--Kv~Li~~c~~~ki~vIss~G 154 (263)
T COG1179 104 AINDFITEENLEDLLSKGFDYVIDAIDSVRA--KVALIAYCRRNKIPVISSMG 154 (263)
T ss_pred ehHhhhCHhHHHHHhcCCCCEEEEchhhhHH--HHHHHHHHHHcCCCEEeecc
Confidence 22 3344566666665 58888888653322 25677778888877764443
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0015 Score=62.84 Aligned_cols=101 Identities=15% Similarity=0.086 Sum_probs=57.9
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------------------HHHHH---HHhCCCcE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------------------GAAMV---STLGKNSE 90 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------------------~~~l~---~~l~~~v~ 90 (429)
.++.++..+|+|+|+ |.+|..+++.|+..+.+ +++++|.+.-. ++..+ +++.+.++
T Consensus 13 aq~kL~~s~VLIvG~-gGLG~EiaKnLalaGVg-~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~ 90 (286)
T cd01491 13 AMKKLQKSNVLISGL-GGLGVEIAKNLILAGVK-SVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVP 90 (286)
T ss_pred HHHHHhcCcEEEEcC-CHHHHHHHHHHHHcCCC-eEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCE
Confidence 445677899999996 55999999999997433 78888854321 12111 12223333
Q ss_pred EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEE
Q 014177 91 FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID 140 (429)
Q Consensus 91 ~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd 140 (429)
....+-. ...+.+.++|+||.|...... ...+-++|.+.++++|.
T Consensus 91 V~~~~~~---~~~~~l~~fdvVV~~~~~~~~--~~~in~~c~~~~ipfI~ 135 (286)
T cd01491 91 VTVSTGP---LTTDELLKFQVVVLTDASLED--QLKINEFCHSPGIKFIS 135 (286)
T ss_pred EEEEecc---CCHHHHhcCCEEEEecCCHHH--HHHHHHHHHHcCCEEEE
Confidence 2222211 112345677777777543221 13455666666666664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0058 Score=65.59 Aligned_cols=89 Identities=16% Similarity=0.140 Sum_probs=69.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
..+|+|+| +|.+|+.+++.|.++ +.++++.|.|+++.+.+.+ .+...+.+|.+|++.++++ ++++|.||-+.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~---~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSS--GVKMTVLDHDPDHIETLRK---FGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHh---cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 36899999 799999999999987 7899999999999888765 3478899999999988764 458999998864
Q ss_pred CCCCCchHHHHHHHHHcC
Q 014177 118 PFQQAPKCTVLEAAIETK 135 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~g 135 (429)
-.. .+..+.+.+++..
T Consensus 474 d~~--~n~~i~~~ar~~~ 489 (621)
T PRK03562 474 DPQ--TSLQLVELVKEHF 489 (621)
T ss_pred CHH--HHHHHHHHHHHhC
Confidence 221 2245556666654
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0024 Score=62.07 Aligned_cols=99 Identities=27% Similarity=0.263 Sum_probs=60.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.|+|++|.+|+.+++.|.++++.++ +.+........++..+ +.+....+.-|+.|.. .++++|+|+.|+|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~-f~~~~~~v~~~~~~~~----~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIE-FGGKSIGVPEDAADEF----VFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCcccc-ccCccccCcccccccc----ccccCCEEEEeCc
Confidence 47899999999999999999999755554 3333322222221111 1111111122222222 2338999999997
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
-... ..+...+.++|+-.||-++.-
T Consensus 76 ~~~s---~~~~p~~~~~G~~VIdnsSa~ 100 (334)
T COG0136 76 GSVS---KEVEPKAAEAGCVVIDNSSAF 100 (334)
T ss_pred hHHH---HHHHHHHHHcCCEEEeCCccc
Confidence 4332 578888999998888877643
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.018 Score=55.03 Aligned_cols=78 Identities=23% Similarity=0.302 Sum_probs=53.6
Q ss_pred EEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCchhHHHHHHHhCCCcEEE-EeeCCChHHHHHHhcCccEEEecCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNREKGAAMVSTLGKNSEFA-EVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~~~~~l~~~l~~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|.|+|++|.+|..++..|+..+ ...++++.|++.++++....++..-.... ...+.-.+++.+.++++|+||.+++.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799988999999999999863 23699999999888777665553111110 11221122345678899999999875
Q ss_pred C
Q 014177 119 F 119 (429)
Q Consensus 119 ~ 119 (429)
.
T Consensus 81 ~ 81 (263)
T cd00650 81 G 81 (263)
T ss_pred C
Confidence 3
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0048 Score=60.95 Aligned_cols=95 Identities=19% Similarity=0.207 Sum_probs=65.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC--cEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN--SEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|+| +|..|+..+..|....+..+|.+.+|+.++++++.+++..+ +.+.. . +++++++.++|+||++.
T Consensus 132 ~~~v~IiG-aG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~--~---~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 132 ASRAAVIG-AGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTV--A---RDVHEAVAGADIIVTTT 205 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEE--e---CCHHHHHccCCEEEEee
Confidence 47899999 57799999988876333358999999999999998876422 22221 1 23566778999999987
Q ss_pred CCCCCCchHHHHHH-HHHcCCcEEEeCCC
Q 014177 117 GPFQQAPKCTVLEA-AIETKTAYIDVCDD 144 (429)
Q Consensus 117 gp~~~~~~~~v~~a-a~~~gv~~vdis~~ 144 (429)
... .++++. .++.|.|...+..+
T Consensus 206 ~s~-----~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 206 PSE-----EPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred CCC-----CcEecHHHcCCCceEEeeCCC
Confidence 432 245544 35677776655543
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0058 Score=58.38 Aligned_cols=71 Identities=23% Similarity=0.244 Sum_probs=51.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|++|.|+| +|.+|+.+++.|.+.+. ..+|.+.+|+.++.+.+.+.++ +.. ..+ ..+.++++|+||-|..
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g--~~~----~~~---~~~~~~~advVil~v~ 71 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYG--VRA----ATD---NQEAAQEADVVVLAVK 71 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcC--Cee----cCC---hHHHHhcCCEEEEEcC
Confidence 57899999 59999999999988621 1689999999988877765432 211 112 2344678999999886
Q ss_pred CC
Q 014177 118 PF 119 (429)
Q Consensus 118 p~ 119 (429)
+.
T Consensus 72 ~~ 73 (267)
T PRK11880 72 PQ 73 (267)
T ss_pred HH
Confidence 54
|
|
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.04 Score=52.78 Aligned_cols=126 Identities=16% Similarity=0.109 Sum_probs=76.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHH-HHh-cCcc-EEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL-MAL-RDVD-LVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~-~~~-~~~D-vVi~~ 115 (429)
.+|+|.|++|.+|+.+++.+.+ ++.+++.+ ++... .+.+.-++.+ .........|.+.+- +.. +.+| ++|..
T Consensus 12 i~V~V~Ga~G~MG~~~~~av~~--~~~~Lv~~~~~~~~-~~~~~~~~~g-~~v~~~~~~dl~~~l~~~~~~~~~~VvIDF 87 (286)
T PLN02775 12 IPIMVNGCTGKMGHAVAEAAVS--AGLQLVPVSFTGPA-GVGVTVEVCG-VEVRLVGPSEREAVLSSVKAEYPNLIVVDY 87 (286)
T ss_pred CeEEEECCCChHHHHHHHHHhc--CCCEEEEEeccccc-cccccceecc-ceeeeecCccHHHHHHHhhccCCCEEEEEC
Confidence 5999999999999999999988 38887764 33322 1111101111 111222223433322 221 2589 89998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
.-|... ...++.|+++|++.|.-++. +... .+.+...+++++++...-++.|..
T Consensus 88 T~P~a~---~~~~~~~~~~g~~~VvGTTG--~~~e--~l~~~~~~~~i~vv~apNfSiGv~ 141 (286)
T PLN02775 88 TLPDAV---NDNAELYCKNGLPFVMGTTG--GDRD--RLLKDVEESGVYAVIAPQMGKQVV 141 (286)
T ss_pred CChHHH---HHHHHHHHHCCCCEEEECCC--CCHH--HHHHHHhcCCccEEEECcccHHHH
Confidence 876543 67899999999999854322 2211 223334456788888877777753
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0017 Score=63.51 Aligned_cols=75 Identities=25% Similarity=0.298 Sum_probs=52.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc----EEEEeeCCChHHHHHHhcCccEEEec
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS----EFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v----~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|.|+|+ |.+|+.++..|+..+...+|++.|++.++++.++.++.... .....-..+.+ .++++|+||++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~----~l~~aDIVIit 75 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS----DCKDADIVVIT 75 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH----HhCCCCEEEEc
Confidence 47999995 88999999999987322589999999998887776552100 00111122332 35799999999
Q ss_pred CCCC
Q 014177 116 AGPF 119 (429)
Q Consensus 116 agp~ 119 (429)
+|..
T Consensus 76 ag~~ 79 (306)
T cd05291 76 AGAP 79 (306)
T ss_pred cCCC
Confidence 9864
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0062 Score=60.07 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=66.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC--cEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN--SEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~--v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|+| +|..|+..++.|....+-.+|.+.+|+.++++++++++... +++.. . +++++.+.++|+|++|.
T Consensus 129 ~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~--~---~~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 129 SSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTA--A---TDPRAAMSGADIIVTTT 202 (326)
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEE--e---CCHHHHhccCCEEEEec
Confidence 46899999 58899999999975322247999999999999988876421 22221 2 33567778999999997
Q ss_pred CCCCCCchHHHHH-HHHHcCCcEEEeCCC
Q 014177 117 GPFQQAPKCTVLE-AAIETKTAYIDVCDD 144 (429)
Q Consensus 117 gp~~~~~~~~v~~-aa~~~gv~~vdis~~ 144 (429)
+.. .+++. ..++.|.+...+..+
T Consensus 203 ~s~-----~p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSE-----TPILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred CCC-----CcEecHHHcCCCcEEEeeCCC
Confidence 532 23443 346777777666544
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.019 Score=59.38 Aligned_cols=117 Identities=16% Similarity=0.168 Sum_probs=67.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|.+|.|+| .|.+|+.+++.|+++ |++|.+.+|++++.+.+.+.... ...... ..+.+++.+.++++|+||-++.
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil~v~ 75 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASR--GFKISVYNRTYEKTEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVILLIK 75 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEEEeC
Confidence 35799999 699999999999997 89999999999998887653211 111111 2233333333346887777764
Q ss_pred CCCCCchHHHHHHH---HHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc
Q 014177 118 PFQQAPKCTVLEAA---IETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP 164 (429)
Q Consensus 118 p~~~~~~~~v~~aa---~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~ 164 (429)
+... ...+++.. ++.|.-.||.+... + .......+..+++|+.
T Consensus 76 ~~~~--v~~vi~~l~~~L~~g~iIID~gn~~-~-~dt~~r~~~l~~~Gi~ 121 (470)
T PTZ00142 76 AGEA--VDETIDNLLPLLEKGDIIIDGGNEW-Y-LNTERRIKRCEEKGIL 121 (470)
T ss_pred ChHH--HHHHHHHHHhhCCCCCEEEECCCCC-H-HHHHHHHHHHHHcCCe
Confidence 4321 12333332 23444556665432 1 1222223444555544
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.041 Score=57.15 Aligned_cols=100 Identities=22% Similarity=0.223 Sum_probs=64.0
Q ss_pred ccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH
Q 014177 26 TVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 26 ~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~ 105 (429)
++.|+. ..+.+.+++|+|+| .|..|.++++.|.+. |++|++.|++.....++.+.+ .+.+...+ .+.+ .
T Consensus 3 ~~~~~~-~~~~~~~~~v~v~G-~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~--gi~~~~~~-~~~~----~ 71 (473)
T PRK00141 3 ILVPLS-ALPQELSGRVLVAG-AGVSGRGIAAMLSEL--GCDVVVADDNETARHKLIEVT--GVADISTA-EASD----Q 71 (473)
T ss_pred ccChhh-hcccccCCeEEEEc-cCHHHHHHHHHHHHC--CCEEEEECCChHHHHHHHHhc--CcEEEeCC-Cchh----H
Confidence 345554 34456778899999 577999999999987 789999998765544333322 24443321 1112 2
Q ss_pred hcCccEEEecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 106 LRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 106 ~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
+.++|+||...|.... .+.+++|.+.|++.+
T Consensus 72 ~~~~d~vV~Spgi~~~---~p~~~~a~~~gi~v~ 102 (473)
T PRK00141 72 LDSFSLVVTSPGWRPD---SPLLVDAQSQGLEVI 102 (473)
T ss_pred hcCCCEEEeCCCCCCC---CHHHHHHHHCCCcee
Confidence 4578999988765433 356666777666443
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.011 Score=58.69 Aligned_cols=77 Identities=29% Similarity=0.380 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----CccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----~~DvV 112 (429)
-.+++|||.||+|.+|+++++..... +...+++.++.++.+ +.+.++. -..+|..+++..++..+ ++|+|
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~--~~~~v~t~~s~e~~~-l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvV 229 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHA--GAIKVVTACSKEKLE-LVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVV 229 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhc--CCcEEEEEcccchHH-HHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEE
Confidence 45679999999999999999988876 555566666666644 4445542 24578888665555544 59999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
+.|+|..
T Consensus 230 lD~vg~~ 236 (347)
T KOG1198|consen 230 LDCVGGS 236 (347)
T ss_pred EECCCCC
Confidence 9999864
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0074 Score=52.94 Aligned_cols=134 Identities=21% Similarity=0.245 Sum_probs=75.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++|+|+|| |-+|...++.|++. +++|++++ ++..+++.+ ++ .+.+..-.+.. .-++++|+||-+
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~--ga~V~VIs--p~~~~~l~~-l~-~i~~~~~~~~~-----~dl~~a~lViaa 77 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDT--GAFVTVVS--PEICKEMKE-LP-YITWKQKTFSN-----DDIKDAHLIYAA 77 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEc--CccCHHHHh-cc-CcEEEecccCh-----hcCCCceEEEEC
Confidence 467899999995 88999999999997 78998884 444444443 32 34443333222 225689999987
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc-EEecCCCccchhHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP-AITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~-~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
.+.... +..+.+.|.+ +. .+...++.....- .+....+..+.. .+...|.+|.+++.+-+.+...+
T Consensus 78 T~d~e~--N~~i~~~a~~-~~-~vn~~d~~~~~~f--~~pa~v~~~~l~iaisT~G~sP~la~~lr~~ie~~l 144 (157)
T PRK06719 78 TNQHAV--NMMVKQAAHD-FQ-WVNVVSDGTESSF--HTPGVIRNDEYVVTISTSGKDPSFTKRLKQELTSIL 144 (157)
T ss_pred CCCHHH--HHHHHHHHHH-CC-cEEECCCCCcCcE--EeeeEEEECCeEEEEECCCcChHHHHHHHHHHHHHh
Confidence 643221 2445555655 32 3444444331110 000111112232 23345677888887777666544
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.017 Score=55.93 Aligned_cols=65 Identities=15% Similarity=0.256 Sum_probs=49.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+|.|+| .|.+|+.+++.|++. |++|++.+|++++.+.+.+. ... ...+..++++++|+||-|...
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~--G~~V~~~dr~~~~~~~~~~~---g~~-------~~~~~~~~~~~aDivi~~vp~ 65 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKA--GYQLHVTTIGPEVADELLAA---GAV-------TAETARQVTEQADVIFTMVPD 65 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC---CCc-------ccCCHHHHHhcCCEEEEecCC
Confidence 488998 699999999999987 79999999999888776542 111 112345667889999998753
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0041 Score=52.43 Aligned_cols=45 Identities=24% Similarity=0.372 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL 85 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l 85 (429)
..++|.|+|+ |.+|.++++.|.+. +++|..+ +|+.+..+++...+
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~a--g~~v~~v~srs~~sa~~a~~~~ 54 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARA--GHEVVGVYSRSPASAERAAAFI 54 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHT--TSEEEEESSCHH-HHHHHHC--
T ss_pred CccEEEEECC-CHHHHHHHHHHHHC--CCeEEEEEeCCccccccccccc
Confidence 3479999995 99999999999987 7887665 67776666666544
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0039 Score=58.18 Aligned_cols=75 Identities=12% Similarity=0.142 Sum_probs=52.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-------
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL------- 106 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~------- 106 (429)
.|.+..-|.+=-.++|.+|+++++.|+++ |++|++.++... +. . .....+|+.+.+++.+++
T Consensus 10 ~e~iD~VR~itN~SSGgIG~AIA~~la~~--Ga~Vvlv~~~~~-l~-------~-~~~~~~Dv~d~~s~~~l~~~v~~~~ 78 (227)
T TIGR02114 10 SEPIDSVRSITNHSTGHLGKIITETFLSA--GHEVTLVTTKRA-LK-------P-EPHPNLSIREIETTKDLLITLKELV 78 (227)
T ss_pred cCCCCCceeecCCcccHHHHHHHHHHHHC--CCEEEEEcChhh-cc-------c-ccCCcceeecHHHHHHHHHHHHHHc
Confidence 44455556666667899999999999998 899999876311 10 0 011347888877666543
Q ss_pred cCccEEEecCCCC
Q 014177 107 RDVDLVVHAAGPF 119 (429)
Q Consensus 107 ~~~DvVi~~agp~ 119 (429)
.++|++||+||..
T Consensus 79 g~iDiLVnnAgv~ 91 (227)
T TIGR02114 79 QEHDILIHSMAVS 91 (227)
T ss_pred CCCCEEEECCEec
Confidence 3689999999864
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.014 Score=54.43 Aligned_cols=121 Identities=20% Similarity=0.171 Sum_probs=68.8
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEec----------CchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSR----------NREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R----------~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
.++++++|+|.| .|.||+.+++.|.+. +.+|+ +.|. +.+.+.+..+..+.-..+-.....+.+.+.
T Consensus 27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~--g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~ 103 (227)
T cd01076 27 IGLAGARVAIQG-FGNVGSHAARFLHEA--GAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELL 103 (227)
T ss_pred CCccCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccce
Confidence 457889999999 799999999999986 88888 6666 555555554433211111101111222222
Q ss_pred HHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 104 MALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 104 ~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
. .++|++|-|+.....++ +.+.+..+++|-=+.+..... .-.+..+++|+.++|.
T Consensus 104 ~--~~~Dvlip~a~~~~i~~-----~~~~~l~a~~I~egAN~~~t~---~a~~~L~~rGi~~~PD 158 (227)
T cd01076 104 E--LDCDILIPAALENQITA-----DNADRIKAKIIVEAANGPTTP---EADEILHERGVLVVPD 158 (227)
T ss_pred e--ecccEEEecCccCccCH-----HHHhhceeeEEEeCCCCCCCH---HHHHHHHHCCCEEECh
Confidence 2 28999999985433221 223344566664333333221 1223445677777665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0028 Score=55.63 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=50.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEE-EeeCCChHHHHHHhcCccEEEe
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFA-EVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~-~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+|.|+|| |..|.+++..|.++ +++|.+.+|+.+..+.+.+.-. +....- ...++ .+++++++++|+||-
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~--g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t--~dl~~a~~~ad~Iii 75 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADN--GHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT--TDLEEALEDADIIII 75 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHC--TEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE--SSHHHHHTT-SEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc--cCHHHHhCcccEEEe
Confidence 6899995 89999999999997 7999999999988887776432 111110 01111 236678899999998
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
+...+
T Consensus 76 avPs~ 80 (157)
T PF01210_consen 76 AVPSQ 80 (157)
T ss_dssp -S-GG
T ss_pred cccHH
Confidence 76543
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.024 Score=52.50 Aligned_cols=119 Identities=19% Similarity=0.092 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc----------hhHHHHHHHhCCCcEEE-EeeCCChHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR----------EKGAAMVSTLGKNSEFA-EVNIYNEGSL 102 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~----------~~~~~l~~~l~~~v~~~-~~Dl~d~~~l 102 (429)
.++++++|+|.| .|.+|+++++.|.+. |. .|.+.|.+. +.++...+. . .+... ..|..+.+.+
T Consensus 19 ~~l~g~~vaIqG-fGnVG~~~a~~L~~~--G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~-~-~~~~~~~~~~~~~~~l 93 (217)
T cd05211 19 DSLEGLTVAVQG-LGNVGWGLAKKLAEE--GGKVLAVSDPDGYIYDPGITTEELINYAVAL-G-GSARVKVQDYFPGEAI 93 (217)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHc--CCEEEEEEcCCCcEECCCCCHHHHHHHHHhh-C-CccccCcccccCcccc
Confidence 357889999999 799999999999997 56 455667665 444333322 1 12111 2233344444
Q ss_pred HHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 103 LMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 103 ~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
... ++|++|-||...... -+.+.+.++++|--..+..... .-.+..++.|+.++|+
T Consensus 94 ~~~--~~DVlipaA~~~~i~-----~~~a~~l~a~~V~e~AN~p~t~---~a~~~L~~~Gi~v~Pd 149 (217)
T cd05211 94 LGL--DVDIFAPCALGNVID-----LENAKKLKAKVVAEGANNPTTD---EALRILHERGIVVAPD 149 (217)
T ss_pred eec--cccEEeeccccCccC-----hhhHhhcCccEEEeCCCCCCCH---HHHHHHHHCCcEEECh
Confidence 322 899999998643321 2344556677775443322221 1123345567665553
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0071 Score=59.12 Aligned_cols=94 Identities=26% Similarity=0.232 Sum_probs=59.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+.++|.|+| +|.+|..++..|.+.+...+|++.+|++++.+...+ .+ +... .. .+..+.++++|+||.|+.
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g--~~~~---~~--~~~~~~~~~aDvViiavp 75 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LG--LGDR---VT--TSAAEAVKGADLVILCVP 75 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CC--CCce---ec--CCHHHHhcCCCEEEECCC
Confidence 347899999 699999999999986322489999999887665543 21 1100 11 123455678999999986
Q ss_pred CCCCCchHHHHHHH---HHcCCcEEEeCC
Q 014177 118 PFQQAPKCTVLEAA---IETKTAYIDVCD 143 (429)
Q Consensus 118 p~~~~~~~~v~~aa---~~~gv~~vdis~ 143 (429)
+... ..+++.. ...+...+|+++
T Consensus 76 ~~~~---~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGAS---GAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHH---HHHHHHHHhhCCCCCEEEeCcc
Confidence 5332 2333332 233444566654
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.045 Score=53.79 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--C---CcE-EEEeeCCChHHHHHHhcCcc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--K---NSE-FAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~---~v~-~~~~Dl~d~~~l~~~~~~~D 110 (429)
.+.++|.|+|+ |.+|+.++..|+..+ -.++++.|++.++++..+-++. . ... .+.. ..| .+ .++++|
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~-~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l~~AD 75 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKN-LGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DIKDSD 75 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCC-CCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-HhCCCC
Confidence 35679999996 999999999988762 1689999998876543222221 0 111 1111 123 33 568999
Q ss_pred EEEecCCCCC
Q 014177 111 LVVHAAGPFQ 120 (429)
Q Consensus 111 vVi~~agp~~ 120 (429)
+||.++|...
T Consensus 76 iVVitag~~~ 85 (319)
T PTZ00117 76 VVVITAGVQR 85 (319)
T ss_pred EEEECCCCCC
Confidence 9999997543
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.024 Score=55.08 Aligned_cols=66 Identities=23% Similarity=0.243 Sum_probs=49.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++|.|+| .|.+|..+++.|++. +++|++.+|++++.+.+.+. ... ...+..++++++|+||-|..+
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~--G~~V~v~d~~~~~~~~~~~~---g~~-------~~~s~~~~~~~aDvVi~~vp~ 67 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQ--GHQLQVFDVNPQAVDALVDK---GAT-------PAASPAQAAAGAEFVITMLPN 67 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHc---CCc-------ccCCHHHHHhcCCEEEEecCC
Confidence 5899999 699999999999987 78999999999988776542 111 112234566788888888754
|
|
| >COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.026 Score=55.26 Aligned_cols=123 Identities=17% Similarity=0.179 Sum_probs=71.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeCCChHHHH-------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL------------- 103 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~------------- 103 (429)
++++.|+|+||.||.+..+-+.+....++|+. +++|.+.+.+..+++.++. .+..|-.+...++
T Consensus 1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag~n~~~l~~q~~~f~P~~-v~~~d~~~~~~l~~~~~~~~v~~G~~ 79 (385)
T COG0743 1 MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKY-VVIADESAAKELEDLLPGTEVLVGEE 79 (385)
T ss_pred CceEEEEecCCchhHHHHHHHHhCCCcEEEEEEecCCcHHHHHHHHHHhCCce-EEecChHHHHHHHhhccCceEEecHH
Confidence 57999999999999999998887532345554 4678887777777665433 2333433333333
Q ss_pred ---HHhc--CccEEEecC-CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 104 ---MALR--DVDLVVHAA-GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 104 ---~~~~--~~DvVi~~a-gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
++.. ++|+|+|+. |..+ +.---+++++|.... ++........-.-+.+.++++|..++|
T Consensus 80 ~l~e~a~~~~~d~Vm~AivG~aG----L~pTlaAi~aGK~ia-LANKEsLV~aG~l~~~~~k~~g~~llP 144 (385)
T COG0743 80 GLCELAAEDDADVVMNAIVGAAG----LLPTLAAIKAGKTIA-LANKESLVTAGELVMDAAKESGAQLLP 144 (385)
T ss_pred HHHHHHhcCCCCEEeehhhhhcc----cHHHHHHHHcCCcee-ecchhhhhcccHHHHHHHHHcCCEEec
Confidence 3322 578999875 3332 233345567775544 332222221112334566777776654
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.024 Score=47.76 Aligned_cols=46 Identities=26% Similarity=0.357 Sum_probs=35.4
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGK 87 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~ 87 (429)
|.|+|+||-||++..+-+.+....++|+. +++|.+++.+...++.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p 48 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKP 48 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCC
Confidence 68999999999999999988533467765 45788888877777653
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0066 Score=58.03 Aligned_cols=101 Identities=21% Similarity=0.229 Sum_probs=72.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
...+|.|+|| |++|.+.++...-. +.+|++.++|.++++.+...+..++..+ .++...+++.+++.|+||++.-
T Consensus 167 ~~~kv~iiGG-GvvgtnaAkiA~gl--gA~Vtild~n~~rl~~ldd~f~~rv~~~---~st~~~iee~v~~aDlvIgaVL 240 (371)
T COG0686 167 LPAKVVVLGG-GVVGTNAAKIAIGL--GADVTILDLNIDRLRQLDDLFGGRVHTL---YSTPSNIEEAVKKADLVIGAVL 240 (371)
T ss_pred CCccEEEECC-ccccchHHHHHhcc--CCeeEEEecCHHHHhhhhHhhCceeEEE---EcCHHHHHHHhhhccEEEEEEE
Confidence 3467999994 99999999998876 8999999999999999887776665544 3556778999999999999873
Q ss_pred CCCCCch---HHHHHHHHHcCCcEEEeCCC
Q 014177 118 PFQQAPK---CTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 118 p~~~~~~---~~v~~aa~~~gv~~vdis~~ 144 (429)
....... .+-+-.-.+.|.-.||++-+
T Consensus 241 IpgakaPkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence 2221111 11122234556667777644
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.027 Score=54.78 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=57.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.++| .|.+|+.+++.|.+. +++|++.+|++++.+.+.+ . ... . ..+.+++.+..+++|+||.|..+.
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~-~--g~~--~--~~s~~~~~~~~~~advVi~~vp~~ 70 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLRED--GHEVVGYDVNQEAVDVAGK-L--GIT--A--RHSLEELVSKLEAPRTIWVMVPAG 70 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH-C--CCe--e--cCCHHHHHHhCCCCCEEEEEecCc
Confidence 3799998 799999999999986 7899999999988877653 1 111 1 123333222223368888887543
Q ss_pred CCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 120 QQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 120 ~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
.. ...+++... +.|.-+||.++.
T Consensus 71 ~~--~~~v~~~i~~~l~~g~ivid~st~ 96 (299)
T PRK12490 71 EV--TESVIKDLYPLLSPGDIVVDGGNS 96 (299)
T ss_pred hH--HHHHHHHHhccCCCCCEEEECCCC
Confidence 11 123333322 234445666543
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=56.79 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
|..|+|.++| +|.+|+.+++.|++.+ ...+|++.+|+.+ +++.+...++ +... .+ ..++++++|+||
T Consensus 1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g--~~~~----~~---~~e~~~~aDvVi 70 (279)
T PRK07679 1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYG--VKGT----HN---KKELLTDANILF 70 (279)
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcC--ceEe----CC---HHHHHhcCCEEE
Confidence 3457899999 6999999999999862 1268899999764 5666655432 2211 12 334567899999
Q ss_pred ecCCCCCCCchHHHHHHHH---HcCCcEEEeCC
Q 014177 114 HAAGPFQQAPKCTVLEAAI---ETKTAYIDVCD 143 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~---~~gv~~vdis~ 143 (429)
-|..|... ..+++... ..+.-.|++..
T Consensus 71 lav~p~~~---~~vl~~l~~~~~~~~liIs~~a 100 (279)
T PRK07679 71 LAMKPKDV---AEALIPFKEYIHNNQLIISLLA 100 (279)
T ss_pred EEeCHHHH---HHHHHHHHhhcCCCCEEEEECC
Confidence 99876543 33333322 22344566643
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.016 Score=60.55 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=72.5
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE--ecCch------hHHHHHHHhCCCcEEEEeeCCChHHHHH
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG--SRNRE------KGAAMVSTLGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~--~R~~~------~~~~l~~~l~~~v~~~~~Dl~d~~~l~~ 104 (429)
|+.. +..+|+|+| .|.+|++++..|+..+.+ ++.++ |+-.. .+.+.+++.++.+.+...|.+..+++.+
T Consensus 124 F~~q-R~akVlVlG-~Gg~~s~lv~sL~~sG~~-~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~e 200 (637)
T TIGR03693 124 FELS-RNAKILAAG-SGDFLTKLVRSLIDSGFP-RFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHE 200 (637)
T ss_pred hhhh-hcccEEEEe-cCchHHHHHHHHHhcCCC-cEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHH
Confidence 3333 678999999 577999999999997422 45444 44333 2233444445567777778777888999
Q ss_pred HhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 105 ALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
.+++.|+||+.+.-+.......+-++|.+.|.+.+
T Consensus 201 v~~~~DiVi~vsDdy~~~~Lr~lN~acvkegk~~I 235 (637)
T TIGR03693 201 AFEPADWVLYVSDNGDIDDLHALHAFCKEEGKGFI 235 (637)
T ss_pred hhcCCcEEEEECCCCChHHHHHHHHHHHHcCCCeE
Confidence 99999999999864432233567788999995553
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.038 Score=57.38 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=51.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.++| .|.+|+.+++.|++. |++|.+.+|++++.+.+.+.... ....+ .-..+.+++.+.++++|+||-|..
T Consensus 6 ~~~IG~IG-LG~MG~~mA~nL~~~--G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~-~~a~s~~e~v~~l~~~dvIi~~v~ 81 (493)
T PLN02350 6 LSRIGLAG-LAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGNLPL-YGFKDPEDFVLSIQKPRSVIILVK 81 (493)
T ss_pred CCCEEEEe-eHHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHhhhhcCCccc-ccCCCHHHHHhcCCCCCEEEEECC
Confidence 45799999 899999999999997 89999999999998887753110 11100 011233444444445888888763
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0057 Score=60.02 Aligned_cols=76 Identities=25% Similarity=0.363 Sum_probs=51.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEE-----EEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEF-----AEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~-----~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
||+|.|+| +|.+|+.++..|++. +++|.+.+|++++.+.+.+... .... ....+....+..+.++++|+||
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 76 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARN--GHDVTLWARDPEQAAEINADRE-NPRYLPGIKLPDNLRATTDLAEALADADLIL 76 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCc-ccccCCCCcCCCCeEEeCCHHHHHhCCCEEE
Confidence 46899999 599999999999986 7899999999888877765311 0000 0000111123445667899999
Q ss_pred ecCCC
Q 014177 114 HAAGP 118 (429)
Q Consensus 114 ~~agp 118 (429)
-|..+
T Consensus 77 ~~v~~ 81 (325)
T PRK00094 77 VAVPS 81 (325)
T ss_pred EeCCH
Confidence 88764
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.029 Score=57.28 Aligned_cols=43 Identities=21% Similarity=0.215 Sum_probs=37.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV 82 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~ 82 (429)
|.+++|.|+| .|++|..++..|++. |++|++.|+++++.+.+.
T Consensus 1 m~~~kI~VIG-lG~~G~~~A~~La~~--G~~V~~~D~~~~~v~~l~ 43 (415)
T PRK11064 1 MSFETISVIG-LGYIGLPTAAAFASR--QKQVIGVDINQHAVDTIN 43 (415)
T ss_pred CCccEEEEEC-cchhhHHHHHHHHhC--CCEEEEEeCCHHHHHHHH
Confidence 3458999999 699999999999997 799999999999888754
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0057 Score=59.74 Aligned_cols=77 Identities=21% Similarity=0.238 Sum_probs=50.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC---cEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN---SEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~---v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++|.|+|++|.||+.++..|..++--.++++.|.+ +++..+-++..- ..... ....+++.+.++++|+||-+|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~--~~~~~~~y~~~~daDivvita 76 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTG--YLGPEELKKALKGADVVVIPA 76 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEE--ecCCCchHHhcCCCCEEEEeC
Confidence 58999998899999999999876323489999987 433322222211 11111 101123456788999999999
Q ss_pred CCCC
Q 014177 117 GPFQ 120 (429)
Q Consensus 117 gp~~ 120 (429)
|...
T Consensus 77 G~~~ 80 (310)
T cd01337 77 GVPR 80 (310)
T ss_pred CCCC
Confidence 8643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0076 Score=59.89 Aligned_cols=89 Identities=18% Similarity=0.088 Sum_probs=58.4
Q ss_pred cccccCCccCCCC--CC-CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC------CcEEEEee
Q 014177 25 ETVLDGAHFQMKN--RN-ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK------NSEFAEVN 95 (429)
Q Consensus 25 ~~~~~~~~~~~~~--~~-~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~------~v~~~~~D 95 (429)
.+..|....+..| +. ++|.|+|+ |.||+.++..|+..+-..++++.|.+.++++..+.++.. .. .+..
T Consensus 20 ~~~~~~~~~~~~m~~~~~~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~- 96 (350)
T PLN02602 20 AFFKPIHNSSPPSPTRRHTKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA- 96 (350)
T ss_pred hhhhcccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-
Confidence 3444444444434 23 69999995 999999999998764334899999998877665554431 11 1211
Q ss_pred CCChHHHHHHhcCccEEEecCCCCC
Q 014177 96 IYNEGSLLMALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 96 l~d~~~l~~~~~~~DvVi~~agp~~ 120 (429)
-.|. +.++++|+||-+||...
T Consensus 97 ~~dy----~~~~daDiVVitAG~~~ 117 (350)
T PLN02602 97 STDY----AVTAGSDLCIVTAGARQ 117 (350)
T ss_pred CCCH----HHhCCCCEEEECCCCCC
Confidence 1232 23789999999998643
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.051 Score=53.22 Aligned_cols=75 Identities=20% Similarity=0.179 Sum_probs=52.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+||.|+|+ |.||+.++..|+..+-..++++.|.+.++++..+.++.. ....+.. -.|.+ .++++|+||.
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy~----~~~~adivvi 77 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDYS----VTANSKVVIV 77 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCHH----HhCCCCEEEE
Confidence 58999995 999999999998864445899999988877665554431 1111221 12332 3789999999
Q ss_pred cCCCCC
Q 014177 115 AAGPFQ 120 (429)
Q Consensus 115 ~agp~~ 120 (429)
++|...
T Consensus 78 taG~~~ 83 (312)
T cd05293 78 TAGARQ 83 (312)
T ss_pred CCCCCC
Confidence 998643
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0057 Score=61.53 Aligned_cols=78 Identities=17% Similarity=0.185 Sum_probs=53.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+++|.|+||.|.+|..+++.|.+. |++|++.+|+.. ++..+.++++|+||-|+.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~--G~~V~~~d~~~~-----------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS--GYQVRILEQDDW-----------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC--CCeEEEeCCCcc-----------------------hhHHHHHhcCCEEEEeCc
Confidence 3478999999999999999999997 789999998521 123456678999999985
Q ss_pred CCCCCchHHHHHHHH--HcCCcEEEeCC
Q 014177 118 PFQQAPKCTVLEAAI--ETKTAYIDVCD 143 (429)
Q Consensus 118 p~~~~~~~~v~~aa~--~~gv~~vdis~ 143 (429)
+... ..+++... ..++-.+|+++
T Consensus 152 ~~~~---~~~~~~l~~l~~~~iv~Dv~S 176 (374)
T PRK11199 152 IHLT---EEVIARLPPLPEDCILVDLTS 176 (374)
T ss_pred HHHH---HHHHHHHhCCCCCcEEEECCC
Confidence 4321 23333221 22344566654
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.047 Score=56.44 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=63.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQ 121 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~ 121 (429)
|.|+| .|.+|+.+++.|++. |++|++.+|++++.+.+.+......... ...+.+++.+.++++|+||-|+.+...
T Consensus 2 IG~IG-LG~MG~~mA~nL~~~--G~~V~v~drt~~~~~~l~~~~~~g~~~~--~~~s~~e~v~~l~~~dvIil~v~~~~~ 76 (467)
T TIGR00873 2 IGVIG-LAVMGSNLALNMADH--GFTVSVYNRTPEKTDEFLAEHAKGKKIV--GAYSIEEFVQSLERPRKIMLMVKAGAP 76 (467)
T ss_pred EEEEe-eHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHhhccCCCCce--ecCCHHHHHhhcCCCCEEEEECCCcHH
Confidence 78898 799999999999997 8999999999999988876421110011 233455565566789998888754321
Q ss_pred CchHHHHHHHH---HcCCcEEEeCC
Q 014177 122 APKCTVLEAAI---ETKTAYIDVCD 143 (429)
Q Consensus 122 ~~~~~v~~aa~---~~gv~~vdis~ 143 (429)
...+++... +.|.-.||.++
T Consensus 77 --v~~Vi~~l~~~L~~g~iIID~gn 99 (467)
T TIGR00873 77 --VDAVINQLLPLLEKGDIIIDGGN 99 (467)
T ss_pred --HHHHHHHHHhhCCCCCEEEECCC
Confidence 134444332 34555677764
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.011 Score=57.02 Aligned_cols=82 Identities=15% Similarity=0.257 Sum_probs=58.2
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
.+...+.+++|+|+|++|.+|+.++..|.+. +..|+++.|... .+.+.++++|+
T Consensus 152 ~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~--gatVtv~~~~t~------------------------~L~~~~~~aDI 205 (283)
T PRK14192 152 AYNIELAGKHAVVVGRSAILGKPMAMMLLNA--NATVTICHSRTQ------------------------NLPELVKQADI 205 (283)
T ss_pred HcCCCCCCCEEEEECCcHHHHHHHHHHHHhC--CCEEEEEeCCch------------------------hHHHHhccCCE
Confidence 3445678899999999889999999999987 678998876321 24445578999
Q ss_pred EEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 112 VVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 112 Vi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
|||+.|-.. .+-...++.|.-.+|+..+
T Consensus 206 vI~AtG~~~-----~v~~~~lk~gavViDvg~n 233 (283)
T PRK14192 206 IVGAVGKPE-----LIKKDWIKQGAVVVDAGFH 233 (283)
T ss_pred EEEccCCCC-----cCCHHHcCCCCEEEEEEEe
Confidence 999996221 2222335666667777643
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.026 Score=58.56 Aligned_cols=101 Identities=21% Similarity=0.309 Sum_probs=67.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC--------------hH---
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN--------------EG--- 100 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d--------------~~--- 100 (429)
...+++|+| +|.+|...+..+... |..|++.+++.++++.... ++ .+++..|..+ ..
T Consensus 163 p~akVlViG-aG~iGl~Aa~~ak~l--GA~V~v~d~~~~rle~a~~-lG--a~~v~v~~~e~g~~~~gYa~~~s~~~~~~ 236 (511)
T TIGR00561 163 PPAKVLVIG-AGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQS-MG--AEFLELDFKEEGGSGDGYAKVMSEEFIAA 236 (511)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-cC--CeEEeccccccccccccceeecCHHHHHH
Confidence 457999999 599999999999887 7789999999987665543 53 4555555421 11
Q ss_pred ---HHHHHhcCccEEEecC---CC-CCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 101 ---SLLMALRDVDLVVHAA---GP-FQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 101 ---~l~~~~~~~DvVi~~a---gp-~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.+.+.++++|+||+++ |- ....-+... -...+.|...+|++.+.
T Consensus 237 ~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~em-v~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 237 EMELFAAQAKEVDIIITTALIPGKPAPKLITEEM-VDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred HHHHHHHHhCCCCEEEECcccCCCCCCeeehHHH-HhhCCCCCEEEEeeeCC
Confidence 1445567899999999 31 110011222 34556777889998654
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.025 Score=58.82 Aligned_cols=91 Identities=24% Similarity=0.211 Sum_probs=58.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.+.+++|+|+|+ |.+|..+++.|.++ |++|++.+++.. ....+.+.+. ..+++...+-.. ...++|+||
T Consensus 13 ~~~~~~v~viG~-G~~G~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv 83 (480)
T PRK01438 13 DWQGLRVVVAGL-GVSGFAAADALLEL--GARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVV 83 (480)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEE
Confidence 466789999995 78999999999987 789999986543 2222223222 235554332111 234799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcE
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
-+.|.... .+++..|.+.|++.
T Consensus 84 ~s~Gi~~~---~~~~~~a~~~gi~v 105 (480)
T PRK01438 84 TSPGWRPD---APLLAAAADAGIPV 105 (480)
T ss_pred ECCCcCCC---CHHHHHHHHCCCee
Confidence 88875443 34555555555543
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.037 Score=53.42 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=56.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch---------------------hHHHHHH---HhCCCcEE--EEe
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE---------------------KGAAMVS---TLGKNSEF--AEV 94 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~---------------------~~~~l~~---~l~~~v~~--~~~ 94 (429)
+|+|+|+ |.+|+.+++.|+..+-+ +++++|.+.- |++..++ ++.+.++. +..
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg-~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~ 78 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVR-HITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVL 78 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeee
Confidence 5899996 66999999999997433 7888774321 1111222 22223332 222
Q ss_pred eC----------------CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEE
Q 014177 95 NI----------------YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID 140 (429)
Q Consensus 95 Dl----------------~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd 140 (429)
.+ .+.+.+.++++++|+||.|...+... .-+-.+|.+.++..++
T Consensus 79 ~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tDn~esR--~L~~~~~~~~~k~~I~ 138 (307)
T cd01486 79 SIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTDSRESR--WLPTLLSAAKNKLVIN 138 (307)
T ss_pred eccccccccccccccccccCHHHHHHHHhhCCEEEECCCCHHHH--HHHHHHHHHhCCcEEE
Confidence 22 24556777777888888887544321 3344566666666664
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0081 Score=59.05 Aligned_cols=80 Identities=16% Similarity=0.053 Sum_probs=51.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-----eEEEEecCc--hhHHHHHHHhCCCc-EEEE-eeCCChHHHHHHhcCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-----QIVVGSRNR--EKGAAMVSTLGKNS-EFAE-VNIYNEGSLLMALRDV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-----~v~v~~R~~--~~~~~l~~~l~~~v-~~~~-~Dl~d~~~l~~~~~~~ 109 (429)
+.+|.|+|++|.||+.++..|..++--. ++++.|.+. ++++..+.++..-. .... ..+. ....+.++++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da 80 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDPEEAFKDV 80 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cChHHHhCCC
Confidence 4689999998999999999998763222 799999854 44554443332111 0000 0111 1224567899
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+||.+||...
T Consensus 81 DvVVitAG~~~ 91 (323)
T TIGR01759 81 DAALLVGAFPR 91 (323)
T ss_pred CEEEEeCCCCC
Confidence 99999998643
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.015 Score=53.12 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=33.1
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecC
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRN 74 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~ 74 (429)
.++.++.++|+|+|+ |.+|+.++..|++. |+ ++++.|++
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~--Gvg~i~lvD~D 54 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARA--GIGKLILVDFD 54 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHc--CCCEEEEECCC
Confidence 455678899999996 66999999999997 66 79999887
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.014 Score=59.28 Aligned_cols=68 Identities=22% Similarity=0.173 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|+|+| +|.+|+.+++.|... |.+|++.++++.+...... . .++. .+ ++++++++|+||.+.
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~--Ga~ViV~d~dp~ra~~A~~-~--G~~v-----~~---l~eal~~aDVVI~aT 275 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGL--GARVIVTEVDPICALQAAM-D--GFRV-----MT---MEEAAELGDIFVTAT 275 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC--CCEEEEEcCCchhhHHHHh-c--CCEe-----cC---HHHHHhCCCEEEECC
Confidence 5789999999 699999999999987 7899999999877543322 1 2221 12 345677999999987
Q ss_pred CC
Q 014177 117 GP 118 (429)
Q Consensus 117 gp 118 (429)
|.
T Consensus 276 G~ 277 (425)
T PRK05476 276 GN 277 (425)
T ss_pred CC
Confidence 63
|
|
| >PRK10206 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.1 Score=51.93 Aligned_cols=143 Identities=13% Similarity=0.062 Sum_probs=81.8
Q ss_pred CeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 40 ARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
.||.|+| +|.++. ..+..+....++++++ ++++++++. +..+.++ .+ .. .++++++++ ++|+|+.|
T Consensus 2 irvgiiG-~G~~~~~~h~~~~~~~~~~~~l~av~d~~~~~~-~~~~~~~-~~-----~~--~~~~~ell~~~~iD~V~I~ 71 (344)
T PRK10206 2 INCAFIG-FGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQAPIYS-HI-----HF--TSDLDEVLNDPDVKLVVVC 71 (344)
T ss_pred eEEEEEC-CCHHHhheehhhHhcCCCCEEEEEEEcCChhHH-HHHHhcC-CC-----cc--cCCHHHHhcCCCCCEEEEe
Confidence 5899999 587765 3345454433467775 567776543 4444332 11 11 123455564 78999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
..+... ..++..|+++|.|.+- ++.+ ......+.+.++++|+.+..+.-.-+...-..++.+++. -..
T Consensus 72 tp~~~H---~~~~~~al~aGkhVl~EKPla~~---~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~li~~---g~i 142 (344)
T PRK10206 72 THADSH---FEYAKRALEAGKNVLVEKPFTPT---LAEAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIES---GKL 142 (344)
T ss_pred CCchHH---HHHHHHHHHcCCcEEEecCCcCC---HHHHHHHHHHHHHhCCEEEEEEeeeECHHHHHHHHHHHc---CCC
Confidence 765433 6889999999988762 1111 234446667788888876655332233333344555542 234
Q ss_pred CCCeEEEEE
Q 014177 193 GEPERLRFS 201 (429)
Q Consensus 193 ~~v~~i~~~ 201 (429)
.++..++..
T Consensus 143 G~i~~i~~~ 151 (344)
T PRK10206 143 GEIVEVESH 151 (344)
T ss_pred CCeEEEEEE
Confidence 455556553
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.024 Score=57.44 Aligned_cols=68 Identities=21% Similarity=0.245 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|+|+| +|.||+.+++.+... |.+|++.++++.++.... ..+ ++.. + +++.++++|+||.|+
T Consensus 200 l~GktVvViG-~G~IG~~va~~ak~~--Ga~ViV~d~d~~R~~~A~-~~G--~~~~-----~---~~e~v~~aDVVI~at 265 (413)
T cd00401 200 IAGKVAVVAG-YGDVGKGCAQSLRGQ--GARVIVTEVDPICALQAA-MEG--YEVM-----T---MEEAVKEGDIFVTTT 265 (413)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEECChhhHHHHH-hcC--CEEc-----c---HHHHHcCCCEEEECC
Confidence 5678999999 689999999999886 789999999988765433 222 3222 1 234567899999987
Q ss_pred CC
Q 014177 117 GP 118 (429)
Q Consensus 117 gp 118 (429)
|.
T Consensus 266 G~ 267 (413)
T cd00401 266 GN 267 (413)
T ss_pred CC
Confidence 63
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK06270 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.18 Score=50.05 Aligned_cols=127 Identities=20% Similarity=0.183 Sum_probs=71.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHc--------CCCceEE-EEecC----------chhHHHHHHHhCCCcEEEEeeCCCh
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKL--------CPDLQIV-VGSRN----------REKGAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~--------~~g~~v~-v~~R~----------~~~~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
..+|.|+| +|.||+.+++.|.++ +.+.+|+ +++++ .+++....+..+ .+.... +....
T Consensus 2 ~i~V~IiG-~G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~-~~~~~~-~~~~~ 78 (341)
T PRK06270 2 EMKIALIG-FGGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETG-KLADYP-EGGGE 78 (341)
T ss_pred eEEEEEEC-CCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccC-CcccCc-ccccc
Confidence 46899999 699999999998764 1145554 34542 222222222211 111000 00001
Q ss_pred HHHHHHhc--CccEEEecCCCCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC
Q 014177 100 GSLLMALR--DVDLVVHAAGPFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 100 ~~l~~~~~--~~DvVi~~agp~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~ 169 (429)
.++.+++. ++|+||.|.++... ......+..|+++|+|.|-.+- .........+.+.++++|..+...+
T Consensus 79 ~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK-~pla~~~~eL~~~A~~~g~~~~~ea 151 (341)
T PRK06270 79 ISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNK-GPLALAYKELKELAKKNGVRFRYEA 151 (341)
T ss_pred CCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCc-HHHHhhHHHHHHHHHHcCCEEEEee
Confidence 12344453 68999999875321 1125678899999999884432 1111223466777888888776543
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0084 Score=58.82 Aligned_cols=77 Identities=27% Similarity=0.309 Sum_probs=53.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc---EEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS---EFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v---~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.++||.|+|+ |.||+.++..|..++--.++.+.|++.++++..+.++..-. .-...-..+. +.++++|+||.
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~----~~~~~adivIi 79 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDY----SDCKDADLVVI 79 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCH----HHhCCCCEEEE
Confidence 3479999997 99999999999886322289999999988776665553110 0011111232 34789999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++|..
T Consensus 80 tag~~ 84 (315)
T PRK00066 80 TAGAP 84 (315)
T ss_pred ecCCC
Confidence 99864
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0089 Score=57.59 Aligned_cols=68 Identities=25% Similarity=0.302 Sum_probs=49.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+| .|.+|..++..|.+. +++|++.+|+++..+...+. + .+.. ...+ . +.++++|+||-|..+.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~--g~~V~~~d~~~~~~~~a~~~-g-~~~~---~~~~---~-~~~~~aDlVilavp~~ 68 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSL--GHTVYGVSRRESTCERAIER-G-LVDE---ASTD---L-SLLKDCDLVILALPIG 68 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHC-C-Cccc---ccCC---H-hHhcCCCEEEEcCCHH
Confidence 4799999 799999999999987 78999999998877765542 1 1110 0111 2 2467899999998653
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.018 Score=51.91 Aligned_cols=71 Identities=11% Similarity=0.129 Sum_probs=40.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH----HHHHhcCccEEEecC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS----LLMALRDVDLVVHAA 116 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~----l~~~~~~~DvVi~~a 116 (429)
|.+=--.+|..|.++++.+..+ |++|+++..... +. .+..++.+. +...++ +.+.+.++|++|++|
T Consensus 21 R~ItN~SSG~~G~~lA~~~~~~--Ga~V~li~g~~~-~~-----~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~aA 90 (185)
T PF04127_consen 21 RFITNRSSGKMGAALAEEAARR--GAEVTLIHGPSS-LP-----PPPGVKVIR--VESAEEMLEAVKELLPSADIIIMAA 90 (185)
T ss_dssp EEEEES--SHHHHHHHHHHHHT--T-EEEEEE-TTS----------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-S
T ss_pred eEecCCCcCHHHHHHHHHHHHC--CCEEEEEecCcc-cc-----ccccceEEE--ecchhhhhhhhccccCcceeEEEec
Confidence 3333345789999999999998 899998876532 11 123455554 444444 444455799999999
Q ss_pred CCCCC
Q 014177 117 GPFQQ 121 (429)
Q Consensus 117 gp~~~ 121 (429)
++...
T Consensus 91 AVsDf 95 (185)
T PF04127_consen 91 AVSDF 95 (185)
T ss_dssp B--SE
T ss_pred chhhe
Confidence 87543
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.024 Score=59.94 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=30.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
+.++..+|+|+|+ |.+|+.+++.|+..+-+ +++++|.+
T Consensus 334 ekL~~~kVLIvGa-GGLGs~VA~~La~~GVg-~ItlVD~D 371 (664)
T TIGR01381 334 ERYSQLKVLLLGA-GTLGCNVARCLIGWGVR-HITFVDNG 371 (664)
T ss_pred HHHhcCeEEEECC-cHHHHHHHHHHHHcCCC-eEEEEcCC
Confidence 5577889999996 66999999999998432 78888754
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.044 Score=52.65 Aligned_cols=66 Identities=24% Similarity=0.351 Sum_probs=48.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++|.++| .|.+|...+..|++. |+++++.+|++++..+.....+. .. .++..++.+++|+||.|..
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~a--G~~v~v~~r~~~ka~~~~~~~Ga--~~-------a~s~~eaa~~aDvVitmv~ 66 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKA--GHEVTVYNRTPEKAAELLAAAGA--TV-------AASPAEAAAEADVVITMLP 66 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHC--CCEEEEEeCChhhhhHHHHHcCC--cc-------cCCHHHHHHhCCEEEEecC
Confidence 4789999 899999999999998 89999999999995444433221 11 1223456667888888764
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.019 Score=46.52 Aligned_cols=85 Identities=22% Similarity=0.179 Sum_probs=56.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++++|+|+|| |-+|..-++.|++. |.+|++.+.+.+ ... +.+++..-++ ++.+++.|+||-+
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~--gA~v~vis~~~~---~~~----~~i~~~~~~~------~~~l~~~~lV~~a 67 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEA--GAKVTVISPEIE---FSE----GLIQLIRREF------EEDLDGADLVFAA 67 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCC--TBEEEEEESSEH---HHH----TSCEEEESS-------GGGCTTESEEEE-
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEECCchh---hhh----hHHHHHhhhH------HHHHhhheEEEec
Confidence 367899999996 88999999999997 799999988761 111 3566554443 2347789999977
Q ss_pred CCCCCCCchHHHHHHHHHcCCcE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
.+.... +..+.+.|.+.++..
T Consensus 68 t~d~~~--n~~i~~~a~~~~i~v 88 (103)
T PF13241_consen 68 TDDPEL--NEAIYADARARGILV 88 (103)
T ss_dssp SS-HHH--HHHHHHHHHHTTSEE
T ss_pred CCCHHH--HHHHHHHHhhCCEEE
Confidence 543221 256777787777544
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.01 Score=58.03 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=50.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC--cE--EEEeeC-CChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN--SE--FAEVNI-YNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~--v~--~~~~Dl-~d~~~l~~~~~~~DvVi 113 (429)
|++|.|+|+ |.+|+.++..++..+-+ +|++.|+++++++.....+... .. ...+.. .| . +.++++|+||
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d---~-~~~~~aDiVi 75 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTND---Y-EDIAGSDVVV 75 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCC---H-HHHCCCCEEE
Confidence 479999997 99999999999886323 9999999888765543322110 00 011111 23 2 2468999999
Q ss_pred ecCCCCC
Q 014177 114 HAAGPFQ 120 (429)
Q Consensus 114 ~~agp~~ 120 (429)
.++|...
T Consensus 76 i~~~~p~ 82 (307)
T PRK06223 76 ITAGVPR 82 (307)
T ss_pred ECCCCCC
Confidence 9987533
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.022 Score=54.69 Aligned_cols=81 Identities=17% Similarity=0.270 Sum_probs=60.5
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.-++.+++|+|+|.++.+|+.++..|.++ +..|+++.++. ..+.+.++++|+||
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~--gatVtv~~s~t------------------------~~l~~~~~~ADIVI 206 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQK--NASVTILHSRS------------------------KDMASYLKDADVIV 206 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCCc------------------------hhHHHHHhhCCEEE
Confidence 34588999999999889999999999987 78999887532 13667788999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.++|-..... ..-++.|.-.||++...
T Consensus 207 sAvg~p~~i~-----~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 207 SAVGKPGLVT-----KDVVKEGAVIIDVGNTP 233 (286)
T ss_pred ECCCCCcccC-----HHHcCCCcEEEEcCCCc
Confidence 9997543211 12245676778887654
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.06 Score=56.05 Aligned_cols=102 Identities=19% Similarity=0.276 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh-------------H---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE-------------G--- 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~-------------~--- 100 (429)
..+.+|+|+|+ |-+|...+..+... |.+|++.|+++++++... +++ .+++..|..+. +
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~l--GA~V~a~D~~~~rle~ae-slG--A~~v~i~~~e~~~~~~gya~~~s~~~~~ 236 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSL--GAIVRAFDTRPEVAEQVE-SMG--AEFLELDFEEEGGSGDGYAKVMSEEFIK 236 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH-HcC--CeEEEeccccccccccchhhhcchhHHH
Confidence 34689999995 88999999998886 789999999999877554 454 34444443221 1
Q ss_pred H----HHHHhcCccEEEecCCCCCCCchHHHHHHH---HHcCCcEEEeCCC
Q 014177 101 S----LLMALRDVDLVVHAAGPFQQAPKCTVLEAA---IETKTAYIDVCDD 144 (429)
Q Consensus 101 ~----l~~~~~~~DvVi~~agp~~~~~~~~v~~aa---~~~gv~~vdis~~ 144 (429)
. +.+..+++|+||.|++........-+.+.+ .+.|...+|++.+
T Consensus 237 ~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 237 AEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 1 122235799999999743211101112333 3456778888754
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0096 Score=58.43 Aligned_cols=94 Identities=24% Similarity=0.302 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
..++++|+| +|.+|+..++.+....+..+|.+.+|++++.+++.+++.. ...... .++.+++++++|+|++|.
T Consensus 124 ~~~~v~iiG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-----~~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 124 DASRLLVVG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-----VTDLEAAVRQADIISCAT 197 (314)
T ss_pred CCceEEEEC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-----eCCHHHHHhcCCEEEEee
Confidence 457899999 6889999998776633457899999999999998887642 111221 233556778999998876
Q ss_pred CCCCCCchHHHHH-HHHHcCCcEEEeCC
Q 014177 117 GPFQQAPKCTVLE-AAIETKTAYIDVCD 143 (429)
Q Consensus 117 gp~~~~~~~~v~~-aa~~~gv~~vdis~ 143 (429)
... .++++ ..++.|. .|+..+
T Consensus 198 ~s~-----~pvl~~~~l~~g~-~i~~ig 219 (314)
T PRK06141 198 LST-----EPLVRGEWLKPGT-HLDLVG 219 (314)
T ss_pred CCC-----CCEecHHHcCCCC-EEEeeC
Confidence 522 23332 3456677 454443
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0064 Score=59.45 Aligned_cols=75 Identities=21% Similarity=0.248 Sum_probs=49.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH-------h-C-CCcE-----EEEeeCCChHHHHHH
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST-------L-G-KNSE-----FAEVNIYNEGSLLMA 105 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~-------l-~-~~v~-----~~~~Dl~d~~~l~~~ 105 (429)
++|.|+| .|.+|+.++..|++. |++|++.+|++++.+...+. + . +.+. .....+.-..++.++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~--G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARA--GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHC--CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 5899999 699999999999997 89999999998776653321 1 0 0000 000001111235566
Q ss_pred hcCccEEEecCC
Q 014177 106 LRDVDLVVHAAG 117 (429)
Q Consensus 106 ~~~~DvVi~~ag 117 (429)
++++|+|+.|..
T Consensus 80 ~~~ad~Vi~avp 91 (308)
T PRK06129 80 VADADYVQESAP 91 (308)
T ss_pred hCCCCEEEECCc
Confidence 788999998874
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.013 Score=57.71 Aligned_cols=77 Identities=25% Similarity=0.275 Sum_probs=52.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+|+|.|+| +|.+|..++..|.+. +++|++.+|++++.+.+...... .... ...+.-..++.+.++++|+||
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~--G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~-~~~~~~~~~~~e~~~~aD~Vi 79 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASK--GVPVRLWARRPEFAAALAAERENREYLPGVAL-PAELYPTADPEEALAGADFAV 79 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhCcccccCCCCcC-CCCeEEeCCHHHHHcCCCEEE
Confidence 35899999 599999999999987 78999999998887777643110 1000 000111123445667899999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
-|....
T Consensus 80 ~~v~~~ 85 (328)
T PRK14618 80 VAVPSK 85 (328)
T ss_pred EECchH
Confidence 887543
|
|
| >TIGR01761 thiaz-red thiazolinyl imide reductase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.065 Score=53.11 Aligned_cols=114 Identities=13% Similarity=0.132 Sum_probs=75.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-CceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-DLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
..+|.|+|+ |+ |+.-++.+.+. + +++++ +++++.+++++++++++ +. . .+| ++++++++|+++-+.
T Consensus 3 ~~rVgViG~-~~-G~~h~~al~~~-~~~~eLvaV~d~~~erA~~~A~~~g--i~-~---y~~---~eell~d~Di~~V~i 70 (343)
T TIGR01761 3 VQSVVVCGT-RF-GQFYLAAFAAA-PERFELAGILAQGSERSRALAHRLG--VP-L---YCE---VEELPDDIDIACVVV 70 (343)
T ss_pred CcEEEEEeH-HH-HHHHHHHHHhC-CCCcEEEEEEcCCHHHHHHHHHHhC--CC-c---cCC---HHHHhcCCCEEEEEe
Confidence 478999997 75 98888888774 4 56665 56899999999988775 22 1 234 445566666555443
Q ss_pred C---CCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 117 G---PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 117 g---p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
. |... . ..++.+|+++|+|.+-= .+-...+...+-+.++++|+.+..+
T Consensus 71 pt~~P~~~-H-~e~a~~aL~aGkHVL~E--KPla~~Ea~el~~~A~~~g~~l~v~ 121 (343)
T TIGR01761 71 RSAIVGGQ-G-SALARALLARGIHVLQE--HPLHPRDIQDLLRLAERQGRRYLVN 121 (343)
T ss_pred CCCCCCcc-H-HHHHHHHHhCCCeEEEc--CCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 2 2111 2 68899999999987621 1111345557777888888877653
|
This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG). |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.04 Score=54.32 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=62.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh---HHHHHHh-cCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE---GSLLMAL-RDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~---~~l~~~~-~~~DvVi~ 114 (429)
.+|+|.||+|.+|..+++.+... |. +|++.+++.++.+.+.++++. +. ..|..+. +.+.++. +++|+|++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~--G~~~Vi~~~~s~~~~~~~~~~lGa--~~-vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLL--GCSRVVGICGSDEKCQLLKSELGF--DA-AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhcCC--cE-EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 79999999999999999877765 77 799888888887776665542 22 2333332 2233332 36999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++|... ..-.-.|++.+-+++.++
T Consensus 231 ~~g~~~----~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 231 NVGGEI----SDTVISQMNENSHIILCG 254 (345)
T ss_pred CCCcHH----HHHHHHHhccCCEEEEEe
Confidence 987421 122234556666777654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0068 Score=59.34 Aligned_cols=75 Identities=31% Similarity=0.404 Sum_probs=48.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCC-----CcEEEEeeCCChHHHHHHhcCccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGK-----NSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~-----~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
|+|.|+|++|.+|+.++..|+..+...+|+++||+. ++++.....+.. ... ..+..++. . +.++++|+|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d--~-~~l~~aDiV 76 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD--L-SDVAGSDIV 76 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC--H-HHhCCCCEE
Confidence 589999999999999999999873233699999954 444433222211 111 12222211 2 247899999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|-++|.
T Consensus 77 iitag~ 82 (309)
T cd05294 77 IITAGV 82 (309)
T ss_pred EEecCC
Confidence 999984
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.016 Score=57.63 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=52.5
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
..+.+++++|+| .|.||+.+++.|... |.+|++.+|+..+.......++ ..+...........+++++++++|+|+
T Consensus 155 ~~l~gktvGIiG-~G~IG~~vA~~l~af--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVv 231 (347)
T PLN02928 155 DTLFGKTVFILG-YGAIGIELAKRLRPF--GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVV 231 (347)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhhC--CCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEE
Confidence 458899999999 799999999999876 8999999987432111000000 000000001113456889999999999
Q ss_pred ecCC
Q 014177 114 HAAG 117 (429)
Q Consensus 114 ~~ag 117 (429)
.++.
T Consensus 232 l~lP 235 (347)
T PLN02928 232 LCCT 235 (347)
T ss_pred ECCC
Confidence 9874
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.044 Score=57.19 Aligned_cols=89 Identities=21% Similarity=0.227 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|+|+| .|..|..+++.|.++ |++|++.|+++...+.+.+ . .+.+...+ +. .+.++++|+||...
T Consensus 10 ~~~~~v~V~G-~G~sG~aa~~~L~~~--G~~v~~~D~~~~~~~~l~~-~--g~~~~~~~--~~---~~~l~~~D~VV~Sp 78 (488)
T PRK03369 10 LPGAPVLVAG-AGVTGRAVLAALTRF--GARPTVCDDDPDALRPHAE-R--GVATVSTS--DA---VQQIADYALVVTSP 78 (488)
T ss_pred cCCCeEEEEc-CCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHh-C--CCEEEcCc--ch---HhHhhcCCEEEECC
Confidence 4568999999 588999999988887 8999999977655444322 2 34443221 11 22356789999988
Q ss_pred CCCCCCchHHHHHHHHHcCCcEE
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~v 139 (429)
|.... .+.++++.+.|++.+
T Consensus 79 Gi~~~---~p~~~~a~~~gi~v~ 98 (488)
T PRK03369 79 GFRPT---APVLAAAAAAGVPIW 98 (488)
T ss_pred CCCCC---CHHHHHHHHCCCcEe
Confidence 75443 467777777776554
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.039 Score=56.62 Aligned_cols=69 Identities=23% Similarity=0.257 Sum_probs=51.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+.+++|+|+| +|.||+.+++.|... |.+|++.++++.+...... ..++.. .+.++++.+|+||.+
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~--Ga~ViV~e~dp~~a~~A~~---~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGF--GARVVVTEIDPICALQAAM---EGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHh---cCceec--------cHHHHHhcCCEEEEC
Confidence 57889999999 789999999999886 8899999888766432221 122221 255677899999998
Q ss_pred CCC
Q 014177 116 AGP 118 (429)
Q Consensus 116 agp 118 (429)
.|.
T Consensus 317 tGt 319 (476)
T PTZ00075 317 TGN 319 (476)
T ss_pred CCc
Confidence 763
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.037 Score=57.30 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=61.3
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
.+.+.+++|+|+| .|..|..+++.|.+. |++|++.|++.. ......+.+. ..+.+...+-. . +.+.++|+
T Consensus 9 ~~~~~~~~i~v~G-~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~-~----~~~~~~dl 80 (458)
T PRK01710 9 KKFIKNKKVAVVG-IGVSNIPLIKFLVKL--GAKVTAFDKKSEEELGEVSNELKELGVKLVLGENY-L----DKLDGFDV 80 (458)
T ss_pred hhhhcCCeEEEEc-ccHHHHHHHHHHHHC--CCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCC-h----HHhccCCE
Confidence 3346778999999 688999999999987 899999997643 1111111121 23444433221 1 23467999
Q ss_pred EEecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 112 VVHAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 112 Vi~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
||...|.... .+.+.+|.+.|++.+
T Consensus 81 VV~Spgi~~~---~p~~~~a~~~~i~i~ 105 (458)
T PRK01710 81 IFKTPSMRID---SPELVKAKEEGAYIT 105 (458)
T ss_pred EEECCCCCCC---chHHHHHHHcCCcEE
Confidence 9998664432 467777877776654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 83.7 bits (206), Expect = 1e-17
Identities = 47/274 (17%), Positives = 89/274 (32%), Gaps = 28/274 (10%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV 94
KN VL+LG +G V L+ D+ + V R A+ S+ +
Sbjct: 23 GKN----VLLLG-SGFVAQPVIDTLAAN-DDINVTVACRTLANAQALAK--PSGSKAISL 74
Query: 95 NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSF 154
++ ++ +L L D D+V+ P+ P V+++AI TKT + S +
Sbjct: 75 DVTDDSALDKVLADNDVVIS-LIPYTFHP--NVVKSAIRTKTDVVTSSYI---SPALREL 128
Query: 155 KDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA---- 210
+ + A I + G+ PG+ ++ A + + F Y G
Sbjct: 129 EPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVHRAGGKL---KSFLSYCGGLPAPEDSD 185
Query: 211 GPTILATSFLLLG------EEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPE 264
P S+ G + G+ T+ M + +
Sbjct: 186 NPLGYKFSWSSRGVLLALRNSAKYWKDGKIETVSSEDLMATAKPYFIYPGYAFVCYPNRD 245
Query: 265 VRSAREVLGVPTV-SARFGTAPFFWNWGMVTMQR 297
+++ +P + GT + V
Sbjct: 246 STLFKDLYHIPEAETVIRGTLRYQGFPEFVKALV 279
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 83.4 bits (205), Expect = 2e-17
Identities = 51/343 (14%), Positives = 104/343 (30%), Gaps = 35/343 (10%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV 94
K VL+LG +G V T L+ +++ V R E + + + ++S +
Sbjct: 3 TK----SVLMLG-SGFVTRPTLDVLTD--SGIKVTVACRTLESAKKLSAGV-QHSTPISL 54
Query: 95 NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSF 154
++ ++ +L + DLV+ P+ TV+++AI K + S
Sbjct: 55 DVNDDAALDAEVAKHDLVISLI-PYTFHA--TVIKSAIRQKKHVVTTSYV---SPAMMEL 108
Query: 155 KDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE-RLRFSYYTAGTGGAGPT 213
A A I + G+ PG+ ++ A + + A P
Sbjct: 109 DQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLPAPESSDNPL 168
Query: 214 ILATSFLLLG------EEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRS 267
S+ G Y G+ + M + +
Sbjct: 169 GYKFSWSSRGVLLALRNAASFYKDGKVTNVAGPELMATAKPYFIYPGFAFVAYPNRDSTP 228
Query: 268 AREVLGVPTV------SARFGTAPFFWN-WGMVTMQRLFPAEYLRDRSKVQQLVQLFDPV 320
+E +P + R+ P F + +L++ ++ Q
Sbjct: 229 YKERYQIPEADNIVRGTLRYQGFPQFIKVLVDIGFLSDEEQPFLKEAIPWKEATQKIVKA 288
Query: 321 VRAFDGIAGERVSMRV-------DLECTDGRNTVGIFSHRRLS 356
A + + G +GIFS ++++
Sbjct: 289 SSASEQDIVSTIVSNATFESTEEQKRIVAGLKWLGIFSDKKIT 331
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 70.6 bits (173), Expect = 4e-15
Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
+ V+G G++G A L + + V + A + +V+ +E
Sbjct: 7 NICVVGA-GKIGQMIAALLKT-SSNYSVTVADHDLAALAVL---NRMGVATKQVDAKDEA 61
Query: 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRA 158
L AL D V+ AA F + +AA Y D+ +D + ++ + +
Sbjct: 62 GLAKALGGFDAVISAAPFFLTPI---IAKAAKAAGAHYFDLTEDVAATNAVRALVEDS 116
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 5e-08
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVV----GSRNREKGAAMVSTLGKNSEFAEVNI 96
R+L++G TG +G A A L ++V S N EK + S + +I
Sbjct: 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65
Query: 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTA 137
+ SL+ A+++VD+V+ G Q + +++A E T
Sbjct: 66 DDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTV 106
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 3e-07
Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIYN 98
RVL+ G TG +G A A I+ G R+ K + K + I
Sbjct: 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE 71
Query: 99 EGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYI 139
+ ++ L+ ++D+VV G + +++A T
Sbjct: 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKR 114
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 4e-07
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 2/102 (1%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
+ +LG G++ L D+ I + R + + E + N G
Sbjct: 7 YITILGAAGQIAQXLTATLLTY-TDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPG 65
Query: 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142
L A+ + ++V A ++++A +
Sbjct: 66 XLEQAVTNAEVVFVGAMESGSDMA-SIVKALSRXNIRRVIGV 106
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 4e-07
Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 4/100 (4%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVV----GSRNREKGAAMVSTLGKNSEFAEVNI 96
++++ GGTG +G A I E +
Sbjct: 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65
Query: 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKT 136
++ L+ VD+V+ A + + ++ A
Sbjct: 66 EEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGN 105
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
VLV G +GR G L + R+ + +G ++ +I +
Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG----KEKIGGEADVFIGDITDAD 61
Query: 101 SLLMALRDVDLVVHAAG 117
S+ A + +D +V
Sbjct: 62 SINPAFQGIDALVILTS 78
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 2e-06
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 6/101 (5%)
Query: 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTLGKNSEFA 92
MK++ +L+ GGTG +G KL V +R N K + +
Sbjct: 9 GMKSK---ILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIV 63
Query: 93 EVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIE 133
+ + L+ ++ VD+V+ A Q + +LEA
Sbjct: 64 KGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKV 104
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 4e-06
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVV-----GSRNREKGAAMVSTLGKNSEFAEVN 95
++L+LG TG +G A K +V + K + + E +
Sbjct: 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63
Query: 96 IYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKT 136
I + +L+ A++ VD+V+ AAG + +++A E
Sbjct: 64 INDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGN 104
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 6e-06
Identities = 67/462 (14%), Positives = 127/462 (27%), Gaps = 153/462 (33%)
Query: 33 FQMKNRNARVLVLGGTGRVGGSTAVAL---SKLCPDLQIVVGS-RNREKGAAMVSTL--- 85
K+ + L L T V L + + ++ + ++ +M++ +
Sbjct: 55 IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114
Query: 86 ------GKNSEFAEVNIYNEGSL------LMALRDVD-LVVHA---AGPFQQAPKCTVLE 129
N FA+ N+ L+ LR +++ +G K T +
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG------K-TWV- 166
Query: 130 AAIETKTAYIDVC-DDTIYSQRAKSFK-----------DRAIAANIPAITTGGIYPGVSN 177
A DVC + Q FK + + + S
Sbjct: 167 AL--------DVCLSYKV--QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEITL 237
+ +++ + + E RL S L+L V N
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKS-----------KPYENCLLVL-LNV--QNAK---AW 259
Query: 238 EPYSG---ML------SV-DFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFF 287
++ +L V DF + L + + EV +
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL------------L 307
Query: 288 WNWGMVTMQRL-------FP------AEYLRDR-SKVQQLVQL-FDPVVRAFDGIAGERV 332
+ Q L P AE +RD + + D + +
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE------S 361
Query: 333 SMRVDLECTDGRN---TVGIFSHRRLSVSVGTAIAAFVLAVLEGATQPGVWF---PEEPE 386
S+ V LE + R + +F S I +L+++ WF +
Sbjct: 362 SLNV-LEPAEYRKMFDRLSVF---PPSAH----IPTILLSLI--------WFDVIKSDVM 405
Query: 387 GIAIEAREVLLKRASQGTINFVMNKAPWMVETEPKELGLGIY 428
+ + L + S +VE +PKE + I
Sbjct: 406 VVVNK-----LHKYS-------------LVEKQPKESTISIP 429
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 7e-06
Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 17/168 (10%)
Query: 9 NSTATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQI 68
N+TA A +A A +V + + +VL GTG VG +A L+ ++
Sbjct: 99 NTTAAAGVALVVKAAGGSV----------KGKKAVVLAGTGPVGMRSAALLAGEGAEV-- 146
Query: 69 VVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCT 126
V+ R +K A ++ K ++ S A++ V A +
Sbjct: 147 VLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLELLPQA 206
Query: 127 VLEAAIETK-TAYIDVCDDTIYSQRAKSFKDRAI--AANIPAITTGGI 171
+ + A + + K + A+ GG+
Sbjct: 207 AWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGL 254
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 18/108 (16%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
+ VLG TG +G A A+ +V+ R + + E + +
Sbjct: 15 KYAVLGATGLLGHHAARAI--RAAGHDLVLIHRPSSQIQRL---AYLEPECRVAEMLDHA 69
Query: 101 SLLMALRDVDLVVHAAGPFQQAPK-------------CTVLEAAIETK 135
L ALR +D V+ +AG + P+ A ++ +
Sbjct: 70 GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR 117
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 29/129 (22%), Positives = 44/129 (34%), Gaps = 25/129 (19%)
Query: 30 GAHFQMKN-----RNARVLVLGGTGRVGGS-TAVALSKLCPDLQIVVGSRNREKGAAMVS 83
M N N +L+ GGTG G L +I+V SR+ K + M
Sbjct: 7 HGSMSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAK-KIIVYSRDELKQSEMAM 65
Query: 84 TLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKC---------T------- 126
F ++ + L AL VD+ +HAA + P T
Sbjct: 66 EFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAA-LKHVPIAEYNPLECIKTNIMGASN 124
Query: 127 VLEAAIETK 135
V+ A ++
Sbjct: 125 VINACLKNA 133
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101
+ + G TG++G +L K P QIV RN K A+ + + + +E +
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL---AAQGITVRQADYGDEAA 58
Query: 102 LLMALRDVD--LVVHAAGPFQQAPKCT-VLEAAIE 133
L AL+ V+ L++ ++ Q+AP+ V+ AA
Sbjct: 59 LTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKA 93
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 3e-05
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVV---GSRNREKGAAMVSTLGKNSEFAEVNIY 97
RVL++GGTG +G A L ++ N +K ++ ++ E ++
Sbjct: 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 65
Query: 98 NEGSLLMALRDVDLVVHAAG----PFQQAPKCTVLEAAIE 133
+ L+ AL+ VD+V+ A + ++EA E
Sbjct: 66 DHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKE 105
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Query: 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101
+ V G TG++GG L K P QI+ RN EK + + + E + S
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA---DQGVEVRHGDYNQPES 59
Query: 102 LLMALRDVDLV-----VHAAGPFQQAPKCTVLEAAIE 133
L A V + H V++AA +
Sbjct: 60 LQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARD 96
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 4e-05
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV 94
+ VL+LG G++ L+ ++ + +R K NS+
Sbjct: 19 FQGHMKNVLILGAGGQIARHVINQLAD-KQTIKQTLFARQPAKIHKP---YPTNSQIIMG 74
Query: 95 NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCT-VLEAAIETKTAYI 139
++ N +L A++ D+V + V+ A +
Sbjct: 75 DVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRL 120
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 6e-05
Identities = 12/91 (13%), Positives = 31/91 (34%), Gaps = 5/91 (5%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
++ + G TG+ G +T + ++ V R+ + + + + ++
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAA 59
Query: 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAA 131
+ + D V+ G TV+
Sbjct: 60 DVDKTVAGQDAVIVLLGTRNDLSPTTVMSEG 90
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A Length = 283 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNI 96
+ V+ +G G VG + A AL LQ+ + + A+ + V
Sbjct: 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVAD--LDTSRAQALADVINNAVGREAVVG 182
Query: 97 YNEGSLLMALRDVDLVVHA 115
+ + + D VV+A
Sbjct: 183 VDARGIEDVIAAADGVVNA 201
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 2e-04
Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Query: 16 MASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75
MA + +K F+M+N++ V +LG +G G + + ++ + R +
Sbjct: 1 MAETEALSKLR----EDFRMQNKS--VFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54
Query: 76 EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPK 124
KN V+ A + D+ G +
Sbjct: 55 LT---FDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAG 100
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 19/102 (18%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
R+LV G G++G L+ + L++ + G N E + ++ +
Sbjct: 5 RLLVTGAAGQLGRVMRERLAPMAEILRLA----DLSPLDP----AGPNEECVQCDLADAN 56
Query: 101 SLLMALRDVDLVVH-AAGPFQQAPK----------CTVLEAA 131
++ + D +VH ++ + + EAA
Sbjct: 57 AVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAA 98
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 14/88 (15%), Positives = 35/88 (39%), Gaps = 16/88 (18%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDL-----QIVVGSRNREKGAAMVSTLGKNSEFAEVN 95
+++++G +G VG S L + ++ R+ EK + ++ + + +
Sbjct: 6 KIVLIGASGFVG-------SALLNEALNRGFEVTAVVRHPEK----IKIENEHLKVKKAD 54
Query: 96 IYNEGSLLMALRDVDLVVHAAGPFQQAP 123
+ + + + D V+ A P P
Sbjct: 55 VSSLDEVCEVCKGADAVISAFNPGWNNP 82
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 16/98 (16%), Positives = 35/98 (35%), Gaps = 9/98 (9%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
+++ G TG +G +G RN EK +++ +N+
Sbjct: 2 NIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDD---WRGKVSVRQLDYFNQE 57
Query: 101 SLLMALRDVD---LVVHAAGPFQQAPK--CTVLEAAIE 133
S++ A + +D + P + ++ AA +
Sbjct: 58 SMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQ 95
|
| >1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A* Length = 350 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNI 96
NAR + L G G A+A K +IV + A +++ L E++ + I
Sbjct: 126 RPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANL---KEYSGLTI 182
Query: 97 YNEGSLLMALRDVDLVVHAAGPFQQAP 123
S+ A++ VD++ A
Sbjct: 183 RRASSVAEAVKGVDIITTVTADKAYAT 209
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101
V+V GGTG GGS A L + ++ V +RN K AA + +E + + ++
Sbjct: 8 VVVFGGTGAQGGSVARTLLED-GTFKVRVVTRNPRKKAA-KELRLQGAEVVQGDQDDQVI 65
Query: 102 LLMALRDVDLV 112
+ +AL
Sbjct: 66 MELALNGAYAT 76
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 7e-04
Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 16/106 (15%)
Query: 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGS-RNREKGAAMVSTLGKNS---- 89
+ VLV G G V L L+ V G+ R+ K A +
Sbjct: 10 EGSLVLVTGANGFVASHVVEQL------LEHGYKVRGTARSASKLANLQKRWDAKYPGRF 63
Query: 90 EFAEV-NIYNEGSLLMALRDVDLVVHAAGPFQ-QAPKCTVLEAAIE 133
E A V ++ +G+ ++ V H A V+ AI
Sbjct: 64 ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIG 109
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 Length = 287 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-04
Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY 97
++ +++ G G + A L+K I++ +R EK A+ + +
Sbjct: 127 KDKNIVIYG-AGGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAEKLNKKFGEEV 182
Query: 98 NEGSLLMALRDVDLVVHA 115
L + L VD++++A
Sbjct: 183 KFSGLDVDLDGVDIIINA 200
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 20/112 (17%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGS-RNREKGAAMVSTL----- 85
M +++ V V G +G +G + L L+ V + R+ V L
Sbjct: 1 MGSQSETVCVTGASGFIGSWLVMRL------LERGYTVRATVRDPTNVKK-VKHLLDLPK 53
Query: 86 -GKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQA---PKCTVLEAAIE 133
+ + ++ +EGS A++ V H A P P+ V++ IE
Sbjct: 54 AETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIE 105
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 429 | |||
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 100.0 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 100.0 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 100.0 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 99.97 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 99.97 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 99.82 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.69 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.65 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.64 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.63 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.62 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.62 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.62 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.61 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.59 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.59 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.59 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.58 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.58 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.57 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.56 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.56 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.55 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.55 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.55 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.55 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.54 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.53 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.52 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.52 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.52 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.51 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.51 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.51 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.51 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.51 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.5 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.49 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.49 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.49 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.48 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.48 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.48 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.47 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.47 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.47 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.47 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.47 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.47 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.46 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.46 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.46 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.46 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.46 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.45 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.44 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.44 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.44 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.44 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.43 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.43 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.43 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.42 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.41 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.41 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.41 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.4 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.4 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.4 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.39 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.39 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.39 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.38 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.38 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.38 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.38 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.38 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.38 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.37 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.37 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.37 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.36 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.36 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.36 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.36 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.35 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.35 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.35 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.35 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.34 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.34 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.34 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.34 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.34 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.34 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.34 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.33 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.33 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.33 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.33 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.33 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.33 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.33 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.33 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.32 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.32 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.32 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.32 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.32 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.32 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.32 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.32 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.31 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.31 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.31 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.31 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.31 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.3 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.3 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.3 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.3 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.3 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.3 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.3 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.3 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.3 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.3 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.29 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.29 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.29 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.29 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.29 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.29 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.29 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.29 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.29 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.29 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.29 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.28 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.28 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.28 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.28 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.28 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.28 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.28 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.28 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.28 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.28 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.28 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.28 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.27 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.27 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.27 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.27 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.26 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.26 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.26 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.26 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.26 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.26 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.26 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.26 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.26 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.26 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.26 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.25 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.25 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.25 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.25 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.25 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.25 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.24 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.24 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.24 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.24 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.24 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.24 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.24 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.24 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.24 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.24 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.24 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.24 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.24 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.24 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.23 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.23 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.23 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.23 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.23 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.23 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.23 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.22 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.22 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.22 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.22 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.22 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.22 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.22 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.22 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.21 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.21 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.21 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.21 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.21 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.21 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.21 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.2 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.2 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.2 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.2 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.2 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.2 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.2 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.2 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.2 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.19 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.19 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.19 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.19 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.19 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.19 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.19 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.19 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.18 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.18 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.18 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.18 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.18 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.18 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.18 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.17 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.17 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.17 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.17 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.16 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.16 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.16 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.16 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.16 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.16 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.15 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.15 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.15 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.15 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.15 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.15 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.15 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.14 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.14 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.14 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.14 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.14 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.14 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.14 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.13 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.13 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.12 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.12 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.12 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.12 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.11 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.11 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.11 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.11 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.11 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.1 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.1 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.1 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.09 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.09 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.09 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.08 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.08 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.08 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.07 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.07 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.07 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.07 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.07 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.06 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.05 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.05 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.04 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.03 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.03 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.99 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.99 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.99 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.98 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.97 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.96 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.93 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.93 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.93 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.91 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.9 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 98.9 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.89 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.89 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.85 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 98.84 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.83 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.83 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.73 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.69 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.68 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.66 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.65 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.57 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.56 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.52 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.45 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.44 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.44 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.43 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.42 | |
| 3bio_A | 304 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 98.41 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.4 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.39 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.35 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.34 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.33 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.32 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.32 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.3 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.29 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.28 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.27 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.27 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.26 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.25 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.25 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.25 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.22 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 98.21 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 98.21 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 98.19 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 98.18 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.15 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 98.12 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 98.11 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 98.09 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 98.09 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.07 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 98.06 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 98.05 | |
| 3ec7_A | 357 | Putative dehydrogenase; alpha-beta, structural gen | 98.05 | |
| 3uuw_A | 308 | Putative oxidoreductase with NAD(P)-binding rossm | 98.04 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.03 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.03 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.02 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 98.02 | |
| 3ezy_A | 344 | Dehydrogenase; structural genomics, unknown functi | 98.01 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.01 | |
| 1tlt_A | 319 | Putative oxidoreductase (virulence factor MVIM HO; | 98.01 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 98.0 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.99 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.98 | |
| 3mz0_A | 344 | Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; | 97.98 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.98 | |
| 2ho3_A | 325 | Oxidoreductase, GFO/IDH/MOCA family; streptococcus | 97.97 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.96 | |
| 3evn_A | 329 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 97.96 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.94 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.93 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.92 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.91 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.91 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.9 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.9 | |
| 1f06_A | 320 | MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH | 97.9 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 97.9 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.9 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.89 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.88 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.88 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.86 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 97.86 | |
| 3oqb_A | 383 | Oxidoreductase; structural genomics, protein struc | 97.85 | |
| 1xea_A | 323 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 97.85 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.84 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 97.84 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.81 | |
| 3m2t_A | 359 | Probable dehydrogenase; PSI, SGXNY, structural gen | 97.8 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 97.8 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.78 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.77 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 97.75 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.75 | |
| 2ixa_A | 444 | Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver | 97.73 | |
| 3ohs_X | 334 | Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d | 97.72 | |
| 3e82_A | 364 | Putative oxidoreductase; NAD, GFO/IDH/MOCA family, | 97.71 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.71 | |
| 1h6d_A | 433 | Precursor form of glucose-fructose oxidoreductase; | 97.71 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.71 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.7 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.7 | |
| 3v5n_A | 417 | Oxidoreductase; structural genomics, PSI-biology, | 97.7 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.69 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.69 | |
| 1zh8_A | 340 | Oxidoreductase; TM0312, structural genomics, JO ce | 97.68 | |
| 1ydw_A | 362 | AX110P-like protein; structural genomics, protein | 97.68 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 97.67 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.67 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.67 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.67 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.65 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.65 | |
| 3kux_A | 352 | Putative oxidoreductase; oxidoreductase family, cs | 97.64 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 97.64 | |
| 3c1a_A | 315 | Putative oxidoreductase; ZP_00056571.1, oxidoreduc | 97.63 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.63 | |
| 1r0k_A | 388 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; N | 97.61 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.61 | |
| 4gqa_A | 412 | NAD binding oxidoreductase; structural genomics, P | 97.6 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.6 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.59 | |
| 3gdo_A | 358 | Uncharacterized oxidoreductase YVAA; structural ge | 97.59 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.59 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.59 | |
| 3moi_A | 387 | Probable dehydrogenase; structural genomics, PSI2, | 97.58 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 97.58 | |
| 3f4l_A | 345 | Putative oxidoreductase YHHX; structural genomics, | 97.58 | |
| 3dty_A | 398 | Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram | 97.56 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.55 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.54 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.54 | |
| 3a06_A | 376 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; M | 97.53 | |
| 3fhl_A | 362 | Putative oxidoreductase; NAD-binding domain, PSI-2 | 97.52 | |
| 3btv_A | 438 | Galactose/lactose metabolism regulatory protein GA | 97.51 | |
| 3upl_A | 446 | Oxidoreductase; rossmann fold, NADPH binding; 1.50 | 97.5 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 97.49 | |
| 3i23_A | 349 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 97.49 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 97.48 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.47 | |
| 2nvw_A | 479 | Galactose/lactose metabolism regulatory protein GA | 97.47 | |
| 1u8f_O | 335 | GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l | 97.46 | |
| 3o9z_A | 312 | Lipopolysaccaride biosynthesis protein WBPB; oxido | 97.46 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.46 | |
| 3u3x_A | 361 | Oxidoreductase; structural genomics, PSI-biology, | 97.45 | |
| 2p2s_A | 336 | Putative oxidoreductase; YP_050235.1, structural g | 97.45 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.45 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.45 | |
| 1j5p_A | 253 | Aspartate dehydrogenase; TM1643, structural genomi | 97.44 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.43 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.43 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.42 | |
| 4h3v_A | 390 | Oxidoreductase domain protein; structural genomics | 97.41 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 97.4 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.4 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.4 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 97.4 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.39 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.39 | |
| 4ew6_A | 330 | D-galactose-1-dehydrogenase protein; nysgrc, PSI-b | 97.39 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.38 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.38 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.38 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.37 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.37 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.37 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.34 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 97.34 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.34 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.33 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.32 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.31 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.31 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.3 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.29 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.29 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.28 | |
| 1b7g_O | 340 | Protein (glyceraldehyde 3-phosphate dehydrogenase; | 97.26 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.26 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.25 | |
| 3oa2_A | 318 | WBPB; oxidoreductase, sugar biosynthesis, dehydrog | 97.24 | |
| 4gmf_A | 372 | Yersiniabactin biosynthetic protein YBTU; rossmann | 97.23 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 97.23 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.21 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.2 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 97.19 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.19 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.19 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.18 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.18 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.17 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.17 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.16 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.15 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.15 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 97.12 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.11 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.11 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.1 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 97.09 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.09 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.07 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.07 |
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=350.00 Aligned_cols=351 Identities=22% Similarity=0.302 Sum_probs=283.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCC--ceEEEEecCchhHHHHHHHhCC----CcEEEEeeCCChHHHHHHhcC--cc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPD--LQIVVGSRNREKGAAMVSTLGK----NSEFAEVNIYNEGSLLMALRD--VD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g--~~v~v~~R~~~~~~~l~~~l~~----~v~~~~~Dl~d~~~l~~~~~~--~D 110 (429)
|++|+|+|| |++|+.+++.|++. ++ .+|++++|+.++++++++.+.. ++..+.+|++|.+++++++++ +|
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~-g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMN-REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTC-TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 479999998 89999999999986 33 3899999999999988877642 588999999999999999986 99
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhH------HHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIY------SQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~------~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
+||||++++.. .+++++|++.|++|+|+++.... +.....+.+.++++|+.+++++|++||++++++.+++
T Consensus 79 vVin~ag~~~~---~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~a~~~~ 155 (405)
T 4ina_A 79 IVLNIALPYQD---LTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCAYAQ 155 (405)
T ss_dssp EEEECSCGGGH---HHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHHHHHHH
T ss_pred EEEECCCcccC---hHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHHHHHHH
Confidence 99999998753 78999999999999998664321 2233478888999999999999999999999999988
Q ss_pred HHHHhhcCCCCeEEEEEeeecCCCCCC-cc--HHHHHHHHhCCceEEeeCCeEEEecCCCCCeeeecCCCceeeeEEeec
Q 014177 185 RVARNESKGEPERLRFSYYTAGTGGAG-PT--ILATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLN 261 (429)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~~~~G~~~~g-~~--~~~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~~~fp~~~g~~~~~~~~ 261 (429)
+ +.+++++.++++++..|+.+.. .. ...+.+..+.+++.+|++|+++.++|++..+.++||. +|++++|.++
T Consensus 156 ~----~~~~~i~~i~i~~~~gg~~g~~~~~~~sp~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~fp~-~G~~~~y~~~ 230 (405)
T 4ina_A 156 K----HYFDEIHEIDILDCNAGDHGYPFATNFNPEINLREVSSKGRYWENGEWIETEPMEIMQVWDYPE-VGPKDSYLLY 230 (405)
T ss_dssp H----HTCSEEEEEEEEEEECCBCSSSSCCSSCHHHHHHHTTSCEEEEETTEEEEESTTCCEEEEEETT-TEEEEEEEEC
T ss_pred H----hccCcccEEEEEEecCCCCCccceeeeCHHHHHHHhcCCcEEEECCEEEEecCCceeEEEECCC-CceeeEEEeC
Confidence 6 3578888899865544443221 11 1224667899999999999999999999999999986 9999999999
Q ss_pred CchhhhhhhhcC-CCeEEEEcccChhhhhHHHHHhHhhcchhhccchhh---------hhhhhhcchhhhhhhcccCCcc
Q 014177 262 LPEVRSAREVLG-VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSK---------VQQLVQLFDPVVRAFDGIAGER 331 (429)
Q Consensus 262 ~~e~~tl~~~~~-~~~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~---------~~~l~~~~~~~~~~~~~~~~~~ 331 (429)
+||+.||+++++ ++++++|+++. +.+...|+.|..+||++++++ ++.|..++...... .+...|.
T Consensus 231 ~~e~~tl~~~~~~~~~v~~~~~~~----~~~~~~~~~L~~lGl~~~~~v~~~g~~v~p~~~l~~~l~~~~~~-~~~~~d~ 305 (405)
T 4ina_A 231 HEELESLVRNIKGLKRIRFFMTFG----QSYLTHMRCLENVGMLRIDEIEVNGCKVVPIQVLKALLPDPASL-ASRTKGK 305 (405)
T ss_dssp CTHHHHHHHHSTTCCEEEEEEECC----HHHHHHHHHHHHHTTTCCSCEEETTEEECHHHHHHHHSCCHHHH-TTTCBSE
T ss_pred CCcHHHHHhhCCCcceEEeecccC----HHHHHHHHHHHHcCCCCCCceeeCCceecHHHHHHHhcchhhcc-CCCCCCe
Confidence 999999999997 79999998876 455666778889999987642 34443333322222 2245688
Q ss_pred eEEEEEEEe-CCCCceE-Eeee------------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHH
Q 014177 332 VSMRVDLEC-TDGRNTV-GIFS------------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVL 396 (429)
Q Consensus 332 ~~~~v~v~g-~dG~~~~-~~~~------------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~ 396 (429)
++|++.++| |||++.+ ++|. .++|+++||++++++|+++++|+ .++||+.||+++ | ++|
T Consensus 306 ~~i~~~v~g~~~G~~~~~~~~~~~~~~~~~~~~~~~a~~~ttg~p~~i~a~li~~G~~~~~Gv~~~e~~~--~----~~f 379 (405)
T 4ina_A 306 TNIGCYIKGIKEGKARTIYIYNVCDHESCYREVNAQAISYTTGVPAMIGAKLMLEGKWSGKGVFNMEELD--P----DPF 379 (405)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEHHHHHHHHSSCHHHHHHHHHHHHHHHHHHTTSSCCSEEEEGGGSC--S----HHH
T ss_pred EEEEEEEEEEECCeEEEEEEEEEeccccccccccceEEEeccChhHHHHHHHHhCCccCCCceecccccC--c----HHH
Confidence 999999999 8999653 3332 25689999999999999999999 899999999997 7 899
Q ss_pred HHHhhcCcchhhhcc--CCceeecC
Q 014177 397 LKRASQGTINFVMNK--APWMVETE 419 (429)
Q Consensus 397 l~~~~~~~~~~~~~~--~~~~~~~~ 419 (429)
|+ .|++ +||.+.|.
T Consensus 380 l~---------~l~~~Gi~~~~~~~ 395 (405)
T 4ina_A 380 MD---------ELNKQGLPWEVKEM 395 (405)
T ss_dssp HH---------HHHHTTCCEEEEEC
T ss_pred HH---------HHHhcCCCeEEEEh
Confidence 99 6654 89988775
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=310.67 Aligned_cols=337 Identities=18% Similarity=0.237 Sum_probs=263.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
-++|||+|+|| |++|+.+++.|.+ .++|.++|++.++++++. ..+..+++|+.|.+++.++++++|+||||+
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~----~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLKD---EFDVYIGDVNNENLEKVK----EFATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTT---TSEEEEEESCHHHHHHHT----TTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCccEEEEECC-CHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHh----ccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 45678999997 9999999999976 368999999998887664 356788999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCe
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE 196 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~ 196 (429)
+|+.. .+++++|+++|+||+|++.+.. ....+++.++++|+.++++||++||++++++.++.+.+ ...
T Consensus 86 p~~~~---~~v~~~~~~~g~~yvD~s~~~~---~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~~------~~~ 153 (365)
T 3abi_A 86 PGFLG---FKSIKAAIKSKVDMVDVSFMPE---NPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQEL------DLK 153 (365)
T ss_dssp CGGGH---HHHHHHHHHHTCEEEECCCCSS---CGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHHS------CEE
T ss_pred CCccc---chHHHHHHhcCcceEeeeccch---hhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHHhc------ccc
Confidence 98753 7999999999999999997654 23478899999999999999999999999999988742 245
Q ss_pred EEEEEeeecCCCC-CC--ccHH----HHHHHHhCCceEEeeCCeEEEecCCCCCeeeecCCCceeeeEEeecCchhhhhh
Q 014177 197 RLRFSYYTAGTGG-AG--PTIL----ATSFLLLGEEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAR 269 (429)
Q Consensus 197 ~i~~~~~~~G~~~-~g--~~~~----~~~~~~~~~~~~v~~~G~~~~v~~~~~~~~~~fp~~~g~~~~~~~~~~e~~tl~ 269 (429)
.+.+ ++.+.+.. .+ .+.+ ...+..+.+|..+|+||+++.++|+++.+.++||. +..++ +.+.++.++.
T Consensus 154 ~~~~-~~gg~p~~~~~~~~y~~~~s~~~~i~~~~~~~~~~~~G~~~~v~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~ 228 (365)
T 3abi_A 154 EGYI-YVGGLPKDPKPPLYYKITWSPRDLIEEYTRPARVIRNGKVSKVDPLSEVKKVKIGK--FEFEA--FISDGLRSML 228 (365)
T ss_dssp EEEE-EEEEEESSCCTTTCCCCCSCHHHHHHHHHSCEEEEETTEEEEECTTTCEEEEEETT--EEEEE--EECSCCTTHH
T ss_pred ceeE-EecccCCCCCCcchhceeechhhhHHhhCCCcEEEECCeEEEecCcCcceEEecCC--cceee--ecccchhhhh
Confidence 5555 33322221 11 1222 23567889999999999999999999999999973 24444 4679999999
Q ss_pred hhcCCCeEEEEcccChhhhhHHHHHhHhhcchhhccchhhhhhhhhcchhhhhhhcccCCcceEEEEEEEeCCCCceEEe
Q 014177 270 EVLGVPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGI 349 (429)
Q Consensus 270 ~~~~~~~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~g~dG~~~~~~ 349 (429)
+.++.+++.++ +.||+++...++.|..+|+++.++. +.+.....+.. ....++.+.|+|.+++.+++....+
T Consensus 229 ~~~~~~~~~~~----t~r~~g~~~~~~~L~~lGl~~~~~~-~~~~~~l~~~~---~~~~~d~~~~~V~g~~~~~~~~~~~ 300 (365)
T 3abi_A 229 ETINSERLEEW----TLRWPGHLEKIKVLRELGFFKPENL-DFTLRVIEPLM---RYETKDFSIMKVVGKGEEGEMEFFL 300 (365)
T ss_dssp HHSCCSEEEEE----EEECTTHHHHHHHHHHTTTTSHHHH-HHHHHHHGGGG---CSSCCEEEEEEEEEEETTEEEEEEE
T ss_pred hccCcCceeee----ecccccHHHHHHHHHHhcCCCcchH-HHHHhhhHHhc---CCccCceEEEEEEEEeCCCeEEEEE
Confidence 99999999876 5688999999999999999876653 33333333332 2234667778888777666655555
Q ss_pred eec-----CCcchhhhHHHHHHHHHHHcCCCCCcccCCCCCCCcchhHHHHHHHHhhcCcchh
Q 014177 350 FSH-----RRLSVSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINF 407 (429)
Q Consensus 350 ~~~-----~~~~~~T~~~~a~~a~~ll~G~~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~~~ 407 (429)
+.+ ++|+++||++++++++++++|..++||++||++. .+.+..++||+++++..+.+
T Consensus 301 ~~~~d~~~sAMa~tTG~~~a~~a~lil~g~i~~GV~~PE~l~-~~~~~~~~~l~~L~~~GI~I 362 (365)
T 3abi_A 301 YDEEDSMFSSMSRVTGFTAAIISRIVAENTCTFGVIPPEILG-MREDTFRRIIDELKERGISI 362 (365)
T ss_dssp EEECCSSSCHHHHHHHHHHHHHHHHHHTTCSCSEEECTHHHH-HSHHHHHHHHHHHHHTTCCE
T ss_pred EEccCCCccHHHHHHHHHHHHHHHHHHcCCCCCCEEChhhcc-cchhhHHHHHHHHHHCCCee
Confidence 543 4589999999999999999999668999999973 25567799999888876653
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=262.27 Aligned_cols=352 Identities=18% Similarity=0.224 Sum_probs=250.8
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.++++++|+|+|+ |++|+.+++.|++. .+++|++++|+.++++++++. .++..+.+|+.|.+++.++++++|+|||
T Consensus 19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~-~g~~V~v~~R~~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~~~DvVIn 94 (467)
T 2axq_A 19 GRHMGKNVLLLGS-GFVAQPVIDTLAAN-DDINVTVACRTLANAQALAKP--SGSKAISLDVTDDSALDKVLADNDVVIS 94 (467)
T ss_dssp ----CEEEEEECC-STTHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHGG--GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred cCCCCCEEEEECC-hHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHh--cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence 4467889999997 99999999999985 467999999999998888765 2467788999999899999999999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
|+++... ..+.++|++.|++++|++.... ....+.+.++++|+.++.++|++||++++++..++.+.. +.+++
T Consensus 95 ~tp~~~~---~~v~~a~l~~g~~vvd~~~~~p---~~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~~-~~g~~ 167 (467)
T 2axq_A 95 LIPYTFH---PNVVKSAIRTKTDVVTSSYISP---ALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEVH-RAGGK 167 (467)
T ss_dssp CSCGGGH---HHHHHHHHHHTCEEEECSCCCH---HHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHHH-HTTCE
T ss_pred CCchhhh---HHHHHHHHhcCCEEEEeecCCH---HHHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHHH-hccCc
Confidence 9986532 4688999999999999875322 234667788889999999999999999999988777653 23355
Q ss_pred CeEEEEEeeecCCC------CCCccHHH----HHHHHhCCceEEeeCCeEEEecCCCCCeeee----cCCCceeeeEEee
Q 014177 195 PERLRFSYYTAGTG------GAGPTILA----TSFLLLGEEVVAYNKGEEITLEPYSGMLSVD----FGKGIGRKDVFLL 260 (429)
Q Consensus 195 v~~i~~~~~~~G~~------~~g~~~~~----~~~~~~~~~~~v~~~G~~~~v~~~~~~~~~~----fp~~~g~~~~~~~ 260 (429)
+..+.. |+..-+. ..+ +.|. ..+..+..|..+|+||+++.+++++..+.++ ||. + ..++|..
T Consensus 168 ~~s~~~-wtG~~p~~~~~~~~l~-y~fsws~~g~i~~~~~~a~~~~~G~~~~v~~~~~~~~~~~~~~~~g-~-~~e~~~~ 243 (467)
T 2axq_A 168 LKSFLS-YCGGLPAPEDSDNPLG-YKFSWSSRGVLLALRNSAKYWKDGKIETVSSEDLMATAKPYFIYPG-Y-AFVCYPN 243 (467)
T ss_dssp EEEEEE-EEEEEECGGGCCSTTS-CCBSSCCHHHHHGGGSCEEEEETTEEEEECTTTHHHHCEECCSSTT-C-CEEEEEC
T ss_pred ceEEEE-EecccCCccccccccc-CcCCCCHHHHHHHhcCCeEEEECCEEEEecChhhhccccccccCCC-c-cEEEecC
Confidence 667776 4422111 111 1122 2455677799999999999999998777776 553 4 6777754
Q ss_pred cCchhhhhhhhcC---CCeEEEEcccChhhhhHHHHHhHhhcchhhccchhhh---------hhhhh-cch---------
Q 014177 261 NLPEVRSAREVLG---VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKV---------QQLVQ-LFD--------- 318 (429)
Q Consensus 261 ~~~e~~tl~~~~~---~~~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~~---------~~l~~-~~~--------- 318 (429)
.+...+.+.++ ++++. ++ +.||+++...++.|..+||+++++.. +.+.. +.+
T Consensus 244 --~~~~~~~e~y~i~~~~~~~--r~--tlR~~g~~~~~~~L~~lGl~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~l~ 317 (467)
T 2axq_A 244 --RDSTLFKDLYHIPEAETVI--RG--TLRYQGFPEFVKALVDMGMLKDDANEIFSKPIAWNEALKQYLGAKSTSKEDLI 317 (467)
T ss_dssp --SBCTHHHHHTTCTTCSEEE--EE--EEEETTHHHHHHHHHHTTTTCCSBCGGGSSCCBHHHHHHHHHTCSSSSHHHHH
T ss_pred --CCcchhhhhhCCCCcceeE--EE--EEEeCCHHHHHHHHHHcCCCCCCcccccCCCcCHHHHHHHhcCCCcccHHHHH
Confidence 44434556654 44443 22 56789999999999999999877431 11111 110
Q ss_pred -----------------------------------------hhhhh------hcccCCcceEEEEEEE-e-CCCCceEEe
Q 014177 319 -----------------------------------------PVVRA------FDGIAGERVSMRVDLE-C-TDGRNTVGI 349 (429)
Q Consensus 319 -----------------------------------------~~~~~------~~~~~~~~~~~~v~v~-g-~dG~~~~~~ 349 (429)
.+... +.+.+.|.+.|+++++ | +||++.++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~d~l~~~l~~~l~~~~~e~D~v~l~~~~~~~~~~g~~~~~~ 397 (467)
T 2axq_A 318 ASIDSKATWKDDEDRERILSGFAWLGLFSDAKITPRGNALDTLCARLEELMQYEDNERDMVVLQHKFGIEWADGTTETRT 397 (467)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHTTTTSSCBCCCCSBHHHHHHHHHHHHSBCCTTCCEEEEEEEEEEEECTTSCEEEEE
T ss_pred HHHHhhhcCCchhHHHHHHHHHHhcCCCCCCccCCCCCHHHHHHHHHHHhhccCCCCCceEEEEEEEEEEecCCcEEEEE
Confidence 00000 1123567899999999 7 899875443
Q ss_pred ee---------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcchhhhccCCceeec
Q 014177 350 FS---------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVET 418 (429)
Q Consensus 350 ~~---------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 418 (429)
++ .++|+++||+++|++|+++++|+ ..+||+.|... +.-+|||+++++. -++||.+++
T Consensus 398 ~~~~~y~~~~g~sama~tvG~p~ai~a~~i~~g~i~~~Gv~~P~~~-----e~~~p~l~~L~~~------~Gi~~~~~~ 465 (467)
T 2axq_A 398 STLVDYGKVGGYSSMAATVGYPVAIATKFVLDGTIKGPGLLAPYSP-----EINDPIMKELKDK------YGIYLKEKT 465 (467)
T ss_dssp EEEEEECCTTSCCHHHHHHHHHHHHHHHHHHTTSSCCSEEECSCSH-----HHHHHHHHHHHHH------HCCCCEEEE
T ss_pred EEEEEecCCCCceEEehhhchhHHHHHHHHhCCccCCCcccCCCcH-----HHHHHHHHHHHHh------cCCceEEEe
Confidence 33 35699999999999999999999 78999999322 2237899943321 037777653
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-30 Score=259.27 Aligned_cols=352 Identities=16% Similarity=0.182 Sum_probs=250.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|++++|+|+| +|++|+++++.|++. +++|++++|+.++++++.+.++ .+..+++|+.|.+++.++++++|+||||+
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~-~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a 76 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVAKHDLVISLI 76 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCT-TEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence 4568999998 799999999999986 7899999999988877765543 46788899999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCe
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE 196 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~ 196 (429)
++... ..+.++|++.|++++|.+... .....+.+.++++|+.++.++|+.||.+++++.+++.+.. +.++++.
T Consensus 77 ~~~~~---~~i~~a~l~~g~~vvd~~~~~---~~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~~-~~gg~i~ 149 (450)
T 1ff9_A 77 PYTFH---ATVIKSAIRQKKHVVTTSYVS---PAMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVH-AAGGKIK 149 (450)
T ss_dssp C--CH---HHHHHHHHHHTCEEEESSCCC---HHHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHHH-HTTCEEE
T ss_pred ccccc---hHHHHHHHhCCCeEEEeeccc---HHHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHhc-ccCCeee
Confidence 86532 457889999999999986432 2345677888999999999999999999999999987642 1235677
Q ss_pred EEEEEeeecCCCC------CCc---cHHHHHHHHhCCceEEeeCCeEEEecCCC---CCeeeecCCCceeeeEEeecCch
Q 014177 197 RLRFSYYTAGTGG------AGP---TILATSFLLLGEEVVAYNKGEEITLEPYS---GMLSVDFGKGIGRKDVFLLNLPE 264 (429)
Q Consensus 197 ~i~~~~~~~G~~~------~g~---~~~~~~~~~~~~~~~v~~~G~~~~v~~~~---~~~~~~fp~~~g~~~~~~~~~~e 264 (429)
.+++ |+..-+.. .+. ..-...+..+..+..++.||+++.+++++ ..+.++|++++ ..++|+. .|
T Consensus 150 ~~~~-~~G~~p~~~~~~~~l~~~~~~s~~g~l~~~~~~~~~~~~G~~~~v~~~~~~~~~~~~~~~~g~-~~e~~~~--~~ 225 (450)
T 1ff9_A 150 TFLS-YCGGLPAPESSDNPLGYKFSWSSRGVLLALRNAASFYKDGKVTNVAGPELMATAKPYFIYPGF-AFVAYPN--RD 225 (450)
T ss_dssp EEEE-EEEEEECGGGCCSTTSCCCSSCHHHHHHHTTSCEEEEETTEEEEECTHHHHHTCEECCSSTTC-CEEEEEC--SB
T ss_pred EEEE-EEcccCccccCCccccceeccChHHHHHHhhChhheEeCCeEEEEeCcchhccceeeecCCCc-eEEEecc--CC
Confidence 7776 43211110 010 00123455678899999999999999987 55667885565 5677754 55
Q ss_pred hhhhhhhcC---CCeEEEEcccChhhhhHHHHHhHhhcchhhccchhhh---------hhhhh-cch-------------
Q 014177 265 VRSAREVLG---VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRSKV---------QQLVQ-LFD------------- 318 (429)
Q Consensus 265 ~~tl~~~~~---~~~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~~~---------~~l~~-~~~------------- 318 (429)
...+.+.++ ++++.. .+.||+++...++.|..+||+++++.. +.+.. +.+
T Consensus 226 s~~~~~~~~~~~~~~l~r----~tlR~~g~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 301 (450)
T 1ff9_A 226 STPYKERYQIPEADNIVR----GTLRYQGFPQFIKVLVDIGFLSDEEQPFLKEAIPWKEATQKIVKASSASEQDIVSTIV 301 (450)
T ss_dssp CTTHHHHTTCTTCSEEEE----EEEEETTHHHHHHHHHHTTTTCCCBCGGGSSCCBHHHHHHHHHTCSSSSHHHHHHHHH
T ss_pred cchhHhhcCCCCcceEEE----eeEeccCHHHHHHHHHHcCCCCCCccccccCCCCHHHHHHHHhCCCCCcHHHHHHHHH
Confidence 444556644 445542 266889999999999999999876431 11111 000
Q ss_pred -------------------------------------hhhhh------hcccCCcceEEEEEEE-e-CCCCceEEeee--
Q 014177 319 -------------------------------------PVVRA------FDGIAGERVSMRVDLE-C-TDGRNTVGIFS-- 351 (429)
Q Consensus 319 -------------------------------------~~~~~------~~~~~~~~~~~~v~v~-g-~dG~~~~~~~~-- 351 (429)
.+... +.+.+.|.+.|+++++ | +||++.+++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~l~~~l~~~~~~~~~e~d~v~l~~~~~~~~~~g~~~~~~~~~~ 381 (450)
T 1ff9_A 302 SNATFESTEEQKRIVAGLKWLGIFSDKKITPRGNALDTLCATLEEKMQFEEGERDLVMLQHKFEIENKDGSRETRTSSLC 381 (450)
T ss_dssp HHSCCSCHHHHHHHHHHHHHHTTTSSCBCCCCSBHHHHHHHHHHHHSSCCTTCCEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred HhccCCchHHHHHHHHHHHhhccCCcccccCCCCHHHHHHHHhhHhhccCCCCCceEEEEEEEEEEecCCCEEEEEEEEE
Confidence 00000 1123577899999999 7 89997655444
Q ss_pred ----------cCCcchhhhHHHHHHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHHHhhcCcchhhhccCCceeec
Q 014177 352 ----------HRRLSVSVGTAIAAFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVET 418 (429)
Q Consensus 352 ----------~~~~~~~T~~~~a~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 418 (429)
.++|+++||++++++|+++++|+ ..+||+.|.+ .+.-+|||+++.+. -++||.+++
T Consensus 382 ~~~~~~~~~g~~ama~t~G~p~ai~a~~i~~g~~~~~Gv~~p~~-----~e~~~p~l~~L~~~------~Gi~~~~~~ 448 (450)
T 1ff9_A 382 EYGAPIGSGGYSAMAKLVGVPCAVAVKFVLDGTISDRGVLAPMN-----SKINDPLMKELKEK------YGIECKEKV 448 (450)
T ss_dssp EECCCTTSSSCCHHHHHHHHHHHHHHHHHHHTSSCCCEEECSCS-----HHHHHHHHHHHHHH------HCCCCEEEE
T ss_pred EeccccCCCCccceeHhhchHHHHHHHHHhCCCcCCCceeCCCc-----HHHHHHHHHHHHHh------cCCceEEEe
Confidence 24589999999999999999999 7899999921 11227799933321 047787653
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-19 Score=177.64 Aligned_cols=330 Identities=13% Similarity=0.106 Sum_probs=201.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc---eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH-HHHHhcCccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL---QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS-LLMALRDVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~---~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~-l~~~~~~~DvVi~ 114 (429)
+++|+|+| +|.||+.+++.|+++ +++ +|+++|.+.... .+.+.++-++..+++|..|.++ +.+++++.|+|||
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~-~dv~~~~I~vaD~~~~~~-~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN 89 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEK-FDIKPSQVTIIAAEGTKV-DVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLID 89 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHH-BCCCGGGEEEEESSCCSC-CHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhC-CCCceeEEEEeccchhhh-hHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEE
Confidence 46899999 577999999999986 355 799998876542 3334443223334444455433 5667877799999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChh---H------------HHHHHhhHHHHH-HcCCcEEecCCCccchhHH
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTI---Y------------SQRAKSFKDRAI-AANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~---~------------~~~~~~~~~~a~-~~g~~~i~~~g~~pG~s~~ 178 (429)
++-++.. ..++++|+++|++|+|++.+.. + |.....+.+.++ ++| ..+++||++||+++.
T Consensus 90 ~s~~~~~---l~Im~acleaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G-tAilg~G~nPGvvsv 165 (480)
T 2ph5_A 90 VSIGISS---LALIILCNQKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK-TALITHGANPGLVSH 165 (480)
T ss_dssp CCSSSCH---HHHHHHHHHHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCS-CEECSCBTTTBHHHH
T ss_pred CCccccC---HHHHHHHHHcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC-cEEecCCCCccHHHH
Confidence 8766654 8999999999999999985321 1 111123333333 357 999999999999999
Q ss_pred HHHHHHHHHHhhcCC------------------CCeEEEEE--eeecCCCCC--CccH----HHHHHHHhCCceEE----
Q 014177 179 MAAELVRVARNESKG------------------EPERLRFS--YYTAGTGGA--GPTI----LATSFLLLGEEVVA---- 228 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~------------------~v~~i~~~--~~~~G~~~~--g~~~----~~~~~~~~~~~~~v---- 228 (429)
++.+++..+.++.+. .+..|.++ ....+..+. .... ...+++++..|..+
T Consensus 166 f~~~Al~~la~d~g~~~~~~~~~~~~~~l~~~lgVk~IhiaerDtqv~~~Pk~~~~F~~twS~eg~I~E~~~P~e~~wg~ 245 (480)
T 2ph5_A 166 FIKEALLNIAKDNGLTINRPKNAAEWANLAMTLGIKVIHVAEQDSQVTYPPKSPGEFVNTWSANGLILEGLQPAEIGWGT 245 (480)
T ss_dssp HHHHHHHHHHHTTTCCCCCCCSHHHHHHHHHHTTCCEEEEEEEECCEESSCCCTTEEEESSCHHHHHHHHHSEEEEECCT
T ss_pred HHHHHHHhHhhhcCCcccccccchhhhHHHhhcCceEEEEeeecccccccCCCCCeeecccchhhhHHHhcCchhhcccc
Confidence 998888887654322 34556652 111121111 1111 22356778888655
Q ss_pred -----------eeCC----eEEEecCCCCCeeeec-CCCceeeeEEeecCchhhhhhhhcCCC---eEEEEcccC--hhh
Q 014177 229 -----------YNKG----EEITLEPYSGMLSVDF-GKGIGRKDVFLLNLPEVRSAREVLGVP---TVSARFGTA--PFF 287 (429)
Q Consensus 229 -----------~~~G----~~~~v~~~~~~~~~~f-p~~~g~~~~~~~~~~e~~tl~~~~~~~---~v~~~~g~~--~~~ 287 (429)
+++| .+...++++ ++...+ |. +|+...|.+.|+|+.++.+++.+. .+.+|..+. ...
T Consensus 246 he~~~p~~~~~~~~G~~~~~~~t~~g~~-t~~~t~~p~-~g~~~g~lv~HeE~~si~~~~t~~~~g~~~yr~T~hY~yh~ 323 (480)
T 2ph5_A 246 HEAHWPHDAYSHSNGPQCAIYLSRPSAG-VMVRSWTPT-LGAFHGFLITHAETISLTNFLTLKNGSELLYRPTVHYAYNP 323 (480)
T ss_dssp TCCCCCTTEECCSSSCTTEEEEEEEGGG-CEEEECCTT-TCSEEEECCCCSHHHHHHHHTCEESSSSEEECCEEEEEEEC
T ss_pred cccccCCcccccccCcceeEEEcCCCce-eEEEEeCCC-ccceeEEEeecHHHhhhhhceeeccCCeeeeecchhhhccc
Confidence 3456 477777774 444444 54 899999999999999999999742 465554442 011
Q ss_pred hhHHHHHhHhhcchhhccchhhhhhhh-hcchhhhhhhcccCCcceEEEEEEEe-CCCCce----------EEeeecCCc
Q 014177 288 WNWGMVTMQRLFPAEYLRDRSKVQQLV-QLFDPVVRAFDGIAGERVSMRVDLEC-TDGRNT----------VGIFSHRRL 355 (429)
Q Consensus 288 ~~~~~~~~~~l~~~~ll~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~v~v~g-~dG~~~----------~~~~~~~~~ 355 (429)
-+..+..+ -++.. ++. ..+.+. .+.++ +......+.|.+.| ++|.-- ++++-..
T Consensus 324 ~~~~~~sl---~el~g-~~~-~~q~l~~il~~~-------i~~G~d~lGvll~G~~~g~~w~gs~l~~e~~r~l~p~~-- 389 (480)
T 2ph5_A 324 CPDARLSI---FELKS-NEW-KPQNKNRLILNE-------IIDGCDELGVLLMGNQRGAYWYGSTLSIQEARQIAPYN-- 389 (480)
T ss_dssp CHHHHHHH---HHHHH-TTT-CCCSEEEECSTT-------EEECEEEEEEEEECCTTCEEEEEEEEEHHHHHHHCSSC--
T ss_pred HHHHhhcc---hhhhC-CCc-ChHHHhcccCCC-------CCCcceeEEEEEEEEcCCcccccccccHHHHHhhcccC--
Confidence 12222222 22211 111 112121 12222 12334457777778 666321 1122122
Q ss_pred chhhhHHHH--HHHHHHHcCC-CCCcccCCCCCCCcchhHHHHHHH
Q 014177 356 SVSVGTAIA--AFVLAVLEGA-TQPGVWFPEEPEGIAIEAREVLLK 398 (429)
Q Consensus 356 ~~~T~~~~a--~~a~~ll~G~-~~~Gv~~pe~~~~~~~~~~~~~l~ 398 (429)
.+|++++| +.|-++..++ +..|++.||+++ = +.||+
T Consensus 390 -nAt~lqvaa~v~ag~~w~~~~p~~G~v~~e~~~--~----~~~l~ 428 (480)
T 2ph5_A 390 -NATSLQVVASMISGIIWAIEHPDEGIVEPEEVD--H----QYIID 428 (480)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSCCCCEECGGGSC--H----HHHHH
T ss_pred -CceeehHHHHHHHHHHHccccccCCCcccccCC--H----HHHHH
Confidence 45555544 4456777888 899999999998 2 77888
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.5e-17 Score=158.86 Aligned_cols=189 Identities=15% Similarity=0.121 Sum_probs=134.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH----HHHHHhC----CCcEEEEeeCCChHHHHHHhc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA----AMVSTLG----KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~----~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
.+++|+||||||+||||+++++.|+++ |++|++.+|+..... .+..... .+++++++|++|.+++.++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 99 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK 99 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence 357899999999999999999999997 799999999654322 2222111 468999999999999999999
Q ss_pred CccEEEecCCCCCC---------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCC
Q 014177 108 DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGG 170 (429)
Q Consensus 108 ~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g 170 (429)
++|+|||||+.... .++.+++++|.+.++ ++|.+|+...|.... ..++|. .+ ....
T Consensus 100 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~--~~p~ 172 (351)
T 3ruf_A 100 GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEE-----NI--GNPL 172 (351)
T ss_dssp TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CC--CCCC
T ss_pred CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccC-----CC--CCCC
Confidence 99999999986421 235678999999998 456666555442211 011111 11 1123
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc----cHHHHHHH--HhCCceEEeeCCeE
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----TILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
..|+.+|+.++.+++.+.++++.++..+|. .+.+|++.... ..+...+. ..+.++.++.+|+.
T Consensus 173 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 241 (351)
T 3ruf_A 173 SPYAVTKYVNEIYAQVYARTYGFKTIGLRY-FNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET 241 (351)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCCEEEEE-CSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCEEEEee-CceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCe
Confidence 459999999999999988778889999998 56788876432 23333332 34566667766653
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.65 E-value=8e-16 Score=148.68 Aligned_cols=179 Identities=18% Similarity=0.210 Sum_probs=127.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|+|+|+||||+||+|+++++.|+++ |++|++.+|+..+.+ + .+++++++|++ .+++.++++++|+|||||+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~-----~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-I-----NDYEYRVSDYT-LEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC-----------CCEEEECCCC-HHHHHHHTTTCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-C-----CceEEEEcccc-HHHHHHhhcCCCEEEEccc
Confidence 3589999999999999999999997 789999999955433 2 26899999999 9999999999999999998
Q ss_pred CCCC-----------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 118 PFQQ-----------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 118 p~~~-----------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
+... .++.+++++|.+.+++ +|.+|+...|.... ..++|. .+ ......|+.+|..++.++
T Consensus 72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~-----~~--~~p~~~Y~~sK~~~E~~~ 144 (311)
T 3m2p_A 72 TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEK-----EL--PLPDLMYGVSKLACEHIG 144 (311)
T ss_dssp CCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTT-----SC--CCCSSHHHHHHHHHHHHH
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CC--CCCCchhHHHHHHHHHHH
Confidence 6532 1457899999999987 56666644442211 122221 11 112355999999999999
Q ss_pred HHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHHH--hCCceEEeeCCe
Q 014177 185 RVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLL--LGEEVVAYNKGE 233 (429)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~~--~~~~~~v~~~G~ 233 (429)
+.+.++.+.++..+|. ...+|++......+...+.. .+.+..++.+|+
T Consensus 145 ~~~~~~~g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 194 (311)
T 3m2p_A 145 NIYSRKKGLCIKNLRF-AHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSV 194 (311)
T ss_dssp HHHHHHSCCEEEEEEE-CEEECSCC--CCHHHHHHHHHHTCCCEEESSBCC
T ss_pred HHHHHHcCCCEEEEee-CceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCC
Confidence 9988777888889998 46788876543444433332 355666655554
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=150.97 Aligned_cols=190 Identities=13% Similarity=0.153 Sum_probs=132.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCC-ChHHHHHHhcCccEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY-NEGSLLMALRDVDLVV 113 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~-d~~~l~~~~~~~DvVi 113 (429)
..|++|+||||||+||||+++++.|+++ ++++|++.+|+.++...+.. ..+++++++|++ |.+.+.++++++|+||
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi 96 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDLVK--HERMHFFEGDITINKEWVEYHVKKCDVIL 96 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGGGG--STTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhhcc--CCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence 3477899999999999999999999986 46899999999876654432 146899999999 9999999999999999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEe----cCCCcc
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAIT----TGGIYP 173 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~----~~g~~p 173 (429)
|||+.... .++.+++++|.+.+.++|.+|+...|.... ..+.+. ..+... .....|
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~----~~~~~~~p~~~p~~~Y 172 (372)
T 3slg_A 97 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPD----ASALTYGPINKPRWIY 172 (372)
T ss_dssp ECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTT----TCCEEECCTTCTTHHH
T ss_pred EcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCcc----ccccccCCCCCCCCcH
Confidence 99986431 345789999999996677777755442211 011111 111111 112359
Q ss_pred chhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC--------ccHHHHHHH--HhCCceEEeeCCe
Q 014177 174 GVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG--------PTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g--------~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
+.+|+.++.+++.+.++ +.++..+|. .+.+|++..+ ...+...+. ..+.++.++.+|.
T Consensus 173 ~~sK~~~E~~~~~~~~~-g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 240 (372)
T 3slg_A 173 ACSKQLMDRVIWGYGME-GLNFTLFRP-FNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGS 240 (372)
T ss_dssp HHHHHHHHHHHHHHHTT-TCEEEEEEE-CSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHC-CCCEEEEcc-ccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCc
Confidence 99999999999988766 777888898 5678887542 223333332 2455666666554
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.63 E-value=7e-16 Score=151.15 Aligned_cols=190 Identities=17% Similarity=0.153 Sum_probs=130.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcC--ccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRD--VDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~--~Dv 111 (429)
+++|+||||||+||||+++++.|++++..++|++.+|+.. ..+.+..... .+++++++|++|.+++.+++++ +|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 4568999999999999999999999844478888887642 2222211111 4689999999999999999986 999
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH--HHhhHHHHHHcCCcEEecCCCcc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR--AKSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~--~~~~~~~a~~~g~~~i~~~g~~p 173 (429)
|||||+.... .++.+++++|.+.+++ +|.+|+...|... ...++|. .+. .....|
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~-----~~~--~p~~~Y 174 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE-----TPL--APNSPY 174 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT-----SCC--CCCSHH
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC-----CCC--CCCChh
Confidence 9999986432 1357899999999987 5666654443211 0112111 111 122459
Q ss_pred chhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeE
Q 014177 174 GVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
+.+|..++.+++.+.++++.++..+|. ...+|++......+...+. ..+.++.++.+|..
T Consensus 175 ~~sK~~~E~~~~~~~~~~g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (346)
T 4egb_A 175 SSSKASADMIALAYYKTYQLPVIVTRC-SNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLN 236 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEE-CEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEee-cceeCcCCCccchHHHHHHHHHcCCCceeeCCCCe
Confidence 999999999999988778888999998 5678987654444443333 33556666666653
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-16 Score=154.55 Aligned_cols=160 Identities=19% Similarity=0.193 Sum_probs=113.2
Q ss_pred cccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh
Q 014177 27 VLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 27 ~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
+++....+++.++|+||||||+||||+++++.|+++ |++|++.+|+..+ .+++++++|++|.+++.+++
T Consensus 7 ~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~---------~~~~~~~~Dl~d~~~~~~~~ 75 (347)
T 4id9_A 7 HHHHSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG---------TGGEEVVGSLEDGQALSDAI 75 (347)
T ss_dssp --------------CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS---------SCCSEEESCTTCHHHHHHHH
T ss_pred CCCCCCcccccCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC---------CCccEEecCcCCHHHHHHHH
Confidence 445555666778899999999999999999999997 7999999998765 36789999999999999999
Q ss_pred cCccEEEecCCCCCC-------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH---HHhhHHHHHHcCCcEEecC
Q 014177 107 RDVDLVVHAAGPFQQ-------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR---AKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 107 ~~~DvVi~~agp~~~-------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~---~~~~~~~a~~~g~~~i~~~ 169 (429)
+++|+|||+|+.... .++.+++++|.+.+++ +|.+|+...|... ...+.+. .+. ..
T Consensus 76 ~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~-----~~~--~~ 148 (347)
T 4id9_A 76 MGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTED-----HPL--CP 148 (347)
T ss_dssp TTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTT-----SCC--CC
T ss_pred hCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCC-----CCC--CC
Confidence 999999999986532 1357899999999984 5666655444220 0012111 111 12
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeec
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTA 205 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~ 205 (429)
...|+.+|+.++.+++.+.++.+.++..+|.. ..+
T Consensus 149 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~-~v~ 183 (347)
T 4id9_A 149 NSPYGLTKLLGEELVRFHQRSGAMETVILRFS-HTQ 183 (347)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHSSSEEEEEEEC-EEE
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCceEEEccc-eEe
Confidence 34599999999999999887778888899984 567
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=9.6e-16 Score=150.22 Aligned_cols=186 Identities=17% Similarity=0.183 Sum_probs=129.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHh-CCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTL-GKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
||+||||||+||||+++++.|++++++++|++.+|+.. ..+.+ ..+ ..+++++.+|++|.+++.++++++|+||||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAAKADAIVHY 82 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH-hhhccCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence 57999999999999999999999755789999998652 11111 122 246889999999999999999999999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-------------HhhHHHHHHcCCcEEe
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-------------KSFKDRAIAANIPAIT 167 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-------------~~~~~~a~~~g~~~i~ 167 (429)
|+.... .++.+++++|.+.++++|.+|+...|.... ..++|. .+.
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-----~~~-- 155 (348)
T 1oc2_A 83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-----TNY-- 155 (348)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-----SCC--
T ss_pred CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCC-----CCC--
Confidence 986531 235788999999888778877655442110 011111 011
Q ss_pred cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCe
Q 014177 168 TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 168 ~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
.....|+.+|..++.+++.+.++++.++..+|. ...+|++......+...+. ..+.+..++.+|.
T Consensus 156 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (348)
T 1oc2_A 156 NPSSPYSSTKAASDLIVKAWVRSFGVKATISNC-SNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK 222 (348)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEee-ceeeCCCCCccchHHHHHHHHHcCCCceEecCCC
Confidence 122459999999999999887777888888998 4578887643333332222 2344555555554
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.62 E-value=6e-16 Score=152.89 Aligned_cols=190 Identities=21% Similarity=0.217 Sum_probs=130.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH----------HHHHHhCCCcEEEEeeCCChHHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA----------AMVSTLGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~----------~l~~~l~~~v~~~~~Dl~d~~~l~~ 104 (429)
+++++|+||||||+||||+++++.|++.+.|++|++.+|+..... ......+.++.++++|++|.+++.+
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 346789999999999999999999999322899999999664110 1111112457899999999999999
Q ss_pred H-hcCccEEEecCCCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC
Q 014177 105 A-LRDVDLVVHAAGPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG 170 (429)
Q Consensus 105 ~-~~~~DvVi~~agp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g 170 (429)
+ ..++|+|||||+.... .++.+++++|.+.++++|.+|+...|......++|. .+ ....
T Consensus 86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~~~~E~-----~~--~~p~ 158 (362)
T 3sxp_A 86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNVVG-----KN--ESPE 158 (362)
T ss_dssp HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCSSBCTT-----SC--CCCS
T ss_pred hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCCCCCCC-----CC--CCCC
Confidence 8 7899999999985431 246789999999999988777654442211122211 01 1123
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc----cHHHHHHH--HhCCceEEeeCCeE
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----TILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
..|+.||..++.+++.+.++ .++..+|+ .+.+|++.... ..+...+. ..+.+..++.+|..
T Consensus 159 ~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~-~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 225 (362)
T 3sxp_A 159 NVYGFSKLCMDEFVLSHSND--NVQVGLRY-FNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQ 225 (362)
T ss_dssp SHHHHHHHHHHHHHHHTTTT--SCEEEEEE-CSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCC
T ss_pred ChhHHHHHHHHHHHHHHhcc--CCEEEEEe-CceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCe
Confidence 45999999999999987644 56778887 56789886432 23333332 23455666666653
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.3e-15 Score=146.03 Aligned_cols=187 Identities=18% Similarity=0.129 Sum_probs=131.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch----hHHHHHHHhC----CCcEEEEeeCCChHHHHHHhcC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE----KGAAMVSTLG----KNSEFAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~----~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~~ 108 (429)
+++|+||||||+||||+++++.|+++ |++|++.+|+.. +++.+.+.+. .+++++++|++|.+++.+++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 102 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG 102 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcC
Confidence 56789999999999999999999997 789999999753 3444433321 4688999999999999999999
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCC
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~ 171 (429)
+|+|||||+.... .++.+++++|.+.++. +|.+|+...|.... ..++|. .+ .....
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~-----~~--~~~~~ 175 (352)
T 1sb8_A 103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TI--GKPLS 175 (352)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CC--CCCCS
T ss_pred CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCC-----CC--CCCCC
Confidence 9999999986431 2457889999999875 56666554442110 011111 01 11224
Q ss_pred ccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc----cHHHHHHH--HhCCceEEeeCCe
Q 014177 172 YPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----TILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
.|+.+|..++.+++.+.++++.++..+|. ...+|++.... ..+...+. ..+.+..++.+|.
T Consensus 176 ~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 242 (352)
T 1sb8_A 176 PYAVTKYVNELYADVFSRCYGFSTIGLRY-FNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGE 242 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCEEEEE-CCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSC
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEEE-CceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCC
Confidence 59999999999999887777889999998 45788875432 23332222 2355666666654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-16 Score=144.64 Aligned_cols=157 Identities=10% Similarity=0.025 Sum_probs=115.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
||+|+|+||+|++|+++++.|+++ |++|++.+|+.++.+.+ ..+++++++|++|.+++.++++++|+||||+|+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIE----NEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCC----CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhc----cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 579999999999999999999997 79999999998765432 246899999999999999999999999999987
Q ss_pred CCC---------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 119 FQQ---------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 119 ~~~---------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
... .++.+++++|.+.+++ +|.+|+...+........+ . .+. .....|+.+|..++.+++.+.
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~---~--~~~--~p~~~Y~~sK~~~e~~~~~~~ 150 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLM---D--SGE--VPENILPGVKALGEFYLNFLM 150 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGG---G--TTC--SCGGGHHHHHHHHHHHHHTGG
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccc---c--CCc--chHHHHHHHHHHHHHHHHHHh
Confidence 532 2467899999999984 5666655433211111101 0 011 112458999999998988887
Q ss_pred hhcCCCCeEEEEEeeecCCCC
Q 014177 189 NESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 189 ~~~~~~v~~i~~~~~~~G~~~ 209 (429)
++.+.++..+|.. ..+|++.
T Consensus 151 ~~~~~~~~ilrp~-~v~g~~~ 170 (227)
T 3dhn_A 151 KEKEIDWVFFSPA-ADMRPGV 170 (227)
T ss_dssp GCCSSEEEEEECC-SEEESCC
T ss_pred hccCccEEEEeCC-cccCCCc
Confidence 6667777777873 4566654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=2.7e-14 Score=140.33 Aligned_cols=153 Identities=23% Similarity=0.275 Sum_probs=117.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
..+++|+||||||+|++|+++++.|+++ +|+ +|++.+|+..+...+...+. .++.++.+|++|.+++.++++++|+|
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~V 95 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDIC 95 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH-CCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh-CCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence 3466799999999999999999999986 255 99999999988877766654 46899999999999999999999999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
||+|+.... .++.+++++|.+.++.. |.+|+...+ .+ ...||.|
T Consensus 96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~---------------~p-----~~~Y~~s 155 (344)
T 2gn4_A 96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA---------------NP-----INLYGAT 155 (344)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS---------------SC-----CSHHHHH
T ss_pred EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC---------------CC-----ccHHHHH
Confidence 999986531 23468899999998854 556543221 01 2459999
Q ss_pred HHHHHHHHHHHHhh---cCCCCeEEEEEeeecCCCC
Q 014177 177 NVMAAELVRVARNE---SKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 177 ~~~a~~~~~~~~~~---~~~~v~~i~~~~~~~G~~~ 209 (429)
|..++.+++.+.++ .+.++..+|. .+++|+.+
T Consensus 156 K~~~E~~~~~~~~~~~~~g~~~~~vRp-g~v~g~~~ 190 (344)
T 2gn4_A 156 KLCSDKLFVSANNFKGSSQTQFSVVRY-GNVVGSRG 190 (344)
T ss_dssp HHHHHHHHHHGGGCCCSSCCEEEEECC-CEETTCTT
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEEe-ccEECCCC
Confidence 99999999887653 3455667776 45677654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-15 Score=144.34 Aligned_cols=157 Identities=17% Similarity=0.194 Sum_probs=118.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|++|+|+||||+|+||+++++.|+++ |++|++.+|+..+.. ..+++++.+|++|.+++.++++++|+|||||
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A 72 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLDPA------GPNEECVQCDLADANAVNAMVAGCDGIVHLG 72 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCCCC------CTTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCcccc------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence 35678999999999999999999997 899999999876543 2468999999999999999999999999999
Q ss_pred CCCCC-----------CchHHHHHHHHHcCCc-EEEeCCChhHHH--HHHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 117 GPFQQ-----------APKCTVLEAAIETKTA-YIDVCDDTIYSQ--RAKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 117 gp~~~-----------~~~~~v~~aa~~~gv~-~vdis~~~~~~~--~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
|.... .++.+++++|.+.++. .|.+|+...+.. ....+.+. .+ ......|+.||..++.
T Consensus 73 g~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~-----~~--~~~~~~Y~~sK~~~e~ 145 (267)
T 3rft_A 73 GISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPD-----VP--ARPDGLYGVSKCFGEN 145 (267)
T ss_dssp SCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTT-----SC--CCCCSHHHHHHHHHHH
T ss_pred CCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCC-----CC--CCCCChHHHHHHHHHH
Confidence 86432 2457889999999874 566665444311 00011111 11 1122459999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+++.+.++++.++..+|+. ..+++..
T Consensus 146 ~~~~~a~~~g~~~~~vr~~-~v~~~~~ 171 (267)
T 3rft_A 146 LARMYFDKFGQETALVRIG-SCTPEPN 171 (267)
T ss_dssp HHHHHHHHHCCCEEEEEEC-BCSSSCC
T ss_pred HHHHHHHHhCCeEEEEEee-cccCCCC
Confidence 9998888888888889984 4555543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.9e-15 Score=146.08 Aligned_cols=187 Identities=18% Similarity=0.216 Sum_probs=126.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHh--CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTL--GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++|+||||||+||||+++++.|++++.+++|++.+|+.. ..+.+. .+ ..+++++.+|++|.+++.+++.++|+||
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 80 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLK-DLEDDPRYTFVKGDVADYELVKELVRKVDGVV 80 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHh-hhccCCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence 457899999999999999999999844589999998642 222221 11 2468899999999999999999999999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCC--cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccch
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKT--AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv--~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
|||+.... .++.+++++|.+.+. ++|.+|+...|.... ..++|. . + ......|+.
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~---~--~--~~~~~~Y~~ 153 (336)
T 2hun_A 81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEN---D--R--LMPSSPYSA 153 (336)
T ss_dssp ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTT---B--C--CCCCSHHHH
T ss_pred ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCC---C--C--CCCCCccHH
Confidence 99987531 245688999998874 667777554432110 011111 0 1 112245999
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCe
Q 014177 176 SNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
||..++.+++.+.++++.++..+|. .+.+|+.......+...+. ..+.++.++.+|.
T Consensus 154 sK~~~e~~~~~~~~~~~~~~~ilrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (336)
T 2hun_A 154 TKAASDMLVLGWTRTYNLNASITRC-TNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGK 212 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEE-CEEESTTCCTTSHHHHHHHHHHTTCCEEEETC--
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEee-eeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCC
Confidence 9999999999988777888888998 4678887643333333332 2244555555543
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-15 Score=145.32 Aligned_cols=162 Identities=19% Similarity=0.305 Sum_probs=118.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH----hCCCcEEEEeeCCChHHHHHHhc--CccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST----LGKNSEFAEVNIYNEGSLLMALR--DVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~--~~Dv 111 (429)
++|+||||||+||||+++++.|+++ |++|++.+|+.++.....+. .+.++.++++|++|.+++.++++ ++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence 4579999999999999999999997 89999999977654433332 24578999999999999999998 8999
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
|||||+.... .++.+++++|.+.++. .|.+|+...|.... ..+++. .+ ......|+
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~--~~~~~~Y~ 154 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDET-----FP--LSATNPYG 154 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTT-----SC--CBCSSHHH
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCC-----CC--CCCCChhH
Confidence 9999986431 2356788999998874 56666544331100 011111 11 11224599
Q ss_pred hhHHHHHHHHHHHHhhcC-CCCeEEEEEeeecCCCC
Q 014177 175 VSNVMAAELVRVARNESK-GEPERLRFSYYTAGTGG 209 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~-~~v~~i~~~~~~~G~~~ 209 (429)
.||..++.+++.+.+++. .++..+|. .+.+|+++
T Consensus 155 ~sK~~~e~~~~~~~~~~~~~~~~~lRp-~~v~G~~~ 189 (341)
T 3enk_A 155 QTKLMAEQILRDVEAADPSWRVATLRY-FNPVGAHE 189 (341)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEE-CEEECCCT
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEee-ccccCCcc
Confidence 999999999998877665 67788888 56788754
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=8.4e-15 Score=146.44 Aligned_cols=170 Identities=18% Similarity=0.141 Sum_probs=115.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH--------------------HHHHHHhCCCcEEEEeeC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG--------------------AAMVSTLGKNSEFAEVNI 96 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~--------------------~~l~~~l~~~v~~~~~Dl 96 (429)
.++++||||||+||||+++++.|+++ |++|++.+|+.... ..+......+++++.+|+
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 46789999999999999999999997 89999999864321 111112235688999999
Q ss_pred CChHHHHHHhcC--ccEEEecCCCCCC------------------CchHHHHHHHHHcCC--cEEEeCCChhHHHHHHhh
Q 014177 97 YNEGSLLMALRD--VDLVVHAAGPFQQ------------------APKCTVLEAAIETKT--AYIDVCDDTIYSQRAKSF 154 (429)
Q Consensus 97 ~d~~~l~~~~~~--~DvVi~~agp~~~------------------~~~~~v~~aa~~~gv--~~vdis~~~~~~~~~~~~ 154 (429)
+|.+++.+++++ +|+||||||.... .++.+++++|.+.++ +.|.+|+...|......+
T Consensus 87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~ 166 (404)
T 1i24_A 87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDI 166 (404)
T ss_dssp TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCB
T ss_pred CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCC
Confidence 999999999886 9999999986421 135678999998885 567777654442110011
Q ss_pred HHHHH---HcCCc----EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 155 KDRAI---AANIP----AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 155 ~~~a~---~~g~~----~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.+..- ..+.. .-......|+.||..++.+++.+.++++.++..+|. .+++|++.
T Consensus 167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp-~~v~Gp~~ 227 (404)
T 1i24_A 167 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQ-GVVYGVKT 227 (404)
T ss_dssp CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CEEECSCC
T ss_pred CccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEec-ceeeCCCC
Confidence 10000 00000 001123459999999999998887777888889998 56788875
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.56 E-value=6e-15 Score=144.06 Aligned_cols=160 Identities=15% Similarity=0.088 Sum_probs=115.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++|+|+||||+||+|+++++.|+++ |++|++.+|+..+.+.+.+ .+++++.+|++|.+++.++++++|+|||||+
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAY---LEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGG---GCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhcc---CCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 3469999999999999999999997 7999999998876544321 2688999999999999999999999999998
Q ss_pred CCCC-------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHH--hhHHHHHHcCCcEEecC--CCccchhHHH
Q 014177 118 PFQQ-------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAK--SFKDRAIAANIPAITTG--GIYPGVSNVM 179 (429)
Q Consensus 118 p~~~-------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~--g~~pG~s~~~ 179 (429)
.... .++.+++++|.+.++ ++|.+|+...|..... ..+|. .+..+.. ...|+.+|..
T Consensus 87 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~-----~~~~p~~~~~~~Y~~sK~~ 161 (342)
T 2x4g_A 87 YYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEG-----LFYDSLPSGKSSYVLCKWA 161 (342)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTT-----CCCSSCCTTSCHHHHHHHH
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCC-----CCCCccccccChHHHHHHH
Confidence 5431 135689999999986 5677776554421110 01111 1111100 3469999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
++.+++.+.++ +.++..+|. ...+|+..
T Consensus 162 ~e~~~~~~~~~-g~~~~ilrp-~~v~g~~~ 189 (342)
T 2x4g_A 162 LDEQAREQARN-GLPVVIGIP-GMVLGELD 189 (342)
T ss_dssp HHHHHHHHHHT-TCCEEEEEE-CEEECSCC
T ss_pred HHHHHHHHhhc-CCcEEEEeC-CceECCCC
Confidence 99999988765 788889998 45688765
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-14 Score=141.16 Aligned_cols=185 Identities=21% Similarity=0.242 Sum_probs=126.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHc-CCC---ceEEEEecCch--hHHHHHHHh--CCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKL-CPD---LQIVVGSRNRE--KGAAMVSTL--GKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~-~~g---~~v~v~~R~~~--~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
|+||||||+||||+++++.|+++ +++ ++|++.+|+.. ..+.+. .+ ..+++++++|++|.+++.+++.++|+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 79 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA-PVDADPRLRFVHGDIRDAGLLARELRGVDA 79 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG-GGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh-hcccCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence 47999999999999999999984 446 89999998642 111111 12 24688999999999999999999999
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
|||||+.... .++.+++++|.+.++ ++|.+|+...|.... ..+++. .+. .....|+
T Consensus 80 Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~--~~~~~Y~ 152 (337)
T 1r6d_A 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPL--EPNSPYA 152 (337)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCC--CCCSHHH
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCC-----CCC--CCCCchH
Confidence 9999986531 245788999999998 556666544432110 011111 011 1224599
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCe
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
.||..++.+++.+.++++.++..+|. .+.+|++......+...+. ..+.+..++.+|.
T Consensus 153 ~sK~~~e~~~~~~~~~~g~~~~ilrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (337)
T 1r6d_A 153 ASKAGSDLVARAYHRTYGLDVRITRC-CNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212 (337)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEE-CEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEe-eeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCC
Confidence 99999999999888777888889998 4678887644333333332 2344555555554
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.9e-14 Score=140.42 Aligned_cols=168 Identities=15% Similarity=0.112 Sum_probs=116.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH---HHHHHH-hCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG---AAMVST-LGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~---~~l~~~-l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+|+||||||+||||+++++.|+++ |++|++..|+.++. ..+... ...+++++++|++|.+++.++++++|+|||
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 689999999999999999999997 89999888876542 211111 113678899999999999999999999999
Q ss_pred cCCCCCC--------------CchHHHHHHHHHcC-CcE-EEeCCChhHHHHHH-----hhHHHHHHcCCcE---EecCC
Q 014177 115 AAGPFQQ--------------APKCTVLEAAIETK-TAY-IDVCDDTIYSQRAK-----SFKDRAIAANIPA---ITTGG 170 (429)
Q Consensus 115 ~agp~~~--------------~~~~~v~~aa~~~g-v~~-vdis~~~~~~~~~~-----~~~~~a~~~g~~~---i~~~g 170 (429)
+|++... .++.+++++|.+.+ +.. |.+|+...++.... .++|.. ...... .....
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~-~~~~~~~~~~~~~~ 165 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKN-WTDIEFLTSAKPPT 165 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTT-TTCC-------CCC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhh-ccchhhccccCCcc
Confidence 9986421 14578899999986 655 55554443332211 111110 000000 00012
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+.|+.||.+++.++..+.++++.++..+|. .+++|+...
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp-~~v~Gp~~~ 204 (338)
T 2rh8_A 166 WGYPASKTLAEKAAWKFAEENNIDLITVIP-TLMAGSSLT 204 (338)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHTCCEEEEEE-CEEESCCSS
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeC-CceECCCCC
Confidence 369999999999998887667888999998 567898754
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2e-14 Score=143.01 Aligned_cols=187 Identities=17% Similarity=0.139 Sum_probs=128.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.+||+|+||||+||||+++++.|+++ +++|++.+|+..+..... ..+++++++|++|.+++.++++++|+|||||
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~---~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A 101 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTED---MFCDEFHLVDLRVMENCLKVTEGVDHVFNLA 101 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGG---GTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccchhhc---cCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence 35789999999999999999999997 799999999876532211 1368899999999999999999999999999
Q ss_pred CCCCC----------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHH------hhHHHHHHcCCcEEecCCCcc
Q 014177 117 GPFQQ----------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAK------SFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 117 gp~~~----------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~------~~~~~a~~~g~~~i~~~g~~p 173 (429)
+.... .++.+++++|.+.++ ++|.+|+...|..... .++|.. ..+ ......|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~---~~~--~~~~~~Y 176 (379)
T 2c5a_A 102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESD---AWP--AEPQDAF 176 (379)
T ss_dssp CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGG---GSS--BCCSSHH
T ss_pred eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCccc---CCC--CCCCChh
Confidence 86431 134688999999998 4566665443321100 011110 001 1122459
Q ss_pred chhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc----cHHHHHHHH--hCCc-eEEeeCCeE
Q 014177 174 GVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----TILATSFLL--LGEE-VVAYNKGEE 234 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----~~~~~~~~~--~~~~-~~v~~~G~~ 234 (429)
+.+|..++.+++.+.++++.++..+|. ...+|++.... ..+...+.. .+.+ +.++.+|..
T Consensus 177 ~~sK~~~E~~~~~~~~~~gi~~~ilrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 243 (379)
T 2c5a_A 177 GLEKLATEELCKHYNKDFGIECRIGRF-HNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ 243 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEe-CceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCe
Confidence 999999999999887777888888998 45688765321 133333322 2444 666666643
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=9e-15 Score=145.35 Aligned_cols=167 Identities=18% Similarity=0.145 Sum_probs=117.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.+++|+|+||||+||||+++++.|+++ + ++|++.+|+......... ...+++++++|++|.+++.++++++|+|||
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih 105 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAEKINVP-DHPAVRFSETSITDDALLASLQDEYDYVFH 105 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCCGGGSC-CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCchhhcc-CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence 467789999999999999999999997 7 899999997654211000 024688999999999999999999999999
Q ss_pred cCCCCCC---------------CchHHHHHHHHHc-CC-cEEEeCCChhHHHHHH-hhHHHHHHcCC--cEEecCCCccc
Q 014177 115 AAGPFQQ---------------APKCTVLEAAIET-KT-AYIDVCDDTIYSQRAK-SFKDRAIAANI--PAITTGGIYPG 174 (429)
Q Consensus 115 ~agp~~~---------------~~~~~v~~aa~~~-gv-~~vdis~~~~~~~~~~-~~~~~a~~~g~--~~i~~~g~~pG 174 (429)
||+.... .++.+++++|.+. ++ ++|.+|+...|..... .+.. .+... +. ......|+
T Consensus 106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~--~E~~~~~~~-~~~~~~Y~ 182 (377)
T 2q1s_A 106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKA--TEETDIVSL-HNNDSPYS 182 (377)
T ss_dssp CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC----------------CCCCCCCS-SCCCSHHH
T ss_pred CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCc--ccccccccc-cCCCCchH
Confidence 9986531 2457889999988 87 5566666554432111 1110 01100 10 01224599
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.+|..++.+++.+.++++.++..+|. ...+|++.
T Consensus 183 ~sK~~~E~~~~~~~~~~gi~~~ilRp-~~v~G~~~ 216 (377)
T 2q1s_A 183 MSKIFGEFYSVYYHKQHQLPTVRARF-QNVYGPGE 216 (377)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEE-CCEECTTC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEee-ccEECCCC
Confidence 99999999999887777888999998 56788875
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.55 E-value=5e-14 Score=115.71 Aligned_cols=111 Identities=21% Similarity=0.279 Sum_probs=94.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++++|+|+|+ |++|+.+++.|.+. + ++|++.+|++++++.+.. ..+..+.+|+.+.+.+.+.++++|+||||+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNR---MGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHT---TTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHh---CCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 4579999998 99999999999997 6 899999999988877652 457889999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHH
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDR 157 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~ 157 (429)
++.. ..+++++|.+.|++++|++++.........+++.
T Consensus 78 ~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 115 (118)
T 3ic5_A 78 PFFL---TPIIAKAAKAAGAHYFDLTEDVAATNAVRALVED 115 (118)
T ss_dssp CGGG---HHHHHHHHHHTTCEEECCCSCHHHHHHHHHHHHC
T ss_pred Cchh---hHHHHHHHHHhCCCEEEecCcHHHHHHHHHHHHh
Confidence 7543 3789999999999999999988876655555443
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-14 Score=142.11 Aligned_cols=159 Identities=16% Similarity=0.195 Sum_probs=114.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDL 111 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~Dv 111 (429)
++.+++|+||||||+|+||+++++.|+++ |++|++.+|+.....+..+.+ .+++++.+|++|.+++.++++ ++|+
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 44577899999999999999999999997 799999999754432211222 368899999999999999998 9999
Q ss_pred EEecCCCCCC------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHH---hhHHHHHHcCCcEEecCCCccch
Q 014177 112 VVHAAGPFQQ------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAK---SFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 112 Vi~~agp~~~------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~---~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
||||||.... .++.+++++|.+.++ ++|.+|+...|..... .++|.. .....|+.
T Consensus 92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~---------~~~~~Y~~ 162 (330)
T 2pzm_A 92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT---------APFTSYGI 162 (330)
T ss_dssp EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC---------CCCSHHHH
T ss_pred EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC---------CCCChHHH
Confidence 9999986532 235688999999887 5566665544321100 111110 12245999
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 176 SNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+|..++.+++.+ ..+...+|. .+.+||+.
T Consensus 163 sK~~~e~~~~~~----~~~~~~iR~-~~v~gp~~ 191 (330)
T 2pzm_A 163 SKTAGEAFLMMS----DVPVVSLRL-ANVTGPRL 191 (330)
T ss_dssp HHHHHHHHHHTC----SSCEEEEEE-CEEECTTC
T ss_pred HHHHHHHHHHHc----CCCEEEEee-eeeECcCC
Confidence 999999888743 456677886 46688875
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.6e-14 Score=139.63 Aligned_cols=162 Identities=17% Similarity=0.142 Sum_probs=115.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhcC--ccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALRD--VDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi 113 (429)
||+||||||+||||+++++.|+++ |++|++.+|+. .........+ .++++++++|++|.+++.+++++ +|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF 78 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence 478999999999999999999997 89999999853 2222111212 13588999999999999999987 99999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCc--EEEeCCChhHHHHHH-h----------------hHHHHH
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTA--YIDVCDDTIYSQRAK-S----------------FKDRAI 159 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~--~vdis~~~~~~~~~~-~----------------~~~~a~ 159 (429)
|||+.... .++.+++++|.+.+++ +|.+|+...|..... . +++.
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~-- 156 (347)
T 1orr_A 79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES-- 156 (347)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT--
T ss_pred ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc--
Confidence 99986431 2356889999998875 677776554421100 0 0000
Q ss_pred HcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 160 AANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 160 ~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.+ ......|+.+|..++.+++.+.++++.++..+|. ...+|+...
T Consensus 157 ---~~--~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp-~~v~g~~~~ 201 (347)
T 1orr_A 157 ---TQ--LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRH-SSMYGGRQF 201 (347)
T ss_dssp ---SC--CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEECTTCC
T ss_pred ---CC--CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEcc-CceeCcCCC
Confidence 00 0122459999999999999887777888888998 456887653
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.7e-14 Score=137.64 Aligned_cols=169 Identities=14% Similarity=0.114 Sum_probs=115.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH--HhC---CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS--TLG---KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~--~l~---~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
++++||||||+||||+++++.|+++ |++|++.+|+.+..+++.. .+. .+++++++|++|.+++.++++++|+|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 81 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV 81 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence 5689999999999999999999997 8999998998774433221 121 24788999999999999999999999
Q ss_pred EecCCCCCC--------------CchHHHHHHHHHcC-CcE-EEeCCChhHHHHH---HhhHHHHHHcCCc---EEecCC
Q 014177 113 VHAAGPFQQ--------------APKCTVLEAAIETK-TAY-IDVCDDTIYSQRA---KSFKDRAIAANIP---AITTGG 170 (429)
Q Consensus 113 i~~agp~~~--------------~~~~~v~~aa~~~g-v~~-vdis~~~~~~~~~---~~~~~~a~~~g~~---~i~~~g 170 (429)
||+|++... .++.+++++|.+.+ +.. |.+|+...++... ..++|.. ..... ......
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~-~~~~~~~~~~~~~~ 160 (337)
T 2c29_D 82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESC-WSDMEFCRAKKMTA 160 (337)
T ss_dssp EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTC-CCCHHHHHHHCCTT
T ss_pred EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCccc-CCchhhhcccCCcc
Confidence 999986421 13567899999887 654 5555544332110 0011100 00000 000013
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+.|+.||.+++.++..+.++++.++..+|. .+++|+...
T Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp-~~v~Gp~~~ 199 (337)
T 2c29_D 161 WMYFVSKTLAEQAAWKYAKENNIDFITIIP-TLVVGPFIM 199 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEE-CEEESCCSC
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeC-CceECCCCC
Confidence 459999999999998887667888999998 567888753
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-14 Score=139.36 Aligned_cols=158 Identities=20% Similarity=0.195 Sum_probs=114.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC--ccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD--VDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi~ 114 (429)
.++++||||||+||||+++++.|+++ |++|++.+|+... +. + ++.++.+|++|.+++.+++++ +|+|||
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~----l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 80 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA-KL----P--NVEMISLDIMDSQRVKKVISDIKPDYIFH 80 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC-CC----T--TEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc-cc----c--eeeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 45689999999999999999999997 7999999998764 21 2 578899999999999999885 999999
Q ss_pred cCCCCCC---------------CchHHHHHHHHHc-CC-cEEEeCCChhHHHH---HHhhHHHHHHcCCcEEecCCCccc
Q 014177 115 AAGPFQQ---------------APKCTVLEAAIET-KT-AYIDVCDDTIYSQR---AKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 115 ~agp~~~---------------~~~~~v~~aa~~~-gv-~~vdis~~~~~~~~---~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
||+.... .++.+++++|.+. ++ ++|.+|+...|... ...++|. .+. .....|+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~-----~~~--~~~~~Y~ 153 (321)
T 2pk3_A 81 LAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEE-----NQL--RPMSPYG 153 (321)
T ss_dssp CCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTT-----SCC--BCCSHHH
T ss_pred cCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCC-----CCC--CCCCccH
Confidence 9986531 1357789999775 34 55666655443211 0112111 011 1224599
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
.+|..++.+++.+.++++.++..+|. .+.+|++...
T Consensus 154 ~sK~~~E~~~~~~~~~~gi~~~ilrp-~~v~g~~~~~ 189 (321)
T 2pk3_A 154 VSKASVGMLARQYVKAYGMDIIHTRT-FNHIGPGQSL 189 (321)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEE-CEEECTTCCT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEe-CcccCcCCCC
Confidence 99999999999887777788888998 4678887654
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=7e-15 Score=141.78 Aligned_cols=178 Identities=16% Similarity=0.153 Sum_probs=122.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+||||||+||||+++++.|+++ |++|++.+|+.+...... ..+++++.+|+.|.+ +.+++++ |+|||||+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~---~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~ 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRREFV---NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANP 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCGGGS---CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCchhhc---CCCceEEECccccHH-HHhhcCC-CEEEECCCCC
Confidence 58999999999999999999997 899999999876543221 356899999999998 8888888 9999999853
Q ss_pred CC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 120 QQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 120 ~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
.. .++.+++++|.+.++. +|.+|+...|.... ..+++. .+. .....|+.+|..++.
T Consensus 74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~--~p~~~Y~~sK~~~e~ 146 (312)
T 3ko8_A 74 EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEE-----EPY--KPISVYGAAKAAGEV 146 (312)
T ss_dssp SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCC--CCCSHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCC-----CCC--CCCChHHHHHHHHHH
Confidence 21 1356889999999984 56666554442110 011111 111 112459999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH---HhCCceEEeeCCe
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL---LLGEEVVAYNKGE 233 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~---~~~~~~~v~~~G~ 233 (429)
+++.+.++++.++..+|. .+.+|++.... .+...+. ....++.++.+|.
T Consensus 147 ~~~~~~~~~g~~~~~lrp-~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~ 198 (312)
T 3ko8_A 147 MCATYARLFGVRCLAVRY-ANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGT 198 (312)
T ss_dssp HHHHHHHHHCCEEEEEEE-CEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----
T ss_pred HHHHHHHHhCCCEEEEee-ccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCC
Confidence 999988878888889998 46788875432 2222222 1224555566654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-14 Score=140.52 Aligned_cols=157 Identities=16% Similarity=0.213 Sum_probs=115.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
||+|+||||+||||+++++.|+++ |++|++.+|+..... +.+..+++++++|++|.+++.++++ ++|+|||+|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a 75 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHE---DAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA 75 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCG---GGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCch---hhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence 478999999999999999999997 799999998764322 2233468899999999999999998 899999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
+.... .++.+++++|.+.++. +|.+|+...|.... ..++|. .+. .....|+.+|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~-----~~~--~~~~~Y~~sK~~ 148 (330)
T 2c20_A 76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEE-----TMT--NPTNTYGETKLA 148 (330)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTT-----SCC--CCSSHHHHHHHH
T ss_pred cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcC-----CCC--CCCChHHHHHHH
Confidence 86531 2456889999999875 56666554432110 011111 111 122459999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCC
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~ 208 (429)
++.+++.+.++++.++..+|. .+.+|++
T Consensus 149 ~e~~~~~~~~~~~~~~~ilrp-~~v~G~~ 176 (330)
T 2c20_A 149 IEKMLHWYSQASNLRYKIFRY-FNVAGAT 176 (330)
T ss_dssp HHHHHHHHHHTSSCEEEEEEC-SEEECCC
T ss_pred HHHHHHHHHHHhCCcEEEEec-CcccCCC
Confidence 999999888777778888887 4668875
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-14 Score=139.18 Aligned_cols=185 Identities=17% Similarity=0.212 Sum_probs=125.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
|+||||||+||||+++++.|++. .+++|++.+|+. ...+.+.+.. ..+++++.+|++|.+++.++++ ++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKN-TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH-CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhc-CCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 47999999999999999999985 368999999865 2222221111 2368899999999999999998 8999999
Q ss_pred cCCCCCC---------------CchHHHHHHHHHc--CC--------cEEEeCCChhHHHHH---H--------hhHHHH
Q 014177 115 AAGPFQQ---------------APKCTVLEAAIET--KT--------AYIDVCDDTIYSQRA---K--------SFKDRA 158 (429)
Q Consensus 115 ~agp~~~---------------~~~~~v~~aa~~~--gv--------~~vdis~~~~~~~~~---~--------~~~~~a 158 (429)
||+.... .++.+++++|.+. ++ ++|.+|+...|.... . .++|.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~- 158 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET- 158 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT-
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC-
Confidence 9986531 2457889999988 75 566676544332110 0 11111
Q ss_pred HHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCe
Q 014177 159 IAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 159 ~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
.+. .....|+.||..++.+++.+.++++.++..+|. ..++|+.......+...+. ..+.++.++.+|.
T Consensus 159 ----~~~--~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (361)
T 1kew_A 159 ----TAY--APSSPYSASKASSDHLVRAWRRTYGLPTIVTNC-SNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD 228 (361)
T ss_dssp ----SCC--CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-CEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred ----CCC--CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEee-ceeECCCCCcccHHHHHHHHHHcCCCceEcCCCc
Confidence 011 123459999999999999988777888899998 4678887643333333222 2344555555553
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2.8e-14 Score=139.29 Aligned_cols=164 Identities=13% Similarity=0.123 Sum_probs=116.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC-hHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN-EGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d-~~~l~~~~~~~DvVi~~agp 118 (429)
|+|+||||+||||+++++.|+++ ++++|++.+|+.++.+.+.. ..+++++++|++| .+.+.++++++|+|||||+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~ 77 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 77 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHS-TTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHhhc--CCCeEEEeccccCcHHHHHhhccCCCEEEEcccc
Confidence 58999999999999999999985 36899999998876543321 1468899999998 45688888899999999985
Q ss_pred CCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEe--cCCCccchhHHHH
Q 014177 119 FQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAIT--TGGIYPGVSNVMA 180 (429)
Q Consensus 119 ~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~--~~g~~pG~s~~~a 180 (429)
... .++.+++++|.+.+.++|.+|+...|.... ..+++... ....-+ .....|+.+|..+
T Consensus 78 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~--~~~~~~~~~~~~~Y~~sK~~~ 155 (345)
T 2bll_A 78 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHS--NLIVGPVNKPRWIYSVSKQLL 155 (345)
T ss_dssp CCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTC--CCBCCCTTCGGGHHHHHHHHH
T ss_pred cCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCccc--ccccCcccCcccccHHHHHHH
Confidence 431 135678999999886677777655442110 01111100 000000 0113599999999
Q ss_pred HHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 181 AELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+.+++.+.++++.++..+|. ...+|++.
T Consensus 156 e~~~~~~~~~~~~~~~ilrp-~~v~G~~~ 183 (345)
T 2bll_A 156 DRVIWAYGEKEGLQFTLFRP-FNWMGPRL 183 (345)
T ss_dssp HHHHHHHHHHHCCCEEEEEE-CSEECSSC
T ss_pred HHHHHHHHHhcCCCEEEEcC-CcccCCCc
Confidence 99999887777888899998 56788875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-14 Score=140.66 Aligned_cols=181 Identities=15% Similarity=0.181 Sum_probs=122.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
||+||||||+||||+++++.|+++ |..+++..|+....+. +...++++.+|++| +++.++++++|+|||+|+.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~v~~~~~~~~~~~~----~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~ 73 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES--NEIVVIDNLSSGNEEF----VNEAARLVKADLAA-DDIKDYLKGAEEVWHIAAN 73 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT--SCEEEECCCSSCCGGG----SCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--CCEEEEEcCCCCChhh----cCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCC
Confidence 478999999999999999999997 6444444444443221 23568899999999 8899999999999999985
Q ss_pred CCC---------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 119 FQQ---------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 119 ~~~---------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
... .++.+++++|.+.++ ++|.+|+...|.... ..+.|. .+. .....|+.+|..++
T Consensus 74 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~--~~~~~Y~~sK~~~e 146 (313)
T 3ehe_A 74 PDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPED-----YPT--HPISLYGASKLACE 146 (313)
T ss_dssp CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTT-----SCC--CCCSHHHHHHHHHH
T ss_pred CChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCC-----CCC--CCCCHHHHHHHHHH
Confidence 321 145678999999987 456777655442110 011111 011 12245999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH---HhCCceEEeeCCeEE
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL---LLGEEVVAYNKGEEI 235 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~---~~~~~~~v~~~G~~~ 235 (429)
.+++.+.++++.++..+|. .+.+|++.... .+...+. ....++.++.+|+..
T Consensus 147 ~~~~~~~~~~g~~~~ilRp-~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ 201 (313)
T 3ehe_A 147 ALIESYCHTFDMQAWIYRF-ANVIGRRSTHG-VIYDFIMKLKRNPEELEILGNGEQN 201 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEC-SCEESTTCCCS-HHHHHHHHHHHCTTEEEESTTSCCE
T ss_pred HHHHHHHHhcCCCEEEEee-ccccCcCCCcC-hHHHHHHHHHcCCCceEEeCCCCeE
Confidence 9999988888888889998 56788875532 3332222 222456677777543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.51 E-value=6e-14 Score=130.00 Aligned_cols=154 Identities=19% Similarity=0.158 Sum_probs=108.0
Q ss_pred ccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc-EEEEeeCCChHHHHHHh
Q 014177 28 LDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS-EFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 28 ~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v-~~~~~Dl~d~~~l~~~~ 106 (429)
+|......++++|+|+||||+|++|+++++.|+++ |++|++.+|+.++++.+.. .++ +++++|++ +++.+.+
T Consensus 10 ~~~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~--~~~~~~~ 82 (236)
T 3e8x_A 10 HSSGRENLYFQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRE---RGASDIVVANLE--EDFSHAF 82 (236)
T ss_dssp -----------CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH---TTCSEEEECCTT--SCCGGGG
T ss_pred ccccccccCcCCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHh---CCCceEEEcccH--HHHHHHH
Confidence 34444556688999999999999999999999997 8999999999998877654 368 99999998 6688888
Q ss_pred cCccEEEecCCCCCC-----------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 107 RDVDLVVHAAGPFQQ-----------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 107 ~~~DvVi~~agp~~~-----------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
+++|+|||+||.... .++.+++++|.+.++.. |.+++...... . . .+ .....|+
T Consensus 83 ~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~---~------~--~~---~~~~~Y~ 148 (236)
T 3e8x_A 83 ASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP---D------Q--GP---MNMRHYL 148 (236)
T ss_dssp TTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG---G------G--SC---GGGHHHH
T ss_pred cCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC---C------C--Ch---hhhhhHH
Confidence 999999999987542 24578999999988754 55565322110 0 0 00 1123488
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCC
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGT 207 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~ 207 (429)
.+|..++.+++ +.+.++..+|.. ..+++
T Consensus 149 ~sK~~~e~~~~----~~gi~~~~lrpg-~v~~~ 176 (236)
T 3e8x_A 149 VAKRLADDELK----RSSLDYTIVRPG-PLSNE 176 (236)
T ss_dssp HHHHHHHHHHH----HSSSEEEEEEEC-SEECS
T ss_pred HHHHHHHHHHH----HCCCCEEEEeCC-cccCC
Confidence 99998888776 456777788874 34554
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-14 Score=129.65 Aligned_cols=148 Identities=16% Similarity=0.175 Sum_probs=109.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC-hHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN-EGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d-~~~l~~~~~~~DvVi~~agp 118 (429)
|+|+||||+|++|+++++.|+++ |++|++.+|+.++++.+ .+++++++|++| .+++.++++++|+||||||.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY-----NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC-----TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc-----CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 48999999999999999999997 79999999998765432 468999999999 99999999999999999986
Q ss_pred CCC-------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhh
Q 014177 119 FQQ-------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNE 190 (429)
Q Consensus 119 ~~~-------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~ 190 (429)
... .++.+++++|.+.++. +|.+++...+... ...+. . +.....|+.+|..++.+++ +.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~--~~~e~-~-------~~~~~~Y~~sK~~~e~~~~---~~ 140 (219)
T 3dqp_A 74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE--KWIGA-G-------FDALKDYYIAKHFADLYLT---KE 140 (219)
T ss_dssp TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG--GCCSH-H-------HHHTHHHHHHHHHHHHHHH---HS
T ss_pred CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC--ccccc-c-------cccccHHHHHHHHHHHHHH---hc
Confidence 532 2467899999999975 4566654332111 11110 0 0012348999999998885 25
Q ss_pred cCCCCeEEEEEeeecCCC
Q 014177 191 SKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 191 ~~~~v~~i~~~~~~~G~~ 208 (429)
.+.++..+|.. ..+|+.
T Consensus 141 ~~i~~~ilrp~-~v~g~~ 157 (219)
T 3dqp_A 141 TNLDYTIIQPG-ALTEEE 157 (219)
T ss_dssp CCCEEEEEEEC-SEECSC
T ss_pred cCCcEEEEeCc-eEecCC
Confidence 67777788874 445553
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=126.70 Aligned_cols=150 Identities=16% Similarity=0.154 Sum_probs=107.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHh-HcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALS-KLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~-~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++|++|+|+||+|++|+++++.|+ +. |++|++.+|+++ +++.+.. ...++.++++|++|.+++.++++++|+|||
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEII-DHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHH-TSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhcc-CCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 345679999999999999999999 65 899999999988 7766642 235789999999999999999999999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
++|..... ..++++++.+.++. +|.+++...+.............. . +..|+.+|..++.+++ +.+.
T Consensus 80 ~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~-~------~~~y~~~K~~~e~~~~----~~~i 147 (221)
T 3r6d_A 80 GAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDN-L------PISYVQGERQARNVLR----ESNL 147 (221)
T ss_dssp SCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHT-S------CHHHHHHHHHHHHHHH----HSCS
T ss_pred cCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccc-c------ccHHHHHHHHHHHHHH----hCCC
Confidence 99864222 57889999998874 566665443321100111111110 0 1148888888887775 3556
Q ss_pred CCeEEEEE
Q 014177 194 EPERLRFS 201 (429)
Q Consensus 194 ~v~~i~~~ 201 (429)
++..++..
T Consensus 148 ~~~~vrpg 155 (221)
T 3r6d_A 148 NYTILRLT 155 (221)
T ss_dssp EEEEEEEC
T ss_pred CEEEEech
Confidence 66666664
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=125.93 Aligned_cols=151 Identities=14% Similarity=0.095 Sum_probs=105.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+||||+|+||+++++.|+++ |++|++.+|++++++.+. .+++++++|++|.++ +.++++|+||||+|..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~----~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTH----KDINILQKDIFDLTL--SDLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHC----SSSEEEECCGGGCCH--HHHTTCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhcc----CCCeEEeccccChhh--hhhcCCCEEEECCcCC
Confidence 57999999999999999999997 799999999988776553 468999999999887 7788999999999874
Q ss_pred CC------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHH--hhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh-
Q 014177 120 QQ------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAK--SFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN- 189 (429)
Q Consensus 120 ~~------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~- 189 (429)
.. .++.+++++|.+.++ ++|.+++...++.... ...+. .+.. ....|+.+|..++.+. .+.+
T Consensus 73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-----~~~~--~~~~y~~~k~~~e~~~-~~~~~ 144 (221)
T 3ew7_A 73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLES-----KGLR--EAPYYPTARAQAKQLE-HLKSH 144 (221)
T ss_dssp TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC--------------------------CCCSCCHHHHHHHHH-HHHTT
T ss_pred ccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCcccccc-----CCCC--CHHHHHHHHHHHHHHH-HHHhh
Confidence 32 235788999998865 5566766555443221 11111 1111 1245899999988863 3333
Q ss_pred hcCCCCeEEEEEeeecCC
Q 014177 190 ESKGEPERLRFSYYTAGT 207 (429)
Q Consensus 190 ~~~~~v~~i~~~~~~~G~ 207 (429)
+.+.++..+|. ...+|+
T Consensus 145 ~~gi~~~ivrp-~~v~g~ 161 (221)
T 3ew7_A 145 QAEFSWTYISP-SAMFEP 161 (221)
T ss_dssp TTTSCEEEEEC-SSCCCC
T ss_pred ccCccEEEEeC-cceecC
Confidence 45667777777 345665
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=5.3e-14 Score=137.75 Aligned_cols=160 Identities=21% Similarity=0.271 Sum_probs=113.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch----------hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE----------KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~----------~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+|+|+||||+||||+++++.|+++ |++|++.+|+.. .++.+.+..+.+++++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence 579999999999999999999997 789999988532 2333332233568999999999999999998
Q ss_pred -CccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH-HHhhHHHHHHcCCcEEecC
Q 014177 108 -DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR-AKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 108 -~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~ 169 (429)
++|+|||||+.... .++.+++++|.+.++. +|.+|+...|... ...++|. .+..+ .
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~-----~~~~p-~ 153 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEA-----HPTGG-C 153 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCC-C
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCC-----CCCCC-C
Confidence 89999999986531 2456889999998875 5666654433210 0011111 11101 1
Q ss_pred CCccchhHHHHHHHHHHHHhhcC--CCCeEEEEEeeecCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESK--GEPERLRFSYYTAGTG 208 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~--~~v~~i~~~~~~~G~~ 208 (429)
...|+.+|..++.+++.+.++ + .++..+|. .+.+|++
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~-~~v~G~~ 192 (348)
T 1ek6_A 154 TNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRY-FNPTGAH 192 (348)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEE-CEEECCC
T ss_pred CCchHHHHHHHHHHHHHHHhc-CCCcceEEEee-ccccCCC
Confidence 245999999999999988765 4 56778887 5678874
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-13 Score=137.04 Aligned_cols=160 Identities=19% Similarity=0.205 Sum_probs=115.3
Q ss_pred CeEEEEcCChHHHHHHHHHHh-HcCCCceEEEEecCchh---------HHHHH---HHhC-----CC---cEEEEeeCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALS-KLCPDLQIVVGSRNREK---------GAAMV---STLG-----KN---SEFAEVNIYN 98 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~-~~~~g~~v~v~~R~~~~---------~~~l~---~~l~-----~~---v~~~~~Dl~d 98 (429)
|+||||||+||||+++++.|+ ++ |++|++++|+... .+.+. +.+. .+ ++++.+|++|
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 589999999999999999999 86 7999999987543 33332 2221 24 8899999999
Q ss_pred hHHHHHHhc--C-ccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH--------
Q 014177 99 EGSLLMALR--D-VDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-------- 151 (429)
Q Consensus 99 ~~~l~~~~~--~-~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-------- 151 (429)
.+++.++++ + +|+|||||+.... .++.+++++|.+.++. +|.+|+...|....
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 999999887 6 9999999986531 2457789999999875 56666543331100
Q ss_pred HhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 152 KSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 152 ~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
..++|. .+ ......|+.||..++.+++.+.++++.++..+|. .+.+|++.
T Consensus 161 ~~~~E~-----~~--~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp-~~v~G~~~ 210 (397)
T 1gy8_A 161 EPIDIN-----AK--KSPESPYGESKLIAERMIRDCAEAYGIKGICLRY-FNACGAHE 210 (397)
T ss_dssp CCBCTT-----SC--CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CEEECCCT
T ss_pred cCcCcc-----CC--CCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEec-cceeCCCc
Confidence 011111 01 0123459999999999999988777788888998 56788764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.4e-14 Score=139.74 Aligned_cols=155 Identities=16% Similarity=0.190 Sum_probs=109.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC--ccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD--VDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi 113 (429)
.+++|+|+||||+|+||+++++.|+++ |++|++.+|+..........+ .+++++.+|++|.+++.+++++ +|+||
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi 94 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATGRREHLKDH-PNLTFVEGSIADHALVNQLIGDLQPDAVV 94 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSCCC-TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCccchhhHhhc-CCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence 467889999999999999999999997 799999999754321111111 3678999999999999999987 99999
Q ss_pred ecCCCCCC------------CchHHHHHHHHHcCC-cEEEeCCChhHH----HHHHhhHHHHHHcCCcEEecCC-Cccch
Q 014177 114 HAAGPFQQ------------APKCTVLEAAIETKT-AYIDVCDDTIYS----QRAKSFKDRAIAANIPAITTGG-IYPGV 175 (429)
Q Consensus 114 ~~agp~~~------------~~~~~v~~aa~~~gv-~~vdis~~~~~~----~~~~~~~~~a~~~g~~~i~~~g-~~pG~ 175 (429)
|||+.... .++.+++++|.+.++ ++|.+|+...|. .....++|. . ... ..|+.
T Consensus 95 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~----~-----~p~~~~Y~~ 165 (333)
T 2q1w_A 95 HTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHP----R-----NPANSSYAI 165 (333)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSC----C-----CCTTCHHHH
T ss_pred ECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCC----C-----CCCCCchHH
Confidence 99986532 235688999999987 556666544331 100011111 0 122 45999
Q ss_pred hHHHHHHHHHH-HHhhcCCCCeEEEEEeeecCCC
Q 014177 176 SNVMAAELVRV-ARNESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 176 s~~~a~~~~~~-~~~~~~~~v~~i~~~~~~~G~~ 208 (429)
+|..++.+++. +. ++..+|+ .+.+|++
T Consensus 166 sK~~~E~~~~~s~~-----~~~ilR~-~~v~gp~ 193 (333)
T 2q1w_A 166 SKSANEDYLEYSGL-----DFVTFRL-ANVVGPR 193 (333)
T ss_dssp HHHHHHHHHHHHTC-----CEEEEEE-SEEESTT
T ss_pred HHHHHHHHHHhhhC-----CeEEEee-ceEECcC
Confidence 99999998875 42 6778887 4567877
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-13 Score=134.10 Aligned_cols=171 Identities=16% Similarity=0.053 Sum_probs=117.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEE-EeeCCChHHHHHHhcCccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFA-EVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~-~~Dl~d~~~l~~~~~~~Dv 111 (429)
+++|+||||||+||||+++++.|+++ |++|++.+|+.++.+.+.+.+ +.+++++ .+|++|.+++.++++++|+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 56789999999999999999999997 899999999988766555432 2467888 7999999999999999999
Q ss_pred EEecCCCCCC------------CchHHHHHHHHH-cCC-cEEEeCCChhHHHHH-----HhhHHH---------HHHcCC
Q 014177 112 VVHAAGPFQQ------------APKCTVLEAAIE-TKT-AYIDVCDDTIYSQRA-----KSFKDR---------AIAANI 163 (429)
Q Consensus 112 Vi~~agp~~~------------~~~~~v~~aa~~-~gv-~~vdis~~~~~~~~~-----~~~~~~---------a~~~g~ 163 (429)
|||||++... .++.+++++|.+ .++ +.|.+|+...++... ..++|. ......
T Consensus 87 vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 166 (342)
T 1y1p_A 87 VAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE 166 (342)
T ss_dssp EEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccc
Confidence 9999986532 245788999984 565 456666554442100 001000 000000
Q ss_pred cEEecCCCccchhHHHHHHHHHHHHhhc--CCCCeEEEEEeeecCCCCC
Q 014177 164 PAITTGGIYPGVSNVMAAELVRVARNES--KGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 164 ~~i~~~g~~pG~s~~~a~~~~~~~~~~~--~~~v~~i~~~~~~~G~~~~ 210 (429)
..-......||.||..++.+++.+.+++ +..+..+|. .+.+|+...
T Consensus 167 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp-~~v~g~~~~ 214 (342)
T 1y1p_A 167 SDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLP-NYTIGTIFD 214 (342)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEE-SEEECCCSC
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcC-CceECCCCC
Confidence 0000011349999999999999887665 334567777 456887643
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-14 Score=131.08 Aligned_cols=157 Identities=14% Similarity=0.083 Sum_probs=110.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+||||+|++|+++++.|+++ |++|++.+|+.++++.+. ..+++++++|++|.++ +.++++|+||||||..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~---~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRL---GATVATLVKEPLVLTE--ADLDSVDAVVDALSVP 73 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHT---CTTSEEEECCGGGCCH--HHHTTCSEEEECCCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEeccccccccc---CCCceEEecccccccH--hhcccCCEEEECCccC
Confidence 57999999999999999999997 899999999988776543 2578999999999887 7788999999999874
Q ss_pred CC--------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhc
Q 014177 120 QQ--------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNES 191 (429)
Q Consensus 120 ~~--------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~ 191 (429)
.. .++.+++++|.+.|.++|.+++...++......... .. ....+.....|+.+|..++.+ ..+.++.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~-~~--~~~~~~~~~~y~~sK~~~e~~-~~~~~~~ 149 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMI-LD--FPESAASQPWYDGALYQYYEY-QFLQMNA 149 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGG-GG--CCGGGGGSTTHHHHHHHHHHH-HHHTTCT
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCcccc-cc--CCCCCccchhhHHHHHHHHHH-HHHHhcC
Confidence 21 245788999999896677777654332111000000 00 011112235699999988854 4444456
Q ss_pred CCCCeEEEEEeeecCCC
Q 014177 192 KGEPERLRFSYYTAGTG 208 (429)
Q Consensus 192 ~~~v~~i~~~~~~~G~~ 208 (429)
+.++..+|.. ..+|++
T Consensus 150 ~i~~~ivrp~-~v~g~~ 165 (224)
T 3h2s_A 150 NVNWIGISPS-EAFPSG 165 (224)
T ss_dssp TSCEEEEEEC-SBCCCC
T ss_pred CCcEEEEcCc-cccCCC
Confidence 7778888874 456653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=132.44 Aligned_cols=158 Identities=18% Similarity=0.135 Sum_probs=113.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+||||||+||||+++++.|+++ |++|++.+|+..... ..+..+++++++|++|.+++.++++ ++|+|||+|+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATGKR---ENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA 75 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSCCG---GGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcCch---hhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence 47999999999999999999987 899999998543211 1122357889999999999999888 8999999998
Q ss_pred CCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHH-H--HhhHHHHHHcCCcEEecCCCccchhHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQR-A--KSFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~-~--~~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
.... .++.+++++|.+.++. .|.+|+....+.. . ...++. .+ ......|+.||.
T Consensus 76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~-----~~--~~~~~~Y~~sK~ 148 (311)
T 2p5y_A 76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEET-----WP--PRPKSPYAASKA 148 (311)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTT-----SC--CCCCSHHHHHHH
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCC-----CC--CCCCChHHHHHH
Confidence 6431 2356889999998875 4555543122211 0 011111 01 011245999999
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 179 MAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.++.+++.+.++++.++..+|. .+.+|++..
T Consensus 149 ~~e~~~~~~~~~~~~~~~~lrp-~~v~Gp~~~ 179 (311)
T 2p5y_A 149 AFEHYLSVYGQSYGLKWVSLRY-GNVYGPRQD 179 (311)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEE-CEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEee-ccccCcCCC
Confidence 9999999887777888899998 567888754
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-14 Score=144.05 Aligned_cols=162 Identities=13% Similarity=0.014 Sum_probs=113.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHh---CC-CcEEEEeeCCChHHHHHHhcC-
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTL---GK-NSEFAEVNIYNEGSLLMALRD- 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l---~~-~v~~~~~Dl~d~~~l~~~~~~- 108 (429)
+++||||||+||||+++++.|+++ |++|++.+|+.++ ++.+.... +. +++++.+|++|.+++.+++++
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 105 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 105 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc
Confidence 479999999999999999999997 7999999998654 22221111 12 678899999999999998885
Q ss_pred -ccEEEecCCCCCC---------------CchHHHHHHHHHcCC------cEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 109 -VDLVVHAAGPFQQ---------------APKCTVLEAAIETKT------AYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 109 -~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv------~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
+|+|||||+.... .++.+++++|.+.++ ++|.+|+...|......+++. .+.
T Consensus 106 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~-----~~~- 179 (381)
T 1n7h_A 106 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET-----TPF- 179 (381)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT-----SCC-
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCC-----CCC-
Confidence 6999999986531 135678899988765 567777655442110011111 011
Q ss_pred ecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 167 TTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 167 ~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.....|+.+|..++.+++.+.++++..+..+++ ++.+|++..
T Consensus 180 -~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~-~~~~gp~~~ 221 (381)
T 1n7h_A 180 -HPRSPYAASKCAAHWYTVNYREAYGLFACNGIL-FNHESPRRG 221 (381)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEECTTSC
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEe-CceeCCCCC
Confidence 112459999999999999887766666666776 667787643
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.3e-14 Score=138.48 Aligned_cols=160 Identities=18% Similarity=0.230 Sum_probs=113.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----Ccc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVD 110 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~D 110 (429)
+++|+|+||||+||||+++++.|+++ | ++|++.+|+..... . ..+. ++. +.+|++|.+.++++++ ++|
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~-~-~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~~d 117 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTK-F-VNLV-DLN-IADYMDKEDFLIQIMAGEEFGDVE 117 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT--TCCCEEEEECCSSGGG-G-GGTT-TSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCcEEEEEecCCCcch-h-hccc-Cce-EeeecCcHHHHHHHHhhcccCCCC
Confidence 55689999999999999999999997 7 89999998765421 1 1121 233 6789999999998887 599
Q ss_pred EEEecCCCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchh
Q 014177 111 LVVHAAGPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 111 vVi~~agp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
+|||||+.... .++.+++++|.+.++++|.+|+...|..... .++|.. +. .....|+.+
T Consensus 118 ~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~~-----~~--~p~~~Y~~s 190 (357)
T 2x6t_A 118 AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESRE-----YE--KPLNVFGYS 190 (357)
T ss_dssp EEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSGG-----GC--CCSSHHHHH
T ss_pred EEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCcC-----CC--CCCChhHHH
Confidence 99999986532 1357899999998887787776554421100 111111 00 112459999
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 177 NVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
|..++.+++.+.++++.++..+|. .+.+|++..
T Consensus 191 K~~~E~~~~~~~~~~g~~~~ilRp-~~v~Gp~~~ 223 (357)
T 2x6t_A 191 KFLFDEYVRQILPEANSQIVGFRY-FNVYGPREG 223 (357)
T ss_dssp HHHHHHHHHHHGGGCSSCEEEEEE-CEEESSSCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEec-CeEECCCCC
Confidence 999999999988777788889998 457888754
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.4e-14 Score=138.62 Aligned_cols=163 Identities=13% Similarity=0.109 Sum_probs=115.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH--HHHHHhC--CCcEEEEeeCCChHHHHHHhcC--cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA--AMVSTLG--KNSEFAEVNIYNEGSLLMALRD--VD 110 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~--~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~--~D 110 (429)
|++|+|+||||+||||+++++.|+++ |++|++.+|+.++.+ .+. .+. .+++++++|++|.+++.+++++ +|
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 77 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKVQPD 77 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHHCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhcCCC
Confidence 34689999999999999999999997 899999999876532 222 221 3588899999999999998885 69
Q ss_pred EEEecCCCCCC---------------CchHHHHHHHHHcCC--cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCc
Q 014177 111 LVVHAAGPFQQ---------------APKCTVLEAAIETKT--AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIY 172 (429)
Q Consensus 111 vVi~~agp~~~---------------~~~~~v~~aa~~~gv--~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~ 172 (429)
+|||||+.... .++.+++++|.+.++ +.|.+|+...|.... ..+++. .+. .....
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~--~~~~~ 150 (345)
T 2z1m_A 78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEK-----TPF--YPRSP 150 (345)
T ss_dssp EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTT-----SCC--CCCSH
T ss_pred EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCcc-----CCC--CCCCh
Confidence 99999986431 235788999998885 567776554432110 011111 110 11245
Q ss_pred cchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 173 PGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
|+.||..++.+++.+.++++.....++. ++.+||+..
T Consensus 151 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~-~~~~gpg~~ 187 (345)
T 2z1m_A 151 YAVAKLFGHWITVNYREAYNMFACSGIL-FNHESPLRG 187 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEE-CCEECTTSC
T ss_pred hHHHHHHHHHHHHHHHHHhCCceEeeee-eeecCCCCC
Confidence 9999999999999887776666666676 667888653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-14 Score=137.71 Aligned_cols=162 Identities=13% Similarity=0.057 Sum_probs=115.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH--HHHHHHh--CCCcEEEEeeCCChHHHHHHhcC--ccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG--AAMVSTL--GKNSEFAEVNIYNEGSLLMALRD--VDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~--~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~~--~Dv 111 (429)
.+++||||||+||||+++++.|+++ |++|++.+|+..+. ..+. .+ ..+++++.+|++|.+++.+++++ +|+
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 4588999999999999999999997 79999999986542 1221 12 13578899999999999999884 699
Q ss_pred EEecCCCCCC---------------CchHHHHHHHHHcCC--cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCcc
Q 014177 112 VVHAAGPFQQ---------------APKCTVLEAAIETKT--AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 112 Vi~~agp~~~---------------~~~~~v~~aa~~~gv--~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~p 173 (429)
|||||+.... .++.+++++|.+.++ ++|.+|+...|.... ..++|. .+. .....|
T Consensus 90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~--~p~~~Y 162 (335)
T 1rpn_A 90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPF--YPRSPY 162 (335)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCC--CCCSHH
T ss_pred EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcc-----cCC--CCCChh
Confidence 9999986431 135678999999875 566676654432111 011111 111 112459
Q ss_pred chhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 174 GVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+.+|..++.+++.+.++++.++..+|+ ++.+|++..
T Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~i~r~-~~v~Gp~~~ 198 (335)
T 1rpn_A 163 GVAKLYGHWITVNYRESFGLHASSGIL-FNHESPLRG 198 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEE-CCEECTTSC
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEee-CcccCCCCC
Confidence 999999999999887777788888888 567888643
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=133.97 Aligned_cols=151 Identities=14% Similarity=0.144 Sum_probs=109.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
|++|+|+||||+||+|+++++.|+++ +++|++.+|+. .+|++|.+++.++++ ++|+|||
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~-----------------~~D~~d~~~~~~~~~~~~~d~vih 61 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD-----------------ELNLLDSRAVHDFFASERIDQVYL 61 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT-----------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCc-----------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence 34579999999999999999999987 78998887752 269999999999998 9999999
Q ss_pred cCCCCCC----------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecC-CCccch
Q 014177 115 AAGPFQQ----------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTG-GIYPGV 175 (429)
Q Consensus 115 ~agp~~~----------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~-g~~pG~ 175 (429)
||+.... .++.+++++|.+.++ ++|.+|+...|.... ..++|.....+ + ... ...|+.
T Consensus 62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~-~--~~p~~~~Y~~ 138 (321)
T 1e6u_A 62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQG-T--LEPTNEPYAI 138 (321)
T ss_dssp CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSS-C--CCGGGHHHHH
T ss_pred cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccC-C--CCCCCCccHH
Confidence 9986531 235688999999998 556777655442110 01111100000 1 011 135899
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 176 SNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
+|..++.+++.+.++++.++..+|. ...+|++..
T Consensus 139 sK~~~E~~~~~~~~~~~~~~~ilrp-~~v~G~~~~ 172 (321)
T 1e6u_A 139 AKIAGIKLCESYNRQYGRDYRSVMP-TNLYGPHDN 172 (321)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEE-CEEESTTCC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEe-CCcCCcCCC
Confidence 9999999999887777888889998 467888754
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.8e-14 Score=139.46 Aligned_cols=164 Identities=20% Similarity=0.175 Sum_probs=118.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhcC--ccEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALRD--VDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~~--~DvV 112 (429)
|++|+||||||+||||+++++.|+++ |++|++.+|+.++...+.+.+ ..++.++++|++|.+++.+++++ +|+|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIV 84 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence 56789999999999999999999997 799999999876654443332 24688999999999999999885 8999
Q ss_pred EecCCCCCC---------------CchHHHHHHHHHcC-C-cEEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCcc
Q 014177 113 VHAAGPFQQ---------------APKCTVLEAAIETK-T-AYIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 113 i~~agp~~~---------------~~~~~v~~aa~~~g-v-~~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~p 173 (429)
||||+.... .++.+++++|.+.+ + ++|.+|+...|.... ..+.+. .+ ......|
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~-----~~--~~~~~~Y 157 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EA--MGGYDPY 157 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SC--BCCSSHH
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCC-----CC--CCCCCcc
Confidence 999984311 23567899998876 5 456666654432110 011110 01 1123459
Q ss_pred chhHHHHHHHHHHHHhhc---------CCCCeEEEEEeeecCCCCC
Q 014177 174 GVSNVMAAELVRVARNES---------KGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~---------~~~v~~i~~~~~~~G~~~~ 210 (429)
+.+|..++.+++.+.+++ +.++..+|. ...+|++..
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp-~~v~G~~~~ 202 (357)
T 1rkx_A 158 SNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRA-GNVIGGGDW 202 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEEC-CCEECTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEee-ceeeCCCCC
Confidence 999999999998887654 667788887 457888754
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.8e-14 Score=135.79 Aligned_cols=157 Identities=13% Similarity=0.150 Sum_probs=113.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
+|+|+||||+||||+++++.|+++.++++|++.+|+..+.+ +. .+++++.+|++|.+++.++++ ++|+|||||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a 76 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----NSGPFEVVNALDFNQIEHLVEVHKITDIYLMA 76 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----HSSCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----CCCceEEecCCCHHHHHHHHhhcCCCEEEECC
Confidence 47899999999999999999998623689999999876532 21 247889999999999999998 899999999
Q ss_pred CCCCC--------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 117 GPFQQ--------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 117 gp~~~--------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
+.... .++.+++++|.+.+++ +|.+|+...|.... ....+. .+ ......|+.+|..
T Consensus 77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~--~~~~~~Y~~sK~~ 149 (312)
T 2yy7_A 77 ALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQY-----TI--MEPSTVYGISKQA 149 (312)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSS-----CB--CCCCSHHHHHHHH
T ss_pred ccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCcccc-----Cc--CCCCchhHHHHHH
Confidence 86421 2356889999999984 45555444332110 001110 11 1123459999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCC
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~ 208 (429)
++.+++.+.++++.++..+|. ...+|+.
T Consensus 150 ~e~~~~~~~~~~~~~~~~lrp-~~v~g~~ 177 (312)
T 2yy7_A 150 GERWCEYYHNIYGVDVRSIRY-PGLISWS 177 (312)
T ss_dssp HHHHHHHHHHHHCCEEECEEE-CEEECSS
T ss_pred HHHHHHHHHHhcCCcEEEEeC-CeEecCC
Confidence 999999887777778888887 4567864
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2e-13 Score=133.93 Aligned_cols=146 Identities=17% Similarity=0.110 Sum_probs=107.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--Ccc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~D 110 (429)
|.+++|+|+||+|++|+++++.|+++ +++|++.+|+. ++.+.+......+++++++|++|.+++.++++ ++|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d 85 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEID 85 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence 55689999999999999999999997 78999999976 44443332222578999999999999999999 999
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcC-CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETK-TAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~g-v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
+|||+++.....++.+++++|.+.| ++.+..+.... ..++ . .+. .....|+.+|..++.+++.
T Consensus 86 ~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~------~~~e----~-~~~--~p~~~y~~sK~~~e~~l~~--- 149 (346)
T 3i6i_A 86 IVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGH------DVNR----A-DPV--EPGLNMYREKRRVRQLVEE--- 149 (346)
T ss_dssp EEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSS------CTTT----C-CCC--TTHHHHHHHHHHHHHHHHH---
T ss_pred EEEECCchhhHHHHHHHHHHHHHcCCceEEeecccCC------CCCc----c-CcC--CCcchHHHHHHHHHHHHHH---
Confidence 9999999765567789999999999 88876542211 0000 0 000 1123478888888877763
Q ss_pred hcCCCCeEEEEE
Q 014177 190 ESKGEPERLRFS 201 (429)
Q Consensus 190 ~~~~~v~~i~~~ 201 (429)
.+.+...+|..
T Consensus 150 -~g~~~tivrpg 160 (346)
T 3i6i_A 150 -SGIPFTYICCN 160 (346)
T ss_dssp -TTCCBEEEECC
T ss_pred -cCCCEEEEEec
Confidence 56778888863
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.45 E-value=6.1e-13 Score=126.58 Aligned_cols=135 Identities=21% Similarity=0.200 Sum_probs=105.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+||||+|++|+++++.|+++.++++|++.+|+.++.+.+.. .+++++.+|++|.+++.++++++|+|||++++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 77 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH 77 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 57999999999999999999985347899999999887765543 468899999999999999999999999999864
Q ss_pred CC-----CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 120 QQ-----APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 120 ~~-----~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.. .++.+++++|.+.+++ +|.+|+...+ . ....|+.+|..++.+++ +.+.
T Consensus 78 ~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~------------~--------~~~~y~~~K~~~E~~~~----~~~~ 133 (287)
T 2jl1_A 78 YDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAE------------E--------SIIPLAHVHLATEYAIR----TTNI 133 (287)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGG------------G--------CCSTHHHHHHHHHHHHH----HTTC
T ss_pred cCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCC------------C--------CCCchHHHHHHHHHHHH----HcCC
Confidence 21 2457889999999985 4566544322 0 11358899998888876 3566
Q ss_pred CCeEEEEE
Q 014177 194 EPERLRFS 201 (429)
Q Consensus 194 ~v~~i~~~ 201 (429)
++..+|..
T Consensus 134 ~~~ilrp~ 141 (287)
T 2jl1_A 134 PYTFLRNA 141 (287)
T ss_dssp CEEEEEEC
T ss_pred CeEEEECC
Confidence 77777763
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=7.9e-14 Score=137.76 Aligned_cols=162 Identities=14% Similarity=0.038 Sum_probs=111.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHh---CCCcEEEEeeCCChHHHHHHhcC--
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTL---GKNSEFAEVNIYNEGSLLMALRD-- 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~~-- 108 (429)
||+|+||||+||||+++++.|+++ |++|++.+|+.++ ++.+.+.. ..+++++++|++|.+++.+++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ 78 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence 578999999999999999999997 7899999998653 22221111 24678899999999999998885
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcCC----cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEec
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETKT----AYIDVCDDTIYSQRA-KSFKDRAIAANIPAITT 168 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv----~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~ 168 (429)
+|+|||||+.... .++.+++++|.+.++ ++|.+|+...|.... ..+++. .+. .
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~-----~~~--~ 151 (372)
T 1db3_A 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPF--Y 151 (372)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCC--C
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCcc-----CCC--C
Confidence 7999999986431 145678999999886 567777654442110 011111 011 1
Q ss_pred CCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
....|+.||..++.+++.+.++++..+..+++ ++.+|++..
T Consensus 152 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~-~~~~gp~~~ 192 (372)
T 1db3_A 152 PRSPYAVAKLYAYWITVNYRESYGMYACNGIL-FNHESPRRG 192 (372)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-CCEECTTSC
T ss_pred CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEE-CCccCCCCC
Confidence 12459999999999999888777777777887 667787643
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.8e-14 Score=134.43 Aligned_cols=180 Identities=14% Similarity=0.108 Sum_probs=119.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC--ccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD--VDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi 113 (429)
+|++|+||||||+||+|+++++.|+++ ++ +..... ..++.+++|++|.+++.+++++ +|+||
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~--g~------~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi 66 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADG--AG------LPGEDW--------VFVSSKDADLTDTAQTRALFEKVQPTHVI 66 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTT--TC------CTTCEE--------EECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhc--CC------cccccc--------cccCceecccCCHHHHHHHHhhcCCCEEE
Confidence 377899999999999999999999997 54 111100 1234457899999999999986 99999
Q ss_pred ecCCCCCC----------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccch
Q 014177 114 HAAGPFQQ----------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 114 ~~agp~~~----------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
|||+.... .++.+++++|.+.+++ +|.+|+...|.... ..++|.....+ +.. .....|+.
T Consensus 67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~-~~~-p~~~~Y~~ 144 (319)
T 4b8w_A 67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG-PPH-NSNFGYSY 144 (319)
T ss_dssp ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS-CCC-SSSHHHHH
T ss_pred ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC-CCC-CCcchHHH
Confidence 99987431 1456789999999986 45666654432110 02222110000 100 01124999
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC----ccHHHHHH------HHhCCceEEeeCCeE
Q 014177 176 SNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG----PTILATSF------LLLGEEVVAYNKGEE 234 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g----~~~~~~~~------~~~~~~~~v~~~G~~ 234 (429)
+|+.++.+++.+.++++.++..+|. .+.+|++... ...+...+ ...+.++.++.+|..
T Consensus 145 sK~~~E~~~~~~~~~~~~~~~ilRp-~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 212 (319)
T 4b8w_A 145 AKRMIDVQNRAYFQQYGCTFTAVIP-TNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNP 212 (319)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEE-CEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCC
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEee-ccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCe
Confidence 9999999999988778888899998 5678887542 12333222 234667777777654
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=8e-13 Score=122.93 Aligned_cols=151 Identities=16% Similarity=0.079 Sum_probs=107.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+++|+|+|+||+|++|+++++.|++++.+++|++.+|++++.+.+ ..++.++.+|++|.+++.++++++|+|||||
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 77 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----GGEADVFIGDITDADSINPAFQGIDALVILT 77 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----TCCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc----CCCeeEEEecCCCHHHHHHHHcCCCEEEEec
Confidence 457899999999999999999999974468999999998766543 3568899999999999999999999999999
Q ss_pred CCCCC----------------------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 117 GPFQQ----------------------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 117 gp~~~----------------------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
|.... .++.+++++|.+.++. +|.+++...+.. ..+..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~------------~~~~~~ 145 (253)
T 1xq6_A 78 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP------------DHPLNK 145 (253)
T ss_dssp CCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT------------TCGGGG
T ss_pred cccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC------------CCcccc
Confidence 85321 1356888899888875 455554432100 000000
Q ss_pred cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCC
Q 014177 168 TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 168 ~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~ 208 (429)
-....|+.+|..++.+++ +.+.++..+|.. ..+|+.
T Consensus 146 ~~~~~y~~sK~~~e~~~~----~~~i~~~~vrpg-~v~~~~ 181 (253)
T 1xq6_A 146 LGNGNILVWKRKAEQYLA----DSGTPYTIIRAG-GLLDKE 181 (253)
T ss_dssp GGGCCHHHHHHHHHHHHH----TSSSCEEEEEEC-EEECSC
T ss_pred ccchhHHHHHHHHHHHHH----hCCCceEEEecc-eeecCC
Confidence 000235568888877765 467778888874 345554
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=9.6e-13 Score=128.74 Aligned_cols=188 Identities=17% Similarity=0.180 Sum_probs=121.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.+++|+||||||+||+|+++++.|+++ |++|++.+|+..........+ ..+++++.+|+.|. .+.++|+||
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vi 96 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIY 96 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEE
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEE
Confidence 356789999999999999999999997 799999998654211111111 14588999999875 357899999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhH
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
|||+.... .++.+++++|.+.++++|.+|+...|.... ..++|..-....+ ......|+.+|
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~--~~~~~~Y~~sK 174 (343)
T 2b69_A 97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNP--IGPRACYDEGK 174 (343)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCS--SSTTHHHHHHH
T ss_pred ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCC--CCCCCchHHHH
Confidence 99986431 135678999999998888877654442110 0111100000001 01123499999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC--ccHHHHHHH--HhCCceEEeeCCe
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGAG--PTILATSFL--LLGEEVVAYNKGE 233 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g--~~~~~~~~~--~~~~~~~v~~~G~ 233 (429)
..++.++..+.++++.++..+|. .+.+|++... ...+...+. ..+.++.++.+|.
T Consensus 175 ~~~E~~~~~~~~~~~~~~~ilrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T 2b69_A 175 RVAETMCYAYMKQEGVEVRVARI-FNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS 233 (343)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEE-CCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC
T ss_pred HHHHHHHHHHHHHhCCcEEEEEE-cceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCC
Confidence 99999998887777888889998 5678886532 223332222 2355666666654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.43 E-value=4.9e-13 Score=142.59 Aligned_cols=166 Identities=14% Similarity=0.152 Sum_probs=119.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH-HHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS-LLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~-l~~~~~~~DvVi~~ 115 (429)
+++|+|+||||+||||+++++.|+++ .+++|++.+|+..+.+.+.. ..+++++.+|++|.++ +.++++++|+||||
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~-~g~~V~~~~r~~~~~~~~~~--~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~ 389 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL 389 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHS-SSEEEEEEESCCTTTGGGTT--CTTEEEEECCTTTCHHHHHHHHHHCSEEEEC
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhc-CCCEEEEEEcCchhhhhhcc--CCceEEEECCCCCcHHHHHHhhcCCCEEEEC
Confidence 56789999999999999999999985 36899999998776543221 2468899999999765 77788899999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEe----cCCCccch
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAIT----TGGIYPGV 175 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~----~~g~~pG~ 175 (429)
|+.... .++.+++++|.+.+.++|.+|+...|.... ..+++. ...... .....||.
T Consensus 390 Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~----~~~~~~~p~~~p~~~Y~~ 465 (660)
T 1z7e_A 390 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDED----HSNLIVGPVNKPRWIYSV 465 (660)
T ss_dssp CCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTT----TCCEEECCTTCTTHHHHH
T ss_pred ceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCC----ccccccCcccCCCCCcHH
Confidence 986431 245788999999886667777655442110 011111 001111 11235999
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 176 SNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
||..++.+++.+.++++.++..+|. .+.+|++..
T Consensus 466 sK~~~E~~~~~~~~~~gi~~~ilRp-g~v~Gp~~~ 499 (660)
T 1z7e_A 466 SKQLLDRVIWAYGEKEGLQFTLFRP-FNWMGPRLD 499 (660)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEE-CSEESTTSS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECC-CcccCCCcc
Confidence 9999999999887777888899998 467888753
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=6.8e-14 Score=138.64 Aligned_cols=161 Identities=12% Similarity=0.068 Sum_probs=113.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHH----hCCCcEEEEeeCCChHHHHHHhcC-
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVST----LGKNSEFAEVNIYNEGSLLMALRD- 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~~- 108 (429)
+|+||||||+||||+++++.|+++ |++|++.+|+... ++.+... ...+++++++|++|.+++.+++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 101 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence 378999999999999999999997 7999999997643 2222110 123678899999999999998885
Q ss_pred -ccEEEecCCCCCC---------------CchHHHHHHHHHcCC----cEEEeCCChhHHHHH-HhhHHHHHHcCCcEEe
Q 014177 109 -VDLVVHAAGPFQQ---------------APKCTVLEAAIETKT----AYIDVCDDTIYSQRA-KSFKDRAIAANIPAIT 167 (429)
Q Consensus 109 -~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv----~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~ 167 (429)
+|+|||||+.... .++.+++++|.+.++ ++|.+|+...|.... ..++|. .+.
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~-- 174 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPF-- 174 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCC--
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc-----CCC--
Confidence 6999999986431 135678999999886 566676554432110 011111 011
Q ss_pred cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 168 TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 168 ~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.....|+.+|..++.+++.+.++++.++..+|+ +..+|++.
T Consensus 175 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~-~~~~gp~~ 215 (375)
T 1t2a_A 175 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGIL-FNHESPRR 215 (375)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEECTTS
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEec-ccccCCCC
Confidence 112459999999999999888777777777887 56778764
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.5e-13 Score=132.50 Aligned_cols=160 Identities=23% Similarity=0.302 Sum_probs=110.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|+||||||+||||+++++.|+++ |++|++.+|.. +.++.+....+.++.++.+|++|.+++.++++ ++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 47999999999999999999997 89999988642 22333322223467899999999999988887 599999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchh
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
||||.... .++.+++++|.+.++. .|.+|+...|.... ..+++. .+.-+ ....|+.|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~-~~~~Y~~s 152 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVES-----FPTGT-PQSPYGKS 152 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTT-----SCCCC-CSSHHHHH
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcc-----cCCCC-CCChHHHH
Confidence 99986421 2356788888888874 56666544331100 011111 01000 12459999
Q ss_pred HHHHHHHHHHHHhhc-CCCCeEEEEEeeecCCC
Q 014177 177 NVMAAELVRVARNES-KGEPERLRFSYYTAGTG 208 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~-~~~v~~i~~~~~~~G~~ 208 (429)
|..++.+++.+.++. +.++..+|+ ++++|+.
T Consensus 153 K~~~e~~~~~~~~~~~~~~~~ilR~-~~v~G~~ 184 (338)
T 1udb_A 153 KLMVEQILTDLQKAQPDWSIALLRY-FNPVGAH 184 (338)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEE-CEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEEee-ceecCCC
Confidence 999999999887665 567778887 6778874
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.42 E-value=6.4e-14 Score=136.90 Aligned_cols=159 Identities=12% Similarity=0.094 Sum_probs=112.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-------ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-C
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-------LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-D 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-------~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~ 108 (429)
+++|+||||||+||||+++++.|+++ | ++|++.+|+..+... ....++.++++|++|.+++.++++ +
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~--g~~~~r~~~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~ 86 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKD--GSLGGKPVEKFTLIDVFQPEAPA---GFSGAVDARAADLSAPGEAEKLVEAR 86 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHH--CEETTEEEEEEEEEESSCCCCCT---TCCSEEEEEECCTTSTTHHHHHHHTC
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhc--CCcccCCCceEEEEEccCCcccc---ccCCceeEEEcCCCCHHHHHHHHhcC
Confidence 56789999999999999999999998 7 799999998654321 112457889999999999999884 8
Q ss_pred ccEEEecCCCCCC--------------CchHHHHHHHHHcC-----C-cEEEeCCChhHHHH-HHhhHHHHHHcCCcEEe
Q 014177 109 VDLVVHAAGPFQQ--------------APKCTVLEAAIETK-----T-AYIDVCDDTIYSQR-AKSFKDRAIAANIPAIT 167 (429)
Q Consensus 109 ~DvVi~~agp~~~--------------~~~~~v~~aa~~~g-----v-~~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~ 167 (429)
+|+|||||+.... .++.+++++|.+.+ + +.|.+|+...|... ...++|. .+ .
T Consensus 87 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~--~ 159 (342)
T 2hrz_A 87 PDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE-----FH--T 159 (342)
T ss_dssp CSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT-----CC--C
T ss_pred CCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC-----CC--C
Confidence 9999999986431 24567889998876 4 45666654433211 0111111 11 1
Q ss_pred cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecC-CC
Q 014177 168 TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAG-TG 208 (429)
Q Consensus 168 ~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G-~~ 208 (429)
.....|+.+|..++.++..+.++.+.....+|+ .+.+| |+
T Consensus 160 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~-~~v~g~pg 200 (342)
T 2hrz_A 160 TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRL-PTICIRPG 200 (342)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEE-CEETTCCS
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEe-eeEEecCC
Confidence 123459999999999999887666666677887 45566 54
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.5e-13 Score=122.42 Aligned_cols=140 Identities=11% Similarity=0.098 Sum_probs=101.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+|+|+|+||+|++|+++++.|+++ +++|++.+|++++.+.+ ...+++++++|++|.+++.++++++|+|||++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccc---cCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 479999999999999999999997 79999999998764321 1246899999999999999999999999999986
Q ss_pred CCC--------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 119 FQQ--------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 119 ~~~--------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
... .+..+++++|.+.+++ +|.+++...+... .+.+. ....|+.+|..++.+++
T Consensus 78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~----------~~~~~---~~~~y~~~K~~~e~~~~---- 140 (206)
T 1hdo_A 78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDP----------TKVPP---RLQAVTDDHIRMHKVLR---- 140 (206)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCT----------TCSCG---GGHHHHHHHHHHHHHHH----
T ss_pred CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCc----------ccccc---cchhHHHHHHHHHHHHH----
Confidence 542 1357889999988875 4556654332110 00000 11337788888877775
Q ss_pred hcCCCCeEEEE
Q 014177 190 ESKGEPERLRF 200 (429)
Q Consensus 190 ~~~~~v~~i~~ 200 (429)
+.+.++..+|.
T Consensus 141 ~~~i~~~~lrp 151 (206)
T 1hdo_A 141 ESGLKYVAVMP 151 (206)
T ss_dssp HTCSEEEEECC
T ss_pred hCCCCEEEEeC
Confidence 34555556665
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.5e-13 Score=127.96 Aligned_cols=166 Identities=18% Similarity=0.201 Sum_probs=110.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-Cchh---HHHHHHHhC---CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREK---GAAMVSTLG---KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~---~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
+|+||||||+||||+++++.|+++ |++|++.+| +++. ...+. .+. .+++++++|++|.+++.++++++|+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 77 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIEGCVG 77 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHTTCSE
T ss_pred CCEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHcCCCE
Confidence 478999999999999999999997 899999888 6532 22221 121 2467888999999999999999999
Q ss_pred EEecCCCCCC--------------CchHHHHHHHHHc-CCc-EEEeCCChhHHHHH---HhhHHHHHHcC----CcEEec
Q 014177 112 VVHAAGPFQQ--------------APKCTVLEAAIET-KTA-YIDVCDDTIYSQRA---KSFKDRAIAAN----IPAITT 168 (429)
Q Consensus 112 Vi~~agp~~~--------------~~~~~v~~aa~~~-gv~-~vdis~~~~~~~~~---~~~~~~a~~~g----~~~i~~ 168 (429)
|||+|++... .++.+++++|.+. ++. +|.+|+...++... ..+++.. ... .+..+
T Consensus 78 vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~-~~~~~~~~~~~p- 155 (322)
T 2p4h_X 78 IFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESD-WSDVDLLRSVKP- 155 (322)
T ss_dssp EEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTC-CCCHHHHHHHCC-
T ss_pred EEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCcc-ccchhhhcccCc-
Confidence 9999975311 1356788889887 664 45666543221100 0011000 000 00000
Q ss_pred CCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.++.|+.||.+++.++..+.++++.++..+|. .+++|+...
T Consensus 156 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp-~~v~g~~~~ 196 (322)
T 2p4h_X 156 FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLIL-PFIVGRFVC 196 (322)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE-CEEESCCCS
T ss_pred ccccHHHHHHHHHHHHHHHHHhcCCcEEEEcC-CceECCCCC
Confidence 11259999999999998887667888899998 567888653
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.41 E-value=9.4e-13 Score=122.11 Aligned_cols=106 Identities=20% Similarity=0.192 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++||+|+||||+|+||+++++.|+++ | ++|++.+|+.++++.+. ..+++++++|++|.+++.++++++|+||||
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~ 95 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPY---PTNSQIIMGDVLNHAALKQAMQGQDIVYAN 95 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSC---CTTEEEEECCTTCHHHHHHHHTTCSEEEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccc---cCCcEEEEecCCCHHHHHHHhcCCCEEEEc
Confidence 56789999999999999999999997 6 89999999987754322 246889999999999999999999999999
Q ss_pred CCCCCC-CchHHHHHHHHHcCCc-EEEeCCChhH
Q 014177 116 AGPFQQ-APKCTVLEAAIETKTA-YIDVCDDTIY 147 (429)
Q Consensus 116 agp~~~-~~~~~v~~aa~~~gv~-~vdis~~~~~ 147 (429)
++.... ....+++++|.+.++. +|.+++...+
T Consensus 96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~ 129 (236)
T 3qvo_A 96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIY 129 (236)
T ss_dssp CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC-
T ss_pred CCCCchhHHHHHHHHHHHHcCCCEEEEEecceec
Confidence 986432 2345788999999875 5667665544
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.40 E-value=3.8e-13 Score=124.79 Aligned_cols=143 Identities=13% Similarity=0.027 Sum_probs=104.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc--eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL--QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~--~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|++|+|+||||+|+||+++++.|+++ |+ +|++.+|++++++.... .++.++.+|++|.+++.++++++|+|||
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 90 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAY---KNVNQEVVDFEKLDDYASAFQGHDVGFC 90 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGG---GGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCCcccccc---CCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence 56789999999999999999999998 78 99999998875433211 2578899999999999999999999999
Q ss_pred cCCCCCC------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 115 AAGPFQQ------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 115 ~agp~~~------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
|||.... .+..+++++|.+.++. +|.+++...+. .....|+.+|..++
T Consensus 91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-------------------~~~~~Y~~sK~~~e 151 (242)
T 2bka_A 91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-------------------SSNFLYLQVKGEVE 151 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------------TCSSHHHHHHHHHH
T ss_pred CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC-------------------CCcchHHHHHHHHH
Confidence 9986421 2345677777777763 45555443321 01234888998888
Q ss_pred HHHHHHHhhcCC-CCeEEEEEeeecCCC
Q 014177 182 ELVRVARNESKG-EPERLRFSYYTAGTG 208 (429)
Q Consensus 182 ~~~~~~~~~~~~-~v~~i~~~~~~~G~~ 208 (429)
.+++. ... ++..++.. ..+|+.
T Consensus 152 ~~~~~----~~~~~~~~vrpg-~v~~~~ 174 (242)
T 2bka_A 152 AKVEE----LKFDRYSVFRPG-VLLCDR 174 (242)
T ss_dssp HHHHT----TCCSEEEEEECC-EEECTT
T ss_pred HHHHh----cCCCCeEEEcCc-eecCCC
Confidence 88763 344 36677763 346654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.40 E-value=4.7e-13 Score=126.04 Aligned_cols=81 Identities=16% Similarity=0.288 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|++|||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ ++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 66789999999999999999999997 8999999999999998888887778999999999998888876 79
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||||..
T Consensus 84 d~lv~~Ag~~ 93 (259)
T 4e6p_A 84 DILVNNAALF 93 (259)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 9999999864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.3e-14 Score=135.84 Aligned_cols=178 Identities=21% Similarity=0.206 Sum_probs=114.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch----hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE----KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~----~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
+++|+||||||+||+|+++++.|+++ |++|++.+|+.. ..+.+..... .+++++++|+. ++|+
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~ 72 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRL 72 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCE
Confidence 56789999999999999999999997 789999999765 2111111000 12333444432 8999
Q ss_pred EEecCCCCCC--------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccch
Q 014177 112 VVHAAGPFQQ--------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 112 Vi~~agp~~~--------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
|||||+.... .++.+++++|.+.+++ +|.+|+...|.... ..+++. .+. .....|+.
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~-----~~~--~p~~~Y~~ 145 (321)
T 3vps_A 73 VYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPED-----SPL--SPRSPYAA 145 (321)
T ss_dssp EEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCC--CCCSHHHH
T ss_pred EEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCC-----CCC--CCCChhHH
Confidence 9999986431 1346799999999974 45666544432110 011111 111 12355999
Q ss_pred hHHHHHHHHHHHHhhcCC-CCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeE
Q 014177 176 SNVMAAELVRVARNESKG-EPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEE 234 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~-~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~ 234 (429)
+|+.++.+++.+.++++. ++..+|. ...+|++......+...+. ..+.++.++.+|..
T Consensus 146 sK~~~E~~~~~~~~~~~~~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (321)
T 3vps_A 146 SKVGLEMVAGAHQRASVAPEVGIVRF-FNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQ 206 (321)
T ss_dssp HHHHHHHHHHHHHHSSSSCEEEEEEE-CEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCC
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEe-ccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCc
Confidence 999999999998877777 8889998 4678887665444443332 23456666666653
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.4e-13 Score=126.96 Aligned_cols=151 Identities=16% Similarity=0.116 Sum_probs=109.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++|+|+|||| ||+|+++++.|+++ |++|++.+|+..+.+.+.. .+++++++|++|.+ ++++|+|||||
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~-----~~~~d~vi~~a 71 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRA---SGAEPLLWPGEEPS-----LDGVTHLLIST 71 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHH---TTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred CCcCcEEEECC-cHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhh---CCCeEEEecccccc-----cCCCCEEEECC
Confidence 34689999998 99999999999998 8999999999988776654 46899999999954 78999999999
Q ss_pred CCCCCC--chHHHHHHHHH--cCCc-EEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhh
Q 014177 117 GPFQQA--PKCTVLEAAIE--TKTA-YIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNE 190 (429)
Q Consensus 117 gp~~~~--~~~~v~~aa~~--~gv~-~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~ 190 (429)
++.... ...+++++|.+ .+++ +|.+|+...|..... .++|. .+. .....|+.+|+.++.+++.+
T Consensus 72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~--~p~~~Y~~sK~~~E~~~~~~--- 141 (286)
T 3ius_A 72 APDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDET-----TPL--TPTAARGRWRVMAEQQWQAV--- 141 (286)
T ss_dssp CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTT-----SCC--CCCSHHHHHHHHHHHHHHHS---
T ss_pred CccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCC-----CCC--CCCCHHHHHHHHHHHHHHhh---
Confidence 876432 23678899988 6665 566665544421110 11111 111 12245999999999998864
Q ss_pred cCCCCeEEEEEeeecCCCC
Q 014177 191 SKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 191 ~~~~v~~i~~~~~~~G~~~ 209 (429)
.+.++..+|. ...+|++.
T Consensus 142 ~~~~~~ilRp-~~v~G~~~ 159 (286)
T 3ius_A 142 PNLPLHVFRL-AGIYGPGR 159 (286)
T ss_dssp TTCCEEEEEE-CEEEBTTB
T ss_pred cCCCEEEEec-cceECCCc
Confidence 3678889998 46788764
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.39 E-value=7.1e-13 Score=136.03 Aligned_cols=173 Identities=17% Similarity=0.117 Sum_probs=120.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHH---HHHH---------------hCCCcEEEEeeC
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAA---MVST---------------LGKNSEFAEVNI 96 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~---l~~~---------------l~~~v~~~~~Dl 96 (429)
...+|+|+||||+|+||+++++.|+++.+ +++|++.+|+.+.... +.+. ...+++++.+|+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 45689999999999999999999998743 5899999998764322 2111 224789999999
Q ss_pred C------ChHHHHHHhcCccEEEecCCCCCC-----------CchHHHHHHHHHcCC-cEEEeCCChhHHHHH-HhhHHH
Q 014177 97 Y------NEGSLLMALRDVDLVVHAAGPFQQ-----------APKCTVLEAAIETKT-AYIDVCDDTIYSQRA-KSFKDR 157 (429)
Q Consensus 97 ~------d~~~l~~~~~~~DvVi~~agp~~~-----------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~-~~~~~~ 157 (429)
+ |.+.+.++++++|+|||||+.... .++.+++++|.+.++ ++|.+|+...|.... ..+.+.
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~ 229 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTED 229 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCc
Confidence 8 667889999999999999986431 246789999999987 567777654432100 011110
Q ss_pred --HHHcCCcEEe--cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 158 --AIAANIPAIT--TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 158 --a~~~g~~~i~--~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
........-. .....||.||+.++.+++.+.++.+.++..+|. .+++|++.
T Consensus 230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRp-g~v~G~~~ 284 (478)
T 4dqv_A 230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRC-GMILADTS 284 (478)
T ss_dssp SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEE-CEEECCSS
T ss_pred ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEEC-ceeeCCCc
Confidence 0000000000 011349999999999999988767888999998 45678653
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-13 Score=133.61 Aligned_cols=147 Identities=17% Similarity=0.213 Sum_probs=92.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
+|+|+||||+|+||+++++.|+++ |++|++.+|+.++ ++ ++++|++|.+++.++++ ++|+|||||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~---------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRAR---------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC-----------------------------CHHHHHHHCCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCC---------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence 579999999999999999999997 7999999987643 12 67899999998888887 499999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
+.... .++.+++++|.+.++++|.+|+...|......++|. .+. .....|+.+|..++
T Consensus 69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~~~~~~E~-----~~~--~~~~~Y~~sK~~~e 141 (315)
T 2ydy_A 69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYREE-----DIP--APLNLYGKTKLDGE 141 (315)
T ss_dssp -------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSSSCSBCTT-----SCC--CCCSHHHHHHHHHH
T ss_pred cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCCCCCCCCC-----CCC--CCcCHHHHHHHHHH
Confidence 86421 235789999999988888887665443211112111 011 11245999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.+++.+ ..+...+|+ .+.+|+...
T Consensus 142 ~~~~~~----~~~~~~lR~-~~v~G~~~~ 165 (315)
T 2ydy_A 142 KAVLEN----NLGAAVLRI-PILYGEVEK 165 (315)
T ss_dssp HHHHHH----CTTCEEEEE-CSEECSCSS
T ss_pred HHHHHh----CCCeEEEee-eeeeCCCCc
Confidence 999865 356778998 456787654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.5e-13 Score=129.74 Aligned_cols=148 Identities=16% Similarity=0.206 Sum_probs=110.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
||+|+||||+|+||+++++.|+++ +++|++.+|+..+. +..+++++.+|++|.+++.++++++|+|||||+.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLGA------AEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCCC------CCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCccc------cCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 578999999999999999999997 79999999987642 1135788999999999999999999999999986
Q ss_pred CCC-----------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 119 FQQ-----------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 119 ~~~-----------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
... .++.+++++|.+.++. .|.+|+...+.... ..+++. .+. .....|+.+|..++.++
T Consensus 74 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~-----~~~--~~~~~Y~~sK~~~e~~~ 146 (267)
T 3ay3_A 74 SVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTE-----VPR--RPDSLYGLSKCFGEDLA 146 (267)
T ss_dssp CSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTT-----SCC--CCCSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCC-----CCC--CCCChHHHHHHHHHHHH
Confidence 422 1346889999998874 56666544332110 112111 111 12245999999999999
Q ss_pred HHHHhhcCCCCeEEEEE
Q 014177 185 RVARNESKGEPERLRFS 201 (429)
Q Consensus 185 ~~~~~~~~~~v~~i~~~ 201 (429)
+.+.++++.++..+|..
T Consensus 147 ~~~~~~~gi~~~~lrp~ 163 (267)
T 3ay3_A 147 SLYYHKFDIETLNIRIG 163 (267)
T ss_dssp HHHHHTTCCCEEEEEEC
T ss_pred HHHHHHcCCCEEEEece
Confidence 88776777888888884
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.4e-12 Score=120.04 Aligned_cols=81 Identities=19% Similarity=0.214 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+.++.++.++++|++|.++++++++ ++
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence 56789999999999999999999997 8999999999999998888777789999999999999888776 78
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||+||..
T Consensus 81 d~lv~~Ag~~ 90 (281)
T 3m1a_A 81 DVLVNNAGRT 90 (281)
T ss_dssp SEEEECCCCE
T ss_pred CEEEECCCcC
Confidence 9999999854
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.1e-12 Score=119.75 Aligned_cols=81 Identities=23% Similarity=0.319 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+..++.++++|++|.++++++++ ++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i 87 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGF 87 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 56789999999999999999999997 8999999999988888777665568889999999999888876 79
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||+||..
T Consensus 88 D~lv~~Ag~~ 97 (263)
T 3ak4_A 88 DLLCANAGVS 97 (263)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCcC
Confidence 9999999854
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.8e-12 Score=121.79 Aligned_cols=133 Identities=19% Similarity=0.160 Sum_probs=100.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~ 120 (429)
+|+||||+|++|+++++.|+++.++++|++.+|++++.+.+.. .+++++.+|++|.+++.++++++|+|||+++...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 77 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---QGITVRQADYGDEAALTSALQGVEKLLLISSSEV 77 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---TTCEEEECCTTCHHHHHHHTTTCSEEEECC----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc
Confidence 5899999999999999999985347899999999887665543 3688999999999999999999999999998531
Q ss_pred ---CCchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCe
Q 014177 121 ---QAPKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE 196 (429)
Q Consensus 121 ---~~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~ 196 (429)
..++.+++++|.+.|++. |.+|+...+ . ....|+.+|..++.+++. .+.++.
T Consensus 78 ~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~------------~--------~~~~y~~sK~~~e~~~~~----~~~~~~ 133 (286)
T 2zcu_A 78 GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD------------T--------SPLGLADEHIETEKMLAD----SGIVYT 133 (286)
T ss_dssp ----CHHHHHHHHHHHHTCCEEEEEEETTTT------------T--------CCSTTHHHHHHHHHHHHH----HCSEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC------------C--------CcchhHHHHHHHHHHHHH----cCCCeE
Confidence 135678999999999854 555543332 0 113588999988888763 455666
Q ss_pred EEEE
Q 014177 197 RLRF 200 (429)
Q Consensus 197 ~i~~ 200 (429)
.+|.
T Consensus 134 ilrp 137 (286)
T 2zcu_A 134 LLRN 137 (286)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 6665
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=6.2e-13 Score=127.76 Aligned_cols=154 Identities=18% Similarity=0.246 Sum_probs=112.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhH--HHHHHHhCCCcEEEEeeCCChHHHHHHhcC-----ccEE
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKG--AAMVSTLGKNSEFAEVNIYNEGSLLMALRD-----VDLV 112 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~--~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~-----~DvV 112 (429)
+|+||||+||+|+++++.|+++ | ++|++.+|+.... ..+. ++. +.+|++|.+.+.+++++ +|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~v 72 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLV-----DLN-IADYMDKEDFLIQIMAGEEFGDVEAI 72 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHH-----TSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CEEEEcCccHHHHHHHHHHHHC--CCcEEEEEccCCCCchhhhcC-----cce-eccccccHHHHHHHHhccccCCCcEE
Confidence 5899999999999999999997 7 8999999876542 2221 233 67899999999998875 9999
Q ss_pred EecCCCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHH
Q 014177 113 VHAAGPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 113 i~~agp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
||||+.... .++.+++++|.+.++++|.+|+...|..... .++|.. +. .....|+.+|.
T Consensus 73 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~-----~~--~p~~~Y~~sK~ 145 (310)
T 1eq2_A 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESRE-----YE--KPLNVYGYSKF 145 (310)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGG-----GC--CCSSHHHHHHH
T ss_pred EECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCCC-----CC--CCCChhHHHHH
Confidence 999986532 1356889999999887777776554422110 111111 10 11245999999
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 179 MAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.++.+++.+.++++.++..+|. ...+|++..
T Consensus 146 ~~e~~~~~~~~~~g~~~~~lrp-~~v~G~~~~ 176 (310)
T 1eq2_A 146 LFDEYVRQILPEANSQIVGFRY-FNVYGPREG 176 (310)
T ss_dssp HHHHHHHHHGGGCSSCEEEEEE-CEEESSSCG
T ss_pred HHHHHHHHHHHHcCCCEEEEeC-CcEECcCCC
Confidence 9999999988777788889998 456888754
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=8.4e-13 Score=141.70 Aligned_cols=164 Identities=20% Similarity=0.255 Sum_probs=114.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH----HHHHHHhCCCcEEEEeeCCChHHHHHHhc--Cc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG----AAMVSTLGKNSEFAEVNIYNEGSLLMALR--DV 109 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~----~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~ 109 (429)
.+++|+||||||+|+||+++++.|+++ +++|++++|+.... +.+......++.++++|++|.+++.++++ ++
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 85 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKI 85 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCC
Confidence 366789999999999999999999997 78999999875432 22222123568899999999999999988 89
Q ss_pred cEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-----HhhHHHHHHcCCcEEec
Q 014177 110 DLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-----KSFKDRAIAANIPAITT 168 (429)
Q Consensus 110 DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-----~~~~~~a~~~g~~~i~~ 168 (429)
|+|||||+.... .++.+++++|.+.++. .|.+|+...|.... ..+.+. .+ ..
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~-----~~--~~ 158 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CP--LG 158 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SC--CC
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCcccc-----CC--CC
Confidence 999999986531 2356788999888875 46666544332110 011110 01 01
Q ss_pred CCCccchhHHHHHHHHHHHHhh--cCCCCeEEEEEeeecCCCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNE--SKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~--~~~~v~~i~~~~~~~G~~~ 209 (429)
....|+.+|..++.+++.+.++ .+.++..+|+ .+.+|+++
T Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~-~~vyG~~~ 200 (699)
T 1z45_A 159 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY-FNPIGAHP 200 (699)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEE-CEEECCCT
T ss_pred CCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEe-ccccCCCc
Confidence 1245999999999999887655 5667788897 56788753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-12 Score=123.07 Aligned_cols=102 Identities=22% Similarity=0.249 Sum_probs=84.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
|++|+|+||+|++|+++++.|+++ |++|++.+|+. ++.+.+......+++++++|++|.+++.++++++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 578999999999999999999998 78999999987 555443221124689999999999999999999999
Q ss_pred EEecCCCCCCCchHHHHHHHHHcC-CcEEEeC
Q 014177 112 VVHAAGPFQQAPKCTVLEAAIETK-TAYIDVC 142 (429)
Q Consensus 112 Vi~~agp~~~~~~~~v~~aa~~~g-v~~vdis 142 (429)
|||+++.....++.+++++|.+.| ++++..+
T Consensus 80 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 111 (307)
T 2gas_A 80 VICAAGRLLIEDQVKIIKAIKEAGNVKKFFPS 111 (307)
T ss_dssp EEECSSSSCGGGHHHHHHHHHHHCCCSEEECS
T ss_pred EEECCcccccccHHHHHHHHHhcCCceEEeec
Confidence 999998765556689999999998 8776543
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=7.1e-13 Score=123.12 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|.+|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+.++.++.++++|++|.++++++++ ++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 45689999999999999999999997 8999999999999888887776568899999999998888775 68
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||+||..
T Consensus 79 d~lvnnAg~~ 88 (235)
T 3l6e_A 79 ELVLHCAGTG 88 (235)
T ss_dssp SEEEEECCCC
T ss_pred cEEEECCCCC
Confidence 9999999864
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.1e-13 Score=128.68 Aligned_cols=139 Identities=14% Similarity=0.181 Sum_probs=103.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
|+||||||+|+||+++++.|+++ |++|++.+|. ++|++|.+++.++++ ++|+|||||+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~------------------~~D~~d~~~~~~~~~~~~~d~vi~~a~ 65 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE--EYDIYPFDKK------------------LLDITNISQVQQVVQEIRPHIIIHCAA 65 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTT------------------TSCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCEEEEeccc------------------ccCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 48999999999999999999997 8999999982 269999999999998 7999999998
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .++.+++++|.+.++++|.+|+...|.... ..++|. .+ ......|+.+|..++
T Consensus 66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~--~~p~~~Y~~sK~~~E 138 (287)
T 3sc6_A 66 YTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEF-----HN--PAPINIYGASKYAGE 138 (287)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTT-----SC--CCCCSHHHHHHHHHH
T ss_pred ccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCC-----CC--CCCCCHHHHHHHHHH
Confidence 6532 134679999999999888888665442110 112211 11 112345999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.+++.+. .+...+|. ...+|++..
T Consensus 139 ~~~~~~~----~~~~ilR~-~~v~G~~~~ 162 (287)
T 3sc6_A 139 QFVKELH----NKYFIVRT-SWLYGKYGN 162 (287)
T ss_dssp HHHHHHC----SSEEEEEE-CSEECSSSC
T ss_pred HHHHHhC----CCcEEEee-eeecCCCCC
Confidence 9998754 35678888 456887643
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=4.8e-12 Score=118.95 Aligned_cols=82 Identities=22% Similarity=0.265 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----------CCcEEEEeeCCChHHHHHH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----------KNSEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----------~~v~~~~~Dl~d~~~l~~~ 105 (429)
++++++|+||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 81 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL 81 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence 467789999999999999999999997 8999999999988877765542 3578899999999988887
Q ss_pred hcC-------c-cEEEecCCCC
Q 014177 106 LRD-------V-DLVVHAAGPF 119 (429)
Q Consensus 106 ~~~-------~-DvVi~~agp~ 119 (429)
+++ + |+|||+||..
T Consensus 82 ~~~~~~~~g~i~d~vi~~Ag~~ 103 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVVSCAGIT 103 (264)
T ss_dssp HHHHHHHHSSCCSEEEECCCCC
T ss_pred HHHHHHHhCCCCeEEEECCCcC
Confidence 764 3 9999999854
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=121.80 Aligned_cols=83 Identities=22% Similarity=0.302 Sum_probs=74.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ +
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999997 8999999999999998888887788999999999998888775 7
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|+|||+||...
T Consensus 102 iD~lvnnAg~~~ 113 (266)
T 3grp_A 102 IDILVNNAGITR 113 (266)
T ss_dssp CCEEEECCCCC-
T ss_pred CCEEEECCCCCC
Confidence 999999998653
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=3.8e-12 Score=118.82 Aligned_cols=86 Identities=21% Similarity=0.304 Sum_probs=74.9
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---Cc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DV 109 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~ 109 (429)
....+++++|+||||+|+||+++++.|+++ |++|++.+|+.++++++.+.+..++.+..+|++|.+++.++++ ++
T Consensus 8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 8 HMIDLTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp -CCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred ccccCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 344578899999999999999999999997 8999999999999999888887788999999999999988887 68
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+|||+||...
T Consensus 86 d~li~~Ag~~~ 96 (249)
T 3f9i_A 86 DILVCNAGITS 96 (249)
T ss_dssp SEEEECCC---
T ss_pred CEEEECCCCCC
Confidence 99999998643
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=3.1e-12 Score=122.90 Aligned_cols=102 Identities=23% Similarity=0.317 Sum_probs=83.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch------hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE------KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~------~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
+++|+|+||+|++|+++++.|+++ |++|++.+|+.. +.+.+......+++++++|++|.+++.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 578999999999999999999997 789999999743 333222212346899999999999999999999999
Q ss_pred EecCCCCCCCchHHHHHHHHHcC-CcEEEeC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETK-TAYIDVC 142 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~g-v~~vdis 142 (429)
||+++.....++.+++++|.+.| ++++..|
T Consensus 82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 112 (308)
T 1qyc_A 82 ISTVGSLQIESQVNIIKAIKEVGTVKRFFPS 112 (308)
T ss_dssp EECCCGGGSGGGHHHHHHHHHHCCCSEEECS
T ss_pred EECCcchhhhhHHHHHHHHHhcCCCceEeec
Confidence 99998754445689999999998 8877543
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=6e-12 Score=116.88 Aligned_cols=81 Identities=23% Similarity=0.209 Sum_probs=70.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. +++++.+|++|.++++++++ ++|+|
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~id~v 80 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDATEKALGGIGPVDLL 80 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcc-CCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence 367789999999999999999999997 8999999999988877766553 57788999999999999886 48999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||+||..
T Consensus 81 i~~Ag~~ 87 (244)
T 1cyd_A 81 VNNAALV 87 (244)
T ss_dssp EECCCCC
T ss_pred EECCccc
Confidence 9999853
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-12 Score=122.11 Aligned_cols=101 Identities=24% Similarity=0.250 Sum_probs=83.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-----hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-----EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-----~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+|+|+|+||+|++|+++++.|+++ +++|++.+|+. ++.+.+......+++++++|++|.+++.++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 578999999999999999999997 78999999984 34433322223568999999999999999999999999
Q ss_pred ecCCCC----CCCchHHHHHHHHHcC-CcEEEe
Q 014177 114 HAAGPF----QQAPKCTVLEAAIETK-TAYIDV 141 (429)
Q Consensus 114 ~~agp~----~~~~~~~v~~aa~~~g-v~~vdi 141 (429)
|+++.. ...++.+++++|.+.| ++++..
T Consensus 82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred ECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence 999865 2345689999999999 887754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4e-12 Score=122.96 Aligned_cols=103 Identities=19% Similarity=0.201 Sum_probs=84.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++++|+|+||+|++|+++++.|+++ |++|++.+|+.. +.+.+.+....+++++++|++|.+++.++++++|+|||++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a 87 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL 87 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 3468999999999999999999997 789999999875 4333321112468999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHcC-CcEEEeC
Q 014177 117 GPFQQAPKCTVLEAAIETK-TAYIDVC 142 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~g-v~~vdis 142 (429)
++....++.+++++|.+.| ++++..+
T Consensus 88 ~~~~~~~~~~l~~aa~~~g~v~~~v~S 114 (318)
T 2r6j_A 88 AFPQILDQFKILEAIKVAGNIKRFLPS 114 (318)
T ss_dssp CGGGSTTHHHHHHHHHHHCCCCEEECS
T ss_pred chhhhHHHHHHHHHHHhcCCCCEEEee
Confidence 8754445689999999998 8877543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.7e-12 Score=117.31 Aligned_cols=82 Identities=23% Similarity=0.374 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++|+||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+ +.++.++++|++|.++++++++
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 366789999999999999999999997 899999999988776665544 3468899999999998888775
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 88 ~~~id~vi~~Ag~~ 101 (260)
T 3awd_A 88 EGRVDILVACAGIC 101 (260)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 789999999854
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-11 Score=118.81 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=71.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc---
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.++++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 3577899999999999999999999997 899999999988877666554 4578899999999998888776
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 100 ~~~g~id~li~~Ag~~ 115 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGN 115 (302)
T ss_dssp HHTCSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 469999999853
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=6.6e-12 Score=118.94 Aligned_cols=83 Identities=14% Similarity=0.377 Sum_probs=72.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc-----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
..+++++++||||+|+||+++++.|+++ |++|++.+|+.++.+.+.+++.. ++.++++|++|.++++++++
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 89 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3477899999999999999999999997 89999999998887777666643 68899999999999888876
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 90 ~~~id~li~~Ag~~ 103 (278)
T 2bgk_A 90 HGKLDIMFGNVGVL 103 (278)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCccc
Confidence 799999999854
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.34 E-value=9.1e-14 Score=132.53 Aligned_cols=149 Identities=15% Similarity=0.148 Sum_probs=108.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC-ccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD-VDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~-~DvVi~~ 115 (429)
|++|+||||| +||+|+++++.|+++ |++|++.+|+.+++ ..+++++++|++|.+++.+++++ +|+|||+
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~--g~~V~~~~r~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQ--GHEVTGLRRSAQPM-------PAGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECTTSCC-------CTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCcccc-------ccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 4568999999 599999999999997 78999999987753 35789999999999999998887 9999999
Q ss_pred CCCCCC----------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 116 AGPFQQ----------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 116 agp~~~----------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
|++... .++.+++++|.+.++. +|.+|+...|.... ..++|. .+ ......||.+|..++.+
T Consensus 71 a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~--~~p~~~Y~~sK~~~E~~ 143 (286)
T 3gpi_A 71 VAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDED-----TP--PIAKDFSGKRMLEAEAL 143 (286)
T ss_dssp HHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTT-----SC--CCCCSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCC-----CC--CCCCChhhHHHHHHHHH
Confidence 975321 2467899999988875 46666544432110 011111 11 11224589999998888
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.. + .++..+|. .+.+|++.
T Consensus 144 -~~----~-~~~~ilR~-~~v~G~~~ 162 (286)
T 3gpi_A 144 -LA----A-YSSTILRF-SGIYGPGR 162 (286)
T ss_dssp -GG----G-SSEEEEEE-CEEEBTTB
T ss_pred -Hh----c-CCeEEEec-ccccCCCc
Confidence 53 3 67788998 46788765
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=2.7e-12 Score=121.90 Aligned_cols=81 Identities=17% Similarity=0.306 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---C---CCcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---G---KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~---~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ . .++.++++|++|.++++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence 66789999999999999999999997 899999999998888776665 2 357889999999999888876
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~~g~id~lv~~Ag~~ 97 (278)
T 1spx_A 82 GKFGKLDILVNNAGAA 97 (278)
T ss_dssp HHHSCCCEEEECCC--
T ss_pred HHcCCCCEEEECCCCC
Confidence 899999999864
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.34 E-value=6.2e-12 Score=118.17 Aligned_cols=82 Identities=20% Similarity=0.276 Sum_probs=64.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.+++++..++++.++.++++|++|.++++++++ +
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 367799999999999999999999997 8999999999998888777776678999999999998888876 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|++||+||..
T Consensus 82 id~lv~nAg~~ 92 (257)
T 3tpc_A 82 VHGLVNCAGTA 92 (257)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999865
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-12 Score=120.03 Aligned_cols=84 Identities=25% Similarity=0.329 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc---
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+.++++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 4 ~~~~~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 4 SMRFENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34578899999999999999999999997 899999999999888777665 3467889999999998888876
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 82 ~~~g~id~li~~Ag~~ 97 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAIF 97 (253)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 799999999863
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.34 E-value=5e-12 Score=122.32 Aligned_cols=102 Identities=14% Similarity=0.127 Sum_probs=83.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc------hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR------EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~------~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
||+|+|+||+|++|+++++.|+++ +++|++.+|+. ++.+.+......+++++++|++|.+++.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v 81 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV 81 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence 578999999999999999999997 78999999986 2333332211246899999999999999999999999
Q ss_pred EecCCCCCCCchHHHHHHHHHcC-CcEEEeC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETK-TAYIDVC 142 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~g-v~~vdis 142 (429)
|||++.....++.+++++|.+.| ++++..+
T Consensus 82 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 112 (321)
T 3c1o_A 82 ISALPFPMISSQIHIINAIKAAGNIKRFLPS 112 (321)
T ss_dssp EECCCGGGSGGGHHHHHHHHHHCCCCEEECS
T ss_pred EECCCccchhhHHHHHHHHHHhCCccEEecc
Confidence 99998754445689999999999 8776543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.33 E-value=9.2e-12 Score=119.32 Aligned_cols=140 Identities=18% Similarity=0.116 Sum_probs=103.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHH--HHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGA--AMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~--~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+|+|+|+||+|++|+++++.|+++ + ++|++.+|++++.. .+.. .+++++++|++|.+++.++++++|+|||+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~---~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRL---QGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHH---TTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHH---CCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 478999999999999999999997 6 89999999987643 2222 46899999999999999999999999999
Q ss_pred CCCCCC-------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQ-------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~-------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
++.... .+..+++++|.+.|++.+..++....+.. ..+. ....|+.+|..++.+++.
T Consensus 80 a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~---------~~~~-----~~~~y~~sK~~~e~~~~~-- 143 (299)
T 2wm3_A 80 TNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL---------TAGR-----LAAAHFDGKGEVEEYFRD-- 143 (299)
T ss_dssp CCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHH---------TTTS-----CCCHHHHHHHHHHHHHHH--
T ss_pred CCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCcccccc---------CCCc-----ccCchhhHHHHHHHHHHH--
Confidence 975321 13468899999999876544444332211 0111 113477888888887763
Q ss_pred hhcCCCCeEEEEE
Q 014177 189 NESKGEPERLRFS 201 (429)
Q Consensus 189 ~~~~~~v~~i~~~ 201 (429)
.+.++..+|..
T Consensus 144 --~gi~~~ilrp~ 154 (299)
T 2wm3_A 144 --IGVPMTSVRLP 154 (299)
T ss_dssp --HTCCEEEEECC
T ss_pred --CCCCEEEEeec
Confidence 46677777764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=7.4e-13 Score=126.75 Aligned_cols=142 Identities=15% Similarity=0.139 Sum_probs=105.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC--ccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD--VDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi~~ag 117 (429)
|+|+||||+||+|+++++.|+ + |++|++.+|+.. .+.+|++|.+++.+++++ +|+|||||+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~--------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHSK--------------EFCGDFSNPKGVAETVRKLRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTCS--------------SSCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-c--CCeEEEeccccc--------------cccccCCCHHHHHHHHHhcCCCEEEECcc
Confidence 489999999999999999999 6 799999999752 246899999999999885 999999998
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .++.+++++|.+.++++|.+|+...|..... .++|. .+. .....|+.+|..++
T Consensus 64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~--~p~~~Y~~sK~~~E 136 (299)
T 1n2s_A 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DAT--SPLNVYGKTKLAGE 136 (299)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCC--CCSSHHHHHHHHHH
T ss_pred cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCC-----CCC--CCccHHHHHHHHHH
Confidence 6431 2357889999998988888876554422110 11111 111 11245999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.+++.+. .++..+|. ...+|++..
T Consensus 137 ~~~~~~~----~~~~ilRp-~~v~G~~~~ 160 (299)
T 1n2s_A 137 KALQDNC----PKHLIFRT-SWVYAGKGN 160 (299)
T ss_dssp HHHHHHC----SSEEEEEE-CSEECSSSC
T ss_pred HHHHHhC----CCeEEEee-eeecCCCcC
Confidence 9998654 36788888 456887653
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=3.2e-11 Score=114.28 Aligned_cols=82 Identities=20% Similarity=0.282 Sum_probs=74.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.+++++..++++.++.++++|++|.++++++++ +
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARA--GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999997 8999999999999998888887788999999999999888876 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|++||+||..
T Consensus 86 id~lv~nAg~~ 96 (271)
T 3tzq_B 86 LDIVDNNAAHS 96 (271)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999865
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2e-12 Score=120.93 Aligned_cols=83 Identities=22% Similarity=0.326 Sum_probs=75.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 3578899999999999999999999997 8999999999999998888887788999999999998888876
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 80 ~id~lv~nAg~~ 91 (247)
T 3rwb_A 80 GIDILVNNASIV 91 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999999864
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.6e-12 Score=121.11 Aligned_cols=82 Identities=17% Similarity=0.213 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 4 GISGKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 366789999999999999999999997 899999999988877766554 4568889999999998888776
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 82 SFGGADILVNNAGTG 96 (263)
T ss_dssp HHSSCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 799999999864
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.5e-12 Score=127.97 Aligned_cols=164 Identities=14% Similarity=0.072 Sum_probs=111.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh---HHHHHH------------HhCCCcEEEEeeCCChHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK---GAAMVS------------TLGKNSEFAEVNIYNEGS 101 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~---~~~l~~------------~l~~~v~~~~~Dl~d~~~ 101 (429)
..+++||||||+|+||+++++.|++. +++|++.+|+... .+.+.+ ....++.++.+|++|.++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 45679999999999999999999876 8999999998872 222222 112578999999999887
Q ss_pred HHHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-------HhhHHHHHHcC
Q 014177 102 LLMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-------KSFKDRAIAAN 162 (429)
Q Consensus 102 l~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-------~~~~~~a~~~g 162 (429)
+. .+.++|+|||||+.... .++.+++++|.+.+.++|.+|+... ... ..+.|. .
T Consensus 145 l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~--G~~~~~~~~~~~~~E~----~ 217 (427)
T 4f6c_A 145 VV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV--GTYFDIDTEDVTFSEA----D 217 (427)
T ss_dssp CC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG--GSEECSSCSCCEECTT----C
T ss_pred CC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh--CCCccCCCCCcccccc----c
Confidence 77 67799999999986532 2457889999885556676665443 100 011110 0
Q ss_pred CcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 163 IPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 163 ~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
...-......|+.||+.++.+++.+. +.+.++..+|.. +++|+...+
T Consensus 218 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg-~v~G~~~~~ 264 (427)
T 4f6c_A 218 VYKGQLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVG-NLTSPYNGR 264 (427)
T ss_dssp SCSSCCCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEEC-CEESCSSSC
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCC-eeecCCCCC
Confidence 00000123459999999999999876 367788899984 567876543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.9e-11 Score=112.61 Aligned_cols=79 Identities=16% Similarity=0.166 Sum_probs=69.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999997 799999999998888776655 2457889999999999888876
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 80 ~id~li~~Ag~~ 91 (250)
T 2cfc_A 80 AIDVLVNNAGIT 91 (250)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999999854
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-12 Score=121.69 Aligned_cols=88 Identities=27% Similarity=0.292 Sum_probs=71.9
Q ss_pred CCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHH
Q 014177 30 GAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 30 ~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~ 105 (429)
..+...++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++
T Consensus 12 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~ 89 (267)
T 1vl8_A 12 HMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL 89 (267)
T ss_dssp -----CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred CCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 334445577899999999999999999999997 899999999988877766554 45688899999999988877
Q ss_pred hc-------CccEEEecCCCC
Q 014177 106 LR-------DVDLVVHAAGPF 119 (429)
Q Consensus 106 ~~-------~~DvVi~~agp~ 119 (429)
++ ++|+|||+||..
T Consensus 90 ~~~~~~~~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 90 LEAVKEKFGKLDTVVNAAGIN 110 (267)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 75 799999999864
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=7.3e-12 Score=118.29 Aligned_cols=140 Identities=14% Similarity=0.154 Sum_probs=97.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc---
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+.+++++|+||||+|+||+++++.|+++ |++|++.+| +.++++++.+++ +.++.++++|++|.++++++++
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999997 899999999 777766655543 3568889999999999888876
Q ss_pred ----CccEEEecCCCCCC-------------------CchHHHHHHHHHc---CCcEEEeCCChhHHHHHHhhHHHHHHc
Q 014177 108 ----DVDLVVHAAGPFQQ-------------------APKCTVLEAAIET---KTAYIDVCDDTIYSQRAKSFKDRAIAA 161 (429)
Q Consensus 108 ----~~DvVi~~agp~~~-------------------~~~~~v~~aa~~~---gv~~vdis~~~~~~~~~~~~~~~a~~~ 161 (429)
++|+|||+||.... .+...+.+++++. +.+.|.+++...+..
T Consensus 95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~------------ 162 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT------------ 162 (274)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC------------
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccC------------
Confidence 79999999985421 1223344444433 323344443322100
Q ss_pred CCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 162 NIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 162 g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
+.+ ....|+.||...+.+++.+.+++.
T Consensus 163 ~~~----~~~~Y~~sK~a~~~~~~~~~~e~~ 189 (274)
T 1ja9_A 163 GIP----NHALYAGSKAAVEGFCRAFAVDCG 189 (274)
T ss_dssp SCC----SCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCC----CCchHHHHHHHHHHHHHHHHHHhh
Confidence 000 012388999999999888876653
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-12 Score=121.52 Aligned_cols=82 Identities=22% Similarity=0.361 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++..++.++++|++|.++++++++ +
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 367789999999999999999999997 8999999999988887777665457889999999999888877 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 82 iD~lv~~Ag~~ 92 (260)
T 1nff_A 82 LHVLVNNAGIL 92 (260)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999854
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.6e-12 Score=122.31 Aligned_cols=83 Identities=22% Similarity=0.276 Sum_probs=74.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4467899999999999999999999997 8999999999999988888887788999999999998888776
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 101 ~iD~lv~nAg~~ 112 (277)
T 4dqx_A 101 RVDVLVNNAGFG 112 (277)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 799999999854
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.32 E-value=6.1e-12 Score=124.36 Aligned_cols=126 Identities=20% Similarity=0.144 Sum_probs=100.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|+|+||||+|++|+++++.|+++ ++ +|++.||+ .|.+++.++++++|+|||+|+.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~----------------------~d~~~l~~~~~~~d~Vih~a~~ 56 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ----------------------TKEEELESALLKADFIVHLAGV 56 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT----------------------CCHHHHHHHHHHCSEEEECCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC----------------------CCHHHHHHHhccCCEEEECCcC
Confidence 58999999999999999999998 66 77776664 6778888999999999999986
Q ss_pred CCC-----------CchHHHHHHHHHcCCc--EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHH
Q 014177 119 FQQ-----------APKCTVLEAAIETKTA--YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 119 ~~~-----------~~~~~v~~aa~~~gv~--~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~ 185 (429)
... .++.+++++|.+.+++ +|.+|+...+. ...|+.+|..++.+++
T Consensus 57 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------------~~~Y~~sK~~~E~~~~ 115 (369)
T 3st7_A 57 NRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------------DNPYGESKLQGEQLLR 115 (369)
T ss_dssp BCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------------CSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------------CCCchHHHHHHHHHHH
Confidence 422 2467899999999865 56666544331 3559999999999999
Q ss_pred HHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 186 VARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 186 ~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
.+.++.+.++..+|. .+.+|++..+
T Consensus 116 ~~~~~~g~~~~i~R~-~~v~G~~~~~ 140 (369)
T 3st7_A 116 EYAEEYGNTVYIYRW-PNLFGKWCKP 140 (369)
T ss_dssp HHHHHHCCCEEEEEE-CEEECTTCCT
T ss_pred HHHHHhCCCEEEEEC-CceeCCCCCC
Confidence 988778889999998 4678876543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-11 Score=115.37 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=69.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHh------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMAL------ 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~------ 106 (429)
++++|+|+||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++.+|++|.+++++++
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 88 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 467799999999999999999999997 899999999988877765544 346888999999999888877
Q ss_pred --cCccEEEecCCCC
Q 014177 107 --RDVDLVVHAAGPF 119 (429)
Q Consensus 107 --~~~DvVi~~agp~ 119 (429)
.++|+|||+||..
T Consensus 89 ~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 89 FGGKLDILINNLGAI 103 (266)
T ss_dssp HTTCCSEEEEECCC-
T ss_pred hCCCCcEEEECCCCC
Confidence 5789999999854
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=5.1e-13 Score=128.94 Aligned_cols=152 Identities=16% Similarity=0.199 Sum_probs=110.0
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAGP 118 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~agp 118 (429)
+||||||+||||+++++.|+++..+++|++.+|+..+.+ ++.++.+|++|.+++.++++ ++|+|||+|+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 72 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGI 72 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------CceEEEecCCCHHHHHHHHhhcCCcEEEECCcc
Confidence 589999999999999999998623578999998765421 46789999999999999998 89999999986
Q ss_pred CCC--------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHH--hhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 119 FQQ--------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAK--SFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 119 ~~~--------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
... .++.+++++|.+.++ ++|.+|+...|..... ...+ . .+ ......|+.+|..++
T Consensus 73 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e----~-~~--~~p~~~Y~~sK~~~e 145 (317)
T 3ajr_A 73 LSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPS----I-TI--TRPRTMFGVTKIAAE 145 (317)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCS----S-SC--CCCCSHHHHHHHHHH
T ss_pred cCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccc----c-cc--CCCCchHHHHHHHHH
Confidence 421 135688999999998 4566665444321100 0000 0 01 112345999999999
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~ 208 (429)
.+++.+.++++.++..+|. ...+|+.
T Consensus 146 ~~~~~~~~~~~~~~~~lR~-~~~~g~~ 171 (317)
T 3ajr_A 146 LLGQYYYEKFGLDVRSLRY-PGIISYK 171 (317)
T ss_dssp HHHHHHHHHHCCEEEEEEE-CEEECSS
T ss_pred HHHHHHHHhcCCeEEEEec-CcEeccC
Confidence 9998887777778888887 4567754
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=117.14 Aligned_cols=83 Identities=17% Similarity=0.265 Sum_probs=73.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999997 8999999999998887776553 468899999999999888876
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 107 ~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 107 LGGIDIAVCNAGIVS 121 (276)
T ss_dssp HSCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 7999999998654
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.9e-12 Score=119.75 Aligned_cols=146 Identities=10% Similarity=0.011 Sum_probs=99.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+|+||||||++.||+++++.|++. |++|++.+|+.++++++.++. .++..+++|++|+++++++++ ++|
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKER-PNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhc-CCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4589999999999999999999998 899999999999888887765 468889999999998887765 799
Q ss_pred EEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------CccchhH
Q 014177 111 LVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG---------IYPGVSN 177 (429)
Q Consensus 111 vVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g---------~~pG~s~ 177 (429)
++||+||...... +..-++..++. +-...|......+....+..|..+.+++. ..|+.||
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~v-------Nl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asK 150 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV-------GLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAK 150 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH-------HhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHH
Confidence 9999998643210 12223333222 11122221111122222334544444321 1278889
Q ss_pred HHHHHHHHHHHhhcCC
Q 014177 178 VMAAELVRVARNESKG 193 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~ 193 (429)
.....+.+.+..++..
T Consensus 151 aal~~ltk~lA~ela~ 166 (247)
T 3ged_A 151 GGIVALTHALAMSLGP 166 (247)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCC
Confidence 8888888888877754
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.31 E-value=6.3e-12 Score=118.19 Aligned_cols=84 Identities=20% Similarity=0.293 Sum_probs=75.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+++++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4577899999999999999999999997 8999999999999999888887789999999999998888776
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 83 ~id~li~~Ag~~~ 95 (261)
T 3n74_A 83 KVDILVNNAGIGH 95 (261)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 7899999998653
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-11 Score=113.53 Aligned_cols=81 Identities=27% Similarity=0.216 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
++++++|+||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. +.+++++|++|.++++++++ ++|+|
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~id~v 80 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALGSVGPVDLL 80 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcC-CCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence 366789999999999999999999997 8999999999988887776653 56788999999999999886 58999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||+||..
T Consensus 81 i~~Ag~~ 87 (244)
T 3d3w_A 81 VNNAAVA 87 (244)
T ss_dssp EECCCCC
T ss_pred EECCccC
Confidence 9999854
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-12 Score=121.36 Aligned_cols=152 Identities=14% Similarity=0.175 Sum_probs=107.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.++.++.++++|++|.++++++++ ++|+|
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 467899999999999999999999997 8999999999999998888776678999999999999999887 67999
Q ss_pred EecCCCCCC-----------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc
Q 014177 113 VHAAGPFQQ-----------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG 174 (429)
Q Consensus 113 i~~agp~~~-----------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG 174 (429)
||+||.... .+...+++++....... |.+++...+.... ...+.. ....+ ......|+
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~-~~~~~~-~~~~~--~~~~~~Y~ 166 (291)
T 3rd5_A 91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRI-NLEDLN-WRSRR--YSPWLAYS 166 (291)
T ss_dssp EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCC-CSSCTT-CSSSC--CCHHHHHH
T ss_pred EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCC-Cccccc-ccccC--CCCcchHH
Confidence 999986431 13456677776665433 4555433321100 000000 00000 00112499
Q ss_pred hhHHHHHHHHHHHHhhcCC
Q 014177 175 VSNVMAAELVRVARNESKG 193 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~ 193 (429)
.||.....+++.+.+++..
T Consensus 167 ~sK~a~~~~~~~la~e~~~ 185 (291)
T 3rd5_A 167 QSKLANLLFTSELQRRLTA 185 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999888888766543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=4.3e-12 Score=118.64 Aligned_cols=81 Identities=23% Similarity=0.352 Sum_probs=70.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67799999999999999999999997 899999999998888776654 3468889999999998887765
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 83 g~id~lv~nAg~~ 95 (247)
T 2jah_A 83 GGLDILVNNAGIM 95 (247)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 799999999854
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=6.3e-12 Score=118.67 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367899999999999999999999997 899999999999888777655 3568899999999998888775
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 86 ~g~id~lv~nAg~~ 99 (264)
T 3ucx_A 86 YGRVDVVINNAFRV 99 (264)
T ss_dssp TSCCSEEEECCCSC
T ss_pred cCCCcEEEECCCCC
Confidence 789999999764
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.7e-11 Score=116.47 Aligned_cols=82 Identities=23% Similarity=0.301 Sum_probs=69.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. .++.++++|++|.++++++++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 367899999999999999999999997 8999999999888777665442 346788999999998888776
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 107 ~~~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 107 SQHSGVDICINNAGLA 122 (279)
T ss_dssp HHHCCCSEEEECCCCC
T ss_pred HhCCCCCEEEECCCCC
Confidence 799999999854
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=115.82 Aligned_cols=82 Identities=16% Similarity=0.319 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++++|+||||+|+||+++++.|+++ |++|++.+| +.++++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 366789999999999999999999997 899999999 777776665544 3457889999999998888776
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~g~id~li~~Ag~~ 96 (261)
T 1gee_A 82 EFGKLDVMINNAGLE 96 (261)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 789999999854
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=115.52 Aligned_cols=82 Identities=20% Similarity=0.261 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ ++
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 67799999999999999999999997 8999999999999998888776678999999999998887664 78
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|++||+||...
T Consensus 84 d~lv~nAg~~~ 94 (255)
T 4eso_A 84 DLLHINAGVSE 94 (255)
T ss_dssp EEEEECCCCCC
T ss_pred CEEEECCCCCC
Confidence 99999998653
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.30 E-value=2.9e-12 Score=119.91 Aligned_cols=83 Identities=23% Similarity=0.318 Sum_probs=74.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+.+..+...+++|++|.++++++++ +
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999997 8999999999999888887776667889999999998888776 7
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|++|||||...
T Consensus 84 iD~lv~nAg~~~ 95 (248)
T 3op4_A 84 VDILVNNAGITR 95 (248)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 999999998653
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=2.6e-12 Score=122.60 Aligned_cols=137 Identities=12% Similarity=0.195 Sum_probs=102.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
.++||||||+||||+++++.|+++ |++|++.+|+ .+|++|.+++.++++ ++|+|||||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~------------------~~Dl~d~~~~~~~~~~~~~d~vih~A 71 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQ------------------DLDITNVLAVNKFFNEKKPNVVINCA 71 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTT------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCc------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 479999999999999999999997 7999999986 269999999999998 899999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMA 180 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a 180 (429)
+.... .++.+++++|.+.++++|.+|+...|.... ..++|. .+ ......|+.+|..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~-----~~--~~~~~~Y~~sK~~~ 144 (292)
T 1vl0_A 72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DE--VNPQSAYGKTKLEG 144 (292)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SC--CCCCSHHHHHHHHH
T ss_pred ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCC-----CC--CCCccHHHHHHHHH
Confidence 86431 235788999999888778777654432110 011111 01 01124599999999
Q ss_pred HHHHHHHHhhcCCCCeEEEEEeeecCC
Q 014177 181 AELVRVARNESKGEPERLRFSYYTAGT 207 (429)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~~~~~~G~ 207 (429)
+.+++.+. .+...+|+ .+.+|+
T Consensus 145 E~~~~~~~----~~~~~lR~-~~v~G~ 166 (292)
T 1vl0_A 145 ENFVKALN----PKYYIVRT-AWLYGD 166 (292)
T ss_dssp HHHHHHHC----SSEEEEEE-CSEESS
T ss_pred HHHHHhhC----CCeEEEee-eeeeCC
Confidence 99998653 35778888 456787
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=4.5e-11 Score=111.60 Aligned_cols=82 Identities=20% Similarity=0.296 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++.+|++|.++++++++
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 367799999999999999999999997 899999999988877666554 3468889999999999888876
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 86 ~~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 86 LGKVDILVNNAGGG 99 (255)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 899999999854
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.9e-11 Score=115.09 Aligned_cols=109 Identities=20% Similarity=0.244 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhH-cCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSK-LCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~-~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.++++|+||||+|+||+++++.|++ . |++|++.+|+.++++.+.+.+ +.++.++.+|++|.++++++++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 3568999999999999999999999 7 789999999988777665554 3468899999999999888876
Q ss_pred --CccEEEecCCCCCC-------------------CchHHHHHHHHHcC---CcEEEeCCChhH
Q 014177 108 --DVDLVVHAAGPFQQ-------------------APKCTVLEAAIETK---TAYIDVCDDTIY 147 (429)
Q Consensus 108 --~~DvVi~~agp~~~-------------------~~~~~v~~aa~~~g---v~~vdis~~~~~ 147 (429)
++|+||||||.... .+...++++++... .+.|.+++...+
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~ 143 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV 143 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence 79999999985421 12345667776652 255666665444
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=3.5e-11 Score=113.14 Aligned_cols=82 Identities=27% Similarity=0.329 Sum_probs=73.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ +
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 467799999999999999999999997 8999999999988888877776678999999999999988876 8
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 87 id~li~~Ag~~ 97 (265)
T 2o23_A 87 VDVAVNCAGIA 97 (265)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCccC
Confidence 99999999854
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.6e-12 Score=120.30 Aligned_cols=81 Identities=19% Similarity=0.279 Sum_probs=72.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+.+|++|||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ ++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 45688999999999999999999997 8999999999999999888887788999999999999888876 79
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||||..
T Consensus 104 D~lVnnAg~~ 113 (272)
T 4dyv_A 104 DVLFNNAGTG 113 (272)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999864
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.29 E-value=4.3e-12 Score=119.37 Aligned_cols=82 Identities=16% Similarity=0.288 Sum_probs=72.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.|++|++|||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478899999999999999999999997 8999999999999888877664 468899999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 81 ~g~id~lv~nAg~~ 94 (257)
T 3imf_A 81 FGRIDILINNAAGN 94 (257)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 789999999853
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=6.5e-11 Score=112.81 Aligned_cols=150 Identities=12% Similarity=0.079 Sum_probs=101.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+.++.++.++++|++|.++++++++ +
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGK 79 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 467899999999999999999999997 8999999999999998888777788999999999998877765 6
Q ss_pred ccEEEecCCCCCCCc---------hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------
Q 014177 109 VDLVVHAAGPFQQAP---------KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG--------- 170 (429)
Q Consensus 109 ~DvVi~~agp~~~~~---------~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g--------- 170 (429)
+|++|||||...... ...-++...+..+ ...+.-....+....+..|..+.+++.
T Consensus 80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~-------~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 152 (281)
T 3zv4_A 80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNV-------KGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGG 152 (281)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSC
T ss_pred CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhh-------HHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCC
Confidence 899999998643210 0111222222111 111111111111111223444433321
Q ss_pred CccchhHHHHHHHHHHHHhhcCCC
Q 014177 171 IYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
..|+.||.....+.+.+..++...
T Consensus 153 ~~Y~asKaa~~~l~~~la~e~~~~ 176 (281)
T 3zv4_A 153 PLYTATKHAVVGLVRQMAFELAPH 176 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred chhHHHHHHHHHHHHHHHHHhcCC
Confidence 128889999999999888777654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=9.3e-11 Score=110.70 Aligned_cols=82 Identities=18% Similarity=0.190 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 367899999999999999999999997 899999999998877665544 3568889999999998888776
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 88 ~~~g~id~lv~nAg~~ 103 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIE 103 (267)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 689999999854
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=7.2e-12 Score=115.89 Aligned_cols=81 Identities=21% Similarity=0.303 Sum_probs=70.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 3689999999999999999999997 899999999998887766544 3578899999999999998887
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 7899999998643
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.4e-11 Score=115.68 Aligned_cols=82 Identities=27% Similarity=0.355 Sum_probs=70.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---C---CcEEEEeeCCChHHHHHHhc-
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---K---NSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~---~v~~~~~Dl~d~~~l~~~~~- 107 (429)
.++++|+++||||+|+||+++++.|+++ |++|++.+|+.+++++..+++. . ++.++++|++|.++++++++
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 3467899999999999999999999997 8999999999988887766653 1 57889999999998888775
Q ss_pred ------CccEEEecCCC
Q 014177 108 ------DVDLVVHAAGP 118 (429)
Q Consensus 108 ------~~DvVi~~agp 118 (429)
++|+||||||.
T Consensus 85 ~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 68999999986
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=6.5e-12 Score=117.91 Aligned_cols=82 Identities=22% Similarity=0.316 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ +
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 367789999999999999999999997 8999999999988888777665567889999999998888776 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 80 iD~lv~nAg~~ 90 (254)
T 1hdc_A 80 VDGLVNNAGIS 90 (254)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999854
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-11 Score=114.76 Aligned_cols=80 Identities=16% Similarity=0.330 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+ .++++.+.+++ +.++.++++|++|.++++++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 66789999999999999999999997 8999999998 77777666554 3468899999999999988887
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||+||.
T Consensus 83 ~g~id~vi~~Ag~ 95 (258)
T 3afn_B 83 FGGIDVLINNAGG 95 (258)
T ss_dssp HSSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 79999999985
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.2e-12 Score=118.04 Aligned_cols=79 Identities=15% Similarity=0.230 Sum_probs=70.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCc----cEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDV----DLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~----DvVi~ 114 (429)
||+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++.+|++|.++++++++.+ |+|||
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 578999999999999999999997 899999999999999988887777899999999999999988754 99999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
+||..
T Consensus 79 ~Ag~~ 83 (230)
T 3guy_A 79 SAGSG 83 (230)
T ss_dssp CCCCC
T ss_pred eCCcC
Confidence 99854
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.2e-12 Score=121.72 Aligned_cols=83 Identities=17% Similarity=0.274 Sum_probs=74.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ +
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999997 8999999999999998888887788999999999998887765 7
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|+||||||...
T Consensus 104 iD~lvnnAg~~~ 115 (277)
T 3gvc_A 104 VDKLVANAGVVH 115 (277)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 899999998653
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.29 E-value=8.3e-12 Score=117.09 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=73.5
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++++|.++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|+++++++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3588999999999999999999999997 8999999999999888877653 568899999999999888765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 81 ~~G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIM 95 (254)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCccc
Confidence 799999999854
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=5.1e-12 Score=119.22 Aligned_cols=83 Identities=20% Similarity=0.279 Sum_probs=72.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999997 8999999999998887766553 468899999999998888776
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 85 ~~g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFP 100 (262)
T ss_dssp HHSCCSEEEECCCCCC
T ss_pred HhCCCCEEEECCCCCC
Confidence 7999999998643
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-11 Score=114.22 Aligned_cols=82 Identities=20% Similarity=0.235 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC--ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD--LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g--~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
|++++|+||||+|+||+++++.|+++ | ++|++.+|+.++++.+.+....++.++++|++|.++++++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~--g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhc--CCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence 45689999999999999999999997 7 899999999988777654313468899999999998888876
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 79 ~~~id~li~~Ag~~~ 93 (250)
T 1yo6_A 79 SDGLSLLINNAGVLL 93 (250)
T ss_dssp GGCCCEEEECCCCCC
T ss_pred CCCCcEEEECCcccC
Confidence 7999999998654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=6.6e-12 Score=118.17 Aligned_cols=82 Identities=18% Similarity=0.263 Sum_probs=70.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHh------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMAL------ 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~------ 106 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.+++++++
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 367799999999999999999999997 899999999998877766554 345788999999999888877
Q ss_pred --cCccEEEecCCCC
Q 014177 107 --RDVDLVVHAAGPF 119 (429)
Q Consensus 107 --~~~DvVi~~agp~ 119 (429)
.++|+|||+||..
T Consensus 84 ~~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 84 FHGKLNILVNNAGIV 98 (260)
T ss_dssp TTTCCCEEEECCCCC
T ss_pred cCCCCCEEEECCCCC
Confidence 4799999999854
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.6e-11 Score=119.46 Aligned_cols=146 Identities=12% Similarity=0.021 Sum_probs=107.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH--HHHHHHhCCCcEEEEee-CCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG--AAMVSTLGKNSEFAEVN-IYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~--~~l~~~l~~~v~~~~~D-l~d~~~l~~~~~~~DvVi 113 (429)
+.+|+|+||||+|++|+++++.|+++ +++|++.+|+.++. +.+.. ..+++++++| ++|.+++.++++++|+||
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi 78 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQA--IPNVTLFQGPLLNNVPLMDTLFEGAHLAF 78 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHT--STTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHhh--cCCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence 34578999999999999999999997 78999999988765 33322 1368899999 999999999999999999
Q ss_pred ecCCCCCC---CchHHHHHHHHHcC-C-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 114 HAAGPFQQ---APKCTVLEAAIETK-T-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 114 ~~agp~~~---~~~~~v~~aa~~~g-v-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
|+++.... ....+++++|.+.| + ++|.+|+.... .+ +. .....|+.+|..++.+++.
T Consensus 79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~-----~~-------~~----~~~~~y~~sK~~~E~~~~~-- 140 (352)
T 1xgk_A 79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHS-----LY-------GP----WPAVPMWAPKFTVENYVRQ-- 140 (352)
T ss_dssp ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGG-----GT-------SS----CCCCTTTHHHHHHHHHHHT--
T ss_pred EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcccc-----cc-------CC----CCCccHHHHHHHHHHHHHH--
Confidence 99876421 12378899999999 7 45666654310 00 11 1124588999999988863
Q ss_pred hhcCCCCeEEEEEeeecCCC
Q 014177 189 NESKGEPERLRFSYYTAGTG 208 (429)
Q Consensus 189 ~~~~~~v~~i~~~~~~~G~~ 208 (429)
.+.++..+|.. .+|++
T Consensus 141 --~gi~~~ivrpg--~~g~~ 156 (352)
T 1xgk_A 141 --LGLPSTFVYAG--IYNNN 156 (352)
T ss_dssp --SSSCEEEEEEC--EEGGG
T ss_pred --cCCCEEEEecc--eecCC
Confidence 46677777753 35554
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.28 E-value=6.8e-12 Score=119.56 Aligned_cols=100 Identities=19% Similarity=0.202 Sum_probs=82.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+||||+|++|+++++.|.+. ++++|++.+|++++...+. ..+++++++|++|.+++.++++++|+||||+++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~---~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDW---RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGG---BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhh---hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 47999999999999999999874 4789999999988755432 2478999999999999999999999999999875
Q ss_pred CC-----CchHHHHHHHHHcCCcE-EEeCC
Q 014177 120 QQ-----APKCTVLEAAIETKTAY-IDVCD 143 (429)
Q Consensus 120 ~~-----~~~~~v~~aa~~~gv~~-vdis~ 143 (429)
.. .++.+++++|.+.|++. |.+|+
T Consensus 77 ~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 77 HPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 43 23468899999999865 44543
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.3e-12 Score=119.37 Aligned_cols=82 Identities=16% Similarity=0.180 Sum_probs=71.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCc-EEEEeeCCChHHHHHHh------cC
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS-EFAEVNIYNEGSLLMAL------RD 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v-~~~~~Dl~d~~~l~~~~------~~ 108 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.++++.++ .++++|++|.+++++++ .+
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAP 85 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCC
Confidence 366789999999999999999999997 8999999999988887777665456 88999999999888876 47
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 86 id~li~~Ag~~ 96 (254)
T 2wsb_A 86 VSILVNSAGIA 96 (254)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCccC
Confidence 89999999854
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-12 Score=122.66 Aligned_cols=82 Identities=21% Similarity=0.350 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ +
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 367899999999999999999999997 8999999999998888877776678899999999998887765 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 81 id~lv~~Ag~~ 91 (253)
T 1hxh_A 81 LNVLVNNAGIL 91 (253)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 79999999864
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.5e-12 Score=121.88 Aligned_cols=153 Identities=12% Similarity=0.098 Sum_probs=104.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
.+++|.+|||||++.||+++++.|++. |++|++.+|+.+++++..++++.++..+++|++|.++++++++ +
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 367899999999999999999999998 8999999999999999999998888999999999998887765 6
Q ss_pred ccEEEecCCCCCCC----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------Cccch
Q 014177 109 VDLVVHAAGPFQQA----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG---------IYPGV 175 (429)
Q Consensus 109 ~DvVi~~agp~~~~----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g---------~~pG~ 175 (429)
+|++||+||..... -+..-++..++... ...++.....+. ..++.|..+.+++. ..|+.
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl-------~g~~~~~~~~~p-~m~~~G~IInisS~~~~~~~~~~~~Y~a 175 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNV-------KGVLFTVQKALP-LLARGSSVVLTGSTAGSTGTPAFSVYAA 175 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHT-------HHHHHHHHHHTT-TEEEEEEEEEECCGGGGSCCTTCHHHHH
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHHHHh-------HHHHHHHHHHHH-HHhhCCeEEEEeehhhccCCCCchHHHH
Confidence 89999999854321 01222333322211 111111111110 01223433333321 12888
Q ss_pred hHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 176 SNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
||.....+.+.+..++... .||+
T Consensus 176 sKaav~~ltr~lA~Ela~~--gIrV 198 (273)
T 4fgs_A 176 SKAALRSFARNWILDLKDR--GIRI 198 (273)
T ss_dssp HHHHHHHHHHHHHHHTTTS--CEEE
T ss_pred HHHHHHHHHHHHHHHhccc--CeEE
Confidence 9988888888887776644 3444
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=2.1e-12 Score=117.28 Aligned_cols=137 Identities=15% Similarity=0.059 Sum_probs=101.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc--eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL--QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~--~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|+|+|+||+|++|+++++.|+++ ++ +|++.+|++++ ...+++++.+|++|.+++.+++ +|+||||
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~--g~~~~V~~~~r~~~~-------~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~ 72 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALA-------EHPRLDNPVGPLAELLPQLDGS--IDTAFCC 72 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCC-------CCTTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhC--CCCCeEEEEeCCCcc-------cCCCceEEeccccCHHHHHHhh--hcEEEEC
Confidence 4579999999999999999999997 66 99999998775 1246788899999988888777 9999999
Q ss_pred CCCCCC-------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 116 AGPFQQ-------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 116 agp~~~-------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
+|.... .+..+++++|.+.++. +|.+++...+. .....|+.+|..++
T Consensus 73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~-------------------~~~~~y~~sK~~~e 133 (215)
T 2a35_A 73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------------------KSSIFYNRVKGELE 133 (215)
T ss_dssp CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------------TCSSHHHHHHHHHH
T ss_pred eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC-------------------CCccHHHHHHHHHH
Confidence 986431 1346778888888875 45666543321 01235888998888
Q ss_pred HHHHHHHhhcCCC-CeEEEEEeeecCCCC
Q 014177 182 ELVRVARNESKGE-PERLRFSYYTAGTGG 209 (429)
Q Consensus 182 ~~~~~~~~~~~~~-v~~i~~~~~~~G~~~ 209 (429)
.+++ +.+.+ +..+|.. ..+|+..
T Consensus 134 ~~~~----~~~~~~~~~vrp~-~v~g~~~ 157 (215)
T 2a35_A 134 QALQ----EQGWPQLTIARPS-LLFGPRE 157 (215)
T ss_dssp HHHT----TSCCSEEEEEECC-SEESTTS
T ss_pred HHHH----HcCCCeEEEEeCc-eeeCCCC
Confidence 8875 34556 7777773 4566654
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.28 E-value=5.3e-12 Score=118.84 Aligned_cols=82 Identities=22% Similarity=0.293 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----C-CcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----K-NSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~-~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. . ++.++++|++|.++++++++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR 81 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 366789999999999999999999997 8999999999988777665542 2 68889999999999888876
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~~gid~lv~~Ag~~ 96 (260)
T 2z1n_A 82 DLGGADILVYSTGGP 96 (260)
T ss_dssp HTTCCSEEEECCCCC
T ss_pred HhcCCCEEEECCCCC
Confidence 599999999853
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.28 E-value=6.1e-12 Score=118.03 Aligned_cols=83 Identities=24% Similarity=0.355 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 367799999999999999999999997 899999999999888877665 3468899999999999988876
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 82 g~id~lv~nAg~~~ 95 (252)
T 3h7a_A 82 APLEVTIFNVGANV 95 (252)
T ss_dssp SCEEEEEECCCCCC
T ss_pred CCceEEEECCCcCC
Confidence 6899999998643
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.28 E-value=8.5e-12 Score=117.09 Aligned_cols=147 Identities=15% Similarity=0.105 Sum_probs=98.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
|+|+++||||+|+||+++++.|++++.++.|++.+|+.++++++.+.++.++.++++|++|.++++++++ ++|
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 80 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID 80 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence 3589999999999999999999997556899999999999988888776678999999999998888776 789
Q ss_pred EEEecCCCCCCC-----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------Cccchh
Q 014177 111 LVVHAAGPFQQA-----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG---------IYPGVS 176 (429)
Q Consensus 111 vVi~~agp~~~~-----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g---------~~pG~s 176 (429)
++||+||..... -+..-++...+..+ ...+.-....+....+..|..+.+++. ..|+.|
T Consensus 81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~-------~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~as 153 (254)
T 3kzv_A 81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINF-------FSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSS 153 (254)
T ss_dssp EEEEECCCCCCCTTTTSCCHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHH
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHhh-------HHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHH
Confidence 999999864320 01122222222211 111111111111111223444444332 138889
Q ss_pred HHHHHHHHHHHHhhc
Q 014177 177 NVMAAELVRVARNES 191 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~ 191 (429)
|.....+++.+..++
T Consensus 154 K~a~~~~~~~la~e~ 168 (254)
T 3kzv_A 154 KAALNHFAMTLANEE 168 (254)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999998888765
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.9e-11 Score=113.40 Aligned_cols=81 Identities=23% Similarity=0.281 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999997 899999999998877766554 3568889999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 98 g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 98 GPVDVLVNNAGRP 110 (277)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 699999999854
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=9.9e-12 Score=117.79 Aligned_cols=82 Identities=22% Similarity=0.274 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999997 899999999988877766554 3468899999999998887765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 106 ~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 106 IGDVSILVNNAGVV 119 (272)
T ss_dssp TCCCSEEEECCCCC
T ss_pred CCCCcEEEECCCcC
Confidence 789999999864
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=9.6e-11 Score=110.11 Aligned_cols=82 Identities=24% Similarity=0.209 Sum_probs=70.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++..+++|++|.++++++++
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999997 899999999988877665544 3467889999999998887765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 89 ~g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 89 HGGVDILVSNAAVN 102 (260)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 799999999853
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=113.56 Aligned_cols=82 Identities=15% Similarity=0.229 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH----hCCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST----LGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++.....++ .+.++.++++|++|.++++++++
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 88 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence 467789999999999999999999997 89999999976655443332 34578899999999998887765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 89 ~~~~id~li~~Ag~~ 103 (265)
T 1h5q_A 89 DLGPISGLIANAGVS 103 (265)
T ss_dssp HSCSEEEEEECCCCC
T ss_pred hcCCCCEEEECCCcC
Confidence 489999999864
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.3e-11 Score=113.41 Aligned_cols=82 Identities=17% Similarity=0.282 Sum_probs=71.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+. .++.++++|++|.++++++++
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 477899999999999999999999997 8999999999988877766664 468899999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 81 ~~id~li~~Ag~~ 93 (251)
T 1zk4_A 81 GPVSTLVNNAGIA 93 (251)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 489999999854
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-11 Score=119.55 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++|+||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 56789999999999999999999998 8999999999998887776553 468899999999999888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 107 g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 GGVDVVFSNAGIV 119 (301)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 789999999864
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-10 Score=107.88 Aligned_cols=83 Identities=20% Similarity=0.280 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 477899999999999999999999998 899999999998888776654 3578899999999998888776
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 87 ~g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 87 FGKITVLVNNAGGGG 101 (256)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 7999999998643
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=4.2e-12 Score=124.84 Aligned_cols=154 Identities=15% Similarity=0.091 Sum_probs=105.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCC-----ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC---ccE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPD-----LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD---VDL 111 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g-----~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~---~Dv 111 (429)
|+|+||||+||+|+++++.|+++ + ++|++.+|+..+.. ....+++++.+|++|.+++.+++++ +|+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~ 75 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAW----HEDNPINYVQCDISDPDDSQAKLSPLTDVTH 75 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSC----CCSSCCEEEECCTTSHHHHHHHHTTCTTCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccc----cccCceEEEEeecCCHHHHHHHHhcCCCCCE
Confidence 68999999999999999999987 6 89999999876532 0124688999999999999999997 999
Q ss_pred EEecCCCCCC----------CchHHHHHHHHHc--CCcEEE--------eCCChhHHHHH---HhhHHHHHHcCCcEEec
Q 014177 112 VVHAAGPFQQ----------APKCTVLEAAIET--KTAYID--------VCDDTIYSQRA---KSFKDRAIAANIPAITT 168 (429)
Q Consensus 112 Vi~~agp~~~----------~~~~~v~~aa~~~--gv~~vd--------is~~~~~~~~~---~~~~~~a~~~g~~~i~~ 168 (429)
|||||+.... .++.+++++|.+. +++.+. +|+...|.... ..++|. .+..+
T Consensus 76 vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~-----~~~~~- 149 (364)
T 2v6g_A 76 VFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTED-----LPRLK- 149 (364)
T ss_dssp EEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTT-----SCCCS-
T ss_pred EEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcc-----ccCCc-
Confidence 9999986532 2457889999987 777663 33332221100 011111 00000
Q ss_pred CCCccchhHHHHHHHHHHHHhhcC-CCCeEEEEEeeecCCCCC
Q 014177 169 GGIYPGVSNVMAAELVRVARNESK-GEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~-~~v~~i~~~~~~~G~~~~ 210 (429)
....| ..++.++..+.++++ .++..+|. ...+|++..
T Consensus 150 ~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp-~~v~G~~~~ 187 (364)
T 2v6g_A 150 YMNFY----YDLEDIMLEEVEKKEGLTWSVHRP-GNIFGFSPY 187 (364)
T ss_dssp SCCHH----HHHHHHHHHHHTTSTTCEEEEEEE-SSEECCCTT
T ss_pred cchhh----HHHHHHHHHHhhcCCCceEEEECC-CceeCCCCC
Confidence 01112 456777777765555 67888898 567888754
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=112.47 Aligned_cols=82 Identities=21% Similarity=0.287 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++++++||||+|+||+++++.|+++ |++|++. +|+.++++.+.+.+ +.++.++++|++|.++++++++
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 366789999999999999999999997 8899998 67777766655443 3568899999999998888776
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 80 ~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 80 AFGRIDILVNNAGIT 94 (247)
T ss_dssp HHSCCCEEEECC---
T ss_pred hcCCCCEEEECCCCC
Confidence 799999999864
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-11 Score=115.85 Aligned_cols=82 Identities=16% Similarity=0.304 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+. +++++..+..+.++.++++|++|.++++++++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 367789999999999999999999997 89999999998 77665444445578899999999998887754
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~id~lv~nAg~~ 93 (249)
T 2ew8_A 82 RCDILVNNAGIY 93 (249)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 799999999854
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.6e-10 Score=110.73 Aligned_cols=140 Identities=14% Similarity=0.151 Sum_probs=95.8
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH-HHHHH---HhCCCcEEEEeeCCChHHHHHHhc--
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG-AAMVS---TLGKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~-~~l~~---~l~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
..++++|++|||||+|+||+++++.|+++ |++|++.+|+.++. +.+.+ ..+.++.++++|++|.++++++++
T Consensus 42 ~~~l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 34578899999999999999999999997 89999999987643 22222 233568899999999998888775
Q ss_pred -----CccEEEecCCCCCC--------------------CchHHHHHHHHHc---CCcEEEeCCChhHHHHHHhhHHHHH
Q 014177 108 -----DVDLVVHAAGPFQQ--------------------APKCTVLEAAIET---KTAYIDVCDDTIYSQRAKSFKDRAI 159 (429)
Q Consensus 108 -----~~DvVi~~agp~~~--------------------~~~~~v~~aa~~~---gv~~vdis~~~~~~~~~~~~~~~a~ 159 (429)
++|++||+||.... .+...+.+++... +-..|.+++...+..
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------- 189 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG---------- 189 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC----------
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC----------
Confidence 78999999985421 1223444444432 123344443322210
Q ss_pred HcCCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 160 AANIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 160 ~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
.+ ....|+.||.....+++.+..++.
T Consensus 190 ---~~----~~~~Y~asKaa~~~l~~~la~e~~ 215 (291)
T 3ijr_A 190 ---NE----TLIDYSATKGAIVAFTRSLSQSLV 215 (291)
T ss_dssp ---CT----TCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred ---CC----CChhHHHHHHHHHHHHHHHHHHHh
Confidence 00 012389999999988888876653
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-10 Score=109.85 Aligned_cols=87 Identities=14% Similarity=0.194 Sum_probs=70.0
Q ss_pred CCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc
Q 014177 30 GAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 30 ~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~ 107 (429)
+.....+|+ |+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++.. ++.++++|++|.++++++++
T Consensus 13 ~~~~~~~~~-k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 89 (272)
T 2nwq_A 13 LVPRGSHMS-STLFITGATSGFGEACARRFAEA--GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVD 89 (272)
T ss_dssp --------C-CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH
T ss_pred ccccCCCcC-cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 333445566 89999999999999999999997 89999999999988888776653 68889999999999988876
Q ss_pred C-------ccEEEecCCCC
Q 014177 108 D-------VDLVVHAAGPF 119 (429)
Q Consensus 108 ~-------~DvVi~~agp~ 119 (429)
. +|+|||+||..
T Consensus 90 ~~~~~~g~iD~lvnnAG~~ 108 (272)
T 2nwq_A 90 NLPEEFATLRGLINNAGLA 108 (272)
T ss_dssp TCCGGGSSCCEEEECCCCC
T ss_pred HHHHHhCCCCEEEECCCCC
Confidence 4 59999999864
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.26 E-value=6.7e-12 Score=119.07 Aligned_cols=83 Identities=23% Similarity=0.374 Sum_probs=72.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.++++|++|||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999997 899999999999888777665 3568899999999999888876
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 100 ~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQ 114 (271)
T ss_dssp HTCCCCEEEECCCCC
T ss_pred HCCCCCEEEECCCCC
Confidence 799999999864
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=4.8e-11 Score=114.65 Aligned_cols=82 Identities=21% Similarity=0.280 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--------CCCcEEEEeeCCChHHHHHHhc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--------GKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--------~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
.+++++|+||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 477899999999999999999999997 899999999988877666543 3468899999999998888776
Q ss_pred -------CccEEEecCCCC
Q 014177 108 -------DVDLVVHAAGPF 119 (429)
Q Consensus 108 -------~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 93 ~~~~~~g~id~li~~Ag~~ 111 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQ 111 (303)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 599999999853
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.26 E-value=7.1e-12 Score=118.51 Aligned_cols=82 Identities=20% Similarity=0.366 Sum_probs=71.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999997 899999999999888877665 3467889999999998888765
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 80 g~iD~lVnnAG~~~ 93 (264)
T 3tfo_A 80 GRIDVLVNNAGVMP 93 (264)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 7999999998653
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.1e-11 Score=117.98 Aligned_cols=82 Identities=18% Similarity=0.282 Sum_probs=69.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|++|||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999997 899999999999888776665 3468899999999998887765
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 100 g~id~lv~nAg~~~ 113 (279)
T 3sju_A 100 GPIGILVNSAGRNG 113 (279)
T ss_dssp CSCCEEEECCCCCC
T ss_pred CCCcEEEECCCCCC
Confidence 6899999998653
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-11 Score=114.51 Aligned_cols=81 Identities=22% Similarity=0.336 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.++++++||||+|+||+++++.|+++ |++|++. +|+.++++.+.+.+ +.++.++++|++|.++++++++
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 34678999999999999999999997 8899776 77777777665544 3468899999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 102 ~g~id~li~nAg~~ 115 (272)
T 4e3z_A 102 FGRLDGLVNNAGIV 115 (272)
T ss_dssp HSCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 689999999864
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=4.2e-11 Score=113.06 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++..++.++++|++|.++++++++ ++
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 66789999999999999999999997 8999999999998888877776678899999999998888765 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||+||..
T Consensus 82 D~lvnnAg~~ 91 (263)
T 2a4k_A 82 HGVAHFAGVA 91 (263)
T ss_dssp CEEEEGGGGT
T ss_pred cEEEECCCCC
Confidence 9999999854
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=9.5e-11 Score=111.76 Aligned_cols=83 Identities=22% Similarity=0.268 Sum_probs=70.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
..+++++|+||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+ +.++.++.+|++|.++++++++
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 3466789999999999999999999997 899999999988877766554 3467889999999999888774
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 118 ~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 118 EHKNVDILVNNAGIT 132 (285)
T ss_dssp HCSCCCEEEECCCCC
T ss_pred hcCCCCEEEECCCCC
Confidence 689999999854
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.25 E-value=7.1e-12 Score=117.60 Aligned_cols=83 Identities=19% Similarity=0.208 Sum_probs=72.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|.++||||++.||+++++.|++. |++|++.+|+.+++++..+++. .++..+++|++|+++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999998 8999999999998887776653 468889999999998887765
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 84 ~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 84 GIHVDILINNAGIQY 98 (255)
T ss_dssp TCCCCEEEECCCCCC
T ss_pred CCCCcEEEECCCCCC
Confidence 6899999998654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.5e-11 Score=116.59 Aligned_cols=81 Identities=21% Similarity=0.339 Sum_probs=71.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. ++.++++|++|.++++++++ +
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 367899999999999999999999997 8999999999998888777664 57889999999998888775 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 83 iD~lv~nAg~~ 93 (270)
T 1yde_A 83 LDCVVNNAGHH 93 (270)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999999854
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=3.8e-11 Score=114.35 Aligned_cols=149 Identities=18% Similarity=0.148 Sum_probs=100.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC------------chhHHHHHHHh---CCCcEEEEeeCCChH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN------------REKGAAMVSTL---GKNSEFAEVNIYNEG 100 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~------------~~~~~~l~~~l---~~~v~~~~~Dl~d~~ 100 (429)
++++|++|||||+|+||+++++.|+++ |++|++.+|+ .+++++....+ +.++.++++|++|.+
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence 467899999999999999999999998 8999999987 44455444332 357889999999999
Q ss_pred HHHHHhc-------CccEEEecCCCCCC-----------------CchHHHHHHHHHc---CCcEEEeCCChhHHHHHHh
Q 014177 101 SLLMALR-------DVDLVVHAAGPFQQ-----------------APKCTVLEAAIET---KTAYIDVCDDTIYSQRAKS 153 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~~~-----------------~~~~~v~~aa~~~---gv~~vdis~~~~~~~~~~~ 153 (429)
+++++++ ++|+||||||.... .+...+.+++... +...|.+++...+......
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 164 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP 164 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc
Confidence 8888776 79999999986431 1234556666553 2345666654433322110
Q ss_pred hHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 154 FKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 154 ~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
.... . .. ......|+.||.....+++.+..++.
T Consensus 165 ~~~~--~--~~--~~~~~~Y~asK~a~~~~~~~la~e~~ 197 (287)
T 3pxx_A 165 PGAG--G--PQ--GPGGAGYSYAKQLVDSYTLQLAAQLA 197 (287)
T ss_dssp C---------C--HHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred cccc--c--cC--CCccchHHHHHHHHHHHHHHHHHHHh
Confidence 0000 0 00 00113489999999998888877653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-11 Score=115.32 Aligned_cols=86 Identities=17% Similarity=0.211 Sum_probs=68.0
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCC---ceEEEEecCchhHHHHHHH--hCCCcEEEEeeCCChHHHHHHhc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPD---LQIVVGSRNREKGAAMVST--LGKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g---~~v~v~~R~~~~~~~l~~~--l~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
....+++++|+||||+|+||+++++.|+++ + ++|++.+|+.++++.+.+. ...++.++.+|++|.++++++++
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~--G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNL--PQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTS--SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhc--CCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHH
Confidence 344577899999999999999999999997 6 8999999998765544321 13478899999999998888876
Q ss_pred ---------CccEEEecCCCCC
Q 014177 108 ---------DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---------~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 93 ~~~~~~g~~~id~li~~Ag~~~ 114 (267)
T 1sny_A 93 DIEGVTKDQGLNVLFNNAGIAP 114 (267)
T ss_dssp HHHHHHGGGCCSEEEECCCCCC
T ss_pred HHHHhcCCCCccEEEECCCcCC
Confidence 7999999998643
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-10 Score=110.58 Aligned_cols=84 Identities=24% Similarity=0.230 Sum_probs=70.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC------------chhHHHHHHH---hCCCcEEEEeeCCCh
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN------------REKGAAMVST---LGKNSEFAEVNIYNE 99 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~------------~~~~~~l~~~---l~~~v~~~~~Dl~d~ 99 (429)
.++.+|++|||||+|+||+++++.|+++ |++|++.+|+ .++++...+. .+.++.++++|++|.
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 3478899999999999999999999997 8999999987 5555544433 345789999999999
Q ss_pred HHHHHHhc-------CccEEEecCCCCC
Q 014177 100 GSLLMALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l~~~~~-------~~DvVi~~agp~~ 120 (429)
++++++++ ++|+||||||...
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 99888876 7999999998654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.6e-11 Score=114.49 Aligned_cols=83 Identities=19% Similarity=0.222 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++.++++|++|.++++++++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999997 899999999998887776654 3568899999999998888775
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 80 ~~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 80 NLAIDILVNNAGITR 94 (247)
T ss_dssp TCCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 5799999998653
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=118.28 Aligned_cols=83 Identities=18% Similarity=0.242 Sum_probs=70.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-------------CchhHHHHHHHh---CCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-------------NREKGAAMVSTL---GKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-------------~~~~~~~l~~~l---~~~v~~~~~Dl~d~ 99 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+| +.++++++.+.+ +.++.++++|++|.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD 89 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 477899999999999999999999997 899999998 566666665543 34688999999999
Q ss_pred HHHHHHhc-------CccEEEecCCCCC
Q 014177 100 GSLLMALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l~~~~~-------~~DvVi~~agp~~ 120 (429)
++++++++ ++|++||+||...
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 99888775 7999999998653
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-10 Score=109.84 Aligned_cols=81 Identities=22% Similarity=0.274 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+++++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999997 8999999999998888877764 468899999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 104 g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 104 GHLDIVVANAGIN 116 (283)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 799999999864
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.2e-11 Score=115.74 Aligned_cols=82 Identities=16% Similarity=0.253 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++|+++||||+|+||+++++.|+++ |++|++.+|+.+++++..+++ +.++.++++|++|.++++++++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 477899999999999999999999997 899999999988877665544 4578899999999998888775
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 102 ~~g~id~lv~nAg~~ 116 (277)
T 4fc7_A 102 EFGRIDILINCAAGN 116 (277)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCcCC
Confidence 799999999854
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-11 Score=116.84 Aligned_cols=83 Identities=20% Similarity=0.309 Sum_probs=71.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++.+|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999997 899999999998887766543 4578999999999998887765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 95 ~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 95 AFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHTSCSEEEEECCCCC
T ss_pred HcCCCCEEEECCCcCC
Confidence 7999999998653
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.5e-11 Score=118.02 Aligned_cols=83 Identities=27% Similarity=0.378 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999997 8999999999999888877764 367889999999998877765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 116 ~~g~iD~lvnnAg~~~ 131 (293)
T 3rih_A 116 AFGALDVVCANAGIFP 131 (293)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HcCCCCEEEECCCCCC
Confidence 6899999998653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-10 Score=111.03 Aligned_cols=82 Identities=20% Similarity=0.273 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. +++.++++|++|.++++++++
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 356789999999999999999999997 8999999999988887776664 257888999999998887775
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 104 g~iD~lvnnAg~~ 116 (276)
T 2b4q_A 104 ARLDILVNNAGTS 116 (276)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 799999999854
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=5.1e-11 Score=110.61 Aligned_cols=79 Identities=16% Similarity=0.220 Sum_probs=68.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-------eEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-------QIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-------~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+|+|+||||+|+||+++++.|+++ |+ +|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh--cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 478999999999999999999998 77 8999999988887776655 3457889999999998888776
Q ss_pred ------CccEEEecCCCC
Q 014177 108 ------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ------~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 80 ~~~~~g~id~li~~Ag~~ 97 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVG 97 (244)
T ss_dssp HHHHTSCCSEEEECCCCC
T ss_pred HHHhCCCCCEEEEcCCcC
Confidence 699999999854
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.6e-11 Score=115.15 Aligned_cols=79 Identities=22% Similarity=0.360 Sum_probs=68.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999997 899999999998877766554 3468889999999998888876 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 80 id~lv~nAg~~ 90 (256)
T 1geg_A 80 FDVIVNNAGVA 90 (256)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999854
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=7.6e-11 Score=110.65 Aligned_cols=78 Identities=22% Similarity=0.314 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++ +++.+++. + .++++|++|.++++++++ ++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 66789999999999999999999997 8999999999887 66666664 4 789999999988887765 68
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||+||..
T Consensus 79 D~lv~~Ag~~ 88 (256)
T 2d1y_A 79 DVLVNNAAIA 88 (256)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999854
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-11 Score=115.91 Aligned_cols=81 Identities=19% Similarity=0.227 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++ ++.+.+++ +.++.++++|++|.++++++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 56789999999999999999999997 8999999999887 77665544 4567889999999998888775
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 80 ~~g~iD~lv~~Ag~~ 94 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQ 94 (260)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred hcCCCCEEEECCCCC
Confidence 799999999854
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=7e-11 Score=110.58 Aligned_cols=82 Identities=22% Similarity=0.274 Sum_probs=66.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCc--hhHHHHHHHhC-CCcEEEEeeCCCh-HHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNR--EKGAAMVSTLG-KNSEFAEVNIYNE-GSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~--~~~~~l~~~l~-~~v~~~~~Dl~d~-~~l~~~~~--- 107 (429)
++++|+++||||+|+||+++++.|+++ |++ |++.+|+. +.++++.+..+ .++.++.+|++|. ++++++++
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence 367789999999999999999999997 786 89999986 34555554432 3578899999998 77777665
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 80 ~~~g~id~lv~~Ag~~ 95 (254)
T 1sby_A 80 DQLKTVDILINGAGIL 95 (254)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCccC
Confidence 799999999864
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.8e-11 Score=116.69 Aligned_cols=84 Identities=14% Similarity=0.178 Sum_probs=70.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc--
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.++++|++|||||+|+||+++++.|+++ |++|++.+| +.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 3467789999999999999999999998 899999999 566666665544 3468889999999998888776
Q ss_pred -----CccEEEecCCCCC
Q 014177 108 -----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -----~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 99 ~~~~g~iD~lv~nAg~~~ 116 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQF 116 (281)
T ss_dssp HHHTSSCSEEEECCCCCC
T ss_pred HHHCCCCCEEEECCCCCC
Confidence 7899999998643
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.23 E-value=9.6e-11 Score=110.39 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|++|||||+|+||+++++.|+++ |++|++.+|+.+++.+..... ++.++++|++|.++++++++ +
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEH--GHRVIISYRTEHASVTELRQA--GAVALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHHHHHHHHH--TCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhc--CCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 356789999999999999999999997 899999999988765544444 37899999999998888775 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|+|||+||...
T Consensus 100 iD~lv~nAg~~~ 111 (260)
T 3gem_A 100 LRAVVHNASEWL 111 (260)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCCccC
Confidence 899999998653
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=115.83 Aligned_cols=82 Identities=20% Similarity=0.265 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHh------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMAL------ 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~------ 106 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.+++++++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999997 899999999998877766554 346888999999999888776
Q ss_pred --cCccEEEecCCCC
Q 014177 107 --RDVDLVVHAAGPF 119 (429)
Q Consensus 107 --~~~DvVi~~agp~ 119 (429)
.++|+|||+||..
T Consensus 96 ~~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 96 FDGKLNILVNNAGVV 110 (273)
T ss_dssp TTSCCCEEEECCCCC
T ss_pred cCCCCcEEEECCCCC
Confidence 5799999999864
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-10 Score=109.45 Aligned_cols=83 Identities=17% Similarity=0.183 Sum_probs=71.3
Q ss_pred CCCCCeEEEEcCCh-HHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTG-RVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G-~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+++++++||||+| .||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 46789999999987 5999999999997 8999999999988887776652 468999999999998888775
Q ss_pred ----CccEEEecCCCCC
Q 014177 108 ----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ----~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 97 ~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCCcEEEECCCcCC
Confidence 6899999998643
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-11 Score=120.65 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---C--CcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---K--NSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~--~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++.+++||||||+|+||+++++.|+++ |++|++.+|+.++++++.+.+. . ++.++++|++|.++++++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 366789999999999999999999997 8999999999998887766542 2 68889999999998888775
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 83 ~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHTCCEEEEEECCCCC
T ss_pred HhCCCCCEEEECCCcC
Confidence 679999999854
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.7e-10 Score=105.12 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=69.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Ccc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~D 110 (429)
++++|+||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++. ++.++++|++|.++++++++ ++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEKRLQALAAELE-GALPLPGDVREEGDWARAVAAMEEAFGELS 80 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999999999999999999997 8999999999988888777664 68899999999998887765 789
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+|||+||..
T Consensus 81 ~li~~Ag~~ 89 (234)
T 2ehd_A 81 ALVNNAGVG 89 (234)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCcC
Confidence 999999854
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-10 Score=110.07 Aligned_cols=80 Identities=23% Similarity=0.318 Sum_probs=67.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+| +.++++++.+++ +.++.++++|++|.++++++++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999997 899999985 667666665544 3568899999999998888776
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||+||.
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 79999999986
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.6e-10 Score=106.38 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+ +.++.++++|++|.++++++++
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999998 899999999987766554433 4568899999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 109 ~g~id~li~~Ag~~ 122 (279)
T 3ctm_A 109 FGTIDVFVANAGVT 122 (279)
T ss_dssp HSCCSEEEECGGGS
T ss_pred hCCCCEEEECCccc
Confidence 489999999854
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.3e-11 Score=117.03 Aligned_cols=82 Identities=13% Similarity=0.226 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+.+ +.++..+++|++|.++++++++
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 467789999999999999999999997 899999999998887766554 3468899999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 103 ~g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 103 FGALNVLVNNAGIT 116 (270)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 799999999854
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.6e-11 Score=113.97 Aligned_cols=79 Identities=18% Similarity=0.336 Sum_probs=68.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+|+++||||+|+||+++++.|+++ |++|++.+|+.++ ++++.+.+ +.++.++++|++|.++++++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 578999999999999999999998 8999999999877 66665554 3468889999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 80 g~iD~lv~nAg~~ 92 (258)
T 3a28_C 80 GGFDVLVNNAGIA 92 (258)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 799999999864
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.22 E-value=6.1e-10 Score=104.23 Aligned_cols=83 Identities=18% Similarity=0.299 Sum_probs=71.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeC--CChHHHHHHhc-
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNI--YNEGSLLMALR- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl--~d~~~l~~~~~- 107 (429)
..+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|+ +|.++++++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence 3578899999999999999999999997 8999999999988877766542 3688999999 88888777765
Q ss_pred ------CccEEEecCCCC
Q 014177 108 ------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ------~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 86 ~~~~~g~id~lv~nAg~~ 103 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGLL 103 (252)
T ss_dssp HHHHCSCCSEEEECCCCC
T ss_pred HHHhCCCCCEEEECCccC
Confidence 799999999864
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.5e-10 Score=110.24 Aligned_cols=84 Identities=17% Similarity=0.307 Sum_probs=68.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHh---CCCcEEEEeeCCChHHHHHHhc--
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
..++++|+++||||+|+||+++++.|+++ |++|++.+|+.++ ++.+.+.+ +.++.++++|++|.+++.++++
T Consensus 24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 24 SASLEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 34577899999999999999999999997 8999999998754 34433322 3568889999999988877664
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 102 ~~~~g~iD~lv~~Ag~~ 118 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVV 118 (283)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 689999999864
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.22 E-value=1e-11 Score=117.46 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
.+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.. .++.++++|++|.++++++++ +
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVERLKALNL---PNTLCAQVDVTDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHTTCC---TTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhhc---CCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 467789999999999999999999997 8999999999887654432 367889999999998888776 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 88 iD~lvnnAg~~ 98 (266)
T 3p19_A 88 ADAIVNNAGMM 98 (266)
T ss_dssp EEEEEECCCCC
T ss_pred CCEEEECCCcC
Confidence 89999999864
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=113.27 Aligned_cols=82 Identities=24% Similarity=0.364 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+.+ +.++.++.+|++|.++++++++
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 367789999999999999999999997 899999999988877665543 4468889999999999888876
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~~~~d~vi~~Ag~~ 96 (248)
T 2pnf_A 82 LVDGIDILVNNAGIT 96 (248)
T ss_dssp HSSCCSEEEECCCCC
T ss_pred hcCCCCEEEECCCCC
Confidence 799999999854
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=8.7e-11 Score=109.52 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++ +.++++|++|.++++++++ ++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVG--AHPVVMDVADPASVERGFAEALAHLGRL 78 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcC--CEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 66789999999999999999999997 8999999999988888776653 7889999999998888765 58
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||||..
T Consensus 79 d~lvn~Ag~~ 88 (245)
T 1uls_A 79 DGVVHYAGIT 88 (245)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999854
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.21 E-value=1e-10 Score=113.91 Aligned_cols=82 Identities=20% Similarity=0.262 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-----chhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-----REKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-----~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
+|.+|+++||||+|+||+++++.|+++ |++|++.+|+ .++++.+.+. .+.++.++++|++|.++++++++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~ 79 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAID 79 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence 356789999999999999999999997 8999987775 3444444433 34578999999999999888876
Q ss_pred -------CccEEEecCCCC
Q 014177 108 -------DVDLVVHAAGPF 119 (429)
Q Consensus 108 -------~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 80 ~~~~~~g~iD~lVnnAG~~ 98 (324)
T 3u9l_A 80 QIIGEDGRIDVLIHNAGHM 98 (324)
T ss_dssp HHHHHHSCCSEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCcC
Confidence 899999999853
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.7e-11 Score=112.50 Aligned_cols=82 Identities=16% Similarity=0.286 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-----C-CCcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-----G-KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-----~-~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ . .++.++++|++|.++++++++
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence 366789999999999999999999998 899999999999888776654 2 467899999999998887765
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 82 ~~~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAMF 98 (250)
T ss_dssp HHHHCCEEEEEECCCCC
T ss_pred HHhcCCCCEEEECCCcC
Confidence 689999999864
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=6.9e-12 Score=118.98 Aligned_cols=82 Identities=20% Similarity=0.327 Sum_probs=68.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh----CCCcEEEEeeCCCh----HHHHHHh
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL----GKNSEFAEVNIYNE----GSLLMAL 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l----~~~v~~~~~Dl~d~----~~l~~~~ 106 (429)
.|++|+++||||+|+||+++++.|+++ |++|++.+| +.++++++.+++ +.++.++++|++|. +++++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII 85 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence 367789999999999999999999997 899999999 888877766654 45688999999999 8888776
Q ss_pred c-------CccEEEecCCCC
Q 014177 107 R-------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-------~~DvVi~~agp~ 119 (429)
+ ++|+||||||..
T Consensus 86 ~~~~~~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 86 DCSFRAFGRCDVLVNNASAY 105 (276)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCCC
Confidence 5 789999999854
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-11 Score=126.32 Aligned_cols=165 Identities=15% Similarity=0.085 Sum_probs=113.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhH---HHHH------------HHhCCCcEEEEeeCCChHHH
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG---AAMV------------STLGKNSEFAEVNIYNEGSL 102 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~---~~l~------------~~l~~~v~~~~~Dl~d~~~l 102 (429)
.+|+||||||+||+|+++++.|.+. +++|++.+|+..+. +++. .....+++++.+|+.|.+.+
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 226 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred CCCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence 4579999999999999999999775 89999999987732 2221 12235799999999998777
Q ss_pred HHHhcCccEEEecCCCCCC------------CchHHHHHHHHHcCCcEEEeCCChh--HHHH---HHhhHHHHHHcCCcE
Q 014177 103 LMALRDVDLVVHAAGPFQQ------------APKCTVLEAAIETKTAYIDVCDDTI--YSQR---AKSFKDRAIAANIPA 165 (429)
Q Consensus 103 ~~~~~~~DvVi~~agp~~~------------~~~~~v~~aa~~~gv~~vdis~~~~--~~~~---~~~~~~~a~~~g~~~ 165 (429)
. ...++|+|||||+.... .++.+++++|.+.+.++|.+|+... +... ...+.|. ....
T Consensus 227 ~-~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~----~~~~ 301 (508)
T 4f6l_B 227 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEA----DVYK 301 (508)
T ss_dssp C-CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTT----CSCS
T ss_pred C-CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCcccccc----cccc
Confidence 7 67799999999986431 2457889999886667777775443 0000 0011110 0000
Q ss_pred EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 166 ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 166 i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
-......|+.+|+.++.++..+.+ .+.++..+|. ..++|+...+
T Consensus 302 ~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp-~~v~G~~~~~ 345 (508)
T 4f6l_B 302 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRV-GNLTSPYNGR 345 (508)
T ss_dssp SBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEE-CCEESCSSSC
T ss_pred cccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEec-ceeccCCCCC
Confidence 011235599999999999998763 5778889998 4567876543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.3e-10 Score=106.72 Aligned_cols=81 Identities=23% Similarity=0.373 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+| +.++++++.+++ +.++.++++|++|.++++++++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999997 899998877 456666655543 3468889999999999888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 80 ~g~id~lv~nAg~~ 93 (246)
T 3osu_A 80 FGSLDVLVNNAGIT 93 (246)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 789999999864
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-11 Score=116.24 Aligned_cols=81 Identities=16% Similarity=0.264 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---C---CcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---K---NSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~---~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. . ++.++++|++|.++++++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence 67789999999999999999999997 8999999999988877765542 2 57889999999998887765
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~~g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAA 97 (280)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCCC
Confidence 689999999854
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.9e-11 Score=112.73 Aligned_cols=81 Identities=23% Similarity=0.387 Sum_probs=69.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+| +.++++++.+++ +.++.++++|++|.++++++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999997 899999999 877777665544 3468889999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 80 ~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 80 FGQVDILVNNAGVT 93 (246)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 799999999854
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.3e-11 Score=115.80 Aligned_cols=83 Identities=24% Similarity=0.332 Sum_probs=68.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC------------chhHHHHHHH---hCCCcEEEEeeCCChH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN------------REKGAAMVST---LGKNSEFAEVNIYNEG 100 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~------------~~~~~~l~~~---l~~~v~~~~~Dl~d~~ 100 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+ .+.+++..+. .+.++.++++|++|.+
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 84 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA 84 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 467899999999999999999999998 8999999997 3444444332 3357889999999999
Q ss_pred HHHHHhc-------CccEEEecCCCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~~ 120 (429)
+++++++ ++|++||+||...
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 85 ALESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 8888776 7999999998643
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.20 E-value=7.1e-11 Score=112.75 Aligned_cols=83 Identities=16% Similarity=0.215 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------hHHHHHHH---hCCCcEEEEeeCCChHHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------KGAAMVST---LGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~ 104 (429)
+++++|+++||||+|+||+++++.|+++ |++|++.+|+.+ .+++..++ .+.++.++++|++|.+++++
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 4577899999999999999999999997 899999999876 33433333 23568899999999998888
Q ss_pred Hhc-------CccEEEecCCCC
Q 014177 105 ALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 105 ~~~-------~~DvVi~~agp~ 119 (429)
+++ ++|++|||||..
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAI 104 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 776 799999999864
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.6e-11 Score=115.55 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+|++|||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67789999999999999999999997 8999999999999888877763 468889999999998888776
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 84 g~iD~lvnnAg~~ 96 (280)
T 3tox_A 84 GGLDTAFNNAGAL 96 (280)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 799999999854
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.8e-11 Score=114.39 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.+++++..+++. ..+..+.+|++|.++++++++
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence 366789999999999999999999997 8999999999988777665542 346788999999998888776
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|++|||||...
T Consensus 85 ~id~lv~nAg~~~ 97 (267)
T 3t4x_A 85 KVDILINNLGIFE 97 (267)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 7999999998653
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.3e-11 Score=109.88 Aligned_cols=129 Identities=25% Similarity=0.266 Sum_probs=94.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi~~a 116 (429)
|+++|+||+|++|+++++.|+++ +|++.+|+.++++.+.+.+.. .++++|++|.++++++++ ++|+|||+|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~id~vi~~a 74 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEEAGPLDLLVHAV 74 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence 57999999999999999999984 899999999888887776643 788999999999999988 899999999
Q ss_pred CCCCC-------------------CchHHHHHHHHHcCC-cEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 117 GPFQQ-------------------APKCTVLEAAIETKT-AYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 117 gp~~~-------------------~~~~~v~~aa~~~gv-~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
|.... .+...+++++.+.+. +.|.+++...+.. . .....|+.+
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~-------------~----~~~~~Y~~s 137 (207)
T 2yut_A 75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ-------------V----PGFAAYAAA 137 (207)
T ss_dssp CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS-------------S----TTBHHHHHH
T ss_pred CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC-------------C----CCcchHHHH
Confidence 85421 122345555544443 3455554433210 0 011348999
Q ss_pred HHHHHHHHHHHHhhc
Q 014177 177 NVMAAELVRVARNES 191 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~ 191 (429)
|...+.+++.+.+++
T Consensus 138 K~a~~~~~~~~~~~~ 152 (207)
T 2yut_A 138 KGALEAYLEAARKEL 152 (207)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988877664
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-10 Score=110.27 Aligned_cols=80 Identities=33% Similarity=0.499 Sum_probs=72.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------Cc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------DV 109 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------~~ 109 (429)
++++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ ++
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i 104 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL 104 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 467789999999999999999999997 8999999999999999988887789999999999999888775 68
Q ss_pred cEEEecCC
Q 014177 110 DLVVHAAG 117 (429)
Q Consensus 110 DvVi~~ag 117 (429)
|++||+++
T Consensus 105 d~lv~~aa 112 (281)
T 3ppi_A 105 RYAVVAHG 112 (281)
T ss_dssp EEEEECCC
T ss_pred CeEEEccC
Confidence 99999943
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.7e-11 Score=114.18 Aligned_cols=80 Identities=21% Similarity=0.313 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.++++|||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.+++.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999997 899999999999888776654 3468899999999998888765
Q ss_pred -CccEEEecCCC
Q 014177 108 -DVDLVVHAAGP 118 (429)
Q Consensus 108 -~~DvVi~~agp 118 (429)
++|+|||+||.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 58999999986
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=5e-11 Score=111.45 Aligned_cols=78 Identities=23% Similarity=0.362 Sum_probs=70.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~DvV 112 (429)
|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++..++.++++|++|.++++++++ ++|+|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 57999999999999999999997 8999999999998888887776678899999999999988875 68999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
|||||..
T Consensus 79 vnnAg~~ 85 (248)
T 3asu_A 79 VNNAGLA 85 (248)
T ss_dssp EECCCCC
T ss_pred EECCCcC
Confidence 9999854
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.19 E-value=3e-10 Score=107.43 Aligned_cols=81 Identities=17% Similarity=0.333 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++. .|+.+.++.+.+.+ +.++.++++|++|.++++++++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999998 8999887 45666666655443 3568899999999998888775
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 103 ~g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 103 FGGVDVLVNNAGIM 116 (267)
T ss_dssp HSCEEEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 799999999864
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.6e-10 Score=108.02 Aligned_cols=82 Identities=22% Similarity=0.340 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+++ .++++.+.+++ +.++.++++|++|.++++++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367799999999999999999999997 8999998665 45566555544 4578899999999998888776
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 106 ~~g~iD~lvnnAg~~ 120 (271)
T 3v2g_A 106 ALGGLDILVNSAGIW 120 (271)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCcEEEECCCCC
Confidence 799999999864
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=3e-11 Score=114.46 Aligned_cols=84 Identities=17% Similarity=0.283 Sum_probs=69.9
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-CchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc---
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-NREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.++++|+++||||+|+||+++++.|+++ |++|++.+| +.+.++.+.+.+ +.++.++++|++|.++++++++
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999998 899999888 556666555443 3568899999999998888776
Q ss_pred ----CccEEEecCCCCC
Q 014177 108 ----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ----~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 102 ~~~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITR 118 (269)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 7899999998653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=4.5e-11 Score=112.61 Aligned_cols=82 Identities=22% Similarity=0.283 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 367799999999999999999999997 899999999998887776654 3467889999999998877765
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~g~id~lv~nAg~~ 95 (262)
T 1zem_A 82 FGKIDFLFNNAGYQ 95 (262)
T ss_dssp HSCCCEEEECCCCC
T ss_pred hCCCCEEEECCCCC
Confidence 789999999854
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.5e-11 Score=112.81 Aligned_cols=150 Identities=17% Similarity=0.129 Sum_probs=99.0
Q ss_pred cCCC-CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---C
Q 014177 33 FQMK-NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---D 108 (429)
Q Consensus 33 ~~~~-~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~ 108 (429)
|+.+ +.+|+++||||++.||+++++.|++. |++|++.+|+.++++.. ...++..+++|++|.++++++++ +
T Consensus 4 f~~dlf~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~g~ 78 (242)
T 4b79_A 4 FQHDIYAGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDADGVHAP---RHPRIRREELDITDSQRLQRLFEALPR 78 (242)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTSTTSC---CCTTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHhhh---hcCCeEEEEecCCCHHHHHHHHHhcCC
Confidence 4444 47899999999999999999999997 89999999998876532 23568899999999998888776 7
Q ss_pred ccEEEecCCCCCCCc--hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------CccchhH
Q 014177 109 VDLVVHAAGPFQQAP--KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG---------IYPGVSN 177 (429)
Q Consensus 109 ~DvVi~~agp~~~~~--~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g---------~~pG~s~ 177 (429)
+|++||+||...... +..-++..++. +-...+......+....+..|..+.+++- ..|+.||
T Consensus 79 iDiLVNNAGi~~~~~~~~~~~w~~~~~v-------Nl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asK 151 (242)
T 4b79_A 79 LDVLVNNAGISRDREEYDLATFERVLRL-------NLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASK 151 (242)
T ss_dssp CSEEEECCCCCCGGGGGSHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred CCEEEECCCCCCCcccCCHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHH
Confidence 999999998653211 12223333222 21222222211222222334554444431 1277888
Q ss_pred HHHHHHHHHHHhhcCCC
Q 014177 178 VMAAELVRVARNESKGE 194 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~ 194 (429)
.....+.+.+..++...
T Consensus 152 aav~~ltr~lA~Ela~~ 168 (242)
T 4b79_A 152 GAIVQLTRSLACEYAAE 168 (242)
T ss_dssp HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 88888887777665543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-10 Score=110.03 Aligned_cols=86 Identities=23% Similarity=0.266 Sum_probs=67.4
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+..++++++++||||+|+||+++++.|+++ |++|++. +|+.+++++..+.+ +.++.++++|++|.++++++++
T Consensus 20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (267)
T 4iiu_A 20 FQSNAMSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH 97 (267)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred hccccCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 444567899999999999999999999998 8888664 57777666655543 3578899999999998888776
Q ss_pred ------CccEEEecCCCCC
Q 014177 108 ------DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ------~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 98 ~~~~~g~id~li~nAg~~~ 116 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNAGIAR 116 (267)
T ss_dssp HHHHHCCCSEEEECCCCCC
T ss_pred HHHHhCCccEEEECCCCCC
Confidence 7999999998653
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.19 E-value=2.2e-11 Score=116.31 Aligned_cols=82 Identities=21% Similarity=0.356 Sum_probs=68.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh----CCCcEEEEeeCCC----hHHHHHHh
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL----GKNSEFAEVNIYN----EGSLLMAL 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l----~~~v~~~~~Dl~d----~~~l~~~~ 106 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+. ++++++.+++ +.++.++++|++| .+++++++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 467789999999999999999999998 89999999998 7777665544 3468899999999 88887776
Q ss_pred c-------CccEEEecCCCC
Q 014177 107 R-------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-------~~DvVi~~agp~ 119 (429)
+ ++|+|||+||..
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~ 117 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAF 117 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCCC
Confidence 5 799999999854
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-10 Score=109.87 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCch---hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNRE---KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~---~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|+++||||+ |+||+++++.|+++ |++|++.+|+.+ .++++.+..+ .+.++++|++|.++++++++
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~ 81 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVK 81 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHH
Confidence 3677899999998 99999999999998 899999999875 3444444333 47889999999998888776
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~~g~iD~lv~~Ag~~ 97 (261)
T 2wyu_A 82 EAFGGLDYLVHAIAFA 97 (261)
T ss_dssp HHHSSEEEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 789999999854
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-10 Score=107.55 Aligned_cols=141 Identities=16% Similarity=0.236 Sum_probs=97.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++. +|+.+.++...+++ +.++.++++|++|.++++++++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999997 8999988 56666666555443 3568899999999998888776
Q ss_pred ---CccEEEecCCCCCC--------------------CchHHHHHHHHHcCC---cEEEeCCChhHHHHHHhhHHHHHHc
Q 014177 108 ---DVDLVVHAAGPFQQ--------------------APKCTVLEAAIETKT---AYIDVCDDTIYSQRAKSFKDRAIAA 161 (429)
Q Consensus 108 ---~~DvVi~~agp~~~--------------------~~~~~v~~aa~~~gv---~~vdis~~~~~~~~~~~~~~~a~~~ 161 (429)
++|++||+||.... .+...+.+++...-. ..|.+++...+ ..
T Consensus 83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~ 150 (259)
T 3edm_A 83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGR------------DG 150 (259)
T ss_dssp HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH------------HC
T ss_pred HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhc------------cC
Confidence 78999999985411 122334444443321 23444432211 00
Q ss_pred CCcEEecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 162 NIPAITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 162 g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
+.+ ....|+.||.....+++.+..++...
T Consensus 151 ~~~----~~~~Y~asKaa~~~l~~~la~e~~~~ 179 (259)
T 3edm_A 151 GGP----GALAYATSKGAVMTFTRGLAKEVGPK 179 (259)
T ss_dssp CST----TCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCC----CcHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 100 11248999999999999888777654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-10 Score=107.21 Aligned_cols=79 Identities=19% Similarity=0.302 Sum_probs=66.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEE-EEeeCCChHHHHHHhc------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEF-AEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~-~~~Dl~d~~~l~~~~~------ 107 (429)
+|+|+||||+|+||+++++.|+++ |++|++. +|+.++++++.+.+ +.++.. +.+|++|.++++++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 478999999999999999999997 8899988 89988877665544 235666 8999999998888754
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 79 ~~~d~li~~Ag~~ 91 (245)
T 2ph3_A 79 GGLDTLVNNAGIT 91 (245)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 799999999854
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.18 E-value=1.9e-10 Score=106.65 Aligned_cols=79 Identities=20% Similarity=0.333 Sum_probs=66.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+|+|+||||+|+||+++++.|+++ |++|++ .+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 378999999999999999999997 889988 488887777665543 3467889999999999888876
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 79 ~id~li~~Ag~~ 90 (244)
T 1edo_A 79 TIDVVVNNAGIT 90 (244)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999999854
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=2e-11 Score=117.34 Aligned_cols=81 Identities=17% Similarity=0.257 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---C---CcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---K---NSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~---~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. . ++.++++|++|.++++++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999997 8999999999988877665542 2 57889999999998888775
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 102 ~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 102 AKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 799999999854
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.2e-11 Score=115.44 Aligned_cols=82 Identities=21% Similarity=0.359 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc---eEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL---QIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~---~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
++++|+++||||+|+||+++++.|+++ |+ .|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 107 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEA--SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE 107 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHH--HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHc--CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 367899999999999999999999987 55 9999999999888877654 2457889999999999988876
Q ss_pred -------CccEEEecCCCC
Q 014177 108 -------DVDLVVHAAGPF 119 (429)
Q Consensus 108 -------~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 108 ~~~~~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKA 126 (287)
T ss_dssp TSCGGGCSCCEEEECCCCC
T ss_pred HHHHhcCCCCEEEECCCcC
Confidence 589999999854
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.1e-11 Score=113.90 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=71.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 56799999999999999999999998 899999999998887776655 3578899999999988887775
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 109 ~iD~lvnnAg~~ 120 (275)
T 4imr_A 109 PVDILVINASAQ 120 (275)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 789999999854
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.3e-10 Score=107.92 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++ +.++.++++|++|.++++++++ ++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPG--------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCC--------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCccc--------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 67789999999999999999999997 8999999998765 2468899999999998888776 69
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+|||+||..
T Consensus 76 D~lv~~Ag~~ 85 (264)
T 2dtx_A 76 SVLVNNAGIE 85 (264)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999854
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.17 E-value=3.8e-11 Score=113.67 Aligned_cols=85 Identities=21% Similarity=0.389 Sum_probs=69.5
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc--
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.+++++|+|+||||+|+||+++++.|+++ |++|++.+|+ .+..+.+.+.+ +.++.++++|++|.+++.++++
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 34577899999999999999999999997 8999999994 44444444433 3578899999999998888775
Q ss_pred -----CccEEEecCCCCC
Q 014177 108 -----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -----~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 102 ~~~~g~id~li~nAg~~~ 119 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVR 119 (271)
T ss_dssp HHHHSSCCEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCcCC
Confidence 7999999998653
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4.1e-11 Score=116.80 Aligned_cols=158 Identities=12% Similarity=0.076 Sum_probs=104.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-------eEEEEecCc--hhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-------QIVVGSRNR--EKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-------~v~v~~R~~--~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~ 108 (429)
+++|+||||+||||++++..|+++ ++ +|++.|++. ++++.....+. ..+.+. .|+.+.+.+.+.+++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~ 80 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKD 80 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCC
Confidence 368999999999999999999986 43 899999864 33332222221 112233 577666667788999
Q ss_pred ccEEEecCCCCCC-------------CchHHHHHHHHHcC-Cc--EEEeCCChhHHHHHHhhHHHHHHc-CCcEEecCCC
Q 014177 109 VDLVVHAAGPFQQ-------------APKCTVLEAAIETK-TA--YIDVCDDTIYSQRAKSFKDRAIAA-NIPAITTGGI 171 (429)
Q Consensus 109 ~DvVi~~agp~~~-------------~~~~~v~~aa~~~g-v~--~vdis~~~~~~~~~~~~~~~a~~~-g~~~i~~~g~ 171 (429)
+|+|||+||.... .++.+++++|.+.+ .+ .+.+++..... ....+ +.. +.+ ...
T Consensus 81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~---~~~~~--~~~~~~~----p~~ 151 (327)
T 1y7t_A 81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN---ALIAY--KNAPGLN----PRN 151 (327)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH---HHHHH--HTCTTSC----GGG
T ss_pred CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh---HHHHH--HHcCCCC----hhh
Confidence 9999999986532 13577899999886 54 34444332111 11111 111 111 112
Q ss_pred ccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 172 YPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.||.||+.++.+...+.+.++.++..+|. ++++|+++
T Consensus 152 ~yg~tkl~~er~~~~~a~~~g~~~~~vr~-~~V~G~h~ 188 (327)
T 1y7t_A 152 FTAMTRLDHNRAKAQLAKKTGTGVDRIRR-MTVWGNHS 188 (327)
T ss_dssp EEECCHHHHHHHHHHHHHHHTCCGGGEEC-CEEEBCSS
T ss_pred eeccchHHHHHHHHHHHHHhCcChhheee-eEEEcCCC
Confidence 48999999999988888788888889996 55678765
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.3e-10 Score=107.95 Aligned_cols=82 Identities=23% Similarity=0.235 Sum_probs=69.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC----------------chhHHHHHHHh---CCCcEEEEeeC
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN----------------REKGAAMVSTL---GKNSEFAEVNI 96 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~----------------~~~~~~l~~~l---~~~v~~~~~Dl 96 (429)
++.+|+++||||+|+||+++++.|+++ |++|++.+|+ .++++++.+.+ +.++.++++|+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 85 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV 85 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence 467899999999999999999999997 8999999987 55566555443 35688999999
Q ss_pred CChHHHHHHhc-------CccEEEecCCCC
Q 014177 97 YNEGSLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 97 ~d~~~l~~~~~-------~~DvVi~~agp~ 119 (429)
+|.++++++++ ++|++|||||..
T Consensus 86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 86 RDYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 99999888775 799999999854
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.17 E-value=4.1e-10 Score=106.11 Aligned_cols=140 Identities=14% Similarity=0.200 Sum_probs=92.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC---chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN---REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~---~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+ .++++++.+++ +.++.++++|++|.++++++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 467899999999999999999999997 8999998764 44555555554 3467889999999999888876
Q ss_pred -----CccEEEecCCCCCC-------------------CchHHHHHHHHHc---CCcEEEeCCChhHHHHHHhhHHHHHH
Q 014177 108 -----DVDLVVHAAGPFQQ-------------------APKCTVLEAAIET---KTAYIDVCDDTIYSQRAKSFKDRAIA 160 (429)
Q Consensus 108 -----~~DvVi~~agp~~~-------------------~~~~~v~~aa~~~---gv~~vdis~~~~~~~~~~~~~~~a~~ 160 (429)
++|++|||||.... .+...+.+++... +-..|.+++...+.. .
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~----------~ 155 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY----------T 155 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH----------H
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC----------C
Confidence 78999999985432 1123334444432 223344444332211 0
Q ss_pred cCCcEEecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 161 ANIPAITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 161 ~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
.+ ...|+.||.....+++.+..++...
T Consensus 156 ~~-------~~~Y~asKaa~~~l~~~la~e~~~~ 182 (262)
T 3ksu_A 156 GF-------YSTYAGNKAPVEHYTRAASKELMKQ 182 (262)
T ss_dssp CC-------CCC-----CHHHHHHHHHHHHTTTT
T ss_pred CC-------CchhHHHHHHHHHHHHHHHHHHHHc
Confidence 01 1349999999999999888776543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-09 Score=101.76 Aligned_cols=83 Identities=16% Similarity=0.165 Sum_probs=70.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeC--CChHHHHHHhc-
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNI--YNEGSLLMALR- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl--~d~~~l~~~~~- 107 (429)
+.+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. .+..++.+|+ +|.++++++++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence 4578899999999999999999999997 8999999999998887766542 3567788888 88888777665
Q ss_pred ------CccEEEecCCCC
Q 014177 108 ------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ------~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 88 ~~~~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASII 105 (247)
T ss_dssp HHHHHSCCSEEEECCCCC
T ss_pred HHHhCCCCCEEEECCccC
Confidence 789999999864
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=6.2e-11 Score=112.60 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=69.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec-------------CchhHHHHHHHh---CCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR-------------NREKGAAMVSTL---GKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R-------------~~~~~~~l~~~l---~~~v~~~~~Dl~d~ 99 (429)
++.+|+++||||+|+||+++++.|+++ |++|++.+| +.+++++..+.+ +.++.++++|++|.
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF 85 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 467899999999999999999999998 899999998 555565554433 35688999999999
Q ss_pred HHHHHHhc-------CccEEEecCCCCC
Q 014177 100 GSLLMALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l~~~~~-------~~DvVi~~agp~~ 120 (429)
++++++++ ++|++||+||...
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 98888775 6999999998653
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.16 E-value=6.2e-11 Score=111.13 Aligned_cols=79 Identities=20% Similarity=0.293 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.+ +...+++ +.++.++++|++|.++++++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 77 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF 77 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999997 899999999876 2232322 3467888999999999988887
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 78 g~id~lv~~Ag~~ 90 (255)
T 2q2v_A 78 GGVDILVNNAGIQ 90 (255)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 899999999854
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.7e-10 Score=109.24 Aligned_cols=82 Identities=16% Similarity=0.302 Sum_probs=66.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHH---HhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVS---TLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~---~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|++|||||+|+||+++++.|+++ |++|++.+|+. +.++.+.+ ..+.++.++++|++|.++++++++
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 467899999999999999999999997 89999998873 33333333 334578899999999998887765
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 124 ~~~g~iD~lv~nAg~~ 139 (294)
T 3r3s_A 124 EALGGLDILALVAGKQ 139 (294)
T ss_dssp HHHTCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCc
Confidence 789999999864
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-11 Score=112.90 Aligned_cols=79 Identities=10% Similarity=0.170 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh---cCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL---RDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~---~~~DvVi 113 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++. ++. ++.++++|++|.++++++. .++|+||
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~~~~~~~~~id~lv 79 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELE-KYP-GIQTRVLDVTKKKQIDQFANEVERLDVLF 79 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGG-GST-TEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH-hcc-CceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence 66789999999999999999999997 899999999988776655 442 6888999999999887764 4799999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
|+||..
T Consensus 80 ~~Ag~~ 85 (246)
T 2ag5_A 80 NVAGFV 85 (246)
T ss_dssp ECCCCC
T ss_pred ECCccC
Confidence 999864
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=5.5e-10 Score=105.34 Aligned_cols=82 Identities=18% Similarity=0.154 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----C-CcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----K-NSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~-~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. . ++.++++|++|.++++++++
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 477899999999999999999999997 8999999999988877666542 2 48889999999998887765
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 83 RTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHCSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 689999999864
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.1e-10 Score=108.71 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=66.5
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCch---hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNRE---KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~---~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||+ |+||+++++.|+++ |++|++.+|+.+ .++++.+..+ .+.++++|++|.++++++++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHH
Confidence 567899999998 99999999999997 899999999876 3444444333 47889999999998888775
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 81 ~~g~id~lv~nAg~~ 95 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFA 95 (275)
T ss_dssp HTSCEEEEEECCCCC
T ss_pred HcCCCCEEEECCccC
Confidence 689999999854
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=6.1e-10 Score=106.80 Aligned_cols=82 Identities=22% Similarity=0.350 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCCh-HHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNE-GSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~-~~l~~~~~--- 107 (429)
.+++++|+||||+|+||+++++.|+++ |++|++.+|+.+++++..+++. .++.++++|++|. ++++++++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 356789999999999999999999997 8999999999988777666542 3688999999998 77766654
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 87 ~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 87 THFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhCCCCCEEEECCccc
Confidence 799999999864
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.2e-11 Score=113.44 Aligned_cols=80 Identities=20% Similarity=0.322 Sum_probs=68.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++|++|||||+|+||+++++.|+++ |++|++. +|+.++++++.+++ +.++.++++|++|.++++++++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999997 8999886 89988877776654 3468899999999998888775
Q ss_pred -CccEEEecCCCC
Q 014177 108 -DVDLVVHAAGPF 119 (429)
Q Consensus 108 -~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 81 g~id~lv~nAg~~ 93 (258)
T 3oid_A 81 GRLDVFVNNAASG 93 (258)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 579999999853
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.5e-11 Score=113.21 Aligned_cols=81 Identities=22% Similarity=0.318 Sum_probs=65.5
Q ss_pred CccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 31 AHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 31 ~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.....++++|+||||||+|+||+++++.|+++ |++|++.+|+.+... .....+++|++|.++++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSDV-------NVSDHFKIDVTNEEEVKEAVEKTT 76 (269)
T ss_dssp ----CTTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC--CT-------TSSEEEECCTTCHHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhcc-------CceeEEEecCCCHHHHHHHHHHHH
Confidence 33455678899999999999999999999997 899999999876542 356889999999998888776
Q ss_pred ----CccEEEecCCCCC
Q 014177 108 ----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ----~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 77 ~~~g~iD~lv~nAg~~~ 93 (269)
T 3vtz_A 77 KKYGRIDILVNNAGIEQ 93 (269)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCcCC
Confidence 7999999998643
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.4e-11 Score=114.01 Aligned_cols=82 Identities=23% Similarity=0.286 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++.+|++|||||+|+||+++++.|+++ |++|++.+|+.++++++.+++. ..+.++++|++|.++++++++
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999997 8999999999988877766542 235889999999998888775
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 108 ~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 108 EFARLDLLVNNAGSN 122 (281)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 679999999864
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.15 E-value=4.4e-11 Score=112.31 Aligned_cols=81 Identities=31% Similarity=0.431 Sum_probs=65.2
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++++|+++||||+|+||+++++.|+++ |++|++.+|+.++ ..+.++.++.++++|++|.++++++++
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g 78 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGED---VVADLGDRARFAAADVTDEAAVASALDLAETMG 78 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence 34577899999999999999999999998 8999999996554 334455678999999999999888876
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 79 ~id~lv~nAg~~ 90 (257)
T 3tl3_A 79 TLRIVVNCAGTG 90 (257)
T ss_dssp CEEEEEECGGGS
T ss_pred CCCEEEECCCCC
Confidence 899999999864
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.15 E-value=6.9e-11 Score=112.17 Aligned_cols=83 Identities=12% Similarity=0.233 Sum_probs=68.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------HHHHHHH---hCCCcEEEEeeCCChHHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------GAAMVST---LGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------~~~l~~~---l~~~v~~~~~Dl~d~~~l~~ 104 (429)
.++++|+++||||+|+||+++++.|+++ |++|++.+|+.++ ++...+. .+.++.++++|++|.+++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 3578899999999999999999999997 8999999998753 3433333 24568899999999998888
Q ss_pred Hhc-------CccEEEecCCCC
Q 014177 105 ALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 105 ~~~-------~~DvVi~~agp~ 119 (429)
+++ ++|++|||||..
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcc
Confidence 765 789999999864
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.3e-11 Score=116.92 Aligned_cols=83 Identities=18% Similarity=0.219 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC------------chhHHHHHHHh---CCCcEEEEeeCCChH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN------------REKGAAMVSTL---GKNSEFAEVNIYNEG 100 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~------------~~~~~~l~~~l---~~~v~~~~~Dl~d~~ 100 (429)
++++|++|||||+|+||+++++.|+++ |++|++.+|+ .+++++..+.+ +.++.++++|++|.+
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA 120 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 366789999999999999999999998 8999999886 44555444332 357889999999999
Q ss_pred HHHHHhc-------CccEEEecCCCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~~ 120 (429)
+++++++ ++|+|||+||...
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 8888776 7999999998653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.7e-11 Score=115.46 Aligned_cols=139 Identities=14% Similarity=0.177 Sum_probs=99.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC--ccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD--VDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~--~DvVi~~ag 117 (429)
|+|+||||+|++|+++++.|++ +++|++.+|+.... .+ +++|++|.+++.+++++ +|+||||||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~---g~~V~~~~r~~~~~--------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 66 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE---RHEVIKVYNSSEIQ--------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAA 66 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT---TSCEEEEESSSCCT--------TC---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCChhHHHHHHHHhc---CCeEEEecCCCcCC--------CC---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence 4799999999999999999994 58999999987421 12 78999999999998885 999999998
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
.... .++.+++++|.+.++++|.+|+...|......+++. .+ ......|+.+|..++.
T Consensus 67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~~~~e~-----~~--~~~~~~Y~~sK~~~e~ 139 (273)
T 2ggs_A 67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEE-----DI--PNPINYYGLSKLLGET 139 (273)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSCSBCTT-----SC--CCCSSHHHHHHHHHHH
T ss_pred ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCCCcCCC-----CC--CCCCCHHHHHHHHHHH
Confidence 6531 235788999999888888887655442111111111 01 1112458999998888
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecC
Q 014177 183 LVRVARNESKGEPERLRFSYYTAG 206 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G 206 (429)
+++. .+...+|+. +.+|
T Consensus 140 ~~~~------~~~~~iR~~-~v~G 156 (273)
T 2ggs_A 140 FALQ------DDSLIIRTS-GIFR 156 (273)
T ss_dssp HHCC------TTCEEEEEC-CCBS
T ss_pred HHhC------CCeEEEecc-cccc
Confidence 8752 466788884 4566
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=9.2e-11 Score=110.31 Aligned_cols=149 Identities=16% Similarity=0.117 Sum_probs=96.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH--HHhCCCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV--STLGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~--~~l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++|.++||||++.||+++++.|++. |++|++.+|+.+..+.+. ...+.++.++++|++|.++++++++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 578899999999999999999999997 899999999887644332 2234578999999999988877764
Q ss_pred -CccEEEecCCCCCCC---chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------Cccc
Q 014177 108 -DVDLVVHAAGPFQQA---PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG---------IYPG 174 (429)
Q Consensus 108 -~~DvVi~~agp~~~~---~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g---------~~pG 174 (429)
++|++||+||..... -+..-++..++. +-...+......+....+..|..+.+++- ..|+
T Consensus 82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v-------Nl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~ 154 (258)
T 4gkb_A 82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLER-------NLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYC 154 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTSCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHH
T ss_pred CCCCEEEECCCCCCCCCccCCHHHHHHHHHH-------HhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHH
Confidence 799999999864321 012223332222 11112221111111122234544444321 1277
Q ss_pred hhHHHHHHHHHHHHhhcCC
Q 014177 175 VSNVMAAELVRVARNESKG 193 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~ 193 (429)
.||.....+.+.+..++..
T Consensus 155 asKaav~~ltr~lA~ela~ 173 (258)
T 4gkb_A 155 ASKGAQLALTREWAVALRE 173 (258)
T ss_dssp HHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 8888888787777666543
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.8e-10 Score=105.88 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=68.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC------------chhHHHHHHHh---CCCcEEEEeeCCChH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN------------REKGAAMVSTL---GKNSEFAEVNIYNEG 100 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~------------~~~~~~l~~~l---~~~v~~~~~Dl~d~~ 100 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+ .+++++..+++ +.++.++++|++|.+
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD 102 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 367799999999999999999999997 8999999987 55555554433 357889999999999
Q ss_pred HHHHHhc-------CccEEEecCCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp~ 119 (429)
+++++++ ++|++|||||..
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 8888775 799999999854
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.2e-11 Score=114.80 Aligned_cols=75 Identities=21% Similarity=0.301 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.++... .++.++++|++|.++++++++ ++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKPSAD------PDIHTVAGDISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCCCSS------TTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhhccc------CceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence 56789999999999999999999997 8999999998765321 357899999999999888876 79
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||||..
T Consensus 98 D~lv~nAg~~ 107 (260)
T 3un1_A 98 DSLVNNAGVF 107 (260)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999864
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.14 E-value=3.6e-11 Score=114.75 Aligned_cols=81 Identities=19% Similarity=0.274 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---C-CCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---G-KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~-~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+++++|+||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ + .++.++.+|++|.++++++++
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999997 899999999998887766543 2 257889999999988887765
Q ss_pred ---CccEEEec-CCC
Q 014177 108 ---DVDLVVHA-AGP 118 (429)
Q Consensus 108 ---~~DvVi~~-agp 118 (429)
++|+|||+ +|.
T Consensus 103 ~~g~iD~li~naag~ 117 (286)
T 1xu9_A 103 LMGGLDMLILNHITN 117 (286)
T ss_dssp HHTSCSEEEECCCCC
T ss_pred HcCCCCEEEECCccC
Confidence 79999999 554
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.5e-10 Score=104.94 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 367789999999999999999999997 899999999988877766554 3467889999999988777653
Q ss_pred ---CccEEEecCC
Q 014177 108 ---DVDLVVHAAG 117 (429)
Q Consensus 108 ---~~DvVi~~ag 117 (429)
++|++||+||
T Consensus 80 ~~g~id~lvnnAg 92 (260)
T 2qq5_A 80 QQGRLDVLVNNAY 92 (260)
T ss_dssp HTTCCCEEEECCC
T ss_pred cCCCceEEEECCc
Confidence 5799999994
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-10 Score=107.08 Aligned_cols=80 Identities=18% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||+ |+||+++++.|+++ |++|++.+|+. +.++++.+..+ ...++++|++|.++++++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHH
Confidence 566899999999 99999999999997 89999999987 33344443333 35789999999998888776
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 84 ~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFA 98 (265)
T ss_dssp TCSSEEEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 689999999864
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.8e-11 Score=112.78 Aligned_cols=145 Identities=14% Similarity=0.025 Sum_probs=96.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----CccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----DVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----~~DvVi~ 114 (429)
||+|+||||+|+||+++++.|+++ |++|++.+|+.++++. .+++|++|.++++++++ ++|+|||
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~----------~~~~D~~~~~~~~~~~~~~~~~~d~vi~ 68 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIEA----------DLSTPGGRETAVAAVLDRCGGVLDGLVC 68 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC----------CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHccc----------cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence 468999999999999999999997 8999999998765321 15689999888888876 8999999
Q ss_pred cCCCCC-C-----------CchHHHHHHHHHc----C-CcEEEeCCChhHHHHHH--hhHHH------------HHHcCC
Q 014177 115 AAGPFQ-Q-----------APKCTVLEAAIET----K-TAYIDVCDDTIYSQRAK--SFKDR------------AIAANI 163 (429)
Q Consensus 115 ~agp~~-~-----------~~~~~v~~aa~~~----g-v~~vdis~~~~~~~~~~--~~~~~------------a~~~g~ 163 (429)
|||... . .+...++++|.+. + .+.|.+++...+..... ...+. ......
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T 2dkn_A 69 CAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ 148 (255)
T ss_dssp CCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 998654 1 1345667777654 3 45667776554421100 00000 000000
Q ss_pred cEEecCCCccchhHHHHHHHHHHHHhh---cCCCCeEEEE
Q 014177 164 PAITTGGIYPGVSNVMAAELVRVARNE---SKGEPERLRF 200 (429)
Q Consensus 164 ~~i~~~g~~pG~s~~~a~~~~~~~~~~---~~~~v~~i~~ 200 (429)
....|+.||...+.+++.+.++ .+.++..++.
T Consensus 149 -----~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~p 183 (255)
T 2dkn_A 149 -----THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAP 183 (255)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEE
T ss_pred -----cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcC
Confidence 1134999999999988887655 3444444444
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-10 Score=112.16 Aligned_cols=82 Identities=20% Similarity=0.297 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC----------chhHHHHHHHh---CCCcEEEEeeCCChHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN----------REKGAAMVSTL---GKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~----------~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~ 103 (429)
+.++++|||||+|+||+++++.|+++ |++|++.+|+ .++++.+.+++ +.++.++++|++|.++++
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 56789999999999999999999997 8999999987 56666665544 345788999999999988
Q ss_pred HHhc-------CccEEEecCCCCC
Q 014177 104 MALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 104 ~~~~-------~~DvVi~~agp~~ 120 (429)
++++ ++|+||||||...
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVR 126 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCCC
Confidence 8776 7899999998653
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.6e-10 Score=106.37 Aligned_cols=80 Identities=11% Similarity=0.180 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCch---hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNRE---KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~---~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||+ |+||+++++.|+++ |++|++.+|+.+ .++++.+..+ .+.++++|++|.++++++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 567899999998 89999999999997 899999999875 3334433333 47889999999998888775
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 96 ~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 96 NWGSLDIIVHSIAYA 110 (285)
T ss_dssp HTSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 689999999854
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.12 E-value=6.6e-10 Score=105.09 Aligned_cols=83 Identities=22% Similarity=0.356 Sum_probs=68.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|++|||||+|+||+++++.|+++ |++|++.+++ .+.++++.+++ +.++.++++|++|.++++++++
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 477899999999999999999999997 8999997764 45555555443 3578899999999998888775
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 93 ~~g~id~lvnnAg~~~ 108 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVS 108 (270)
T ss_dssp HHSCCCEEECCCCCCC
T ss_pred HcCCCCEEEECCCCCC
Confidence 7899999998653
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=5.7e-10 Score=105.08 Aligned_cols=82 Identities=11% Similarity=0.194 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcCChH--HHHHHHHHHhHcCCCceEEEEecCchhHHH---HHHHhCC-CcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTGR--VGGSTAVALSKLCPDLQIVVGSRNREKGAA---MVSTLGK-NSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~--iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~---l~~~l~~-~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
++++++++||||+|+ ||+++++.|+++ |++|++.+|+....+. +.+..+. ++.++++|++|.++++++++
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 467899999999988 999999999997 8999999998654433 3333333 68999999999998888775
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 82 ~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCeeEEEEccccc
Confidence 689999999864
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.11 E-value=7.4e-11 Score=106.29 Aligned_cols=63 Identities=24% Similarity=0.415 Sum_probs=55.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC---ccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD---VDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~---~DvVi~~a 116 (429)
|+++|+||+|++|+++++.|+ + |++|++.+|+.+ .+.+|++|.+++++++++ +|+|||||
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~--------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~a 66 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSG--------------DVTVDITNIDSIKKMYEQVGKVDAIVSAT 66 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSS--------------SEECCTTCHHHHHHHHHHHCCEEEEEECC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCcc--------------ceeeecCCHHHHHHHHHHhCCCCEEEECC
Confidence 479999999999999999999 7 899999999864 368999999999888874 89999999
Q ss_pred CCC
Q 014177 117 GPF 119 (429)
Q Consensus 117 gp~ 119 (429)
|..
T Consensus 67 g~~ 69 (202)
T 3d7l_A 67 GSA 69 (202)
T ss_dssp CCC
T ss_pred CCC
Confidence 853
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.1e-10 Score=110.78 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=66.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+. .+++..+++ +.++.++++|++|.++++++.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 467899999999999999999999997 89999999764 444444433 2457889999999988877654
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 105 g~iD~lv~nAg~~~ 118 (273)
T 3uf0_A 105 RRVDVLVNNAGIIA 118 (273)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCcEEEECCCCCC
Confidence 7999999998653
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=8.1e-11 Score=112.72 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=69.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh----CCCcEEEEeeCCChH-----------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL----GKNSEFAEVNIYNEG----------- 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~----------- 100 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+ |+.++++++.+++ +.++.++++|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 66789999999999999999999997 89999999 9988877766554 346889999999988
Q ss_pred ------HHHHHhc-------CccEEEecCCCC
Q 014177 101 ------SLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 101 ------~l~~~~~-------~~DvVi~~agp~ 119 (429)
+++++++ ++|++|||||..
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 116 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSF 116 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 8877765 789999999854
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=7.7e-10 Score=103.81 Aligned_cols=81 Identities=16% Similarity=0.210 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhH---cCCCceEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhc-
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSK---LCPDLQIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~---~~~g~~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+++|+++||||+|+||+++++.|++ + |++|++.+|+.++++.+.+++ +.++.++++|++|.++++++++
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 6678999999999999999999998 5 899999999998887776655 3457889999999998877654
Q ss_pred --------Ccc--EEEecCCCC
Q 014177 108 --------DVD--LVVHAAGPF 119 (429)
Q Consensus 108 --------~~D--vVi~~agp~ 119 (429)
++| +|||+||..
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~ 103 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATL 103 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCC
T ss_pred HHhccccccCCccEEEECCccc
Confidence 358 999999854
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=5.4e-10 Score=105.25 Aligned_cols=83 Identities=11% Similarity=0.075 Sum_probs=67.9
Q ss_pred CCCCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCchhH---HHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 34 QMKNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNREKG---AAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~---~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
...+++|+|+||||+ |+||+++++.|+++ |++|++.+|+.... +++.+.. +++.++++|++|.++++++++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 85 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEF-GSELVFPCDVADDAQIDALFAS 85 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHc-CCcEEEECCCCCHHHHHHHHHH
Confidence 345788999999998 99999999999997 89999999885433 3333333 358899999999999888876
Q ss_pred ------CccEEEecCCCC
Q 014177 108 ------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ------~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 86 ~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp HHHHCSCEEEEEECCCCC
T ss_pred HHHHcCCCCEEEECCccC
Confidence 689999999864
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=8.4e-11 Score=110.12 Aligned_cols=85 Identities=25% Similarity=0.304 Sum_probs=66.4
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc--
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
....++++||||||+|+||+++++.|+++ |++|++.+ |+.++.+...+.+ +.++.++++|++|.++++++++
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV 85 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence 34467899999999999999999999997 89999887 6666655544433 3568899999999998888776
Q ss_pred -----CccEEEecCCCCC
Q 014177 108 -----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -----~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 86 ~~~~g~id~lv~~Ag~~~ 103 (256)
T 3ezl_A 86 KAEVGEIDVLVNNAGITR 103 (256)
T ss_dssp HHHTCCEEEEEECCCCCC
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 7899999998643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=7.4e-11 Score=115.04 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh----CCCcEEEEeeCCChH-----------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL----GKNSEFAEVNIYNEG----------- 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~----------- 100 (429)
++++++|||||+|+||+++++.|+++ |++|++.+ |+.++++++.+++ +.++.++++|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 121 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 121 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence 56789999999999999999999997 89999999 9988887766654 346889999999988
Q ss_pred ------HHHHHhc-------CccEEEecCCCC
Q 014177 101 ------SLLMALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 101 ------~l~~~~~-------~~DvVi~~agp~ 119 (429)
+++++++ ++|+||||||..
T Consensus 122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 153 (328)
T 2qhx_A 122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSF 153 (328)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred ccccHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 8877765 789999999854
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=3.5e-10 Score=106.92 Aligned_cols=81 Identities=22% Similarity=0.234 Sum_probs=70.2
Q ss_pred CCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhCCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+++|+++|||| +|+||+++++.|+++ |++|++.+|+.++ ++++.++++.++.++++|++|.++++++++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI 82 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence 66789999998 899999999999997 8999999999876 466766666678899999999998888776
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 83 g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 83 GAGNKLDGVVHSIGFM 98 (269)
T ss_dssp CTTCCEEEEEECCCCC
T ss_pred CCCCCceEEEECCccC
Confidence 789999999854
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=108.33 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=64.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.+. +.. .+..+++|++|.++++++++ +
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~-----~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQ-----EQY--PFATEVMDVADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCS-----SCC--SSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhh-----hcC--CceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467789999999999999999999997 8999999998763 111 27889999999998888876 7
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 75 id~lv~~Ag~~ 85 (250)
T 2fwm_X 75 LDALVNAAGIL 85 (250)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCcC
Confidence 99999999854
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=109.84 Aligned_cols=80 Identities=18% Similarity=0.293 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++++++||||+|+||+++++.|+++ |++|++.+|+.+. .+.+.+.+ +.++.++++|++|.++++++++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999997 8999998776543 34443332 2468899999999999888876
Q ss_pred --CccEEEecCCC
Q 014177 108 --DVDLVVHAAGP 118 (429)
Q Consensus 108 --~~DvVi~~agp 118 (429)
++|+|||+||+
T Consensus 83 ~g~id~lv~~Ag~ 95 (264)
T 3i4f_A 83 FGKIDFLINNAGP 95 (264)
T ss_dssp HSCCCEEECCCCC
T ss_pred hCCCCEEEECCcc
Confidence 78999999994
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=108.00 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=96.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
++++|.++||||++.||+++++.|++. |++|++.+|+.. ...+..+..+.++..+++|++|+++++++++ ++|++
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 378999999999999999999999998 899999999853 2233334445678899999999988887776 69999
Q ss_pred EecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHH--cCCcEEecCC---------CccchhH
Q 014177 113 VHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIA--ANIPAITTGG---------IYPGVSN 177 (429)
Q Consensus 113 i~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~--~g~~~i~~~g---------~~pG~s~ 177 (429)
||+||...... +..-++..++ ++-...|+.....+....++ .|..+.+++- ..|+.||
T Consensus 84 VNNAGi~~~~~~~~~~~~~w~~~~~-------vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK 156 (247)
T 4hp8_A 84 VNNAGIIRRADSVEFSELDWDEVMD-------VNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK 156 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHH-------HHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred EECCCCCCCCCcccccHHHHHHHHH-------HHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence 99998654311 1222332222 22222232222122222222 2444434321 1277888
Q ss_pred HHHHHHHHHHHhhcCCC
Q 014177 178 VMAAELVRVARNESKGE 194 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~ 194 (429)
.....+.+.+..++...
T Consensus 157 aav~~ltr~lA~Ela~~ 173 (247)
T 4hp8_A 157 HGVAGLTKLLANEWAAK 173 (247)
T ss_dssp HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 88888877777665543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-09 Score=103.96 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCChH--HHHHHHHHHhHcCCCceEEEEecCchhHH---HHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGR--VGGSTAVALSKLCPDLQIVVGSRNREKGA---AMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~--iG~~l~~~L~~~~~g~~v~v~~R~~~~~~---~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||+|+ ||+++++.|+++ |++|++.+|+.+..+ ++.+.. +++.++++|++|.++++++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHH
Confidence 67899999999988 999999999997 899999999864333 333333 368899999999998888775
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 106 ~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 106 KWGKLDFLVHAIGFS 120 (293)
T ss_dssp HTSCCSEEEECCCCC
T ss_pred hcCCCCEEEECCccC
Confidence 789999999865
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.9e-10 Score=108.09 Aligned_cols=81 Identities=9% Similarity=0.158 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCChH--HHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGR--VGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~--iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++||||+|+ ||+++++.|+++ |++|++.+|+. +.++++.+..+ ++.++++|++|.++++++++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHHHHHH
Confidence 45789999999966 999999999997 89999999987 66666666554 58899999999998888775
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|+||||||...
T Consensus 101 ~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAP 115 (280)
T ss_dssp CSSCCEEEECCCCCC
T ss_pred cCCCCEEEECCccCC
Confidence 5799999998653
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.8e-10 Score=103.03 Aligned_cols=70 Identities=30% Similarity=0.365 Sum_probs=61.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------CccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------DVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------~~DvV 112 (429)
+|+++||||+|+||+++++.|+++ |++|++.+|+.+ . ..+.++++|++|.++++++++ ++|+|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~-~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l 70 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE-G--------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV 70 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC-S--------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc-c--------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence 578999999999999999999998 899999999875 2 346889999999999998887 78999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||+||..
T Consensus 71 i~~ag~~ 77 (242)
T 1uay_A 71 VSAAGVG 77 (242)
T ss_dssp EECCCCC
T ss_pred EEccccc
Confidence 9999853
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.07 E-value=6.3e-10 Score=104.03 Aligned_cols=72 Identities=21% Similarity=0.290 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
.++|+|+||||+|+||+++++.|+++ |++|++.+|+.++.+ ...+.+|++|.++++++++ ++
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~---------~~~~~~d~~d~~~v~~~~~~~~~~~g~i 88 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENPNA---------DHSFTIKDSGEEEIKSVIEKINSKSIKV 88 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTTS---------SEEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccccc---------ccceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999997 899999999987532 3567899999998888775 57
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||||||..
T Consensus 89 D~li~~Ag~~ 98 (251)
T 3orf_A 89 DTFVCAAGGW 98 (251)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCccC
Confidence 9999999853
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.4e-09 Score=104.34 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchhHHHH---HHHhCCCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREKGAAM---VSTLGKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l---~~~l~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+++|+++||||+| +||+++++.|+++ |++|++.+|+.+..+.+ .+.. +.+.++++|++|.++++++++
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 36679999999987 8999999999997 89999999997554433 3333 357889999999999888875
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 104 ~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFS 119 (296)
T ss_dssp HHHSCCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 689999999865
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.07 E-value=2e-10 Score=108.60 Aligned_cols=81 Identities=17% Similarity=0.273 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+.+++++||||+|+||+++++.|+++ |++|++.+ |+.+.++.....+ +.++.++++|++|.++++++++
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999997 89999998 5555555444333 3568999999999998888776
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 101 ~g~id~li~nAg~~ 114 (269)
T 3gk3_A 101 FGKVDVLINNAGIT 114 (269)
T ss_dssp HSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 799999999864
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-09 Score=101.53 Aligned_cols=82 Identities=13% Similarity=0.242 Sum_probs=69.5
Q ss_pred CCCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
++++|+++||||+| .||+++++.|++. |++|++.+|+.+.++++.+.+. .++..+++|++|.++++++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 57899999999875 6999999999998 8999999999888777665442 368899999999998877764
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 81 ~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp HHHHCCCSEEEECCCCC
T ss_pred HHHhCCCCEEEeccccc
Confidence 799999999854
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.07 E-value=9.3e-10 Score=103.60 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=67.9
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecCchhH-----HHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRNREKG-----AAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~-----~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
++++++++||||+ |+||+++++.|+++ |++|++.+|+.++. +++.+..+.++.++++|++|.++++++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD 94 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence 4778999999999 89999999999997 89999998876443 33333445678899999999998888775
Q ss_pred ------CccEEEecCCCCC
Q 014177 108 ------DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ------~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 95 ~~~~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 95 VVADFGQIDAFIANAGATA 113 (267)
T ss_dssp HHHHTSCCSEEEECCCCCC
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 6799999998653
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.06 E-value=2e-10 Score=107.76 Aligned_cols=74 Identities=20% Similarity=0.261 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.++++ .+.++++|++|.++++++++ +
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~--------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGEPPE--------GFLAVKCDITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCT--------TSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHhhc--------cceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 366789999999999999999999997 899999999876542 36889999999998887775 4
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|+|||+||..
T Consensus 88 iD~lv~nAg~~ 98 (253)
T 2nm0_A 88 VEVLIANAGVT 98 (253)
T ss_dssp CSEEEEECSCC
T ss_pred CCEEEECCCCC
Confidence 79999999864
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.1e-10 Score=105.88 Aligned_cols=75 Identities=23% Similarity=0.207 Sum_probs=63.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
..+++|+++||||+|+||+++++.|+++ |++|++.+|+.+++++ +..+++|++|.++++++++
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~~~~g 80 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKG--------LFGVEVDVTDSDAVDRAFTAVEEHQG 80 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTT--------SEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHH--------hcCeeccCCCHHHHHHHHHHHHHHcC
Confidence 3477899999999999999999999997 8999999998775432 2348899999998887765
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 81 ~id~lv~~Ag~~ 92 (247)
T 1uzm_A 81 PVEVLVSNAGLS 92 (247)
T ss_dssp SCSEEEEECSCC
T ss_pred CCCEEEECCCCC
Confidence 689999999864
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=3.3e-10 Score=104.83 Aligned_cols=74 Identities=20% Similarity=0.224 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------- 107 (429)
|++|+++||||+|+||+++++.|+++ |++|++.+|+.++.+ ....++++|++|.++++++++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g 71 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGS 71 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCccccc-------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 35688999999999999999999997 899999999887532 235677899999988877764
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 72 ~id~lv~~Ag~~ 83 (236)
T 1ooe_A 72 QVDGVFCVAGGW 83 (236)
T ss_dssp CEEEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 799999999854
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=3.9e-10 Score=110.74 Aligned_cols=83 Identities=17% Similarity=0.278 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-------HHHHHHH---hCCCcEEEEeeCCChHHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-------GAAMVST---LGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-------~~~l~~~---l~~~v~~~~~Dl~d~~~l~~ 104 (429)
.++++|+++||||+|+||+++++.|+++ |++|++++|+.++ ++...++ .+.++.++++|++|.+++++
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 3477899999999999999999999997 8999999998764 3333332 33568889999999998888
Q ss_pred Hhc-------CccEEEecCCCC
Q 014177 105 ALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 105 ~~~-------~~DvVi~~agp~ 119 (429)
+++ ++|+||||||..
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 776 799999999854
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.1e-10 Score=106.11 Aligned_cols=84 Identities=23% Similarity=0.298 Sum_probs=59.8
Q ss_pred ccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCC-ChHHHHHHh
Q 014177 28 LDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY-NEGSLLMAL 106 (429)
Q Consensus 28 ~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~-d~~~l~~~~ 106 (429)
++.++.+..+++|+++||||+|+||+++++.|+++ |++|++.+|+.+.+++ + +++.++ +|+. +.+.+.+.+
T Consensus 8 ~~~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~----~-~~~~~~-~D~~~~~~~~~~~~ 79 (249)
T 1o5i_A 8 HHHHHMELGIRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKR----S-GHRYVV-CDLRKDLDLLFEKV 79 (249)
T ss_dssp --------CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHH----T-CSEEEE-CCTTTCHHHHHHHS
T ss_pred hhhhhHHhccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHh----h-CCeEEE-eeHHHHHHHHHHHh
Confidence 34445667788999999999999999999999997 8999999999754433 3 246666 9993 233444444
Q ss_pred cCccEEEecCCCC
Q 014177 107 RDVDLVVHAAGPF 119 (429)
Q Consensus 107 ~~~DvVi~~agp~ 119 (429)
.++|+|||+||..
T Consensus 80 ~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 80 KEVDILVLNAGGP 92 (249)
T ss_dssp CCCSEEEECCCCC
T ss_pred cCCCEEEECCCCC
Confidence 4899999999854
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.4e-10 Score=106.34 Aligned_cols=80 Identities=30% Similarity=0.279 Sum_probs=58.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHH---HHh---cCc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL---MAL---RDV 109 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~---~~~---~~~ 109 (429)
++++|+++||||+|+||+++++.|++ +..|++.+|+.++++.+.+ . .++.++.+|++|.+... +.+ .++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~~~~~~~~-~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAE-I-EGVEPIESDIVKEVLEEGGVDKLKNLDHV 76 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHT-S-TTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHh-h-cCCcceecccchHHHHHHHHHHHHhcCCC
Confidence 36678999999999999999999976 5789999999988887765 2 46888999998874421 122 278
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+|||+||...
T Consensus 77 d~lv~~Ag~~~ 87 (245)
T 3e9n_A 77 DTLVHAAAVAR 87 (245)
T ss_dssp SEEEECC----
T ss_pred CEEEECCCcCC
Confidence 99999998653
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=7.9e-10 Score=102.64 Aligned_cols=74 Identities=20% Similarity=0.221 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------- 107 (429)
.++|+++||||+|+||+++++.|+++ |++|++.+|+.++.+ ....++++|++|.++++++++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g 75 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ 75 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhhcc-------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 45689999999999999999999997 899999999876532 235677899999988887765
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+||||||..
T Consensus 76 ~iD~lv~~Ag~~ 87 (241)
T 1dhr_A 76 KVDAILCVAGGW 87 (241)
T ss_dssp CEEEEEECCCCC
T ss_pred CCCEEEEccccc
Confidence 789999999854
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.99 E-value=4e-10 Score=104.52 Aligned_cols=73 Identities=25% Similarity=0.361 Sum_probs=60.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~Dv 111 (429)
+|+++||||+|+||+++++.|+++ |++|++.+|+.++. .++++ +..+++|++| ++++++++ ++|+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~---~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~ 73 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEEA---AQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHV 73 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHH---HHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHH---HHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence 578999999999999999999997 89999999998763 33342 7889999999 66665543 7999
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
|||+||..
T Consensus 74 lv~~Ag~~ 81 (239)
T 2ekp_A 74 LVHAAAVN 81 (239)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999854
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=101.82 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|+++||||+|+||+++++.|+++ |++|++. +|+.+++++..+++ +.++..+.+|++|.++++++++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 56799999999999999999999997 7888885 67777766665544 2457789999999988877765
Q ss_pred --------CccEEEecCCCC
Q 014177 108 --------DVDLVVHAAGPF 119 (429)
Q Consensus 108 --------~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 83 ~~~~~~~~~id~lv~nAg~~ 102 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIG 102 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCC
T ss_pred hcccccCCcccEEEECCCCC
Confidence 299999999864
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=101.91 Aligned_cols=75 Identities=19% Similarity=0.250 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----CccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~Dv 111 (429)
.++|+++||||+|+||+++++.|+++ .++.|++.+|+.+.. ...+.++++|++|.++++++++ ++|+
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~-~g~~v~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~ 73 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQN-KNHTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLDIIKNVSFDG 73 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTS-TTEEEEEEESSCCCC-------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEE
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhc-CCcEEEEeccccccc-------cccceEEecCcCCHHHHHHHHHHHHhCCCCE
Confidence 35689999999999999999999983 278999999886521 1357889999999999988876 7899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
+||+||..
T Consensus 74 lv~nAg~~ 81 (244)
T 4e4y_A 74 IFLNAGIL 81 (244)
T ss_dssp EEECCCCC
T ss_pred EEECCccC
Confidence 99999864
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-09 Score=103.31 Aligned_cols=82 Identities=22% Similarity=0.291 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++++++||||+|+||+++++.|+++ |++|++.+|+.++++++.+.+. .++.++++|++|.++++++++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999997 8999999999888776655543 247789999999998888775
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|+|||+||...
T Consensus 83 ~~g~id~lv~~Ag~~~ 98 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNN 98 (267)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HcCCCCEEEECCCCCC
Confidence 5799999998653
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.9e-10 Score=107.41 Aligned_cols=75 Identities=21% Similarity=0.224 Sum_probs=61.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||+|+||+++++.|+++ |++|++.+|+.+.++ .....++|++|.+++.++++ +
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~--------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 94 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAGIA--------ADLHLPGDLREAAYADGLPGAVAAGLGR 94 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTTSC--------CSEECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--------hhhccCcCCCCHHHHHHHHHHHHHhcCC
Confidence 356789999999999999999999997 899999999876542 22445789999988777654 7
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|+|||+||...
T Consensus 95 iD~lvnnAg~~~ 106 (266)
T 3uxy_A 95 LDIVVNNAGVIS 106 (266)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 999999998654
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=4.6e-09 Score=107.71 Aligned_cols=143 Identities=22% Similarity=0.237 Sum_probs=97.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch---hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhcCc-
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE---KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALRDV- 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~---~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~~~- 109 (429)
.++++|||||+|+||+++++.|+++ |+ +|++.+|+.. .++++.+++ +.++.++.+|++|.+++.++++++
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 4589999999999999999999998 67 5999999864 344444333 346889999999999999988754
Q ss_pred -----cEEEecCCCCCC-------------------CchHHHHHHHHHcCCcEEEeCCCh-hHHHHHHhhHHHHHHcCCc
Q 014177 110 -----DLVVHAAGPFQQ-------------------APKCTVLEAAIETKTAYIDVCDDT-IYSQRAKSFKDRAIAANIP 164 (429)
Q Consensus 110 -----DvVi~~agp~~~-------------------~~~~~v~~aa~~~gv~~vdis~~~-~~~~~~~~~~~~a~~~g~~ 164 (429)
|+|||+||.... .+..++.+++.+.+...|.+.++. .+ .|.+
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~-------------~g~~ 369 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASA-------------FGAP 369 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHH-------------TCCT
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhc-------------CCCC
Confidence 999999986432 123344555555444443222221 11 0100
Q ss_pred EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 165 AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 165 ~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
.-..|+.+|.+.+.+++.+. ..+.++..++.
T Consensus 370 ----g~~~Yaaaka~l~~la~~~~-~~gi~v~~i~p 400 (486)
T 2fr1_A 370 ----GLGGYAPGNAYLDGLAQQRR-SDGLPATAVAW 400 (486)
T ss_dssp ----TCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEE
T ss_pred ----CCHHHHHHHHHHHHHHHHHH-hcCCeEEEEEC
Confidence 01358999999988887665 45666666654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=103.30 Aligned_cols=75 Identities=27% Similarity=0.428 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||++.||+++++.|++. |++|++.+|+.+.. + .....+++|++|.++++++++ +
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~------~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 78 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLEL--GAQVLTTARARPEG------L-PEELFVEADLTTKEGCAIVAEATRQRLGG 78 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCCTT------S-CTTTEEECCTTSHHHHHHHHHHHHHHTSS
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCchhC------C-CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478899999999999999999999998 89999999976531 1 234578999999998877765 6
Q ss_pred ccEEEecCCCC
Q 014177 109 VDLVVHAAGPF 119 (429)
Q Consensus 109 ~DvVi~~agp~ 119 (429)
+|++||+||..
T Consensus 79 iDilVnnAG~~ 89 (261)
T 4h15_A 79 VDVIVHMLGGS 89 (261)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999999853
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.2e-09 Score=98.32 Aligned_cols=64 Identities=27% Similarity=0.404 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi 113 (429)
+++|+++||||+|+||+++++.|+++ |++|++.+|+.+ +|++|.++++++++ ++|++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~-----------------~D~~~~~~v~~~~~~~g~id~lv 64 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG-----------------LDISDEKSVYHYFETIGAFDHLI 64 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT-----------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc-----------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence 56789999999999999999999987 899999998754 79999999888876 799999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
||||..
T Consensus 65 ~nAg~~ 70 (223)
T 3uce_A 65 VTAGSY 70 (223)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 999865
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.5e-09 Score=101.46 Aligned_cols=137 Identities=15% Similarity=0.034 Sum_probs=90.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcC----ccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRD----VDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~----~DvVi~ 114 (429)
||+++||||+|+||+++++.|+++ |++|++.+|+.++++. . +++|++|.+++++++++ +|+|||
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~---------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~ 68 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIA---------D-LSTAEGRKQAIADVLAKCSKGMDGLVL 68 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC---------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhhcc---------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence 478999999999999999999997 8999999998765321 1 56899999999888764 599999
Q ss_pred cCCCCC-C-----------CchHHHHHHHH----HcC-CcEEEeCCChhHHH--------H---HHhhHH---HHHH-cC
Q 014177 115 AAGPFQ-Q-----------APKCTVLEAAI----ETK-TAYIDVCDDTIYSQ--------R---AKSFKD---RAIA-AN 162 (429)
Q Consensus 115 ~agp~~-~-----------~~~~~v~~aa~----~~g-v~~vdis~~~~~~~--------~---~~~~~~---~a~~-~g 162 (429)
|||... . .+...+.++++ +.+ .+.|.+++...+.. . ...... .... .+
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T 1fjh_A 69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGE 148 (257)
T ss_dssp CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCT
T ss_pred CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccC
Confidence 998654 1 13345566665 333 35566766544410 0 000000 0000 11
Q ss_pred CcEEecCCCccchhHHHHHHHHHHHHhhc
Q 014177 163 IPAITTGGIYPGVSNVMAAELVRVARNES 191 (429)
Q Consensus 163 ~~~i~~~g~~pG~s~~~a~~~~~~~~~~~ 191 (429)
.+ ....|+.||.....+++.+..++
T Consensus 149 ~~----~~~~Y~~sK~a~~~~~~~la~e~ 173 (257)
T 1fjh_A 149 QG----GNLAYAGSKNALTVAVRKRAAAW 173 (257)
T ss_dssp TH----HHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CC----CccHHHHHHHHHHHHHHHHHHHH
Confidence 10 11348999999988888776553
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.91 E-value=5.2e-10 Score=108.98 Aligned_cols=79 Identities=20% Similarity=0.129 Sum_probs=62.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH---HHHHHh------CCCcEEEEeeCCChHHHHHHhcC-
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA---AMVSTL------GKNSEFAEVNIYNEGSLLMALRD- 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~---~l~~~l------~~~v~~~~~Dl~d~~~l~~~~~~- 108 (429)
+++|+||||+|+||+++++.|+++ |++|++++|+..+++ +..+.. +.++.++++|++|.++++++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~--G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV 79 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 478999999999999999999997 788887777554332 222222 24688999999999999988874
Q ss_pred ----ccEEEecCCCC
Q 014177 109 ----VDLVVHAAGPF 119 (429)
Q Consensus 109 ----~DvVi~~agp~ 119 (429)
+|+||||||..
T Consensus 80 ~~g~iD~lVnnAG~~ 94 (327)
T 1jtv_A 80 TEGRVDVLVCNAGLG 94 (327)
T ss_dssp TTSCCSEEEECCCCC
T ss_pred hcCCCCEEEECCCcC
Confidence 89999999854
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.8e-09 Score=108.16 Aligned_cols=81 Identities=25% Similarity=0.369 Sum_probs=66.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch---hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhcC--
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE---KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALRD-- 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~---~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~~-- 108 (429)
.++++|||||+|+||+++++.|.++ |+ +|++.+|+.. .++++.+++ +.++.++.+|++|.+++.+++++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 4589999999999999999999987 67 6889999863 344444433 34588899999999999999874
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|+||||||...
T Consensus 336 ld~VVh~AGv~~ 347 (511)
T 2z5l_A 336 PNAVFHTAGILD 347 (511)
T ss_dssp CSEEEECCCCCC
T ss_pred CcEEEECCcccC
Confidence 999999998653
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.90 E-value=4.8e-10 Score=115.99 Aligned_cols=146 Identities=17% Similarity=0.112 Sum_probs=94.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+|+||||||+||||+++++.|+++ |++|++.+|+..+. +.+.+|+.+. +.+.++++|+|||||+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~~-----------~~v~~d~~~~--~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPKP-----------GKRFWDPLNP--ASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCCT-----------TCEECCTTSC--CTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCCc-----------cceeecccch--hHHhcCCCCEEEECCCC
Confidence 689999999999999999999997 89999999987652 2366787653 45677899999999986
Q ss_pred CCC----------------CchHHHHHH-HHHcCCc-EEEeCCChhHHHHH--HhhHHHHHHcCCcEEecCCCccchhHH
Q 014177 119 FQQ----------------APKCTVLEA-AIETKTA-YIDVCDDTIYSQRA--KSFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 119 ~~~----------------~~~~~v~~a-a~~~gv~-~vdis~~~~~~~~~--~~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
... .++.+++++ |.+.++. +|.+|+...|.... ..+.+. .+. ....|+.++.
T Consensus 212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~-----~~~---~~~~y~~~~~ 283 (516)
T 3oh8_A 212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEE-----SES---GDDFLAEVCR 283 (516)
T ss_dssp -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTT-----SCC---CSSHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCC-----CCC---CcChHHHHHH
Confidence 421 135678888 5666764 45666544432000 011111 010 1123555666
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 179 MAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
..+.++..+. ..+.++..+|. .+.+|++.
T Consensus 284 ~~E~~~~~~~-~~gi~~~ilRp-~~v~Gp~~ 312 (516)
T 3oh8_A 284 DWEHATAPAS-DAGKRVAFIRT-GVALSGRG 312 (516)
T ss_dssp HHHHTTHHHH-HTTCEEEEEEE-CEEEBTTB
T ss_pred HHHHHHHHHH-hCCCCEEEEEe-eEEECCCC
Confidence 5565554332 45778888998 45688763
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=7.5e-09 Score=100.35 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=63.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe---------cCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS---------RNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~---------R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
++.+|+++||||+|+||+++++.|+++ |++|++.+ |+.++++.+.+++........+|+.|.+++++++
T Consensus 6 ~l~gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~ 83 (319)
T 1gz6_A 6 RFDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV 83 (319)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHH
Confidence 467899999999999999999999997 89999964 4666776665554311223468999988766554
Q ss_pred c-------CccEEEecCCCC
Q 014177 107 R-------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-------~~DvVi~~agp~ 119 (429)
+ ++|+|||+||..
T Consensus 84 ~~~~~~~g~iD~lVnnAG~~ 103 (319)
T 1gz6_A 84 KTALDTFGRIDVVVNNAGIL 103 (319)
T ss_dssp HHHHHHTSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 3 799999999854
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.89 E-value=2.8e-08 Score=100.97 Aligned_cols=85 Identities=12% Similarity=0.171 Sum_probs=67.8
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.....+.+++++||||+|.||+++++.|+++ |++|++.+|+.. .++++.+.. ++.++++|++|.++++++++
T Consensus 206 ~~~~~l~gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~ 281 (454)
T 3u0b_A 206 DWDKPLDGKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVADKV--GGTALTLDVTADDAVDKITAHV 281 (454)
T ss_dssp CTTSTTTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHH
Confidence 3444567899999999999999999999997 889999998643 344444444 36789999999998887765
Q ss_pred -----C-ccEEEecCCCCC
Q 014177 108 -----D-VDLVVHAAGPFQ 120 (429)
Q Consensus 108 -----~-~DvVi~~agp~~ 120 (429)
+ +|+||||||...
T Consensus 282 ~~~~g~~id~lV~nAGv~~ 300 (454)
T 3u0b_A 282 TEHHGGKVDILVNNAGITR 300 (454)
T ss_dssp HHHSTTCCSEEEECCCCCC
T ss_pred HHHcCCCceEEEECCcccC
Confidence 3 999999998653
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=6e-09 Score=99.46 Aligned_cols=106 Identities=17% Similarity=0.176 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++++++|+||+|++|+++++.|++. |++|++++|+.++++++.+++. .++.++.+|++|.+++.++++++|+||
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~--G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 467899999999999999999999997 7889999999988887776542 145678899999999999999999999
Q ss_pred ecCCCCCCCchHHHHHHHH-HcCCcEEEeCCCh
Q 014177 114 HAAGPFQQAPKCTVLEAAI-ETKTAYIDVCDDT 145 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~-~~gv~~vdis~~~ 145 (429)
||+|..... .++.+... +.....+|++...
T Consensus 194 n~ag~g~~~--~~~~~~~~~~~~~~~~dvn~~~ 224 (287)
T 1lu9_A 194 TAGAIGLEL--LPQAAWQNESSIEIVADYNAQP 224 (287)
T ss_dssp ECCCTTCCS--BCHHHHTTCTTCCEEEECCCSS
T ss_pred ECCCccccC--CChhHcCchHHHHHHHHhhhhh
Confidence 999743211 12222222 3344456666443
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.8e-09 Score=103.32 Aligned_cols=80 Identities=24% Similarity=0.242 Sum_probs=58.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
||||||||+||||+++++.|+++ |++|++..|++.+. . +..| +...+.++++|.|||+|+..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~~---------~---~~~~----~~~~~~l~~~d~vihla~~~ 62 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGPG---------R---ITWD----ELAASGLPSCDAAVNLAGEN 62 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTT---------E---EEHH----HHHHHCCCSCSEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCcC---------e---eecc----hhhHhhccCCCEEEEeccCc
Confidence 68999999999999999999998 89999999986531 1 2222 22345678999999999732
Q ss_pred CC-------------------CchHHHHHHHHHcCCc
Q 014177 120 QQ-------------------APKCTVLEAAIETKTA 137 (429)
Q Consensus 120 ~~-------------------~~~~~v~~aa~~~gv~ 137 (429)
.. .++.+++++|.+.+.+
T Consensus 63 i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~ 99 (298)
T 4b4o_A 63 ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQP 99 (298)
T ss_dssp SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCC
Confidence 11 1244567777777654
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.7e-09 Score=99.84 Aligned_cols=77 Identities=13% Similarity=0.034 Sum_probs=56.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH--HhCCCcEEEEeeCCChHHHHHH----hcCccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS--TLGKNSEFAEVNIYNEGSLLMA----LRDVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~--~l~~~v~~~~~Dl~d~~~l~~~----~~~~DvV 112 (429)
||+++||||+|+||+++++.|+++ |++|++.+|+.++++.+.+ ..+.++..+ |..+.+.+.+. +.++|+|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~l 76 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVL 76 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence 478999999999999999999997 8999999999887766543 112334333 55554432222 2379999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
||+||..
T Consensus 77 v~nAg~~ 83 (254)
T 1zmt_A 77 VSNDIFA 83 (254)
T ss_dssp EEECCCC
T ss_pred EECCCcC
Confidence 9999865
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.8e-08 Score=101.85 Aligned_cols=79 Identities=30% Similarity=0.434 Sum_probs=64.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc---hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR---EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~---~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|||||+|+||.++++.|+++ |+ .|++.+|+. +.++++.+++ +.++.++.+|++|.+++.++++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~ 316 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE 316 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred CCEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 489999999999999999999997 66 788888863 3344444433 4568899999999999998886
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
++|+|||+||..
T Consensus 317 ~g~ld~vVh~AGv~ 330 (496)
T 3mje_A 317 DAPLTAVFHSAGVA 330 (496)
T ss_dssp TSCEEEEEECCCCC
T ss_pred hCCCeEEEECCccc
Confidence 489999999865
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.6e-08 Score=104.55 Aligned_cols=81 Identities=16% Similarity=0.233 Sum_probs=64.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEE-ecCc-------------hhHHHHHHHh---CCCcEEEEeeCCCh
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVG-SRNR-------------EKGAAMVSTL---GKNSEFAEVNIYNE 99 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~-~R~~-------------~~~~~l~~~l---~~~v~~~~~Dl~d~ 99 (429)
.++++|||||+|.||.++++.|+++ |.+ |++. +|+. ++++++.+++ +.++.++.+|++|.
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~--G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~ 327 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARD--GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA 327 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHH--TCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc--CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence 4589999999999999999999998 665 7777 8883 3444444433 45688999999999
Q ss_pred HHHHHHhc------CccEEEecCCCCC
Q 014177 100 GSLLMALR------DVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l~~~~~------~~DvVi~~agp~~ 120 (429)
+++.++++ .+|+||||||...
T Consensus 328 ~~v~~~~~~i~~~g~id~vVh~AGv~~ 354 (525)
T 3qp9_A 328 EAAARLLAGVSDAHPLSAVLHLPPTVD 354 (525)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcCCC
Confidence 99998886 4699999998653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.69 E-value=2.7e-07 Score=85.54 Aligned_cols=76 Identities=14% Similarity=0.060 Sum_probs=56.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-e--cCchhHHHHHHHhCCCcEEEEeeCCChHHHH-HHh---cCccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-S--RNREKGAAMVSTLGKNSEFAEVNIYNEGSLL-MAL---RDVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~--R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~-~~~---~~~Dv 111 (429)
+|+++||||+|+||+++++.|+++ |++|++. + |+.++++.+.+++ ...+.. |..+.+.+. ++. .++|+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~ 75 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESEN-PGTIAL--AEQKPERLVDATLQHGEAIDT 75 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHHHHHHHHHHh-CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence 478999999999999999999997 8999999 6 9998888877765 222222 554443332 222 37899
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
|||+||..
T Consensus 76 lv~~Ag~~ 83 (244)
T 1zmo_A 76 IVSNDYIP 83 (244)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
Confidence 99999854
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.68 E-value=4.8e-09 Score=110.63 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=60.6
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec---------CchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR---------NREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R---------~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
...++.+|.++||||+|+||+++++.|+++ |++|++.+| +.++++.+.+++........+|+.|.++++
T Consensus 13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~ 90 (613)
T 3oml_A 13 GKLRYDGRVAVVTGAGAGLGREYALLFAER--GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGA 90 (613)
T ss_dssp --CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHH
Confidence 334578899999999999999999999998 899999987 666777666655322223458999998887
Q ss_pred HHhc-------CccEEEecCCCC
Q 014177 104 MALR-------DVDLVVHAAGPF 119 (429)
Q Consensus 104 ~~~~-------~~DvVi~~agp~ 119 (429)
++++ ++|++|||||..
T Consensus 91 ~~~~~~~~~~g~iDiLVnnAGi~ 113 (613)
T 3oml_A 91 KVIETAIKAFGRVDILVNNAGIL 113 (613)
T ss_dssp HHHC----------CEECCCCCC
T ss_pred HHHHHHHHHCCCCcEEEECCCCC
Confidence 7765 689999999864
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.66 E-value=3.1e-07 Score=77.55 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ 115 (429)
+++++|+|+|+ |.+|+.+++.|.+. |++|++.++++++.+.+.+ ..+.++.+|.+|.+.+.++ ++++|+||.+
T Consensus 4 ~~~~~v~I~G~-G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 4 NGRYEYIVIGS-EAAGVGLVRELTAA--GKKVLAVDKSKEKIELLED---EGFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH---TTCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHH---CCCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 34678999995 99999999999997 8999999999998887765 2478899999999988776 4589999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
.+... .+..+...+.+.+..++
T Consensus 78 ~~~~~--~n~~~~~~a~~~~~~~i 99 (141)
T 3llv_A 78 GSDDE--FNLKILKALRSVSDVYA 99 (141)
T ss_dssp CSCHH--HHHHHHHHHHHHCCCCE
T ss_pred cCCHH--HHHHHHHHHHHhCCceE
Confidence 87321 22456667777775544
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=9.5e-08 Score=80.48 Aligned_cols=98 Identities=27% Similarity=0.275 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ 115 (429)
+++++|+|+|+ |.+|+.+++.|.+. +++|++.++++++.+.+.+ .....+..|..|.+.+.++ ++++|+||++
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRM--GHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTT---TCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 45678999997 99999999999987 7899999999877655432 2346778899998888776 6789999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
++.... .+..+.+.+.+.+.+++..
T Consensus 78 ~~~~~~-~~~~~~~~~~~~~~~~ii~ 102 (144)
T 2hmt_A 78 IGANIQ-ASTLTTLLLKELDIPNIWV 102 (144)
T ss_dssp CCSCHH-HHHHHHHHHHHTTCSEEEE
T ss_pred CCCchH-HHHHHHHHHHHcCCCeEEE
Confidence 875311 1246677788888876544
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.5e-07 Score=98.24 Aligned_cols=81 Identities=31% Similarity=0.466 Sum_probs=66.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHh-HcCCCc-eEEEEecC---chhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc--
Q 014177 38 RNARVLVLGGTGRVGGSTAVALS-KLCPDL-QIVVGSRN---REKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~-~~~~g~-~v~v~~R~---~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.++.++|+||+|.+|+.+++.|+ ++ |+ +|++.+|+ .++++++.+++ +.++.++++|++|.++++++++
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~ 606 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIER--GVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI 606 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTS--SCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cccceeeccCCCCcHHHHHHHHHHHc--CCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 46899999999999999999999 65 77 59999998 44555555544 3468899999999999998876
Q ss_pred ----CccEEEecCCCCC
Q 014177 108 ----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ----~~DvVi~~agp~~ 120 (429)
.+|+|||+||...
T Consensus 607 ~~~~~id~lVnnAGv~~ 623 (795)
T 3slk_A 607 PDEHPLTAVVHAAGVLD 623 (795)
T ss_dssp CTTSCEEEEEECCCCCC
T ss_pred HHhCCCEEEEECCCcCC
Confidence 4799999998653
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.56 E-value=4.4e-07 Score=77.92 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=89.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~ 114 (429)
|..++|+|+| +|.+|+.+++.|.+. +++|++++++ .++.+.+.+.....+.++.+|.+|.+.+.++ ++++|+||.
T Consensus 1 ~~~~~vlI~G-~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 1 HRKDHFIVCG-HSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CCCSCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 3457899999 599999999999987 7899999998 4666666655555688999999999998887 889999999
Q ss_pred cCCCCCCCchHHHHHHHHHc-CCcEE-EeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 115 AAGPFQQAPKCTVLEAAIET-KTAYI-DVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~-gv~~v-dis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
+.+... .+..+...+.+. +..++ -...+..+. +..++.|+..++. .....+..+++.
T Consensus 78 ~~~~d~--~n~~~~~~a~~~~~~~~ii~~~~~~~~~-------~~l~~~G~~~vi~------p~~~~~~~l~~~ 136 (153)
T 1id1_A 78 LSDNDA--DNAFVVLSAKDMSSDVKTVLAVSDSKNL-------NKIKMVHPDIILS------PQLFGSEILARV 136 (153)
T ss_dssp CSSCHH--HHHHHHHHHHHHTSSSCEEEECSSGGGH-------HHHHTTCCSEEEC------HHHHHHHHHHHH
T ss_pred ecCChH--HHHHHHHHHHHHCCCCEEEEEECCHHHH-------HHHHHcCCCEEEc------HHHHHHHHHHHH
Confidence 876432 124555666665 54444 333344332 2234456654332 244555555543
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.52 E-value=1.7e-06 Score=72.36 Aligned_cols=94 Identities=17% Similarity=0.144 Sum_probs=71.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
+|+|+|+|+ |.+|+.+++.|.+. +++|++.+|++++.+.+.+.. .+..+..|..+.+.+.+. ++++|+||++.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhc--CcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 368999985 99999999999987 789999999998887776543 356778899988877655 678999999986
Q ss_pred CCCCCchHHHHHHHHHcCCcEE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~v 139 (429)
.... ...+.+.+.+.+...+
T Consensus 79 ~~~~--~~~~~~~~~~~~~~~i 98 (140)
T 1lss_A 79 KEEV--NLMSSLLAKSYGINKT 98 (140)
T ss_dssp CHHH--HHHHHHHHHHTTCCCE
T ss_pred CchH--HHHHHHHHHHcCCCEE
Confidence 4321 2345566777675543
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.45 E-value=7.9e-07 Score=86.42 Aligned_cols=150 Identities=10% Similarity=0.062 Sum_probs=88.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-------eEEEEecC----chhHHHHHHHhCCC-cEEEEeeCCChHHHHHHh
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-------QIVVGSRN----REKGAAMVSTLGKN-SEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-------~v~v~~R~----~~~~~~l~~~l~~~-v~~~~~Dl~d~~~l~~~~ 106 (429)
++||+|+||+|++|+.++..|+.. +. +|++.|++ .++++..+..+... ..+ ..|+....++.+++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al 81 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAF 81 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHh
Confidence 468999999999999999999875 43 89999998 55555433333221 111 23555445577889
Q ss_pred cCccEEEecCCCCCCC-------------chHHHHHHHHHcC-Cc--EEEeCCChhHHHHHHhhHHHHHHc-CCcEEecC
Q 014177 107 RDVDLVVHAAGPFQQA-------------PKCTVLEAAIETK-TA--YIDVCDDTIYSQRAKSFKDRAIAA-NIPAITTG 169 (429)
Q Consensus 107 ~~~DvVi~~agp~~~~-------------~~~~v~~aa~~~g-v~--~vdis~~~~~~~~~~~~~~~a~~~-g~~~i~~~ 169 (429)
+++|+|||+||..... ...++++++.+.+ .+ .+.++ ++.-.-.. .. .+.. |.+- .
T Consensus 82 ~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S-NPv~~~t~-~~---~~~~~~~p~---~ 153 (329)
T 1b8p_A 82 KDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG-NPANTNAY-IA---MKSAPSLPA---K 153 (329)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS-SSHHHHHH-HH---HHTCTTSCG---G
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc-CchHHHHH-HH---HHHcCCCCH---H
Confidence 9999999999854321 1356778888874 54 34444 43221111 00 0111 2110 0
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
-.+|.+.+-...+...+.+..+.....++.
T Consensus 154 -~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~ 183 (329)
T 1b8p_A 154 -NFTAMLRLDHNRALSQIAAKTGKPVSSIEK 183 (329)
T ss_dssp -GEEECCHHHHHHHHHHHHHHHTCCGGGEES
T ss_pred -HEEEeecHHHHHHHHHHHHHhCcCHHHceE
Confidence 014455554555555555556666677773
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.44 E-value=1.1e-07 Score=100.04 Aligned_cols=81 Identities=19% Similarity=0.261 Sum_probs=58.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc---------hhHHHHHHHhCC-CcEEEEeeCCChHHHHHH
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR---------EKGAAMVSTLGK-NSEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~---------~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~ 105 (429)
++++|.++||||++.||+++++.|+++ |++|++.+|+. ++++++.+++.. ..+ ..+|+.|.++++++
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~ 81 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKI 81 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHH
Confidence 367899999999999999999999998 89999988765 556665554421 112 34677776433333
Q ss_pred -------hcCccEEEecCCCC
Q 014177 106 -------LRDVDLVVHAAGPF 119 (429)
Q Consensus 106 -------~~~~DvVi~~agp~ 119 (429)
+.++|++||+||..
T Consensus 82 v~~~~~~~G~iDiLVnNAGi~ 102 (604)
T 2et6_A 82 VETAVKNFGTVHVIINNAGIL 102 (604)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 23799999999854
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=6.1e-07 Score=85.66 Aligned_cols=37 Identities=24% Similarity=0.317 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcCC--hHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 36 KNRNARVLVLGGT--GRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 36 ~~~~~~VlV~Ga~--G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
++++|+++||||+ |+||+++++.|+++ |++|++.+|+
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~ 43 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWV 43 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEH
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeecc
Confidence 3677899999998 99999999999997 8999999875
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=6.7e-07 Score=76.96 Aligned_cols=108 Identities=15% Similarity=0.093 Sum_probs=72.1
Q ss_pred cccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH
Q 014177 25 ETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 25 ~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~ 104 (429)
.++|--++-++....++|+|+| +|.+|+.+++.|.+. +++|++++|++++++.+... .....+..|..+.+.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~v~IiG-~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~--~g~~~~~~d~~~~~~l~~ 79 (155)
T 2g1u_A 5 KIHHHHHHMSKKQKSKYIVIFG-CGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNSE--FSGFTVVGDAAEFETLKE 79 (155)
T ss_dssp ------------CCCCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCTT--CCSEEEESCTTSHHHHHT
T ss_pred chhhhhhhhhcccCCCcEEEEC-CCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHhc--CCCcEEEecCCCHHHHHH
Confidence 3556667778888899999999 499999999999987 78999999999887654311 235677789888877776
Q ss_pred H-hcCccEEEecCCCCCCCchHHHHHHHHH-cCCcEE
Q 014177 105 A-LRDVDLVVHAAGPFQQAPKCTVLEAAIE-TKTAYI 139 (429)
Q Consensus 105 ~-~~~~DvVi~~agp~~~~~~~~v~~aa~~-~gv~~v 139 (429)
. ++++|+||.+.+.... ...+.+.+.. .+...+
T Consensus 80 ~~~~~ad~Vi~~~~~~~~--~~~~~~~~~~~~~~~~i 114 (155)
T 2g1u_A 80 CGMEKADMVFAFTNDDST--NFFISMNARYMFNVENV 114 (155)
T ss_dssp TTGGGCSEEEECSSCHHH--HHHHHHHHHHTSCCSEE
T ss_pred cCcccCCEEEEEeCCcHH--HHHHHHHHHHHCCCCeE
Confidence 5 6789999999875321 2345555665 555554
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=84.74 Aligned_cols=138 Identities=9% Similarity=0.097 Sum_probs=93.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecC---chhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhcCc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRN---REKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~---~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
++.+++++|+|+ |.+|++++..|.+. |. +|++++|+ .++++++++++.. .......++.+.+++.+.+.++
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~--Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 227 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALD--GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAES 227 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTC
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHC--CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCC
Confidence 356799999997 67999999999997 77 89999999 8888888776531 2445567888877788888899
Q ss_pred cEEEecCCC--CCCCchHHH-HHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 110 DLVVHAAGP--FQQAPKCTV-LEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 110 DvVi~~agp--~~~~~~~~v-~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
|+|||+.+. .......++ ....+..+.-.+|+...+.. .++-..+++.|..++.| + .++..+.+..
T Consensus 228 DiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~----T~ll~~A~~~G~~~~~G------l-~MLv~Qa~~a 296 (315)
T 3tnl_A 228 VIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTK----TRLLEIAEEQGCQTLNG------L-GMMLWQGAKA 296 (315)
T ss_dssp SEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSS----CHHHHHHHHTTCEEECS------H-HHHHHHHHHH
T ss_pred CEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCC----CHHHHHHHHCCCeEeCc------H-HHHHHHHHHH
Confidence 999999742 111000122 12223344455788765532 24556778888775444 2 4566666655
Q ss_pred H
Q 014177 187 A 187 (429)
Q Consensus 187 ~ 187 (429)
+
T Consensus 297 f 297 (315)
T 3tnl_A 297 F 297 (315)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.8e-07 Score=85.92 Aligned_cols=125 Identities=19% Similarity=0.231 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|++.+|.|+| +|.+|+.+++.|.+ .++++++ ++|+++++++. .+ +.+ .++ +++.+. .++|+||.|
T Consensus 7 M~~irv~IIG-~G~iG~~~~~~l~~-~~~~elvav~d~~~~~~~~----~g--~~~--~~~---~~l~~~-~~~DvViia 72 (304)
T 3bio_A 7 DKKIRAAIVG-YGNIGRYALQALRE-APDFEIAGIVRRNPAEVPF----EL--QPF--RVV---SDIEQL-ESVDVALVC 72 (304)
T ss_dssp -CCEEEEEEC-CSHHHHHHHHHHHH-CTTEEEEEEECC-----------CC--TTS--CEE---SSGGGS-SSCCEEEEC
T ss_pred CCCCEEEEEC-ChHHHHHHHHHHhc-CCCCEEEEEEcCCHHHHHH----cC--CCc--CCH---HHHHhC-CCCCEEEEC
Confidence 4467999999 59999999999987 4688887 67888876543 21 211 122 223333 689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCC-hhHHHHHHhhHHHHHHcCCcEEecCCCccchhHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDD-TIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~-~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
.++... ...+..|+++|.+.++-..- .........+.+.+++.|....++.++.|+..++
T Consensus 73 tp~~~h---~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~ 133 (304)
T 3bio_A 73 SPSREV---ERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSV 133 (304)
T ss_dssp SCHHHH---HHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHH
T ss_pred CCchhh---HHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHH
Confidence 865443 67888999999999976432 3344455577778888898888888999997654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=7e-07 Score=86.11 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=33.5
Q ss_pred CCCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 36 KNRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 36 ~~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
++++|+++|||| +|+||+++++.|+++ |++|++.+|++
T Consensus 6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~~ 45 (315)
T 2o2s_A 6 DLRGQTAFVAGVADSHGYGWAIAKHLASA--GARVALGTWPP 45 (315)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHTT--TCEEEEEECHH
T ss_pred cCCCCEEEEeCCCCCCChHHHHHHHHHHC--CCEEEEEeccc
Confidence 367789999998 789999999999997 89999998753
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=9.5e-07 Score=87.25 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhH-cCCCceEEEEecCchhH---------------HHHHHHhCCCcEEEEeeCCChH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSK-LCPDLQIVVGSRNREKG---------------AAMVSTLGKNSEFAEVNIYNEG 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~-~~~g~~v~v~~R~~~~~---------------~~l~~~l~~~v~~~~~Dl~d~~ 100 (429)
..+|++|||||++.||.++++.|++ . |++|++.+|+.+.. .+..+..+.++..+.+|++|.+
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~--GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~ 122 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGC--GADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDE 122 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHH--CCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhc--CCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 3468999999999999999999999 8 89999998875432 2222334456788999999998
Q ss_pred HHHHHhc-------CccEEEecCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGP 118 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp 118 (429)
+++++++ ++|++||+||.
T Consensus 123 ~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 8877664 68999999975
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.35 E-value=9.7e-07 Score=87.89 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=63.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhH-cCCCceEEEEecCchhHH---------------HHHHHhCCCcEEEEeeCCChHH
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSK-LCPDLQIVVGSRNREKGA---------------AMVSTLGKNSEFAEVNIYNEGS 101 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~-~~~g~~v~v~~R~~~~~~---------------~l~~~l~~~v~~~~~Dl~d~~~ 101 (429)
.+|++|||||++.||+++++.|++ . |++|++++|+.+.++ +..+..+.++..+.+|++|.++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~--GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~ 137 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGF--GADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAA 137 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHH--CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhC--CCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHH
Confidence 478999999999999999999999 8 899999998765422 2233344567889999999987
Q ss_pred HHHHh--------cCccEEEecCCC
Q 014177 102 LLMAL--------RDVDLVVHAAGP 118 (429)
Q Consensus 102 l~~~~--------~~~DvVi~~agp 118 (429)
+++++ .++|++||+||.
T Consensus 138 v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 138 RAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp HHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 76654 468999999975
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.1e-06 Score=84.13 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=91.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.+++++|+|+ |.+|+.++..|.+. |. +|++++|+.++++++++.++.... ++.+.+++.+.+.++|+|||
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn 210 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIIN 210 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEE
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEE
Confidence 356789999996 67999999999987 76 999999999999999887653211 11233567777889999999
Q ss_pred cCCCCCC--CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 115 AAGPFQQ--APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 115 ~agp~~~--~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
|++.... .....+-..+++.+...+|++..+.. ..+.+.+++.|...+.| + .++..+.+..+.
T Consensus 211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P~~----T~ll~~A~~~G~~~v~G------l-~MLv~Qa~~af~ 275 (297)
T 2egg_A 211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNPLE----TKWLKEAKARGARVQNG------V-GMLVYQGALAFE 275 (297)
T ss_dssp CSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSSSS----CHHHHHHHHTTCEEECS------H-HHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCCCC----CHHHHHHHHCcCEEECC------H-HHHHHHHHHHHH
Confidence 9864321 00001112345567778999875432 13556778888876544 2 456666666554
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=8.5e-07 Score=85.59 Aligned_cols=101 Identities=20% Similarity=0.203 Sum_probs=66.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec--CchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR--NREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R--~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
+||+|+||+|++|+.++..|+.++...++.+.|+ +.++++.....+. ..+++...| +++.+.++++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence 4899999999999999999987632347899998 6655443222111 122222211 23556789999
Q ss_pred EEEecCCCCCCC-------------chHHHHHHHHHcCCcE-EEeCCCh
Q 014177 111 LVVHAAGPFQQA-------------PKCTVLEAAIETKTAY-IDVCDDT 145 (429)
Q Consensus 111 vVi~~agp~~~~-------------~~~~v~~aa~~~gv~~-vdis~~~ 145 (429)
+|||+||..... ...+++++|.+.+ +. +-+.+++
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNP 124 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNP 124 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCc
Confidence 999999854321 2457788888887 63 4444454
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.1e-06 Score=84.90 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=32.9
Q ss_pred CCCCCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 36 KNRNARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 36 ~~~~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
++.+|+++|||| +++||+++++.|+++ |++|++.+|+
T Consensus 6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~ 44 (319)
T 2ptg_A 6 DLRGKTAFVAGVADSNGYGWAICKLLRAA--GARVLVGTWP 44 (319)
T ss_dssp CCTTCEEEEECCCCTTSHHHHHHHHHHHT--TCEEEEEECH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEEEecc
Confidence 366789999998 799999999999997 8999999875
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.6e-06 Score=86.66 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=64.2
Q ss_pred CCCCeEEEEcCChHHHHH--HHHHHhHcCCCceEEEEecCchh---------------HHHHHHHhCCCcEEEEeeCCCh
Q 014177 37 NRNARVLVLGGTGRVGGS--TAVALSKLCPDLQIVVGSRNREK---------------GAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~--l~~~L~~~~~g~~v~v~~R~~~~---------------~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
..+|++|||||++.||.+ +++.|.+. |++|++++|+... +++..+..+.++..+++|++|.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~--Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGP--EAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSS--CCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhC--CCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence 567899999999999999 99999886 8999999986532 2233334445688899999999
Q ss_pred HHHHHHhc-------CccEEEecCCC
Q 014177 100 GSLLMALR-------DVDLVVHAAGP 118 (429)
Q Consensus 100 ~~l~~~~~-------~~DvVi~~agp 118 (429)
++++++++ ++|++||+||.
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 88877664 68999999975
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.3e-07 Score=89.45 Aligned_cols=150 Identities=17% Similarity=0.196 Sum_probs=86.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhH--HHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKG--AAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~--~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++++||+|+|++|.+|+.+++.+.+. ++++++ +++++.++. +.+.+..+ + ...++...++++++++++|+||
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~-~~~elva~~d~~~~~~~g~d~~~~~g--~--~~~~v~~~~dl~~~l~~~DvVI 77 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLLGSDAGELAG--A--GKTGVTVQSSLDAVKDDFDVFI 77 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTCSCCTTCSSS--S--SCCSCCEESCSTTTTTSCSEEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCchhhhhhhHHHHcC--C--CcCCceecCCHHHHhcCCCEEE
Confidence 45579999999999999999998874 688887 556655321 11100000 0 0011111122345566899999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHH-HHHHhhHHHHHHcCCcEEecCCCccchhHH--HHHHHHHHHHhh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYS-QRAKSFKDRAIAANIPAITTGGIYPGVSNV--MAAELVRVARNE 190 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~-~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~--~a~~~~~~~~~~ 190 (429)
+++.|... ...++.|+++|++.|--+. .+. .+...+.+.+ +..+++....++.|..-+ +++.+++.+..
T Consensus 78 Dft~p~~~---~~~~~~a~~~G~~vVigTt--G~~~e~~~~L~~~a--~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~- 149 (273)
T 1dih_A 78 DFTRPEGT---LNHLAFCRQHGKGMVIGTT--GFDEAGKQAIRDAA--ADIAIVFAANFSVGVNVMLKLLEKAAKVMGD- 149 (273)
T ss_dssp ECSCHHHH---HHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHT--TTSCEEECSCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred EcCChHHH---HHHHHHHHhCCCCEEEECC--CCCHHHHHHHHHhc--CCCCEEEEecCcHHHHHHHHHHHHHHHhcCC-
Confidence 99876533 7889999999999775332 121 1222343333 345677777777776421 23344433321
Q ss_pred cCCCCeEEEE
Q 014177 191 SKGEPERLRF 200 (429)
Q Consensus 191 ~~~~v~~i~~ 200 (429)
.-.++.+..
T Consensus 150 -~~dieiiE~ 158 (273)
T 1dih_A 150 -YTDIEIIEA 158 (273)
T ss_dssp -TSEEEEEEE
T ss_pred -CCCEEEEEe
Confidence 124556665
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.5e-05 Score=70.26 Aligned_cols=93 Identities=20% Similarity=0.133 Sum_probs=71.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH--hcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA--LRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~--~~~~DvVi 113 (429)
.+.+++|+|+| +|.+|+.+++.|.+.+ +++|+++++++++.+.+.+ ..+..+.+|.++.+.+.++ ++++|+||
T Consensus 36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~---~g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 36 NPGHAQVLILG-MGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRS---EGRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp CCTTCSEEEEC-CSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHH---TTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCCCCcEEEEC-CCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHH---CCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 35567899999 6999999999998741 4789999999998877654 2467788999998888877 77999999
Q ss_pred ecCCCCCCCchHHHHHHHHHcC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETK 135 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~g 135 (429)
.+.+... ....++..+.+.+
T Consensus 111 ~~~~~~~--~~~~~~~~~~~~~ 130 (183)
T 3c85_A 111 LAMPHHQ--GNQTALEQLQRRN 130 (183)
T ss_dssp ECCSSHH--HHHHHHHHHHHTT
T ss_pred EeCCChH--HHHHHHHHHHHHC
Confidence 9876422 1245566666666
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.28 E-value=8.5e-07 Score=99.14 Aligned_cols=82 Identities=17% Similarity=0.193 Sum_probs=66.6
Q ss_pred CCCCCeEEEEcCChH-HHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh-------CCCcEEEEeeCCChHHHHHHh
Q 014177 36 KNRNARVLVLGGTGR-VGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL-------GKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~-iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l-------~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
+++++++|||||+|. ||+++++.|++. |++|++. +|+.++++++.+++ +.++.++.+|++|.+++++++
T Consensus 473 sL~GKvALVTGASgGGIGrAIAr~LA~~--GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV 550 (1688)
T 2pff_A 473 TFKDKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 550 (1688)
T ss_dssp CCCSCCEEECSCSSSSTHHHHHHHHHHH--TCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHHC--cCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence 467789999999998 999999999998 8999987 67776665554444 235778999999999888775
Q ss_pred c-------------CccEEEecCCCC
Q 014177 107 R-------------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-------------~~DvVi~~agp~ 119 (429)
+ ++|+|||+||..
T Consensus 551 e~I~e~~~~~GfG~~IDILVNNAGI~ 576 (1688)
T 2pff_A 551 EFIYDTEKNGGLGWDLDAIIPFAAIP 576 (1688)
T ss_dssp HHHHSCTTSSSCCCCCCEEECCCCCC
T ss_pred HHHHHhccccccCCCCeEEEECCCcC
Confidence 3 489999999854
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.1e-05 Score=68.00 Aligned_cols=127 Identities=15% Similarity=0.122 Sum_probs=86.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
.++|+|+| +|.+|+.+++.|.+. |++|++.++++++.+.+.+ ..+..+.+|.++.+.+.++ ++++|+||.+.+
T Consensus 7 ~~~viIiG-~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVG-YGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRE---RGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH---TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH---cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 45799999 599999999999987 8999999999999887765 3578899999999888765 568999998876
Q ss_pred CCCCCchHHHHHHHHHc--CCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 118 PFQQAPKCTVLEAAIET--KTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~--gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
.... +..++..+.+. +++.+-...+..+. +..++.|+..++. ....++..+++.
T Consensus 81 ~~~~--n~~~~~~a~~~~~~~~iiar~~~~~~~-------~~l~~~G~d~vi~------p~~~~a~~i~~~ 136 (140)
T 3fwz_A 81 NGYE--AGEIVASARAKNPDIEIIARAHYDDEV-------AYITERGANQVVM------GEREIARTMLEL 136 (140)
T ss_dssp CHHH--HHHHHHHHHHHCSSSEEEEEESSHHHH-------HHHHHTTCSEEEE------HHHHHHHHHHHH
T ss_pred ChHH--HHHHHHHHHHHCCCCeEEEEECCHHHH-------HHHHHCCCCEEEC------chHHHHHHHHHH
Confidence 4321 12344555554 34444444444332 2334567654442 234455555543
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.8e-06 Score=99.24 Aligned_cols=82 Identities=17% Similarity=0.193 Sum_probs=66.8
Q ss_pred CCCCCeEEEEcCChH-HHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHh-------CCCcEEEEeeCCChHHHHHHh
Q 014177 36 KNRNARVLVLGGTGR-VGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTL-------GKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~-iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l-------~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
+++++.+|||||++. ||+++++.|++. |++|++. +|+.++++.+.+++ +.++.++.+|++|.+++++++
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~--GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv 749 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 749 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence 467899999999998 999999999997 8999988 57777765544333 345788999999999888765
Q ss_pred c-------------CccEEEecCCCC
Q 014177 107 R-------------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-------------~~DvVi~~agp~ 119 (429)
+ ++|+||||||..
T Consensus 750 ~~i~~~~~~~G~G~~LDiLVNNAGi~ 775 (1887)
T 2uv8_A 750 EFIYDTEKNGGLGWDLDAIIPFAAIP 775 (1887)
T ss_dssp HHHHSCTTTTSCCCCCSEEEECCCCC
T ss_pred HHHHHhccccccCCCCeEEEECCCcC
Confidence 3 489999999864
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2e-06 Score=98.70 Aligned_cols=82 Identities=16% Similarity=0.152 Sum_probs=65.8
Q ss_pred CCCCCeEEEEcCChH-HHHHHHHHHhHcCCCceEEEEe-cCchhHHHHH----HHh---CCCcEEEEeeCCChHHHHHHh
Q 014177 36 KNRNARVLVLGGTGR-VGGSTAVALSKLCPDLQIVVGS-RNREKGAAMV----STL---GKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~-iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~----~~l---~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
+++++++|||||+|. ||.++++.|++. |++|++.+ |+.++++... +++ +.++.++.+|++|.+++++++
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~--GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv 726 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSG--GAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV 726 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence 467799999999999 999999999997 89999985 6666654433 333 245788999999999888776
Q ss_pred c-----------CccEEEecCCCC
Q 014177 107 R-----------DVDLVVHAAGPF 119 (429)
Q Consensus 107 ~-----------~~DvVi~~agp~ 119 (429)
+ ++|+||||||..
T Consensus 727 ~~i~~~~~~~G~~IDiLVnNAGi~ 750 (1878)
T 2uv9_A 727 NYIYDTKNGLGWDLDYVVPFAAIP 750 (1878)
T ss_dssp HHHHCSSSSCCCCCSEEEECCCCC
T ss_pred HHHHHhhcccCCCCcEEEeCcccc
Confidence 3 489999999864
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.25 E-value=5.4e-07 Score=85.61 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=88.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
++.+++++|+|+ |.+|+.++..|.+. |. +|++++|+.++++++++.+. ..+.....+.. ++.+.++++|+
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~~~Di 197 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTH--GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIEDVIAAADG 197 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHHHHHHSSE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHhcCCE
Confidence 456799999997 67999999999997 66 79999999999988877654 12344444443 35667778999
Q ss_pred EEecCCC--CCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 112 VVHAAGP--FQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 112 Vi~~agp--~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
|||+... ..... .++-...+..+...+|+...+.. .++-..+++.|..++.| + .++..+.+..+.
T Consensus 198 VInaTp~Gm~~~~~-~pi~~~~l~~~~~v~DlvY~P~~----T~ll~~A~~~G~~~~~G------l-~MLv~Qa~~~f~ 264 (283)
T 3jyo_A 198 VVNATPMGMPAHPG-TAFDVSCLTKDHWVGDVVYMPIE----TELLKAARALGCETLDG------T-RMAIHQAVDAFR 264 (283)
T ss_dssp EEECSSTTSTTSCS-CSSCGGGCCTTCEEEECCCSSSS----CHHHHHHHHHTCCEECT------H-HHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCC-CCCCHHHhCCCCEEEEecCCCCC----CHHHHHHHHCcCeEeCc------H-HHHHHHHHHHHH
Confidence 9999842 11111 12222334455556788766532 24456677788776444 2 456666666543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.25 E-value=5.7e-07 Score=94.54 Aligned_cols=82 Identities=17% Similarity=0.251 Sum_probs=57.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHhCCCcEEEEeeC-CChHHH-HHH---hcCc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTLGKNSEFAEVNI-YNEGSL-LMA---LRDV 109 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l~~~v~~~~~Dl-~d~~~l-~~~---~~~~ 109 (429)
++++|.++||||++.||+++++.|+++ |++|++.+|+ .+...+.....+.++....+|+ .+.+.+ +++ +.++
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i 396 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKY--GAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI 396 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHC--CCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence 467789999999999999999999998 8999998863 2222211122233455667787 554432 222 3479
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||+||..
T Consensus 397 DiLVnNAGi~ 406 (604)
T 2et6_A 397 DILVNNAGIL 406 (604)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999864
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.2e-06 Score=82.68 Aligned_cols=134 Identities=12% Similarity=0.149 Sum_probs=85.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++++|+|+ |.+|+.+++.|.+. |.+|++++|+.++++++++.++..... +..+.+++.+ .++|+||||
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~~~~~---~~~~~~~~~~--~~~DivVn~ 187 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSI---QALSMDELEG--HEFDLIINA 187 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSE---EECCSGGGTT--CCCSEEEEC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhccCCe---eEecHHHhcc--CCCCEEEEC
Confidence 356789999997 66999999999997 689999999999998888766421112 2233333322 589999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc-EEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP-AITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~-~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
++........++-..++..+...+|+...... ..+...+++.|.. ++.| ..++..+.+..+.
T Consensus 188 t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~----t~~~~~a~~~G~~~~~~G-------~~mLv~Q~~~af~ 250 (271)
T 1nyt_A 188 TSSGISGDIPAIPSSLIHPGIYCYDMFYQKGK----TPFLAWCEQRGSKRNADG-------LGMLVAQAAHAFL 250 (271)
T ss_dssp CSCGGGTCCCCCCGGGCCTTCEEEESCCCSSC----CHHHHHHHHTTCCEEECT-------HHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeccCCcC----CHHHHHHHHcCCCeecCC-------HHHHHHHHHHHHH
Confidence 97432100001111223456777898765422 2344667788876 5433 3456666666544
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.22 E-value=7.2e-06 Score=74.53 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=73.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp 118 (429)
|+|+|+| +|.+|+.+++.|.+. +++|+++++++++.+.+.+.. ...++.+|.+|.+.+.++ ++++|+||.+.+.
T Consensus 1 M~iiIiG-~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~~~--~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 1 MKVIIIG-GETTAYYLARSMLSR--KYGVVIINKDRELCEEFAKKL--KATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHHS--SSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred CEEEEEC-CCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHc--CCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 5799999 599999999999987 789999999999988876554 467899999999988886 7799999988764
Q ss_pred CCCCchHHHHHHHHH-cCCcEEEe
Q 014177 119 FQQAPKCTVLEAAIE-TKTAYIDV 141 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~-~gv~~vdi 141 (429)
.. .+..+...+.+ .+..++..
T Consensus 76 d~--~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 76 DE--VNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HH--HHHHHHHHHHHTSCCCEEEE
T ss_pred cH--HHHHHHHHHHHHcCCCeEEE
Confidence 22 12344455555 56666543
|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=3.4e-05 Score=75.45 Aligned_cols=150 Identities=16% Similarity=0.169 Sum_probs=97.7
Q ss_pred cCCCCCCCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--C
Q 014177 33 FQMKNRNARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--D 108 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~ 108 (429)
....|++++|.|+| +|.+|+ ..++.|.+ .++++++ +++|++++++++++.++ +... .| ++++++ +
T Consensus 21 ~~~~m~~~rigiIG-~G~~g~~~~~~~l~~-~~~~~l~av~d~~~~~~~~~a~~~g--~~~~----~~---~~~ll~~~~ 89 (350)
T 3rc1_A 21 NPANANPIRVGVIG-CADIAWRRALPALEA-EPLTEVTAIASRRWDRAKRFTERFG--GEPV----EG---YPALLERDD 89 (350)
T ss_dssp -----CCEEEEEES-CCHHHHHTHHHHHHH-CTTEEEEEEEESSHHHHHHHHHHHC--SEEE----ES---HHHHHTCTT
T ss_pred CCCCCCceEEEEEc-CcHHHHHHHHHHHHh-CCCeEEEEEEcCCHHHHHHHHHHcC--CCCc----CC---HHHHhcCCC
Confidence 33446778999999 588998 78888887 4678876 67999999988887764 3322 23 445554 6
Q ss_pred ccEEEecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHH
Q 014177 109 VDLVVHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 109 ~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~ 185 (429)
+|+|+.|..+... ..++..|+++|.+.+. ++.+ ......+.+.++++|+.+..+.-.-+-..-..++.+++
T Consensus 90 ~D~V~i~tp~~~h---~~~~~~al~aGk~Vl~EKP~a~~---~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 163 (350)
T 3rc1_A 90 VDAVYVPLPAVLH---AEWIDRALRAGKHVLAEKPLTTD---RPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLD 163 (350)
T ss_dssp CSEEEECCCGGGH---HHHHHHHHHTTCEEEEESSSCSS---HHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHH
T ss_pred CCEEEECCCcHHH---HHHHHHHHHCCCcEEEeCCCCCC---HHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHh
Confidence 9999998765433 6888999999998653 2222 23445666778889988877643333332333344443
Q ss_pred HHHhhcCCCCeEEEEEe
Q 014177 186 VARNESKGEPERLRFSY 202 (429)
Q Consensus 186 ~~~~~~~~~v~~i~~~~ 202 (429)
+-...++..++..+
T Consensus 164 ---~G~iG~i~~v~~~~ 177 (350)
T 3rc1_A 164 ---EGVIGEIRSFAASF 177 (350)
T ss_dssp ---TTTTCSEEEEEEEE
T ss_pred ---cCCCCCeEEEEEEE
Confidence 12456777777654
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.21 E-value=8.4e-07 Score=83.62 Aligned_cols=126 Identities=16% Similarity=0.220 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhH--HHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKG--AAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~--~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
|.|+||.|+|++|.+|+.+++.+.+. ++++++. ++|+.... +.+.+..+ ... ++.-.++++++++++|+||
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~~~~~G~d~gel~g--~~~---gv~v~~dl~~ll~~~DVVI 78 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTGSPQLGQDAGAFLG--KQT---GVALTDDIERVCAEADYLI 78 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTTCTTTTSBTTTTTT--CCC---SCBCBCCHHHHHHHCSEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecCcccccccHHHHhC--CCC---CceecCCHHHHhcCCCEEE
Confidence 66789999999999999999999884 6888876 46664321 00000000 110 2222234566677899999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccch
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
.++.|... ...++.|+++|++.|.-+.. +.. ....+.+.++ ..+++....++.|.
T Consensus 79 DfT~p~a~---~~~~~~al~~G~~vVigTTG--~s~~~~~~L~~aa~--~~~vv~a~N~s~Gv 134 (272)
T 4f3y_A 79 DFTLPEGT---LVHLDAALRHDVKLVIGTTG--FSEPQKAQLRAAGE--KIALVFSANMSVGV 134 (272)
T ss_dssp ECSCHHHH---HHHHHHHHHHTCEEEECCCC--CCHHHHHHHHHHTT--TSEEEECSCCCHHH
T ss_pred EcCCHHHH---HHHHHHHHHcCCCEEEECCC--CCHHHHHHHHHHhc--cCCEEEECCCCHHH
Confidence 99866432 67889999999998853322 222 2224444433 36788888888887
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=4.9e-06 Score=79.06 Aligned_cols=116 Identities=22% Similarity=0.251 Sum_probs=74.9
Q ss_pred cccccccCCcc---CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc------------------hhHHHH
Q 014177 23 TKETVLDGAHF---QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR------------------EKGAAM 81 (429)
Q Consensus 23 ~~~~~~~~~~~---~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~------------------~~~~~l 81 (429)
+|.|+.|.-.. ++.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|.+. .|.+.+
T Consensus 17 ~r~i~L~~~G~~~~q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG-~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa 94 (292)
T 3h8v_A 17 RGSMALKRMGIVSDYEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIG-KLLLFDYDKVELANMNRLFFQPHQAGLSKVQAA 94 (292)
T ss_dssp ---------------CGGGGCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCBC------------CCTTSBHHHHH
T ss_pred hHhhcccccChHHHHHHHhCCeEEEECc-CHHHHHHHHHHHHcCCC-EEEEECCCccChhhcccccCChhhcCchHHHHH
Confidence 45666665543 67788899999996 66999999999998433 899999776 444444
Q ss_pred HHH---hCCC--cEEEEeeCCChHHHHHHh-----------cCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 82 VST---LGKN--SEFAEVNIYNEGSLLMAL-----------RDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 82 ~~~---l~~~--v~~~~~Dl~d~~~l~~~~-----------~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++. +.+. ++.+..++++.+.+.+++ +++|+||+|...+.. -..+-++|.+.++++|+..
T Consensus 95 ~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~--R~~in~~c~~~~~Pli~~g 169 (292)
T 3h8v_A 95 EHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEA--RMTINTACNELGQTWMESG 169 (292)
T ss_dssp HHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHH--HHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhh--hhHHHHHHHHhCCCEEEee
Confidence 433 3333 344555666656666654 689999999875532 2567788999999998754
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.1e-05 Score=75.07 Aligned_cols=150 Identities=10% Similarity=0.015 Sum_probs=98.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|++++|.|+| +|.+|+..++.|.+. ++++++ ++++++++++++++.++. .. -..| +++++. ++|+|+
T Consensus 3 m~~~~igiiG-~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~~~--~~---~~~~---~~~ll~~~~~D~V~ 72 (330)
T 3e9m_A 3 LDKIRYGIMS-TAQIVPRFVAGLRES-AQAEVRGIASRRLENAQKMAKELAI--PV---AYGS---YEELCKDETIDIIY 72 (330)
T ss_dssp CCCEEEEECS-CCTTHHHHHHHHHHS-SSEEEEEEBCSSSHHHHHHHHHTTC--CC---CBSS---HHHHHHCTTCSEEE
T ss_pred CCeEEEEEEC-chHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHHcCC--Cc---eeCC---HHHHhcCCCCCEEE
Confidence 5567999999 599999999999884 578876 678999998888877642 10 1123 455555 799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|..+... ..++..|+++|.|.+.--.-..-......+.+.++++|+.+..+.-.-+-..-..+..+++ +-...
T Consensus 73 i~tp~~~h---~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~---~g~iG 146 (330)
T 3e9m_A 73 IPTYNQGH---YSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQ---EGGLG 146 (330)
T ss_dssp ECCCGGGH---HHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHH---TTTTC
T ss_pred EcCCCHHH---HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHh---CCCCC
Confidence 98866543 6788899999988763111111123445666778889988877754433333333344443 22355
Q ss_pred CCeEEEEEe
Q 014177 194 EPERLRFSY 202 (429)
Q Consensus 194 ~v~~i~~~~ 202 (429)
++..++..+
T Consensus 147 ~i~~i~~~~ 155 (330)
T 3e9m_A 147 EILWVQSVT 155 (330)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 777777654
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.5e-06 Score=76.91 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=85.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+++++|+|+ |.+|+.++..|.+. |.+|++++|+.++++++++.++........|+ +++.+ .++|+||||
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~~--~~~DivIn~ 187 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIPL--QTYDLVINA 187 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCCC--SCCSEEEEC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhcc--CCCCEEEEC
Confidence 356789999997 66999999999997 68999999999999988876642101222343 21111 389999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc-EEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP-AITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~-~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
++........++-..++..+...+|+...+.. ...+...+++.|.. .+.| ..++..+.+..+.
T Consensus 188 t~~~~~~~~~~i~~~~l~~~~~v~D~~y~p~~---~t~ll~~a~~~G~~~~v~G-------~~mLv~Qa~~af~ 251 (272)
T 1p77_A 188 TSAGLSGGTASVDAEILKLGSAFYDMQYAKGT---DTPFIALCKSLGLTNVSDG-------FGMLVAQAAHSFH 251 (272)
T ss_dssp CCC-------CCCHHHHHHCSCEEESCCCTTS---CCHHHHHHHHTTCCCEECS-------HHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeeCCCCc---CCHHHHHHHHcCCCEeeCC-------HHHHHHHHHHHHH
Confidence 86432100001223455678888999875432 01344567788876 5443 3456666665543
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.12 E-value=6e-05 Score=72.93 Aligned_cols=145 Identities=17% Similarity=0.152 Sum_probs=96.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+++|.|+| +|.+|+..++.|.+. ++++++ ++++++++++++++.++ +. ..|. +++++ ++|+|+.|
T Consensus 3 ~~~vgiiG-~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~~--~~-----~~~~---~~~l~~~~~D~V~i~ 70 (331)
T 4hkt_A 3 TVRFGLLG-AGRIGKVHAKAVSGN-ADARLVAVADAFPAAAEAIAGAYG--CE-----VRTI---DAIEAAADIDAVVIC 70 (331)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTT--CE-----ECCH---HHHHHCTTCCEEEEC
T ss_pred ceEEEEEC-CCHHHHHHHHHHhhC-CCcEEEEEECCCHHHHHHHHHHhC--CC-----cCCH---HHHhcCCCCCEEEEe
Confidence 57999999 599999999999884 678877 68999999888887764 32 3444 44554 79999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEP 195 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v 195 (429)
..+... ..++..|+++|.|.+---.-..-......+.+.++++|+.+..+.-.-+...-..+..+++ +....++
T Consensus 71 tp~~~h---~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~---~g~iG~i 144 (331)
T 4hkt_A 71 TPTDTH---ADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAID---DGRIGEV 144 (331)
T ss_dssp SCGGGH---HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH---TTTTCSE
T ss_pred CCchhH---HHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHH---cCCCCce
Confidence 865443 6888999999988663111111123445667788889988877644333333333344443 2335566
Q ss_pred eEEEEE
Q 014177 196 ERLRFS 201 (429)
Q Consensus 196 ~~i~~~ 201 (429)
..+++.
T Consensus 145 ~~~~~~ 150 (331)
T 4hkt_A 145 EMVTIT 150 (331)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 677664
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=4.6e-05 Score=70.59 Aligned_cols=128 Identities=17% Similarity=0.203 Sum_probs=84.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-cCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL-RDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~-~~~DvVi~~agp 118 (429)
+||.|+|++|.+|+.+++.+.+. ++++++.+.... .|.+ +++ .++|+||.++.|
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~elva~~d~~---------------------~dl~---~~~~~~~DvvIDfT~p 55 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDLTLSAELDAG---------------------DPLS---LLTDGNTEVVIDFTHP 55 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTCEEEEEECTT---------------------CCTH---HHHHTTCCEEEECSCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEccC---------------------CCHH---HHhccCCcEEEEccCh
Confidence 48999999999999999998774 578887554221 1223 233 379999999977
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHH-HHHHhhHHHHHHc-CCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCe
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYS-QRAKSFKDRAIAA-NIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE 196 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~-~~~~~~~~~a~~~-g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~ 196 (429)
... ...++.|+++|++.|.-+.. +. ++...+.+.++++ +++++....++.|.. ++ ..+++... ++++.++
T Consensus 56 ~a~---~~~~~~a~~~g~~~VigTTG--~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~-ll-~~l~~~aa-~~~~die 127 (245)
T 1p9l_A 56 DVV---MGNLEFLIDNGIHAVVGTTG--FTAERFQQVESWLVAKPNTSVLIAPNFAIGAV-LS-MHFAKQAA-RFFDSAE 127 (245)
T ss_dssp TTH---HHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHHTSTTCEEEECSCCCHHHH-HH-HHHHHHHG-GGCSEEE
T ss_pred HHH---HHHHHHHHHcCCCEEEcCCC--CCHHHHHHHHHHHHhCCCCCEEEECCccHHHH-HH-HHHHHHHH-hhcCCEE
Confidence 543 68899999999998854322 21 2233455555544 788888877777764 33 33444444 3445666
Q ss_pred EEEE
Q 014177 197 RLRF 200 (429)
Q Consensus 197 ~i~~ 200 (429)
.+..
T Consensus 128 IiE~ 131 (245)
T 1p9l_A 128 VIEL 131 (245)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 6665
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=3.4e-05 Score=72.38 Aligned_cols=135 Identities=18% Similarity=0.148 Sum_probs=91.7
Q ss_pred cccccCCccCCCCC---CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH
Q 014177 25 ETVLDGAHFQMKNR---NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101 (429)
Q Consensus 25 ~~~~~~~~~~~~~~---~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~ 101 (429)
--+||+..+...++ +++++|+|+ |.+|+.++..|.+. |.+|++++|+.+++++++ +++ +... +..+
T Consensus 101 G~NTD~~Gf~~~L~~~~~k~vlvlGa-GGaaraia~~L~~~--G~~v~V~nRt~~ka~~la-~~~--~~~~--~~~~--- 169 (269)
T 3phh_A 101 GYNTDALGFYLSLKQKNYQNALILGA-GGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQ-RLG--CDCF--MEPP--- 169 (269)
T ss_dssp EECCHHHHHHHHCC---CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHH-HHT--CEEE--SSCC---
T ss_pred EecChHHHHHHHHHHcCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH-HCC--CeEe--cHHH---
Confidence 34666666655543 689999996 77999999999997 589999999999999988 664 3322 3333
Q ss_pred HHHHhcCccEEEecCCCC--C--CCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhH
Q 014177 102 LLMALRDVDLVVHAAGPF--Q--QAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 102 l~~~~~~~DvVi~~agp~--~--~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~ 177 (429)
+ .++|+|||+.+.- . ..+ ...+...+..+.-.+|+...+ . .++...+++.|..++.| + .
T Consensus 170 l----~~~DiVInaTp~Gm~~~~~l~-~~~l~~~l~~~~~v~D~vY~P-~----T~ll~~A~~~G~~~~~G------l-~ 232 (269)
T 3phh_A 170 K----SAFDLIINATSASLHNELPLN-KEVLKGYFKEGKLAYDLAYGF-L----TPFLSLAKELKTPFQDG------K-D 232 (269)
T ss_dssp S----SCCSEEEECCTTCCCCSCSSC-HHHHHHHHHHCSEEEESCCSS-C----CHHHHHHHHTTCCEECS------H-H
T ss_pred h----ccCCEEEEcccCCCCCCCCCC-hHHHHhhCCCCCEEEEeCCCC-c----hHHHHHHHHCcCEEECC------H-H
Confidence 1 2899999997421 1 112 334444566777778998764 2 23556778888776444 2 4
Q ss_pred HHHHHHHHHH
Q 014177 178 VMAAELVRVA 187 (429)
Q Consensus 178 ~~a~~~~~~~ 187 (429)
++..+.+..+
T Consensus 233 MLv~Qa~~~f 242 (269)
T 3phh_A 233 MLIYQAALSF 242 (269)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5666666554
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.09 E-value=8.3e-05 Score=72.34 Aligned_cols=147 Identities=18% Similarity=0.171 Sum_probs=97.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+++|.|+| +|.+|+..++.|.+. ++++++ +++|++++++.+++.++ +... . +++++++ ++|+|+.|
T Consensus 4 ~~rvgiiG-~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~g--~~~~----~---~~~~~l~~~~~D~V~i~ 72 (344)
T 3euw_A 4 TLRIALFG-AGRIGHVHAANIAAN-PDLELVVIADPFIEGAQRLAEANG--AEAV----A---SPDEVFARDDIDGIVIG 72 (344)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHTTT--CEEE----S---SHHHHTTCSCCCEEEEC
T ss_pred ceEEEEEC-CcHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHcC--Ccee----C---CHHHHhcCCCCCEEEEe
Confidence 46899999 499999999999884 678877 68999999888887654 2221 2 3556676 79999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEP 195 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v 195 (429)
..+... ..++..|+++|.|.+.-..-..-......+.+.++++|+.+..+.-.-+-..-..+..+++ +-...++
T Consensus 73 tp~~~h---~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~---~g~iG~i 146 (344)
T 3euw_A 73 SPTSTH---VDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVA---NQEIGNL 146 (344)
T ss_dssp SCGGGH---HHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHH---TTTTSSE
T ss_pred CCchhh---HHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHh---cCCCCce
Confidence 865443 6788999999988763211111123444666778888888777644433333333444443 2235567
Q ss_pred eEEEEEe
Q 014177 196 ERLRFSY 202 (429)
Q Consensus 196 ~~i~~~~ 202 (429)
..++..+
T Consensus 147 ~~v~~~~ 153 (344)
T 3euw_A 147 EQLVIIS 153 (344)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7777643
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.8e-05 Score=76.66 Aligned_cols=105 Identities=15% Similarity=0.156 Sum_probs=66.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH--HHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA--AMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~--~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++|+|+||+|++|+.++..|++++...+|++.|++++... .+.... ....+ .. +.+.+++.++++++|+|||+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~-~~~~v-~~-~~~t~d~~~al~gaDvVi~~ 83 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMD-TGAVV-RG-FLGQQQLEAALTGMDLIIVP 83 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSC-SSCEE-EE-EESHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhccc-ccceE-EE-EeCCCCHHHHcCCCCEEEEc
Confidence 346899999999999999999988622268999998876211 122111 11111 22 23345677889999999999
Q ss_pred CCCCCCC-------------chHHHHHHHHHcCCc-EEEeCCCh
Q 014177 116 AGPFQQA-------------PKCTVLEAAIETKTA-YIDVCDDT 145 (429)
Q Consensus 116 agp~~~~-------------~~~~v~~aa~~~gv~-~vdis~~~ 145 (429)
+|..... ...++++++.+.+.+ .+.+++.+
T Consensus 84 ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNP 127 (326)
T 1smk_A 84 AGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNP 127 (326)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCc
Confidence 9854321 235567777777754 33334443
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=98.06 E-value=8.6e-05 Score=72.57 Aligned_cols=147 Identities=15% Similarity=0.101 Sum_probs=96.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh--cCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL--RDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~--~~~DvVi~ 114 (429)
++.+|.|+| +|.+|+..++.|.+ .++++++ ++++++++++++++.++ +.. ..| +++++ .++|+|+.
T Consensus 4 ~~~~vgiiG-~G~~g~~~~~~l~~-~~~~~lvav~d~~~~~~~~~~~~~g--~~~----~~~---~~~~l~~~~~D~V~i 72 (354)
T 3db2_A 4 NPVGVAAIG-LGRWAYVMADAYTK-SEKLKLVTCYSRTEDKREKFGKRYN--CAG----DAT---MEALLAREDVEMVII 72 (354)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHTT-CSSEEEEEEECSSHHHHHHHHHHHT--CCC----CSS---HHHHHHCSSCCEEEE
T ss_pred CcceEEEEc-cCHHHHHHHHHHHh-CCCcEEEEEECCCHHHHHHHHHHcC--CCC----cCC---HHHHhcCCCCCEEEE
Confidence 456899999 58899999999987 4678866 67999999988887664 211 334 44556 47999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
|..+... ..++..|+++|.|.+.--.-..-......+.+.++++|+.+.++.-.-+-..-..+..+++ +-...+
T Consensus 73 ~tp~~~h---~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~---~g~iG~ 146 (354)
T 3db2_A 73 TVPNDKH---AEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMID---TKEIGE 146 (354)
T ss_dssp CSCTTSH---HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHH---TTTTCC
T ss_pred eCChHHH---HHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHh---cCCCCC
Confidence 9866443 6788899999988763211111123445666778888988877644433333333344443 234566
Q ss_pred CeEEEEE
Q 014177 195 PERLRFS 201 (429)
Q Consensus 195 v~~i~~~ 201 (429)
+..++..
T Consensus 147 i~~v~~~ 153 (354)
T 3db2_A 147 VSSIEAV 153 (354)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 7777664
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=98.05 E-value=3.1e-06 Score=78.84 Aligned_cols=103 Identities=15% Similarity=0.201 Sum_probs=75.3
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc-------------------hhHHHHHHHhC---CCcE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR-------------------EKGAAMVSTLG---KNSE 90 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~-------------------~~~~~l~~~l~---~~v~ 90 (429)
++.++.++|+|+|+ |.+|+.+++.|+.. |. +|+++|++. .|.+.+++.+. +.++
T Consensus 26 q~~l~~~~VlVvG~-Gg~G~~va~~La~~--Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~ 102 (249)
T 1jw9_B 26 QEALKDSRVLIVGL-GGLGCAASQYLASA--GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIA 102 (249)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSE
T ss_pred HHHHhCCeEEEEee-CHHHHHHHHHHHHc--CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcE
Confidence 34567789999996 66999999999998 55 899999987 67766655442 3333
Q ss_pred --EEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 91 --FAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 91 --~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
.+..+++ .+.+.++++++|+||++.+.... ...+.++|.+.++++|+.+
T Consensus 103 v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~~~--~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 103 ITPVNALLD-DAELAALIAEHDLVLDCTDNVAV--RNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp EEEECSCCC-HHHHHHHHHTSSEEEECCSSHHH--HHHHHHHHHHHTCCEEEEE
T ss_pred EEEEeccCC-HhHHHHHHhCCCEEEEeCCCHHH--HHHHHHHHHHcCCCEEEee
Confidence 3334454 34567788899999999864321 2567788899999998754
|
| >3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.05 E-value=6.6e-05 Score=73.57 Aligned_cols=151 Identities=11% Similarity=0.072 Sum_probs=94.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|++.+|.|+| +|.+|+..++.|.+..++++++ ++|+++++++++++.++..... ..| ++++++ ++|+|+
T Consensus 21 m~~~rvgiIG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~----~~~---~~~ll~~~~~D~V~ 92 (357)
T 3ec7_A 21 GMTLKAGIVG-IGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKD----YND---YHDLINDKDVEVVI 92 (357)
T ss_dssp -CCEEEEEEC-CSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEE----ESS---HHHHHHCTTCCEEE
T ss_pred CCeeeEEEEC-CcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCee----eCC---HHHHhcCCCCCEEE
Confidence 5567899999 5999999999998435678876 6899999999888876411111 133 445554 699999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE-EecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA-ITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~-i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
.|..+... ..++..|+++|.+.+-=---..-......+.+.++++|+.+ .++.-.-+-..-..+..+++. -..
T Consensus 93 i~tp~~~h---~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~---g~i 166 (357)
T 3ec7_A 93 ITASNEAH---ADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDS---GEI 166 (357)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHH---TTT
T ss_pred EcCCcHHH---HHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhc---CCC
Confidence 98865443 68889999999887631110111224445667778888765 455332222222233444432 245
Q ss_pred CCCeEEEEE
Q 014177 193 GEPERLRFS 201 (429)
Q Consensus 193 ~~v~~i~~~ 201 (429)
.++..++..
T Consensus 167 G~i~~v~~~ 175 (357)
T 3ec7_A 167 GQPLMVHGR 175 (357)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 567777764
|
| >3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.2e-05 Score=74.09 Aligned_cols=120 Identities=9% Similarity=0.054 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|++++|.|+| +|.+|+. .++.|.+ .++++++ +++|++++++++++.++. . . ..|. +++++++|+|+-
T Consensus 4 M~~~~igiIG-~G~~g~~~~~~~l~~-~~~~~l~av~d~~~~~~~~~a~~~~~--~---~-~~~~---~~ll~~~D~V~i 72 (308)
T 3uuw_A 4 MKNIKMGMIG-LGSIAQKAYLPILTK-SERFEFVGAFTPNKVKREKICSDYRI--M---P-FDSI---ESLAKKCDCIFL 72 (308)
T ss_dssp -CCCEEEEEC-CSHHHHHHTHHHHTS-CSSSEEEEEECSCHHHHHHHHHHHTC--C---B-CSCH---HHHHTTCSEEEE
T ss_pred cccCcEEEEe-cCHHHHHHHHHHHHh-CCCeEEEEEECCCHHHHHHHHHHcCC--C---C-cCCH---HHHHhcCCEEEE
Confidence 5678999999 5889996 8888877 4678877 789999999988877652 1 1 3454 445559999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG 170 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g 170 (429)
|..+... ..++..|+++|.|.+-=-.-..-......+.+.++++|+.+..+.-
T Consensus 73 ~tp~~~h---~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 125 (308)
T 3uuw_A 73 HSSTETH---YEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFN 125 (308)
T ss_dssp CCCGGGH---HHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred eCCcHhH---HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 8765543 6788899999998652100111123444566778888988877643
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.9e-05 Score=75.82 Aligned_cols=139 Identities=11% Similarity=0.151 Sum_probs=89.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecC---chhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhcCc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRN---REKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~---~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
++.+++++|+|+ |.+|++++..|.+. |. +|++++|+ .++++++++++.. .......+..+.+.+.+.+.++
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~--G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~ 221 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIE--GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASA 221 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHC
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHc--CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCc
Confidence 356789999996 77999999999997 66 89999999 8888888776541 2344556776654456667789
Q ss_pred cEEEecCCCCCC-CchHHHH-H-HHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 110 DLVVHAAGPFQQ-APKCTVL-E-AAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 110 DvVi~~agp~~~-~~~~~v~-~-aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
|+|||+.+.-.. ....++. . ..+..+.-.+|+...+.. .++-..+++.|..++.| + .++..+.+..
T Consensus 222 DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~----T~ll~~A~~~G~~~~~G------l-~MLv~Qa~~a 290 (312)
T 3t4e_A 222 DILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHM----TKLLQQAQQAGCKTIDG------Y-GMLLWQGAEQ 290 (312)
T ss_dssp SEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSS----CHHHHHHHHTTCEEECH------H-HHHHHHHHHH
T ss_pred eEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCC----CHHHHHHHHCCCeEECc------H-HHHHHHHHHH
Confidence 999999743210 0111110 1 223334445688765422 24556777888765443 2 4566666665
Q ss_pred HH
Q 014177 187 AR 188 (429)
Q Consensus 187 ~~ 188 (429)
+.
T Consensus 291 f~ 292 (312)
T 3t4e_A 291 FE 292 (312)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.5e-06 Score=73.83 Aligned_cols=91 Identities=19% Similarity=0.318 Sum_probs=67.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
.++|+|+|+ |.+|+.+++.|.+. +++|++.+|++++++++.+.++ .... +..+ +.+.++++|+||+|.+.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~~--~~~~--~~~~---~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKYE--YEYV--LIND---IDSLIKNNDVIITATSS 90 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHHT--CEEE--ECSC---HHHHHHTCSEEEECSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHhC--CceE--eecC---HHHHhcCCCEEEEeCCC
Confidence 689999995 99999999999885 7789999999999988887765 2222 3333 55667899999999865
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.... +...+++.|...+|++.
T Consensus 91 ~~~~----~~~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 91 KTPI----VEERSLMPGKLFIDLGN 111 (144)
T ss_dssp SSCS----BCGGGCCTTCEEEECCS
T ss_pred CCcE----eeHHHcCCCCEEEEccC
Confidence 4321 11233456888888864
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.4e-05 Score=78.78 Aligned_cols=77 Identities=21% Similarity=0.259 Sum_probs=64.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+.+++|+|+|+ |.+|+.+++.|... |++|++.+|++++++.+.+.++.. +.+|..+.+++.+.++++|+||+|
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~ 236 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGA 236 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEEC
Confidence 467799999998 89999999999987 789999999999887776555432 556778888898989999999999
Q ss_pred CCC
Q 014177 116 AGP 118 (429)
Q Consensus 116 agp 118 (429)
++.
T Consensus 237 ~g~ 239 (369)
T 2eez_A 237 VLV 239 (369)
T ss_dssp CC-
T ss_pred CCC
Confidence 974
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.4e-05 Score=75.28 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++++|+|+ |.+|+.++..|.+. |. +|++++|+.++++++++.+.. ......+..+ +.. .++|+|||+
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~~-~~~~~~~~~~---l~~--~~~DivIna 188 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQA--GPSELVIANRDMAKALALRNELDH-SRLRISRYEA---LEG--QSFDIVVNA 188 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHT--CCSEEEEECSCHHHHHHHHHHHCC-TTEEEECSGG---GTT--CCCSEEEEC
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhcc-CCeeEeeHHH---hcc--cCCCEEEEC
Confidence 56789999996 67999999999997 64 999999999999999887753 1122233332 222 689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc-EEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP-AITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~-~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
.+.-......++-...+..+...+|+...+.. .++...+++.|.. ++.| + .++..+.+..+.
T Consensus 189 Tp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~----T~ll~~A~~~G~~~~~~G------l-~ML~~Qa~~~f~ 251 (272)
T 3pwz_A 189 TSASLTADLPPLPADVLGEAALAYELAYGKGL----TPFLRLAREQGQARLADG------V-GMLVEQAAEAFA 251 (272)
T ss_dssp SSGGGGTCCCCCCGGGGTTCSEEEESSCSCCS----CHHHHHHHHHSCCEEECT------H-HHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHhCcCCEEEEeecCCCC----CHHHHHHHHCCCCEEECC------H-HHHHHHHHHHHH
Confidence 74211000001112234456666888766432 2345567788876 4433 3 456666666543
|
| >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00013 Score=70.91 Aligned_cols=147 Identities=19% Similarity=0.177 Sum_probs=96.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+++|.|+| +|.+|+..++.|.+ .++++++ ++|+++++++++++.++ +... ..| ++++++ ++|+|+-|
T Consensus 2 ~~rvgiIG-~G~~g~~~~~~l~~-~~~~~l~av~d~~~~~~~~~~~~~~--~~~~---~~~---~~~ll~~~~~D~V~i~ 71 (344)
T 3ezy_A 2 SLRIGVIG-LGRIGTIHAENLKM-IDDAILYAISDVREDRLREMKEKLG--VEKA---YKD---PHELIEDPNVDAVLVC 71 (344)
T ss_dssp CEEEEEEC-CSHHHHHHHHHGGG-STTEEEEEEECSCHHHHHHHHHHHT--CSEE---ESS---HHHHHHCTTCCEEEEC
T ss_pred eeEEEEEc-CCHHHHHHHHHHHh-CCCcEEEEEECCCHHHHHHHHHHhC--CCce---eCC---HHHHhcCCCCCEEEEc
Confidence 46999999 59999999999987 4678876 67999999888887764 2111 133 344555 79999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEP 195 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v 195 (429)
..+... ..++..|+++|.|.+---.-..-......+.+.++++|+.+.++.-.-+-..-..+..+++ +-...++
T Consensus 72 tp~~~h---~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~---~G~iG~i 145 (344)
T 3ezy_A 72 SSTNTH---SELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVE---NGTIGKP 145 (344)
T ss_dssp SCGGGH---HHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHH---TTTTSSE
T ss_pred CCCcch---HHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHH---cCCCCCe
Confidence 865433 6788899999988762111111123344666778888988877754444433333444443 2345567
Q ss_pred eEEEEE
Q 014177 196 ERLRFS 201 (429)
Q Consensus 196 ~~i~~~ 201 (429)
..++..
T Consensus 146 ~~~~~~ 151 (344)
T 3ezy_A 146 HVLRIT 151 (344)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777764
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.01 E-value=2.1e-06 Score=83.32 Aligned_cols=78 Identities=14% Similarity=0.171 Sum_probs=55.9
Q ss_pred CCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCc---------hhHHHHHHHhC------CCcEEEEeeCCCh--
Q 014177 39 NARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNR---------EKGAAMVSTLG------KNSEFAEVNIYNE-- 99 (429)
Q Consensus 39 ~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~---------~~~~~l~~~l~------~~v~~~~~Dl~d~-- 99 (429)
+|.++||||++ .||.++++.|+++ |++|++.+|++ ++++....... ..+..+.+|+++.
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~--G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 79 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTA 79 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccch
Confidence 57899999874 7999999999997 89999666544 33332222211 1256788899877
Q ss_pred H------------------HHHHHhc-------CccEEEecCCC
Q 014177 100 G------------------SLLMALR-------DVDLVVHAAGP 118 (429)
Q Consensus 100 ~------------------~l~~~~~-------~~DvVi~~agp 118 (429)
+ ++.++++ ++|++||+||.
T Consensus 80 ~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi 123 (329)
T 3lt0_A 80 NDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLAN 123 (329)
T ss_dssp GGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCC
T ss_pred hhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcc
Confidence 6 5555543 68999999985
|
| >1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=98.01 E-value=5.3e-05 Score=72.94 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|++++|.|+|+ |.+|+. .++.|.+ .++++++ ++++++++++.+.+.++ +. -..+.+.+ ..++|+|+.
T Consensus 3 m~~~~vgiiG~-G~~g~~~~~~~l~~-~~~~~lvav~d~~~~~~~~~~~~~g--~~----~~~~~~~l---~~~~D~V~i 71 (319)
T 1tlt_A 3 LKKLRIGVVGL-GGIAQKAWLPVLAA-ASDWTLQGAWSPTRAKALPICESWR--IP----YADSLSSL---AASCDAVFV 71 (319)
T ss_dssp --CEEEEEECC-STHHHHTHHHHHHS-CSSEEEEEEECSSCTTHHHHHHHHT--CC----BCSSHHHH---HTTCSEEEE
T ss_pred CCcceEEEECC-CHHHHHHHHHHHHh-CCCeEEEEEECCCHHHHHHHHHHcC--CC----ccCcHHHh---hcCCCEEEE
Confidence 55679999995 889996 8888876 3578876 78999999888887664 22 23444444 458999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG 170 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g 170 (429)
|..+... ..++..|+++|.+.+.-.....-......+.+.++++|+.+..+.-
T Consensus 72 ~tp~~~h---~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~ 124 (319)
T 1tlt_A 72 HSSTASH---FDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFN 124 (319)
T ss_dssp CSCTTHH---HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred eCCchhH---HHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeee
Confidence 8765432 6788899999987653111111123445667778888988776533
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=8.8e-05 Score=72.49 Aligned_cols=149 Identities=14% Similarity=0.053 Sum_probs=95.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
.++++|.|+| +|.+|+..++.|.+..++++++ ++++++++++++++.++ +.. ..|. +++++ ++|+|+
T Consensus 11 ~~~~rvgiiG-~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~--~~~----~~~~---~~ll~~~~~D~V~ 80 (354)
T 3q2i_A 11 DRKIRFALVG-CGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTG--ARG----HASL---TDMLAQTDADIVI 80 (354)
T ss_dssp SSCEEEEEEC-CSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHC--CEE----ESCH---HHHHHHCCCSEEE
T ss_pred CCcceEEEEc-CcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcC--Cce----eCCH---HHHhcCCCCCEEE
Confidence 3567999999 5889999999998853578866 77999999988887764 321 2343 44454 799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|..+... ..++..|+++|.|.+.----..-......+.+.++++|+.+..+.-.-+-..-..+..+++ +-...
T Consensus 81 i~tp~~~h---~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~---~g~iG 154 (354)
T 3q2i_A 81 LTTPSGLH---PTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQ---EKRFG 154 (354)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHH---TTTTC
T ss_pred ECCCcHHH---HHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHh---cCCCC
Confidence 98865433 6788899999988763111011123344666777888888876644333332222333333 23455
Q ss_pred CCeEEEEE
Q 014177 194 EPERLRFS 201 (429)
Q Consensus 194 ~v~~i~~~ 201 (429)
++..++..
T Consensus 155 ~i~~v~~~ 162 (354)
T 3q2i_A 155 RIYMVNVN 162 (354)
T ss_dssp SEEEEEEE
T ss_pred ceEEEEEE
Confidence 66666653
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=3.1e-06 Score=76.50 Aligned_cols=75 Identities=32% Similarity=0.356 Sum_probs=53.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|+|+||+|.+|+.+++.|.+. +++|++.+|++++.+.+.+.++..+. ..|+. .+++.++++++|+||+|+.+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~~~~ 75 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLTIPWE 75 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEECSCHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEeCChh
Confidence 47999998999999999999986 78999999999887776654320000 00111 123455677899999998653
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.98 E-value=2.7e-06 Score=83.20 Aligned_cols=97 Identities=20% Similarity=0.150 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCC-----CceEEEEecCc--hh-HHHHHHHhC--CCcEEEEeeCCChHHHHHHh
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCP-----DLQIVVGSRNR--EK-GAAMVSTLG--KNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~-----g~~v~v~~R~~--~~-~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~ 106 (429)
|+|++|.|+||+|++|+.+++.|.++ + ..+++.+.++. .+ .......+. ..+.+ .|+ +.+ .+
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~~----~~ 78 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EAA----VL 78 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CHH----HH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CHH----Hh
Confidence 45679999999999999999999875 5 56777765322 22 211111111 01122 233 222 24
Q ss_pred cCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 107 RDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 107 ~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+++|+||.|+|.... ..+++.+ +.|+..||+++..
T Consensus 79 ~~~DvVf~alg~~~s---~~~~~~~-~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 79 GGHDAVFLALPHGHS---AVLAQQL-SPETLIIDCGADF 113 (352)
T ss_dssp TTCSEEEECCTTSCC---HHHHHHS-CTTSEEEECSSTT
T ss_pred cCCCEEEECCCCcch---HHHHHHH-hCCCEEEEECCCc
Confidence 589999999876543 6788888 8999999998764
|
| >3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=8.4e-05 Score=72.33 Aligned_cols=150 Identities=18% Similarity=0.104 Sum_probs=94.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+++|.|+| +|.+|+..++.|.+..++++++ +++|++++++++++.++-.... .+| ++++++ ++|+|+.|
T Consensus 2 ~~rigiIG-~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~----~~~---~~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 2 SLRIGVIG-TGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATV----YPN---DDSLLADENVDAVLVT 73 (344)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEE----ESS---HHHHHHCTTCCEEEEC
T ss_pred eEEEEEEC-ccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCee----eCC---HHHHhcCCCCCEEEEC
Confidence 46899999 5999999999998434678876 6799999999888776411111 133 445555 59999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE-EecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA-ITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~-i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+ .++.-.-+-..-..+..+++ +-...+
T Consensus 74 tp~~~h---~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~---~g~iG~ 147 (344)
T 3mz0_A 74 SWGPAH---ESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALD---NHVIGE 147 (344)
T ss_dssp SCGGGH---HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHH---TTTTSS
T ss_pred CCchhH---HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHH---cCCCCC
Confidence 865433 68889999999876631110111234446667778888766 45533223222222344443 223556
Q ss_pred CeEEEEEe
Q 014177 195 PERLRFSY 202 (429)
Q Consensus 195 v~~i~~~~ 202 (429)
+..++..+
T Consensus 148 i~~v~~~~ 155 (344)
T 3mz0_A 148 PLMIHCAH 155 (344)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 77777643
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.8e-05 Score=74.95 Aligned_cols=126 Identities=16% Similarity=0.229 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++++|+|+ |.+|+.++..|.+. |. +|++++|+.++++++++.+ .. .+ .+++.+ + ++|+|||+
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~--G~~~v~v~nRt~~ka~~La~~~----~~--~~---~~~l~~-l-~~DivIna 185 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDN--FAKDIYVVTRNPEKTSEIYGEF----KV--IS---YDELSN-L-KGDVIINC 185 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHT--TCSEEEEEESCHHHHHHHCTTS----EE--EE---HHHHTT-C-CCSEEEEC
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHhc----Cc--cc---HHHHHh-c-cCCEEEEC
Confidence 46789999996 66999999999997 66 8999999999988876533 22 22 234545 4 89999999
Q ss_pred CCC--CCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 116 AGP--FQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp--~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
.+. ....+..++-...++.+.-.+|+...+.- .++-..+++.|..++.| + .++..+.+..+
T Consensus 186 Tp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P~~----T~ll~~A~~~G~~~~~G------l-~MLv~Qa~~~f 248 (282)
T 3fbt_A 186 TPKGMYPKEGESPVDKEVVAKFSSAVDLIYNPVE----TLFLKYARESGVKAVNG------L-YMLVSQAAASE 248 (282)
T ss_dssp SSTTSTTSTTCCSSCHHHHTTCSEEEESCCSSSS----CHHHHHHHHTTCEEECS------H-HHHHHHHHHHH
T ss_pred CccCccCCCccCCCCHHHcCCCCEEEEEeeCCCC----CHHHHHHHHCcCeEeCc------H-HHHHHHHHHHH
Confidence 842 22111112334445666667888765432 24556778888775444 2 45666666554
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.96 E-value=9.4e-05 Score=70.83 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=64.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec--CchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR--NREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R--~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
+||+|+||+|++|+.++..|+..+...++++.|+ +.++++....++. .++++.. + + .+.++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 5899999999999999999988632347999999 7766544332221 2233332 2 2 345889999
Q ss_pred EEecCCCCCCC-------------chHHHHHHHHHcCCcE-EEeCCCh
Q 014177 112 VVHAAGPFQQA-------------PKCTVLEAAIETKTAY-IDVCDDT 145 (429)
Q Consensus 112 Vi~~agp~~~~-------------~~~~v~~aa~~~gv~~-vdis~~~ 145 (429)
|||++|..... ...++++++.+.+.+. +-+.+.+
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP 121 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP 121 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 99999854321 2356777888776544 3334443
|
| >3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
Probab=97.96 E-value=6.6e-05 Score=72.65 Aligned_cols=150 Identities=16% Similarity=0.049 Sum_probs=92.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|++.+|.|+|+ |.+|+..++.|.+. ++.+++ +++|++++++++++.++ +... ..| +++++. ++|+|+
T Consensus 3 m~~~rigiiG~-G~ig~~~~~~l~~~-~~~~~~av~d~~~~~~~~~a~~~~--~~~~---~~~---~~~ll~~~~~D~V~ 72 (329)
T 3evn_A 3 LSKVRYGVVST-AKVAPRFIEGVRLA-GNGEVVAVSSRTLESAQAFANKYH--LPKA---YDK---LEDMLADESIDVIY 72 (329)
T ss_dssp --CEEEEEEBC-CTTHHHHHHHHHHH-CSEEEEEEECSCSSTTCC---CCC--CSCE---ESC---HHHHHTCTTCCEEE
T ss_pred CCceEEEEEec-hHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHHcC--CCcc---cCC---HHHHhcCCCCCEEE
Confidence 55679999995 88999999999875 567665 56899988776665443 1101 123 455666 799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+..+.-.-+-..-..+..+++ +-...
T Consensus 73 i~tp~~~h---~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~---~g~iG 146 (329)
T 3evn_A 73 VATINQDH---YKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLA---SGEIG 146 (329)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHH---TTTTC
T ss_pred ECCCcHHH---HHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHh---CCCCC
Confidence 88765433 6788999999988763111011123444666778889988877654433333223344443 22456
Q ss_pred CCeEEEEEe
Q 014177 194 EPERLRFSY 202 (429)
Q Consensus 194 ~v~~i~~~~ 202 (429)
++..++..+
T Consensus 147 ~i~~v~~~~ 155 (329)
T 3evn_A 147 EVISISSTT 155 (329)
T ss_dssp SEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 777777643
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.94 E-value=4.1e-06 Score=82.24 Aligned_cols=99 Identities=19% Similarity=0.273 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST---LGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
|++++|.|+||+|++|+.+++.|.++ +..+++.+.+..+...++.+. +...+ ..|+...+ ++.++++|+||
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf 87 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANH-PHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVF 87 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTC-SSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEE
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcC-CCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEE
Confidence 44579999999999999999999884 677888776543332222222 21111 12332222 33456899999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.|+|.+.. ...+..+ +.|++.||.+++.
T Consensus 88 ~atp~~~s---~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 88 CCLPHGTT---QEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp ECCCTTTH---HHHHHTS-CTTCEEEECSSTT
T ss_pred EcCCchhH---HHHHHHH-hCCCEEEECCccc
Confidence 99875543 6778888 8999999998753
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=1.8e-05 Score=95.45 Aligned_cols=80 Identities=8% Similarity=0.048 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChH-HHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHhC---CCcEEEEeeCCChHHHHHHhc
Q 014177 37 NRNARVLVLGGTGR-VGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTLG---KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~-iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
+.+|.++||||++. ||+++++.|++. |++|++.+|+.++ ++++.+++. .++..+++|++|.++++++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~--GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDG--GATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHT--TCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHC--CCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence 78899999999999 999999999997 8999999998876 666666654 246778999999998877642
Q ss_pred -----------CccEEEecCCC
Q 014177 108 -----------DVDLVVHAAGP 118 (429)
Q Consensus 108 -----------~~DvVi~~agp 118 (429)
++|++|||||.
T Consensus 2212 ~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2212 WVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp HHTSCCEEEESSSEEEECCCCC
T ss_pred HHHhhhhhhcCCCCEEEECCCc
Confidence 48999999986
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.92 E-value=3.6e-06 Score=80.10 Aligned_cols=135 Identities=15% Similarity=0.214 Sum_probs=84.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC---cEEEEeeCCChHHHHHHhcCccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN---SEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~---v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
++.+++++|+|++ .+|+++++.|++. | +|++++|+.++++++++.+... ...+.+|+.+. .+.+.++|+|
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~Dil 197 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDII 197 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEE
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEE
Confidence 3567899999975 7999999999987 7 9999999999888887655310 00112344442 3456789999
Q ss_pred EecCCCCCCC--chHHH-HHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 113 VHAAGPFQQA--PKCTV-LEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 113 i~~agp~~~~--~~~~v-~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
|||++..... ...++ -...++.+...+|++..+.. ..+...+++.|..++. |+ .++..+.+..+.
T Consensus 198 Vn~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~p~~----t~ll~~a~~~G~~~~~------Gl-~mL~~Qa~~af~ 265 (287)
T 1nvt_A 198 INATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLE----TVLLKEAKKVNAKTIN------GL-GMLIYQGAVAFK 265 (287)
T ss_dssp EECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSS----CHHHHHHHTTTCEEEC------TH-HHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeCCcc----CHHHHHHHHCCCEEeC------cH-HHHHHHHHHHHH
Confidence 9999753310 00012 12234456677899865422 1344567777876433 32 455666655543
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.1e-06 Score=81.16 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=64.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEE-EEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEF-AEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~-~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.|+||+|++|+.+++.|.++ +..+++.+.++.....++.+..+ .+.- ....+.+.+ + +.++|+||.|+|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s~~~~g~~~~~~~~-~~~g~~~~~~~~~~---~-~~~vDvV~~a~g 77 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTSRRFAGEPVHFVHP-NLRGRTNLKFVPPE---K-LEPADILVLALP 77 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBCSTTTTSBGGGTCG-GGTTTCCCBCBCGG---G-CCCCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEECchhhCchhHHhCc-hhcCcccccccchh---H-hcCCCEEEEcCC
Confidence 579999999999999999999874 67788776654332222211110 0000 112223332 3 478999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
.+.. ...+..+++.|++.||++++
T Consensus 78 ~~~s---~~~a~~~~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 78 HGVF---AREFDRYSALAPVLVDLSAD 101 (345)
T ss_dssp TTHH---HHTHHHHHTTCSEEEECSST
T ss_pred cHHH---HHHHHHHHHCCCEEEEcCcc
Confidence 5532 67788889999999999875
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.91 E-value=1.6e-05 Score=77.22 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=66.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc---hhHHHHHHH---hCC--CcEEEEeeCCChHHHHHHhcCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR---EKGAAMVST---LGK--NSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~---~~~~~l~~~---l~~--~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
.|++|.|+|++|++|+.+++.|.+ +|++++..+..+. ...+.+.+. +.+ ...+... .+.+ ++++++
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~-~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~ 76 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNR-HPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGV 76 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTC
T ss_pred CceEEEEECCCChHHHHHHHHHHh-CCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCC
Confidence 357999999999999999999988 4788887765433 332323222 222 1222222 1222 233789
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
|+||-|++.... ...+..+.+.|++.||+|++.
T Consensus 77 Dvvf~a~p~~~s---~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 77 DVVFLATAHEVS---HDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp SEEEECSCHHHH---HHHHHHHHHTTCEEEECSSTT
T ss_pred CEEEECCChHHH---HHHHHHHHHCCCEEEEcCCcc
Confidence 999988764332 577888899999999999763
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.90 E-value=6.9e-06 Score=77.75 Aligned_cols=148 Identities=18% Similarity=0.244 Sum_probs=89.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchh--HHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREK--GAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~--~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.||.|.|++|.+|+.+++.+.+. ++++++.+ +|+... .+.+.+..+ +. ..++.-.+++++++.++|+||.
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~~~~~G~d~gel~G--~~--~~gv~v~~dl~~ll~~aDVvID 94 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKGSSFVDKDASILIG--SD--FLGVRITDDPESAFSNTEGILD 94 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTTCTTTTSBGGGGTT--CS--CCSCBCBSCHHHHTTSCSEEEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccccccchHHhhc--cC--cCCceeeCCHHHHhcCCCEEEE
Confidence 3468999999999999999999874 78887765 665321 111111111 10 1222222346677889999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
+..|... ...++.|+++|++.|.-+.. +.. ....+.+.++ .++++....++.|. +++. .+++...+ ++.
T Consensus 95 FT~p~a~---~~~~~~~l~~Gv~vViGTTG--~~~e~~~~L~~aa~--~~~~~~a~N~SiGv-~ll~-~l~~~aa~-~l~ 164 (288)
T 3ijp_A 95 FSQPQAS---VLYANYAAQKSLIHIIGTTG--FSKTEEAQIADFAK--YTTIVKSGNMSLGV-NLLA-NLVKRAAK-ALD 164 (288)
T ss_dssp CSCHHHH---HHHHHHHHHHTCEEEECCCC--CCHHHHHHHHHHHT--TSEEEECSCCCHHH-HHHH-HHHHHHHH-HSC
T ss_pred cCCHHHH---HHHHHHHHHcCCCEEEECCC--CCHHHHHHHHHHhC--cCCEEEECCCcHHH-HHHH-HHHHHHHH-hcC
Confidence 9866432 67789999999999853322 222 2234444443 37788888888887 3333 23333332 333
Q ss_pred ---CCeEEEE
Q 014177 194 ---EPERLRF 200 (429)
Q Consensus 194 ---~v~~i~~ 200 (429)
.++.+..
T Consensus 165 ~~~dieIiE~ 174 (288)
T 3ijp_A 165 DDFDIEIYEM 174 (288)
T ss_dssp TTSEEEEEEE
T ss_pred CCCCEEEEEc
Confidence 3555565
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.90 E-value=1.4e-05 Score=75.72 Aligned_cols=131 Identities=14% Similarity=0.196 Sum_probs=81.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.+++++|+|+ |.+|+.++..|.+. |. +|++++|+.++++++++.+.........+..+ + ..++|+|||
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---l---~~~aDiIIn 193 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQ--QPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---L---KQSYDVIIN 193 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTT--CCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---C---CSCEEEEEE
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhc--CCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---h---cCCCCEEEE
Confidence 356799999996 67999999999987 75 99999999999999888765211122223322 1 268999999
Q ss_pred cCCCCCCCchHH-HHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc-EEecCCCccchhHHHHHHHHHHH
Q 014177 115 AAGPFQQAPKCT-VLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP-AITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 115 ~agp~~~~~~~~-v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~-~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
+.+.... +..+ +-...+..+...+|+...+.. ..+...+++.|.. ++.| + .++..+.+..+
T Consensus 194 aTp~gm~-~~~~~l~~~~l~~~~~V~DlvY~P~~----T~ll~~A~~~G~~~~~~G------l-~Mlv~Qa~~~f 256 (281)
T 3o8q_A 194 STSASLD-GELPAIDPVIFSSRSVCYDMMYGKGY----TVFNQWARQHGCAQAIDG------L-GMLVGQAAESF 256 (281)
T ss_dssp CSCCCC-----CSCCGGGEEEEEEEEESCCCSSC----CHHHHHHHHTTCSEEECT------H-HHHHHHHHHHH
T ss_pred cCcCCCC-CCCCCCCHHHhCcCCEEEEecCCCcc----CHHHHHHHHCCCCEEECc------H-HHHHHHHHHHH
Confidence 9743211 1001 111123344456788765422 2344567788876 5443 2 45566666554
|
| >1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=2.8e-05 Score=75.14 Aligned_cols=122 Identities=22% Similarity=0.265 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|++.||.|+| +|.+|+.+++.|.+. ++.+++ +++++.++ ++. + .+ .. ..| +++++.++|+||.|
T Consensus 1 M~~irV~IiG-~G~mG~~~~~~l~~~-~~~elvav~d~~~~~--~~~--~--gv---~~-~~d---~~~ll~~~DvViia 65 (320)
T 1f06_A 1 MTNIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSRRATL--DTK--T--PV---FD-VAD---VDKHADDVDVLFLC 65 (320)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEESSSCC--SSS--S--CE---EE-GGG---GGGTTTTCSEEEEC
T ss_pred CCCCEEEEEe-ecHHHHHHHHHHhcC-CCCEEEEEEcCCHHH--hhc--C--CC---ce-eCC---HHHHhcCCCEEEEc
Confidence 3457899999 599999999999874 577765 66777554 111 1 11 11 123 33445789999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
..+... ...+..|+++|.+.++-.......... ..+.+.+++.+...+...++.||..
T Consensus 66 tp~~~h---~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~~~ 124 (320)
T 1f06_A 66 MGSATD---IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPGMF 124 (320)
T ss_dssp SCTTTH---HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTBHH
T ss_pred CCcHHH---HHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHHHH
Confidence 877543 577888999999988654332223333 4666667766756666678889873
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00017 Score=70.18 Aligned_cols=147 Identities=11% Similarity=0.060 Sum_probs=95.0
Q ss_pred CCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 38 RNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
.|.||.|+| +|.+|+. .+..|.+ .++.+|+ ++|++++++++++++++ +... .+| ++++++ ++|+|+
T Consensus 22 ~mirigiIG-~G~ig~~~~~~~~~~-~~~~~lvav~d~~~~~a~~~a~~~g--~~~~---y~d---~~ell~~~~iDaV~ 91 (350)
T 4had_A 22 SMLRFGIIS-TAKIGRDNVVPAIQD-AENCVVTAIASRDLTRAREMADRFS--VPHA---FGS---YEEMLASDVIDAVY 91 (350)
T ss_dssp CCEEEEEES-CCHHHHHTHHHHHHH-CSSEEEEEEECSSHHHHHHHHHHHT--CSEE---ESS---HHHHHHCSSCSEEE
T ss_pred CccEEEEEc-ChHHHHHHHHHHHHh-CCCeEEEEEECCCHHHHHHHHHHcC--CCee---eCC---HHHHhcCCCCCEEE
Confidence 457999999 6889975 6677766 4688876 67899999999998875 2212 234 344453 699999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNE 190 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~ 190 (429)
-|..+... ..++.+|+++|.|.+- ++.+. .....+.+.++++|+.+.++.-.-+-..-..++.+++ +-
T Consensus 92 I~tP~~~H---~~~~~~al~aGkhVl~EKPla~~~---~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~---~G 162 (350)
T 4had_A 92 IPLPTSQH---IEWSIKAADAGKHVVCEKPLALKA---GDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLID---EG 162 (350)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEECSCCCSSG---GGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHH---TT
T ss_pred EeCCCchh---HHHHHHHHhcCCEEEEeCCcccch---hhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhh---cC
Confidence 99865443 6889999999988752 12222 1233555677888888877644333333333444443 23
Q ss_pred cCCCCeEEEEEee
Q 014177 191 SKGEPERLRFSYY 203 (429)
Q Consensus 191 ~~~~v~~i~~~~~ 203 (429)
...++..++..+.
T Consensus 163 ~iG~i~~i~~~~~ 175 (350)
T 4had_A 163 AIGSLRHVQGAFT 175 (350)
T ss_dssp TTSSEEEEEEEEE
T ss_pred CCCcceeeeEEEe
Confidence 4456777776443
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=4.1e-05 Score=69.81 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=56.1
Q ss_pred CCCCCeEEEEcC----------------ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGG----------------TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga----------------~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
+|.+++|||||| +|.+|.++++.|+++ |++|++++++.. ++ .+..+ ..+|+++.
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~--Ga~V~l~~~~~~-l~-----~~~g~--~~~dv~~~ 74 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVS-LP-----TPPFV--KRVDVMTA 74 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCC-CC-----CCTTE--EEEECCSH
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHC--CCEEEEEECCcc-cc-----cCCCC--eEEccCcH
Confidence 378899999999 699999999999998 899999887642 11 11222 45788887
Q ss_pred HHHHHH----hcCccEEEecCCCC
Q 014177 100 GSLLMA----LRDVDLVVHAAGPF 119 (429)
Q Consensus 100 ~~l~~~----~~~~DvVi~~agp~ 119 (429)
+++.+. +.++|++||+||..
T Consensus 75 ~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 75 LEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCC
T ss_pred HHHHHHHHHhcCCCCEEEECCccc
Confidence 655443 34799999999864
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.89 E-value=3.4e-05 Score=70.77 Aligned_cols=99 Identities=10% Similarity=0.063 Sum_probs=74.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
.++|+|+|+ |.+|+.+++.|.+. ++ |+++++++++.+.+. ..+.++.+|.+|.+.+.++ ++++|.||.+.+
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGS--EV-FVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHH----TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHh----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 468999995 99999999999886 78 999999998877665 2478999999999988877 789999998875
Q ss_pred CCCCCchHHHHHHHHHcCCc-E-EEeCCChhH
Q 014177 118 PFQQAPKCTVLEAAIETKTA-Y-IDVCDDTIY 147 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~-~-vdis~~~~~ 147 (429)
.-. .+..+...|.+.+.+ + +....+..+
T Consensus 81 ~d~--~n~~~~~~a~~~~~~~~iia~~~~~~~ 110 (234)
T 2aef_A 81 SDS--ETIHCILGIRKIDESVRIIAEAERYEN 110 (234)
T ss_dssp CHH--HHHHHHHHHHHHCSSSEEEEECSSGGG
T ss_pred CcH--HHHHHHHHHHHHCCCCeEEEEECCHhH
Confidence 321 124556677777765 4 333344433
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.7e-05 Score=74.01 Aligned_cols=125 Identities=14% Similarity=0.144 Sum_probs=80.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+ +++|+|+ |.+|++++..|.+. |. +|++++|+.++++++++.+ .. .+ .+++.+.++++|+|||+
T Consensus 107 ~~~-~vliiGa-Gg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~~----~~--~~---~~~~~~~~~~aDiVIna 173 (253)
T 3u62_A 107 VKE-PVVVVGA-GGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFPV----KI--FS---LDQLDEVVKKAKSLFNT 173 (253)
T ss_dssp CCS-SEEEECC-SHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSSC----EE--EE---GGGHHHHHHTCSEEEEC
T ss_pred CCC-eEEEECc-HHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHc----cc--CC---HHHHHhhhcCCCEEEEC
Confidence 356 8999996 77999999999997 66 8999999999877665432 22 12 24466778899999998
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCc-EEecCCCccchhHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIP-AITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~-~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
..........++-...++.+.-.+|+... . .++.+.+++.|.. +++ |. .++..+.+..+
T Consensus 174 tp~gm~p~~~~i~~~~l~~~~~V~Divy~-~-----T~ll~~A~~~G~~~~~~------Gl-~MLv~Qa~~af 233 (253)
T 3u62_A 174 TSVGMKGEELPVSDDSLKNLSLVYDVIYF-D-----TPLVVKARKLGVKHIIK------GN-LMFYYQAMENL 233 (253)
T ss_dssp SSTTTTSCCCSCCHHHHTTCSEEEECSSS-C-----CHHHHHHHHHTCSEEEC------TH-HHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHhCcCCEEEEeeCC-C-----cHHHHHHHHCCCcEEEC------CH-HHHHHHHHHHH
Confidence 74211000012223345566667898865 1 2444566777876 544 43 45566666554
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.88 E-value=3.7e-05 Score=75.33 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHh-HcCCCceEEEEecCchh---------------HHHHHHHhCCCcEEEEeeCCChH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALS-KLCPDLQIVVGSRNREK---------------GAAMVSTLGKNSEFAEVNIYNEG 100 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~-~~~~g~~v~v~~R~~~~---------------~~~l~~~l~~~v~~~~~Dl~d~~ 100 (429)
..+|++||+||+..+|.+.+..|+ .. +..++++.++.+. ..+..+..+.+...+.+|++|.+
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~--GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGY--GAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHH--CCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhC--CCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 567999999999999999999988 44 7788888765432 12333445567889999999998
Q ss_pred HHHHHhc-------CccEEEecCCC
Q 014177 101 SLLMALR-------DVDLVVHAAGP 118 (429)
Q Consensus 101 ~l~~~~~-------~~DvVi~~agp 118 (429)
+++++++ ++|++||+++.
T Consensus 126 ~i~~vi~~i~~~~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 126 IKAQVIEEAKKKGIKFDLIVYSLAS 150 (401)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEeccc
Confidence 8887765 79999999974
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.86 E-value=1.3e-05 Score=75.76 Aligned_cols=127 Identities=16% Similarity=0.223 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|+|+|+ |.+|+.+++.|.+. +++|++++|+.++++++.+.++ +. +.+ ++.+.++++|+||+|.
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~g--~~-----~~~--~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKFP--LE-----VVN--SPEEVIDKVQVIVNTT 194 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTSC--EE-----ECS--CGGGTGGGCSEEEECS
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHcC--Ce-----eeh--hHHhhhcCCCEEEEeC
Confidence 55689999995 78999999999997 6799999999998887765442 21 121 2345667899999998
Q ss_pred CCCCCCchHHHHH-HHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 117 GPFQQAPKCTVLE-AAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 117 gp~~~~~~~~v~~-aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
++.........+. ..++.+...+|++. .. ..+.+.+++.|...+. | ..++..+.+..+.
T Consensus 195 p~~~~~~~~~~i~~~~l~~g~~viDv~~-~~-----t~ll~~a~~~g~~~v~------g-~~mlv~q~~~a~~ 254 (275)
T 2hk9_A 195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY-KE-----TKLLKKAKEKGAKLLD------G-LPMLLWQGIEAFK 254 (275)
T ss_dssp STTSSTTCCCSSCGGGCCTTSEEEESSS-SC-----CHHHHHHHHTTCEEEC------S-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCC-Ch-----HHHHHHHHHCcCEEEC------C-HHHHHHHHHHHHH
Confidence 6543100001121 23456777788886 21 2344556677776544 3 3445555555443
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00032 Score=68.08 Aligned_cols=150 Identities=14% Similarity=0.023 Sum_probs=91.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
+++++|.|+|+ |.+|+..++.|.+..+++++ .++++++++++.+++.++ +... ..| ++++++ ++|+|+
T Consensus 6 ~~~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g--~~~~---~~~---~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 6 RKPLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELG--VETT---YTN---YKDMIDTENIDAIF 76 (346)
T ss_dssp CCCEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTC--CSEE---ESC---HHHHHTTSCCSEEE
T ss_pred CCcceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhC--CCcc---cCC---HHHHhcCCCCCEEE
Confidence 34579999995 88999999998822457775 467999999888877654 2111 123 445555 799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHc-CCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAA-NIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~-g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
.|..+... ..++..|+++|.+.+--..-..-......+.+.++++ |+.+..+...-+-..-..+..+++ +...
T Consensus 77 i~tp~~~h---~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~---~g~i 150 (346)
T 3cea_A 77 IVAPTPFH---PEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVD---NGDI 150 (346)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHH---TTTT
T ss_pred EeCChHhH---HHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHH---cCCC
Confidence 99865433 6788889999987653110011122344566777788 888766533222222222233332 2345
Q ss_pred CCCeEEEEE
Q 014177 193 GEPERLRFS 201 (429)
Q Consensus 193 ~~v~~i~~~ 201 (429)
.++..++..
T Consensus 151 G~i~~v~~~ 159 (346)
T 3cea_A 151 GKIIYMRGY 159 (346)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 567777664
|
| >3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00015 Score=71.63 Aligned_cols=150 Identities=17% Similarity=0.081 Sum_probs=94.5
Q ss_pred CCCCeEEEEcCChHHHHH-HH----HHHhHcCCCceE----------EEEecCchhHHHHHHHhCCCcEEEEeeCCChHH
Q 014177 37 NRNARVLVLGGTGRVGGS-TA----VALSKLCPDLQI----------VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~----~~L~~~~~g~~v----------~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~ 101 (429)
+++.+|.|+|++|++|+. .+ +.+.+. ++..+ .+++|++++++++++.++. ... .+|
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~-~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~--~~~---~~~--- 74 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ-GGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNI--ARW---TTD--- 74 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH-TSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTC--CCE---ESC---
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc-CceeecCCcccceeeEEEcCCHHHHHHHHHHhCC--Ccc---cCC---
Confidence 455789999988999997 66 777664 34443 3889999999999887752 111 134
Q ss_pred HHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC-hhHHHHHHhhHHHHHHcCCcEEecCCCccchhHH
Q 014177 102 LLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD-TIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 102 l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~-~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
++++++ ++|+|+.|..+... ..++.+|+++|.|.+ +--- ..-......+.+.++++|+.+.++.-.-+-..-.
T Consensus 75 ~~~ll~~~~iD~V~i~tp~~~h---~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~ 150 (383)
T 3oqb_A 75 LDAALADKNDTMFFDAATTQAR---PGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPGLK 150 (383)
T ss_dssp HHHHHHCSSCCEEEECSCSSSS---HHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHHHH
T ss_pred HHHHhcCCCCCEEEECCCchHH---HHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHHHH
Confidence 344554 59999988765443 688999999999876 2110 1112344466677888898876664322222222
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEEe
Q 014177 179 MAAELVRVARNESKGEPERLRFSY 202 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~~~ 202 (429)
.+..+++ +-...++..++..+
T Consensus 151 ~~~~~i~---~g~iG~i~~~~~~~ 171 (383)
T 3oqb_A 151 KIAFLRD---SGFFGRILSVRGEF 171 (383)
T ss_dssp HHHHHHH---TTTTSSEEEEEEEE
T ss_pred HHHHHHH---cCCCCCcEEEEEEe
Confidence 2333332 23455677777643
|
| >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00033 Score=67.46 Aligned_cols=149 Identities=13% Similarity=0.084 Sum_probs=93.1
Q ss_pred CCeEEEEcCChHHHH-HHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGG-STAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.|+| +|.+|+ ..++.|.+. ++.+++++++++++++++++.++. .....| +.+.+ -.++|+|+.|..
T Consensus 2 ~~~igiIG-~G~ig~~~~~~~l~~~-~~~~l~v~d~~~~~~~~~a~~~g~--~~~~~~--~~~~l---~~~~D~V~i~tp 72 (323)
T 1xea_A 2 SLKIAMIG-LGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRYRV--SATCTD--YRDVL---QYGVDAVMIHAA 72 (323)
T ss_dssp CEEEEEEC-CCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHTTC--CCCCSS--TTGGG---GGCCSEEEECSC
T ss_pred CcEEEEEC-CCHHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHcCC--CccccC--HHHHh---hcCCCEEEEECC
Confidence 46899999 589998 588888773 578888999999999888877642 111112 12222 258999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCeE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPER 197 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~ 197 (429)
+... ..++..|+++|.+.+.-..-..-......+.+.++++|+.+..+.-.-+-..-..+..+++. -...++..
T Consensus 73 ~~~h---~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~---g~iG~i~~ 146 (323)
T 1xea_A 73 TDVH---STLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQ---QECGALRS 146 (323)
T ss_dssp GGGH---HHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHHH---TSCTTCSE
T ss_pred chhH---HHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHhc---CCcCCceE
Confidence 6543 67888899999987521100111123446667788889888776433222222223334332 23456667
Q ss_pred EEEEe
Q 014177 198 LRFSY 202 (429)
Q Consensus 198 i~~~~ 202 (429)
++..+
T Consensus 147 v~~~~ 151 (323)
T 1xea_A 147 LRWEK 151 (323)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.6e-05 Score=93.81 Aligned_cols=80 Identities=21% Similarity=0.145 Sum_probs=62.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhH---HHHHHHh---CCCcEEEEeeCCChHHHHHHhc---
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKG---AAMVSTL---GKNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~---~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.+++++||||+|.||+++++.|+++ |++ |++.+|+..+. ++..+++ +.++..+.+|++|.++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLR--GAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHC--CCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence 4689999999999999999999997 776 88889986543 2233322 3457788999999998887764
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
.+|+|||+||..
T Consensus 1961 ~~g~id~lVnnAgv~ 1975 (2512)
T 2vz8_A 1961 QLGPVGGVFNLAMVL 1975 (2512)
T ss_dssp HHSCEEEEEECCCC-
T ss_pred hcCCCcEEEECCCcC
Confidence 689999999864
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00047 Score=66.48 Aligned_cols=145 Identities=17% Similarity=0.081 Sum_probs=91.4
Q ss_pred CeEEEEcCChHHHHHH-HHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 40 ARVLVLGGTGRVGGST-AVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l-~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
++|.|+| +|.+|+.. ++.|.+ ++.+++ ++++++++++++.+.++.. . -..| ++++++ ++|+|+.+
T Consensus 1 ~~vgiiG-~G~~g~~~~~~~l~~--~~~~~vav~d~~~~~~~~~~~~~g~~-~----~~~~---~~~~l~~~~~D~V~i~ 69 (332)
T 2glx_A 1 NRWGLIG-ASTIAREWVIGAIRA--TGGEVVSMMSTSAERGAAYATENGIG-K----SVTS---VEELVGDPDVDAVYVS 69 (332)
T ss_dssp CEEEEES-CCHHHHHTHHHHHHH--TTCEEEEEECSCHHHHHHHHHHTTCS-C----CBSC---HHHHHTCTTCCEEEEC
T ss_pred CeEEEEc-ccHHHHHhhhHHhhc--CCCeEEEEECCCHHHHHHHHHHcCCC-c----ccCC---HHHHhcCCCCCEEEEe
Confidence 4799999 48899997 788877 478765 6799999988887766421 0 0123 445565 59999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC--CccchhHHHHHHHHHHHHhhcCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG--IYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g--~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
..+... ..++..|+++|.|.+--..-..-......+.+.++++|+.+..+.- +.|+.-+ +..+++ +....
T Consensus 70 tp~~~h---~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~--~~~~i~---~g~iG 141 (332)
T 2glx_A 70 TTNELH---REQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRA--MRDAIA---EGRIG 141 (332)
T ss_dssp SCGGGH---HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHH--HHHHHH---TTTTS
T ss_pred CChhHh---HHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHH--HHHHHH---cCCCC
Confidence 866443 6788899999987653111111123444666777888888776533 2333222 233332 23455
Q ss_pred CCeEEEEEee
Q 014177 194 EPERLRFSYY 203 (429)
Q Consensus 194 ~v~~i~~~~~ 203 (429)
++..++..+.
T Consensus 142 ~i~~v~~~~~ 151 (332)
T 2glx_A 142 RPIAARVFHA 151 (332)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEEc
Confidence 6777776543
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.5e-05 Score=76.44 Aligned_cols=98 Identities=21% Similarity=0.228 Sum_probs=65.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHhCCC---------cEEEEeeCCChHHHHHHhc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTLGKN---------SEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l~~~---------v~~~~~Dl~d~~~l~~~~~ 107 (429)
++++|.|+||+|++|+.+++.|.++ +..+++.+. .+....+.+.+.++.. .+....|. |.+. ++
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~ 76 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKH-PYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HK 76 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GT
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhC-CCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hc
Confidence 3578999999999999999999874 788887774 2222222222222100 11111333 3322 36
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
++|+||-|++.+.. ..++..+++.|++.||.+++
T Consensus 77 ~vDvVf~atp~~~s---~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 77 DVDVVLSALPNELA---ESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp TCSEEEECCCHHHH---HHHHHHHHHTTCEEEECSST
T ss_pred CCCEEEECCChHHH---HHHHHHHHHCCCEEEECCcc
Confidence 89999988865432 67888999999999999875
|
| >3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=97.80 E-value=8e-05 Score=73.03 Aligned_cols=150 Identities=14% Similarity=0.077 Sum_probs=92.6
Q ss_pred CCCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
|++++|.|+| +|.+|+. .++.|.+ .++.+++ ++||++++++.+++.++ ..... .| ++++++ ++|+|
T Consensus 3 M~~~rigiIG-~G~~g~~~~~~~l~~-~~~~~l~av~d~~~~~~~~~a~~~~-~~~~~----~~---~~~ll~~~~vD~V 72 (359)
T 3m2t_A 3 LSLIKVGLVG-IGAQMQENLLPSLLQ-MQDIRIVAACDSDLERARRVHRFIS-DIPVL----DN---VPAMLNQVPLDAV 72 (359)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHT-CTTEEEEEEECSSHHHHGGGGGTSC-SCCEE----SS---HHHHHHHSCCSEE
T ss_pred CCcceEEEEC-CCHHHHHHHHHHHHh-CCCcEEEEEEcCCHHHHHHHHHhcC-CCccc----CC---HHHHhcCCCCCEE
Confidence 5567999999 6889985 8888877 4678876 77999998887776543 12111 33 444454 68999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
+.|..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+.++.-.-+...-..+..+++ +-..
T Consensus 73 ~i~tp~~~H---~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~---~g~i 146 (359)
T 3m2t_A 73 VMAGPPQLH---FEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQ---VDEF 146 (359)
T ss_dssp EECSCHHHH---HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHHHHHHHHHHT---SGGG
T ss_pred EEcCCcHHH---HHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHHHHHHHHHHH---CCCC
Confidence 988765432 6788899999988653110011122344566777888888766533222222222333332 2234
Q ss_pred CCCeEEEEEe
Q 014177 193 GEPERLRFSY 202 (429)
Q Consensus 193 ~~v~~i~~~~ 202 (429)
.++..++..+
T Consensus 147 G~i~~~~~~~ 156 (359)
T 3m2t_A 147 GETLHIQLNH 156 (359)
T ss_dssp CCEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 5677777644
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00043 Score=67.78 Aligned_cols=145 Identities=17% Similarity=0.106 Sum_probs=91.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|++.+|.|+| +|.+|+..++.|.+. ++++++ ++++++++++. ++..+ +. -..| ++++++ ++|+|+
T Consensus 3 m~~~~vgiiG-~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~-a~~~g--~~----~~~~---~~~ll~~~~~D~V~ 70 (359)
T 3e18_A 3 LKKYQLVIVG-YGGMGSYHVTLASAA-DNLEVHGVFDILAEKREA-AAQKG--LK----IYES---YEAVLADEKVDAVL 70 (359)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHHTS-TTEEEEEEECSSHHHHHH-HHTTT--CC----BCSC---HHHHHHCTTCCEEE
T ss_pred CCcCcEEEEC-cCHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHH-HHhcC--Cc----eeCC---HHHHhcCCCCCEEE
Confidence 5567899999 599999999988774 678876 56888887653 33322 21 1234 445555 799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNE 190 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~ 190 (429)
-|..+... ..++..|+++|.|.+. ++.+. .....+.+.++++|+.+.++.-.-+-..-..+..+++. -
T Consensus 71 i~tp~~~h---~~~~~~al~aGkhVl~EKP~a~~~---~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~---g 141 (359)
T 3e18_A 71 IATPNDSH---KELAISALEAGKHVVCEKPVTMTS---EDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQ---K 141 (359)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEEESSCCSSH---HHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHH---T
T ss_pred EcCCcHHH---HHHHHHHHHCCCCEEeeCCCcCCH---HHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHc---C
Confidence 88765433 6888999999988763 22222 34445667788888887766433233222233444432 3
Q ss_pred cCCCCeEEEEEe
Q 014177 191 SKGEPERLRFSY 202 (429)
Q Consensus 191 ~~~~v~~i~~~~ 202 (429)
...++..++..+
T Consensus 142 ~iG~i~~~~~~~ 153 (359)
T 3e18_A 142 TIGEMFHLESRV 153 (359)
T ss_dssp TTSSEEEEEEEE
T ss_pred CCCCeEEEEEEE
Confidence 455666666543
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00014 Score=72.69 Aligned_cols=90 Identities=18% Similarity=0.145 Sum_probs=73.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp 118 (429)
++|+|+| +|.+|+.+++.|.+. +++|+++++++++.+.+.+ ..+.++.+|.++.+.|.++ ++++|+||.+.+.
T Consensus 5 ~~viIiG-~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~---~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 5 MRVIIAG-FGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRK---FGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHH---TTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHh---CCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 5799999 599999999999997 8999999999999887764 2467899999999998887 7799999988763
Q ss_pred CCCCchHHHHHHHHHcCCc
Q 014177 119 FQQAPKCTVLEAAIETKTA 137 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~ 137 (429)
.. .+..++..+.+.+.+
T Consensus 79 ~~--~n~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 79 PQ--TNLQLTEMVKEHFPH 95 (413)
T ss_dssp HH--HHHHHHHHHHHHCTT
T ss_pred hH--HHHHHHHHHHHhCCC
Confidence 21 235667777777754
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.77 E-value=5.7e-05 Score=67.24 Aligned_cols=75 Identities=21% Similarity=0.217 Sum_probs=55.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHH---HHHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSL---LMALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l---~~~~~--~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+|+.++.+.+. .++ .. ...|..+.+.. .+... ++|+|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~-~~g--~~-~~~d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS-RLG--VE-YVGDSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH-TTC--CS-EEEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH-HcC--CC-EEeeCCcHHHHHHHHHHhCCCCCeEE
Confidence 3579999999999999999999887 789999999988776553 333 22 23577765433 33332 59999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|||+|+
T Consensus 112 i~~~g~ 117 (198)
T 1pqw_A 112 LNSLAG 117 (198)
T ss_dssp EECCCT
T ss_pred EECCch
Confidence 999973
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00012 Score=67.38 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=77.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-cCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL-RDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~-~~~DvVi~~ag 117 (429)
++|.|+|. |.+|+.+++.|.+. ++++ .+++|+. +.+ . -..| +++++ .++|+||.|++
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~--g~~lv~v~d~~~-~~~--------~------~~~~---~~~l~~~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERN--GFEIAAILDVRG-EHE--------K------MVRG---IDEFLQREMDVAVEAAS 59 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEECSSC-CCT--------T------EESS---HHHHTTSCCSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHhcC--CCEEEEEEecCc-chh--------h------hcCC---HHHHhcCCCCEEEECCC
Confidence 47999995 99999999999854 7887 5778774 221 1 1233 44556 68999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccch
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGV 175 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~ 175 (429)
+... ..++..+++.|.+.++.+....-.... ..+.+.++++|..+++.++...|.
T Consensus 60 ~~~~---~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~ 115 (236)
T 2dc1_A 60 QQAV---KDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGL 115 (236)
T ss_dssp HHHH---HHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCH
T ss_pred HHHH---HHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccCh
Confidence 6532 577788999999998876432111222 456666777888877777766664
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.75 E-value=6.5e-05 Score=69.95 Aligned_cols=104 Identities=18% Similarity=0.269 Sum_probs=72.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHHh---CCCcEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVSTL---GKNSEF 91 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~l---~~~v~~ 91 (429)
++.++.++|+|+|+ |.+|+.+++.|+..+- -+++++|++. .|.+.+++.+ .+.+++
T Consensus 23 q~~l~~~~VlvvG~-GglG~~va~~La~~Gv-g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v 100 (251)
T 1zud_1 23 QQKLLDSQVLIIGL-GGLGTPAALYLAGAGV-GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQL 100 (251)
T ss_dssp HHHHHTCEEEEECC-STTHHHHHHHHHHTTC-SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred HHHHhcCcEEEEcc-CHHHHHHHHHHHHcCC-CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEE
Confidence 44577899999997 5599999999999732 2888987653 4555554443 234444
Q ss_pred EEe--eCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 92 AEV--NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 92 ~~~--Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
... ++ +.+.+.++++++|+||+|...+.. ...+.++|.+.++++|+.+
T Consensus 101 ~~~~~~~-~~~~~~~~~~~~DvVi~~~d~~~~--r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 101 TALQQRL-TGEALKDAVARADVVLDCTDNMAT--RQEINAACVALNTPLITAS 150 (251)
T ss_dssp EEECSCC-CHHHHHHHHHHCSEEEECCSSHHH--HHHHHHHHHHTTCCEEEEE
T ss_pred EEEeccC-CHHHHHHHHhcCCEEEECCCCHHH--HHHHHHHHHHhCCCEEEEe
Confidence 333 33 335677888899999999764322 2467778889999988754
|
| >2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00057 Score=68.91 Aligned_cols=151 Identities=13% Similarity=0.078 Sum_probs=95.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHh---C-CCcEEEEeeCCChHHHHHHhc--Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTL---G-KNSEFAEVNIYNEGSLLMALR--DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l---~-~~v~~~~~Dl~d~~~l~~~~~--~~ 109 (429)
|++.+|.|+| +|.+|+..++.|.+ .++++|+ ++|+++++++++++.+ + +....... +.++++++++ ++
T Consensus 18 ~~~~rvgiIG-~G~~g~~h~~~l~~-~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~---~~~~~~~ll~~~~v 92 (444)
T 2ixa_A 18 PKKVRIAFIA-VGLRGQTHVENMAR-RDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGN---GNDDYKNMLKDKNI 92 (444)
T ss_dssp -CCEEEEEEC-CSHHHHHHHHHHHT-CTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECS---STTTHHHHTTCTTC
T ss_pred CCCceEEEEe-cCHHHHHHHHHHHh-CCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceecc---CCCCHHHHhcCCCC
Confidence 5567999999 69999999988877 4678765 6789999888876643 2 11222211 1224666776 69
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
|+|+.|..+... ..++.+|+++|.|.+- ++.+ ......+.+.++++|+.+.++...-+...-..+..+++
T Consensus 93 D~V~i~tp~~~h---~~~~~~al~aGkhV~~EKP~a~~---~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~- 165 (444)
T 2ixa_A 93 DAVFVSSPWEWH---HEHGVAAMKAGKIVGMEVSGAIT---LEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVR- 165 (444)
T ss_dssp CEEEECCCGGGH---HHHHHHHHHTTCEEEECCCCCSS---HHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHH-
T ss_pred CEEEEcCCcHHH---HHHHHHHHHCCCeEEEeCCCcCC---HHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHH-
Confidence 999999865433 6788899999987753 1222 22344666777888888776533323222222334433
Q ss_pred HHhhcCCCCeEEEEE
Q 014177 187 ARNESKGEPERLRFS 201 (429)
Q Consensus 187 ~~~~~~~~v~~i~~~ 201 (429)
+-...++..++..
T Consensus 166 --~G~iG~i~~v~~~ 178 (444)
T 2ixa_A 166 --KGMFGELVHGTGG 178 (444)
T ss_dssp --TTTTCSEEEEEEC
T ss_pred --cCCCCCeEEEEEE
Confidence 2345577777763
|
| >3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00073 Score=65.30 Aligned_cols=145 Identities=10% Similarity=0.070 Sum_probs=94.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCC--ceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPD--LQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g--~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
+.||.|+| +|.+|+..++.|.+. ++ +++ .+++|++++++++++.++. ... ..| ++++++ ++|+|+
T Consensus 2 ~~rigiiG-~G~ig~~~~~~l~~~-~~~~~~l~av~d~~~~~a~~~a~~~~~--~~~---~~~---~~~ll~~~~vD~V~ 71 (334)
T 3ohs_X 2 ALRWGIVS-VGLISSDFTAVLQTL-PRSEHQVVAVAARDLSRAKEFAQKHDI--PKA---YGS---YEELAKDPNVEVAY 71 (334)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTS-CTTTEEEEEEECSSHHHHHHHHHHHTC--SCE---ESS---HHHHHHCTTCCEEE
T ss_pred ccEEEEEC-chHHHHHHHHHHHhC-CCCCeEEEEEEcCCHHHHHHHHHHcCC--Ccc---cCC---HHHHhcCCCCCEEE
Confidence 56999999 699999999998764 32 454 4578999999988887752 111 233 445554 699999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhh
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNE 190 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~ 190 (429)
.|..+... ..++..|+++|.|.+- ++.+ ......+.+.++++|+.+..+.-.-+-..-..+..+++. .
T Consensus 72 i~tp~~~H---~~~~~~al~~GkhVl~EKP~a~~---~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~---g 142 (334)
T 3ohs_X 72 VGTQHPQH---KAAVMLCLAAGKAVLCEKPMGVN---AAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ---G 142 (334)
T ss_dssp ECCCGGGH---HHHHHHHHHTTCEEEEESSSSSS---HHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHH---T
T ss_pred ECCCcHHH---HHHHHHHHhcCCEEEEECCCCCC---HHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhc---C
Confidence 98865433 6888999999988652 1222 234446667788889888776443333322233444432 3
Q ss_pred cCCCCeEEEEEe
Q 014177 191 SKGEPERLRFSY 202 (429)
Q Consensus 191 ~~~~v~~i~~~~ 202 (429)
...++..++..+
T Consensus 143 ~iG~i~~v~~~~ 154 (334)
T 3ohs_X 143 TLGDLRVARAEF 154 (334)
T ss_dssp TTCSEEEEEEEE
T ss_pred CCCCeEEEEEEc
Confidence 456777777654
|
| >3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.001 Score=65.24 Aligned_cols=147 Identities=19% Similarity=0.174 Sum_probs=89.4
Q ss_pred CCCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
+++.+|.|+| +|.+|+. .+..|.+ .++++|+ ++++++++++ +..+ .+... .| ++++++ ++|+|
T Consensus 5 ~~~~rvgiiG-~G~~g~~~~~~~l~~-~~~~~l~av~d~~~~~~~---~~~~-~~~~~----~~---~~~ll~~~~~D~V 71 (364)
T 3e82_A 5 NNTINIALIG-YGFVGKTFHAPLIRS-VPGLNLAFVASRDEEKVK---RDLP-DVTVI----AS---PEAAVQHPDVDLV 71 (364)
T ss_dssp --CEEEEEEC-CSHHHHHTHHHHHHT-STTEEEEEEECSCHHHHH---HHCT-TSEEE----SC---HHHHHTCTTCSEE
T ss_pred CCcceEEEEC-CCHHHHHHHHHHHhh-CCCeEEEEEEcCCHHHHH---hhCC-CCcEE----CC---HHHHhcCCCCCEE
Confidence 3457999999 5999996 6666665 4678876 6688887654 2222 22221 33 455565 79999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
+.|..+... ..++..|+++|.|.+.=---..-......+.+.++++|+.+.++.-.-+...-..+..+++. -..
T Consensus 72 ~i~tp~~~H---~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~---g~i 145 (364)
T 3e82_A 72 VIASPNATH---APLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQ---GTL 145 (364)
T ss_dssp EECSCGGGH---HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH---TTT
T ss_pred EEeCChHHH---HHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHc---CCC
Confidence 999765433 68889999999887631110111234456677788899888776433232222233444432 345
Q ss_pred CCCeEEEEEe
Q 014177 193 GEPERLRFSY 202 (429)
Q Consensus 193 ~~v~~i~~~~ 202 (429)
.++..++..+
T Consensus 146 G~i~~~~~~~ 155 (364)
T 3e82_A 146 GAVKHFESHF 155 (364)
T ss_dssp CSEEEEEEEE
T ss_pred cceEEEEEEe
Confidence 6777777644
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.71 E-value=7.1e-05 Score=75.94 Aligned_cols=101 Identities=18% Similarity=0.277 Sum_probs=76.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
.|+|+|+| +|.+|+.+++.|.+. +++|++.++++++++++.+.++ +..+.+|.++++.|+++ ++++|++|-+.+
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~~~~--~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQDKYD--LRVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHHHSS--CEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHhcC--cEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 47899999 599999999999886 8999999999999999887763 78899999999999887 568999997654
Q ss_pred CCCCCchHHHH--HHHHHc-CCcE-EEeCCChhHH
Q 014177 118 PFQQAPKCTVL--EAAIET-KTAY-IDVCDDTIYS 148 (429)
Q Consensus 118 p~~~~~~~~v~--~aa~~~-gv~~-vdis~~~~~~ 148 (429)
- ...+++ ..|.+. ++.. +-...+..|.
T Consensus 78 ~----De~Nl~~~~~Ak~~~~~~~~iar~~~~~~~ 108 (461)
T 4g65_A 78 T----DETNMAACQVAFTLFNTPNRIARIRSPQYL 108 (461)
T ss_dssp C----HHHHHHHHHHHHHHHCCSSEEEECCCHHHH
T ss_pred C----hHHHHHHHHHHHHhcCCccceeEeccchhh
Confidence 2 123433 334443 4443 4445555554
|
| >1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00036 Score=70.19 Aligned_cols=154 Identities=15% Similarity=0.058 Sum_probs=95.0
Q ss_pred CCCCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
+++.+|.|+|+ |.+|+ ..++.|.+. ++++++ +++++.++++.+.+.++....-+. -..| ++++++ ++|+|
T Consensus 81 ~~~irigiIG~-G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~-~~~~---~~~ll~~~~vD~V 154 (433)
T 1h6d_A 81 DRRFGYAIVGL-GKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVDPRKIY-DYSN---FDKIAKDPKIDAV 154 (433)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCCGGGEE-CSSS---GGGGGGCTTCCEE
T ss_pred CCceEEEEECC-cHHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhCCCccccc-ccCC---HHHHhcCCCCCEE
Confidence 55679999995 99997 788888763 567764 778999988888776642100000 1233 344555 79999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESK 192 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~ 192 (429)
+-|..+... ..++..|+++|.|.+.=---..-......+.+.++++|+.+..+.-.-+-..-..+..+++ +...
T Consensus 155 ~iatp~~~h---~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~---~G~i 228 (433)
T 1h6d_A 155 YIILPNSLH---AEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIR---ENQL 228 (433)
T ss_dssp EECSCGGGH---HHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHH---TTSS
T ss_pred EEcCCchhH---HHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHHH---cCCC
Confidence 999865433 6788899999988653110011123444666778888888776643333322222333433 2345
Q ss_pred CCCeEEEEEe
Q 014177 193 GEPERLRFSY 202 (429)
Q Consensus 193 ~~v~~i~~~~ 202 (429)
.++..++..+
T Consensus 229 G~i~~v~~~~ 238 (433)
T 1h6d_A 229 GKLGMVTTDN 238 (433)
T ss_dssp CSEEEEEEEE
T ss_pred CCcEEEEEEE
Confidence 6777777643
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.71 E-value=4.9e-05 Score=74.46 Aligned_cols=97 Identities=16% Similarity=0.099 Sum_probs=64.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHhCC-----------CcEEEEeeCCChHHHHHH
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTLGK-----------NSEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l~~-----------~v~~~~~Dl~d~~~l~~~ 105 (429)
|+++|.|+||+|++|+.+++.|.++ ++++|+.+.++. ...+.+.+..+. .+.+... |.+ ++
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~-p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~ 79 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADH-PMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPK---HE 79 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTT---SG
T ss_pred ccceEEEECcCCHHHHHHHHHHhcC-CCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHH---HH
Confidence 3479999999999999999999874 678887775432 221222221110 1111111 222 24
Q ss_pred hc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 106 LR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 106 ~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
++ ++|+||-|++.+.. ...++.+++.|++.||.++.
T Consensus 80 ~~~~~DvV~~atp~~~~---~~~a~~~~~aG~~VId~s~~ 116 (354)
T 1ys4_A 80 EFEDVDIVFSALPSDLA---KKFEPEFAKEGKLIFSNASA 116 (354)
T ss_dssp GGTTCCEEEECCCHHHH---HHHHHHHHHTTCEEEECCST
T ss_pred hcCCCCEEEECCCchHH---HHHHHHHHHCCCEEEECCch
Confidence 45 89999999875432 56788889999999999875
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.70 E-value=7.5e-05 Score=69.15 Aligned_cols=84 Identities=21% Similarity=0.273 Sum_probs=51.9
Q ss_pred ccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--------------HHHHHHHhCCCc
Q 014177 24 KETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--------------GAAMVSTLGKNS 89 (429)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--------------~~~l~~~l~~~v 89 (429)
|...++.+....++.+++|.|+| +|.+|+.+++.|.+. |++|++.+|++++ .+.+.+.++ ..
T Consensus 4 ~~~~~~~~~~~~~~~~~kIgiIG-~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 79 (245)
T 3dtt_A 4 DKIHHHHHHENLYFQGMKIAVLG-TGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHP-HV 79 (245)
T ss_dssp ---------------CCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC-------CCHHHHGGGST-TC
T ss_pred ccccccccccccccCCCeEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcC-ce
Confidence 44555666666678889999998 699999999999997 7899999999887 444443332 11
Q ss_pred EEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 90 EFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
. ..+..++++++|+||.|..+.
T Consensus 80 ~--------~~~~~e~~~~aDvVilavp~~ 101 (245)
T 3dtt_A 80 H--------LAAFADVAAGAELVVNATEGA 101 (245)
T ss_dssp E--------EEEHHHHHHHCSEEEECSCGG
T ss_pred e--------ccCHHHHHhcCCEEEEccCcH
Confidence 1 122445677899999998654
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00013 Score=70.52 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=72.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHH---hCCCcEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVST---LGKNSEFA 92 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~---l~~~v~~~ 92 (429)
+.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|++. .|.+.+++. +.+.+++.
T Consensus 30 ~kL~~~~VlIvGa-GGlGs~va~~La~aGVg-~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~ 107 (340)
T 3rui_A 30 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDAT 107 (340)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEE
T ss_pred HHHhCCEEEEECC-CHHHHHHHHHHHHcCCC-EEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEE
Confidence 3567899999996 66999999999997432 899988754 344444433 33455554
Q ss_pred Eee--C--------------CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 93 EVN--I--------------YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 93 ~~D--l--------------~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
..+ + .+.+.+.++++++|+||+|...+.. -..+-++|.+.+++.|+.
T Consensus 108 ~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~t--R~lin~~c~~~~~plI~a 170 (340)
T 3rui_A 108 GVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES--RWLPSLLSNIENKTVINA 170 (340)
T ss_dssp EECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGG--GHHHHHHHHHTTCEEEEE
T ss_pred EEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHH--HHHHHHHHHHcCCcEEEe
Confidence 443 2 1234567788899999999875543 256778999999998864
|
| >3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00081 Score=67.23 Aligned_cols=152 Identities=16% Similarity=0.158 Sum_probs=96.4
Q ss_pred CCCCeEEEEcCChH---HHHHHHHHHhHcCCCceEE--EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh----c
Q 014177 37 NRNARVLVLGGTGR---VGGSTAVALSKLCPDLQIV--VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL----R 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~---iG~~l~~~L~~~~~g~~v~--v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~----~ 107 (429)
|++.+|.|+|+ |. +|..-+..+... ++++++ ++++++++++++++.++-.... -..|.+++-+-- .
T Consensus 35 m~~~rvgiiG~-G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~g~~~~~---~~~~~~~ll~~~~~~~~ 109 (417)
T 3v5n_A 35 QKRIRLGMVGG-GSGAFIGAVHRIAARLD-DHYELVAGALSSTPEKAEASGRELGLDPSR---VYSDFKEMAIREAKLKN 109 (417)
T ss_dssp CCCEEEEEESC-C--CHHHHHHHHHHHHT-SCEEEEEEECCSSHHHHHHHHHHHTCCGGG---BCSCHHHHHHHHHHCTT
T ss_pred CCcceEEEEcC-CCchHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHcCCCccc---ccCCHHHHHhcccccCC
Confidence 56679999995 65 999888887764 467776 5699999999988877521000 123444433221 3
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
++|+|+.|..+... ..++.+|+++|.|.+- ++.+. .....+.+.++++|+.+.++.-.-+-..-..++.++
T Consensus 110 ~vD~V~I~tp~~~H---~~~~~~al~aGkhVl~EKPla~~~---~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 183 (417)
T 3v5n_A 110 GIEAVAIVTPNHVH---YAAAKEFLKRGIHVICDKPLTSTL---ADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMI 183 (417)
T ss_dssp CCSEEEECSCTTSH---HHHHHHHHTTTCEEEEESSSCSSH---HHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHH
T ss_pred CCcEEEECCCcHHH---HHHHHHHHhCCCeEEEECCCcCCH---HHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHH
Confidence 59999988765433 6889999999988653 22222 244466677888998887764433433333344444
Q ss_pred HHHHhhcCCCCeEEEEEe
Q 014177 185 RVARNESKGEPERLRFSY 202 (429)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~ 202 (429)
+ +-...++..++..|
T Consensus 184 ~---~G~iG~i~~v~~~~ 198 (417)
T 3v5n_A 184 E---NGDIGAVRLVQMEY 198 (417)
T ss_dssp H---TTTTCSEEEEEEEE
T ss_pred h---cCCCCCeEEEEEEE
Confidence 3 23456777777654
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=3.8e-05 Score=75.24 Aligned_cols=96 Identities=19% Similarity=0.175 Sum_probs=64.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----------CCcEEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----------KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----------~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
+.+|.|+||+|++|..+.+.|.+ +|..++..+..+....+.+.+.++ ....+. ++ +.+ .+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~----~~~ 78 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK----LMD 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG----GCT
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH----Hhc
Confidence 46899999999999999998877 588888766543333233332211 011111 21 222 246
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++|+||-|++.... ...+..+.+.|++.||+|++.
T Consensus 79 ~vDvvf~a~p~~~s---~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpl_A 79 DVDIIFSPLPQGAA---GPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTTH---HHHHHHHHHTTCEEEECSSTT
T ss_pred CCCEEEECCChHHH---HHHHHHHHHCCCEEEEcCCCc
Confidence 89999999875443 577888899999999999764
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=3.8e-05 Score=75.24 Aligned_cols=96 Identities=19% Similarity=0.175 Sum_probs=64.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----------CCcEEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----------KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----------~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
+.+|.|+||+|++|..+.+.|.+ +|..++..+..+....+.+.+.++ ....+. ++ +.+ .+.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~--~~-~~~----~~~ 78 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK--PT-DPK----LMD 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE--EC-CGG----GCT
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCChhHhcccccccccccccccceEE--eC-CHH----Hhc
Confidence 46899999999999999998877 588888766543333233332211 011111 21 222 246
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
++|+||-|++.... ...+..+.+.|++.||+|++.
T Consensus 79 ~vDvvf~a~p~~~s---~~~a~~~~~~G~~vIDlSa~~ 113 (359)
T 4dpk_A 79 DVDIIFSPLPQGAA---GPVEEQFAKEGFPVISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTTH---HHHHHHHHHTTCEEEECSSTT
T ss_pred CCCEEEECCChHHH---HHHHHHHHHCCCEEEEcCCCc
Confidence 89999999875443 577888899999999999764
|
| >1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00059 Score=66.24 Aligned_cols=151 Identities=17% Similarity=0.105 Sum_probs=95.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
.++.+|.|+|+++.+|+..+..|.+..+++++ .++|+++++++++++.++. .. . .+| ++++++ ++|+|+
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~-~~-~---~~~---~~~ll~~~~vD~V~ 87 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN-PA-V---FDS---YEELLESGLVDAVD 87 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS-CE-E---ESC---HHHHHHSSCCSEEE
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCC-Cc-c---cCC---HHHHhcCCCCCEEE
Confidence 34578999995338999999998774257776 5678999999988887752 11 1 133 444554 699999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
-|..+... ..++.+|+++|.|.+-=---..-......+.+.++++|+.+..+.-.-+-..-..+..+++ +....
T Consensus 88 i~tp~~~H---~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~---~g~iG 161 (340)
T 1zh8_A 88 LTLPVELN---LPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVE---SGAIG 161 (340)
T ss_dssp ECCCGGGH---HHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHH---TTTTS
T ss_pred EeCCchHH---HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHh---cCCCC
Confidence 99865433 6888999999987653110011123444666778889988877644333333323344443 23345
Q ss_pred CCeEEEEE
Q 014177 194 EPERLRFS 201 (429)
Q Consensus 194 ~v~~i~~~ 201 (429)
++..++..
T Consensus 162 ~i~~v~~~ 169 (340)
T 1zh8_A 162 DPVFMNWQ 169 (340)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 67777764
|
| >1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00013 Score=71.57 Aligned_cols=149 Identities=14% Similarity=0.126 Sum_probs=93.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhc--CccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALR--DVDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~--~~Dv 111 (429)
+++++|.|+|+ |.+|+..++.|.+. ++.+++ ++++++++++.+.+.++- .... ..| ++++++ ++|+
T Consensus 4 ~~~~~vgiiG~-G~ig~~~~~~l~~~-~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~----~~~---~~~ll~~~~~D~ 74 (362)
T 1ydw_A 4 ETQIRIGVMGC-ADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANNYPESTKI----HGS---YESLLEDPEIDA 74 (362)
T ss_dssp --CEEEEEESC-CTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESS---HHHHHHCTTCCE
T ss_pred CCceEEEEECc-hHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhCCCCCCee----eCC---HHHHhcCCCCCE
Confidence 34579999995 99999999998874 577764 678999988888877641 1111 123 445554 6999
Q ss_pred EEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC--CCccchhHHHHHHHHHHHHh
Q 014177 112 VVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG--GIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 112 Vi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~--g~~pG~s~~~a~~~~~~~~~ 189 (429)
|+.|..+... ..++..|+++|.|.+.-.--..-......+.+.++++|+.+..+. .+.|..-+ +..+++ +
T Consensus 75 V~i~tp~~~h---~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~r~~p~~~~--~~~~i~---~ 146 (362)
T 1ydw_A 75 LYVPLPTSLH---VEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPRTAL--LKEFLS---D 146 (362)
T ss_dssp EEECCCGGGH---HHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCGGGSGGGTT--TTTGGG---C
T ss_pred EEEcCChHHH---HHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEeeccCHHHHH--HHHHHH---h
Confidence 9999865433 678889999998876311111112344567777888898887664 33455432 222221 1
Q ss_pred h-cCCCCeEEEEEe
Q 014177 190 E-SKGEPERLRFSY 202 (429)
Q Consensus 190 ~-~~~~v~~i~~~~ 202 (429)
. ...++..++..+
T Consensus 147 g~~iG~i~~v~~~~ 160 (362)
T 1ydw_A 147 SERFGQLKTVQSCF 160 (362)
T ss_dssp TTTTCSEEEEEEEE
T ss_pred cCCccceEEEEEEE
Confidence 1 245666666543
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0013 Score=64.50 Aligned_cols=153 Identities=16% Similarity=0.069 Sum_probs=93.2
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhH------cCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSK------LCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~------~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
.+|++-||.|+| +|++|+.=++.+.+ ..++.+|+ ++|++++++++++++++. .... +|. +++++
T Consensus 21 ~~MkkirvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~--~~~y---~d~---~ell~ 91 (393)
T 4fb5_A 21 QSMKPLGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF--EKAT---ADW---RALIA 91 (393)
T ss_dssp ---CCCEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC--SEEE---SCH---HHHHH
T ss_pred cCCCCccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC--Ceec---CCH---HHHhc
Confidence 346667899999 69999876655533 12456665 578999999999988752 2121 343 44454
Q ss_pred --CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHH
Q 014177 108 --DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 108 --~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~ 185 (429)
++|+|+.|..+... ..++.+|+++|.|.+-=---..-......+.+.++++|+.+.++--.-+-..-..+..+++
T Consensus 92 ~~~iDaV~IatP~~~H---~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~ 168 (393)
T 4fb5_A 92 DPEVDVVSVTTPNQFH---AEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVG 168 (393)
T ss_dssp CTTCCEEEECSCGGGH---HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHH
T ss_pred CCCCcEEEECCChHHH---HHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHH
Confidence 69999999866543 6889999999998762100011123445667788899988877644333333333444443
Q ss_pred HHHhhcCCCCeEEEEEe
Q 014177 186 VARNESKGEPERLRFSY 202 (429)
Q Consensus 186 ~~~~~~~~~v~~i~~~~ 202 (429)
+-...++..++..+
T Consensus 169 ---~G~iG~i~~v~~~~ 182 (393)
T 4fb5_A 169 ---DGVIGRVNHVRVEM 182 (393)
T ss_dssp ---TTTTCSEEEEEEEE
T ss_pred ---cCCCccccceeeee
Confidence 23456777777654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00012 Score=66.99 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=53.5
Q ss_pred CCCeEEEEcC----------------ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH
Q 014177 38 RNARVLVLGG----------------TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS 101 (429)
Q Consensus 38 ~~~~VlV~Ga----------------~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~ 101 (429)
.+|+|||||| +|.+|.++++.|+++ |++|++++|+..... ..+..+ ...|+...++
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~--Ga~V~lv~~~~~~~~----~~~~~~--~~~~v~s~~e 73 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSA--GYEVCLITTKRALKP----EPHPNL--SIREITNTKD 73 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHT--TCEEEEEECTTSCCC----CCCTTE--EEEECCSHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHC--CCEEEEEeCCccccc----cCCCCe--EEEEHhHHHH
Confidence 3689999999 899999999999998 899999998753210 011233 3456666544
Q ss_pred HH----HHhcCccEEEecCCCCC
Q 014177 102 LL----MALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 102 l~----~~~~~~DvVi~~agp~~ 120 (429)
+. +.+.++|++||+|+...
T Consensus 74 m~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 74 LLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHHGGGCSEEEECSBCCS
T ss_pred HHHHHHHhcCCCCEEEEcCcccc
Confidence 33 34458999999998643
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.67 E-value=6.5e-05 Score=69.47 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|+|+||.|+|+ |.+|+.+++.+.++ ++ +++. ++|+.+. .. .+. -.+++++++ ++|+||.+
T Consensus 1 M~MmkI~ViGa-GrMG~~i~~~l~~~-~~-eLva~~d~~~~~------~~--gv~-------v~~dl~~l~-~~DVvIDf 61 (243)
T 3qy9_A 1 MASMKILLIGY-GAMNQRVARLAEEK-GH-EIVGVIENTPKA------TT--PYQ-------QYQHIADVK-GADVAIDF 61 (243)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHT-TC-EEEEEECSSCC--------C--CSC-------BCSCTTTCT-TCSEEEEC
T ss_pred CCceEEEEECc-CHHHHHHHHHHHhC-CC-EEEEEEecCccc------cC--CCc-------eeCCHHHHh-CCCEEEEe
Confidence 34689999998 99999999999985 45 7665 5666542 11 111 112233445 89999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccchh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
+.|... ...++ +++|++.|.-+. .+.. +...+.+.++ .++++....++.|..
T Consensus 62 t~p~a~---~~~~~--l~~g~~vVigTT--G~s~e~~~~l~~aa~--~~~v~~a~N~S~Gv~ 114 (243)
T 3qy9_A 62 SNPNLL---FPLLD--EDFHLPLVVATT--GEKEKLLNKLDELSQ--NMPVFFSANMSYGVH 114 (243)
T ss_dssp SCHHHH---HHHHT--SCCCCCEEECCC--SSHHHHHHHHHHHTT--TSEEEECSSCCHHHH
T ss_pred CChHHH---HHHHH--HhcCCceEeCCC--CCCHHHHHHHHHHHh--cCCEEEECCccHHHH
Confidence 876432 34444 788888874332 2332 2234444433 367888878887763
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00042 Score=66.42 Aligned_cols=71 Identities=17% Similarity=0.199 Sum_probs=54.1
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.....+++|.|+| .|.+|..+++.|++. |++|++.+|++++.+.+.+. .+.. . .++.++++++|+||
T Consensus 16 ~~~~~m~~I~iIG-~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~---g~~~----~---~~~~~~~~~aDvvi 82 (310)
T 3doj_A 16 PRGSHMMEVGFLG-LGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEH---GASV----C---ESPAEVIKKCKYTI 82 (310)
T ss_dssp --CCCSCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT---TCEE----C---SSHHHHHHHCSEEE
T ss_pred cccccCCEEEEEC-ccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC---CCeE----c---CCHHHHHHhCCEEE
Confidence 3345678999999 699999999999997 78999999999998887642 2221 1 23455667899999
Q ss_pred ecCC
Q 014177 114 HAAG 117 (429)
Q Consensus 114 ~~ag 117 (429)
-|..
T Consensus 83 ~~vp 86 (310)
T 3doj_A 83 AMLS 86 (310)
T ss_dssp ECCS
T ss_pred EEcC
Confidence 8874
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.65 E-value=2.4e-05 Score=76.15 Aligned_cols=84 Identities=13% Similarity=0.187 Sum_probs=56.5
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
+.|.++||.|+|++|+||+.++..|+.++...+|++.|++.++++..+.++.. ..+...++.-..+..+.++++|+||.
T Consensus 4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~-~~~~~~~i~~t~d~~~al~dADvVvi 82 (343)
T 3fi9_A 4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRH-CGFEGLNLTFTSDIKEALTDAKYIVS 82 (343)
T ss_dssp CCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHH-HCCTTCCCEEESCHHHHHTTEEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhh-CcCCCCceEEcCCHHHHhCCCCEEEE
Confidence 56778999999988999999999998873334899999998877754433320 00000011111234567889999999
Q ss_pred cCCCC
Q 014177 115 AAGPF 119 (429)
Q Consensus 115 ~agp~ 119 (429)
++|..
T Consensus 83 taG~p 87 (343)
T 3fi9_A 83 SGGAP 87 (343)
T ss_dssp CCC--
T ss_pred ccCCC
Confidence 99854
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=3.5e-05 Score=72.74 Aligned_cols=127 Identities=14% Similarity=0.127 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++++|+|+ |.+|+.++..|.+. |. +|++++|+.+++++++. .+... ..+++.+.+.++|+|||+
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~----~~~~~-----~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKI--VRPTLTVANRTMSRFNNWSL----NINKI-----NLSHAESHLDEFDIIINT 182 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCS----CCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHH----hcccc-----cHhhHHHHhcCCCEEEEC
Confidence 46789999996 67999999999987 67 89999999988765542 22221 345577778899999999
Q ss_pred CCCC--CCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 116 AGPF--QQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 116 agp~--~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
.+.- .... ..+-...+..+.-.+|+...+.. ..+...+++.|..++.| + .++..+.+..+
T Consensus 183 Tp~Gm~~~~~-~~l~~~~l~~~~~V~D~vY~P~~----T~ll~~A~~~G~~~~~G------l-~MLv~Qa~~~f 244 (277)
T 3don_A 183 TPAGMNGNTD-SVISLNRLASHTLVSDIVYNPYK----TPILIEAEQRGNPIYNG------L-DMFVHQGAESF 244 (277)
T ss_dssp CC-------C-CSSCCTTCCSSCEEEESCCSSSS----CHHHHHHHHTTCCEECT------H-HHHHHHHHHHH
T ss_pred ccCCCCCCCc-CCCCHHHcCCCCEEEEecCCCCC----CHHHHHHHHCcCEEeCC------H-HHHHHHHHHHH
Confidence 7421 1100 01111223345556888866432 24556778888776444 2 45566666544
|
| >3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0012 Score=64.23 Aligned_cols=147 Identities=16% Similarity=0.120 Sum_probs=88.5
Q ss_pred CCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 38 RNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
++.+|.|+| +|.+|+. .+..|.+ .++++|+ ++++++++++ +..+ .+.. ..| ++++++ ++|+|+
T Consensus 6 ~~~rvgiiG-~G~~g~~~~~~~~~~-~~~~~l~av~d~~~~~~~---~~~~-~~~~----~~~---~~~ll~~~~vD~V~ 72 (352)
T 3kux_A 6 DKIKVGLLG-YGYASKTFHAPLIMG-TPGLELAGVSSSDASKVH---ADWP-AIPV----VSD---PQMLFNDPSIDLIV 72 (352)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHHHT-STTEEEEEEECSCHHHHH---TTCS-SCCE----ESC---HHHHHHCSSCCEEE
T ss_pred CCceEEEEC-CCHHHHHHHHHHHhh-CCCcEEEEEECCCHHHHH---hhCC-CCce----ECC---HHHHhcCCCCCEEE
Confidence 347899999 6999997 6777766 4678876 6788887655 2221 1221 133 445555 599999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+..+.-.-+-..-..+..+++. -...
T Consensus 73 i~tp~~~H---~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~---g~iG 146 (352)
T 3kux_A 73 IPTPNDTH---FPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAE---GSLG 146 (352)
T ss_dssp ECSCTTTH---HHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHH---TTTC
T ss_pred EeCChHHH---HHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhc---CCCC
Confidence 99855433 68889999999877631100111234446677788889887765432222222223334332 3456
Q ss_pred CCeEEEEEee
Q 014177 194 EPERLRFSYY 203 (429)
Q Consensus 194 ~v~~i~~~~~ 203 (429)
++..++..+.
T Consensus 147 ~i~~~~~~~~ 156 (352)
T 3kux_A 147 NVVYFESHFD 156 (352)
T ss_dssp SEEEEEEEEE
T ss_pred ceEEEEEEEe
Confidence 7777776543
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=7.5e-05 Score=69.89 Aligned_cols=113 Identities=25% Similarity=0.337 Sum_probs=76.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++.+ +++|+|+ |.+|+.+++.|.+. +++|++++|+.++++++.+.++. . ..+ +.++ +++|+||+|
T Consensus 114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~~~~--~-----~~~---~~~~-~~~Divi~~ 178 (263)
T 2d5c_A 114 PLKG-PALVLGA-GGAGRAVAFALREA--GLEVWVWNRTPQRALALAEEFGL--R-----AVP---LEKA-REARLLVNA 178 (263)
T ss_dssp CCCS-CEEEECC-SHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHTC--E-----ECC---GGGG-GGCSEEEEC
T ss_pred CCCC-eEEEECC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcc--c-----hhh---Hhhc-cCCCEEEEc
Confidence 4567 9999995 77999999999987 56999999999998888877642 2 123 3345 789999999
Q ss_pred CCCCCCCchHHHH-HHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 116 AGPFQQAPKCTVL-EAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 116 agp~~~~~~~~v~-~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
.++.........+ ..+++.|...+|++....-. .+.+.+++.|...+.
T Consensus 179 tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t----~l~~~a~~~g~~~v~ 227 (263)
T 2d5c_A 179 TRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWT----RFLREAKAKGLKVQT 227 (263)
T ss_dssp SSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSC----HHHHHHHHTTCEEEC
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEeecCCccc----HHHHHHHHCcCEEEC
Confidence 9754210000111 23456677888988653211 244556677776543
|
| >3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00011 Score=70.68 Aligned_cols=142 Identities=20% Similarity=0.199 Sum_probs=88.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
.++++|.|+|+ |.+|+..++.|.+. ++.+++ ++++++++++++.+ .+. . ..| ++++++ ++|+|+
T Consensus 8 ~~~~~igiIG~-G~~g~~~~~~l~~~-~~~~~v~v~d~~~~~~~~~~~----~~~---~-~~~---~~~~l~~~~~D~V~ 74 (315)
T 3c1a_A 8 NSPVRLALIGA-GRWGKNYIRTIAGL-PGAALVRLASSNPDNLALVPP----GCV---I-ESD---WRSVVSAPEVEAVI 74 (315)
T ss_dssp -CCEEEEEEEC-TTTTTTHHHHHHHC-TTEEEEEEEESCHHHHTTCCT----TCE---E-ESS---THHHHTCTTCCEEE
T ss_pred CCcceEEEECC-cHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHh----hCc---c-cCC---HHHHhhCCCCCEEE
Confidence 34579999995 99999999999884 567755 78898877654332 221 1 223 344554 799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC--CccchhHHHHHHHHHHHHhhc
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG--IYPGVSNVMAAELVRVARNES 191 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g--~~pG~s~~~a~~~~~~~~~~~ 191 (429)
.|..+... ..++..|+++|.|.+.-..-..-......+.+.++++|+.+..+.- +.|..-+ +..+++ .
T Consensus 75 i~tp~~~h---~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~--~~~~i~-----~ 144 (315)
T 3c1a_A 75 IATPPATH---AEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEA--LKADLT-----S 144 (315)
T ss_dssp EESCGGGH---HHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHH--HHHTHH-----H
T ss_pred EeCChHHH---HHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHH--HHHHHH-----H
Confidence 99866443 6788899999987652111111123444666778888988776643 3344332 333333 2
Q ss_pred CCCCeEEEEE
Q 014177 192 KGEPERLRFS 201 (429)
Q Consensus 192 ~~~v~~i~~~ 201 (429)
..++..++..
T Consensus 145 lG~i~~v~~~ 154 (315)
T 3c1a_A 145 IGPILAVRSE 154 (315)
T ss_dssp HCSEEEEEEE
T ss_pred cCCeEEEEEE
Confidence 3466666664
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.63 E-value=8.4e-05 Score=73.21 Aligned_cols=101 Identities=20% Similarity=0.240 Sum_probs=63.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhC-----------CCcEEEEeeCCChHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLG-----------KNSEFAEVNIYNEGSL 102 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~-----------~~v~~~~~Dl~d~~~l 102 (429)
..|++++|.|+||+|++|..+++.|.+ +|..++..+ ..+....+.+.+..+ ....+. |+.+.+
T Consensus 15 ~~M~~~kVaIvGAtG~vG~ell~lL~~-hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~--~~~~~~-- 89 (381)
T 3hsk_A 15 SHMSVKKAGVLGATGSVGQRFILLLSK-HPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQ--ECKPEG-- 89 (381)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTT-CSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCE--ESSSCT--
T ss_pred ccCCccEEEEECCCChHHHHHHHHHHc-CCCceEEEeeccccccCCCHHHhcccccccccccccccceEE--eCchhh--
Confidence 346778999999999999999998887 577888543 222222222222111 011222 222211
Q ss_pred HHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 103 LMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 103 ~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.++++|+||-|++.... ..++..+.+.|++.||+|++.
T Consensus 90 --~~~~~Dvvf~alp~~~s---~~~~~~~~~~G~~VIDlSa~f 127 (381)
T 3hsk_A 90 --NFLECDVVFSGLDADVA---GDIEKSFVEAGLAVVSNAKNY 127 (381)
T ss_dssp --TGGGCSEEEECCCHHHH---HHHHHHHHHTTCEEEECCSTT
T ss_pred --hcccCCEEEECCChhHH---HHHHHHHHhCCCEEEEcCCcc
Confidence 24689999999764322 567778889999999999753
|
| >1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00058 Score=67.08 Aligned_cols=123 Identities=19% Similarity=0.129 Sum_probs=79.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEE--EecCchhHHHHHHHhCCCcEEEEeeCCChH---------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPD-LQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIYNEG--------------- 100 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~--------------- 100 (429)
|++|.|+|+||.||+..++.+.+ +++ ++++. ++++.+++.+...+++.+ .....|-....
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~-~p~~~~v~al~ag~ni~~l~~~~~~f~~~-~v~v~d~~~~~~l~~~l~~~~~~v~~ 81 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIER-NLDRYQVIALTANRNVKDLADAAKRTNAK-RAVIADPSLYNDLKEALAGSSVEAAA 81 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-TGGGEEEEEEEESSCHHHHHHHHHHTTCS-EEEESCGGGHHHHHHHTTTCSSEEEE
T ss_pred ceEEEEECCCeEeHHHHHHHHHh-CcCcEEEEEEEcCCCHHHHHHHHHHcCCc-EEEEcChHHHHHHHHHhccCCcEEEe
Confidence 37899999999999999999887 455 67653 688888888877776532 22233432222
Q ss_pred ---HHHHHhc-CccEEEecC-CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 101 ---SLLMALR-DVDLVVHAA-GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 101 ---~l~~~~~-~~DvVi~~a-gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
.+.+++. .+|+|+.+. |.. | .....+|+++|.|.+-.+-+ .....-..+.+.++++|+.++|.
T Consensus 82 g~~~~~el~~~~iDvVV~ai~G~a---G-l~ptlaAi~aGK~VvlANKE-~lv~~G~~l~~~A~~~gv~liPV 149 (388)
T 1r0k_A 82 GADALVEAAMMGADWTMAAIIGCA---G-LKATLAAIRKGKTVALANKE-SLVSAGGLMIDAVREHGTTLLPV 149 (388)
T ss_dssp SHHHHHHHHTSCCSEEEECCCSGG---G-HHHHHHHHHTTSEEEECCSH-HHHTTHHHHHHHHHHHTCEEEEC
T ss_pred CccHHHHHHcCCCCEEEEeCCCHH---H-HHHHHHHHHCCCEEEEeCcH-HHHhhHHHHHHHHHHcCCEEEEe
Confidence 2223332 389999998 422 3 56667889999777744432 22222224556777888887553
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.61 E-value=9.2e-05 Score=72.05 Aligned_cols=94 Identities=20% Similarity=0.205 Sum_probs=61.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEe-cC-chhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGS-RN-REKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~-R~-~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+++|.|+||+|++|+.+++.|.++ ++..+++.+. ++ ..+. + .+. .. ..++.+.+ . +.++++|+||.|
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~--~--~~~-g~---~i~~~~~~-~-~~~~~~DvV~~a 75 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR--M--GFA-ES---SLRVGDVD-S-FDFSSVGLAFFA 75 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE--E--EET-TE---EEECEEGG-G-CCGGGCSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc--c--ccC-Cc---ceEEecCC-H-HHhcCCCEEEEc
Confidence 468999999999999999999853 3566766554 32 2110 0 011 11 22222221 1 125689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+|.+.. ...++.+++.|++.||+++..
T Consensus 76 ~g~~~s---~~~a~~~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 76 AAAEVS---RAHAERARAAGCSVIDLSGAL 102 (340)
T ss_dssp SCHHHH---HHHHHHHHHTTCEEEETTCTT
T ss_pred CCcHHH---HHHHHHHHHCCCEEEEeCCCC
Confidence 875432 578888899999999998653
|
| >4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00096 Score=66.44 Aligned_cols=148 Identities=18% Similarity=0.194 Sum_probs=95.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcC-------CCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--Cc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLC-------PDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DV 109 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~-------~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~ 109 (429)
.||.|+| +|++|+.-++.|.+.. ++.+|+ ++|++++++++++++++. .... +| ++++++ ++
T Consensus 27 lrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~--~~~y---~d---~~~ll~~~~v 97 (412)
T 4gqa_A 27 LNIGLIG-SGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGA--EKAY---GD---WRELVNDPQV 97 (412)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTC--SEEE---SS---HHHHHHCTTC
T ss_pred ceEEEEc-CcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCC--CeEE---CC---HHHHhcCCCC
Confidence 5899999 6999998888776531 134555 578999999999988752 1121 34 344554 69
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
|+|+.|..+... ..++.+|+++|.|.+-=---..-......+.+.++++|+.+.++.-.-+...-..++.+++.
T Consensus 98 D~V~I~tp~~~H---~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--- 171 (412)
T 4gqa_A 98 DVVDITSPNHLH---YTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQIIAR--- 171 (412)
T ss_dssp CEEEECSCGGGH---HHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHHHH---
T ss_pred CEEEECCCcHHH---HHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHHhc---
Confidence 999988765443 68899999999887521100111234446667788889888776544444444444555542
Q ss_pred hcCCCCeEEEEEe
Q 014177 190 ESKGEPERLRFSY 202 (429)
Q Consensus 190 ~~~~~v~~i~~~~ 202 (429)
-...++..++..+
T Consensus 172 G~iG~i~~~~~~~ 184 (412)
T 4gqa_A 172 GDIGEPVRFRGTF 184 (412)
T ss_dssp TTTCSEEEEEEEE
T ss_pred CCcCCeEEEEEEe
Confidence 3456777777654
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00016 Score=70.98 Aligned_cols=76 Identities=25% Similarity=0.322 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++.++|+|+|+ |.+|+.+++.+... |.+|++.+|++++++.+.+.....+. .+..+.+.+.+.++++|+||||+
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~DvVI~~~ 238 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVE---LLYSNSAEIETAVAEADLLIGAV 238 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSE---EEECCHHHHHHHHHTCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCceeE---eeeCCHHHHHHHHcCCCEEEECC
Confidence 56689999997 88999999999987 77999999999998877654432222 22234556777788999999998
Q ss_pred CC
Q 014177 117 GP 118 (429)
Q Consensus 117 gp 118 (429)
+.
T Consensus 239 ~~ 240 (361)
T 1pjc_A 239 LV 240 (361)
T ss_dssp CC
T ss_pred Cc
Confidence 64
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00062 Score=64.69 Aligned_cols=112 Identities=29% Similarity=0.345 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+.+++|+|+| +|.+|+.+++.|... |.+|++.+|+.++.+.+. .++ ++.+ + .+++.++++++|+|+++
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~-~~g--~~~~--~---~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAAL--GAKVKVGARESDLLARIA-EMG--MEPF--H---ISKAAQELRDVDVCINT 220 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH-HTT--SEEE--E---GGGHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHH-HCC--Ceec--C---hhhHHHHhcCCCEEEEC
Confidence 57889999999 588999999999886 789999999987765543 232 3322 2 24577888999999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
++. +..+ ...++ ..+.+.-.||++....-. .+ +.++..|+.++
T Consensus 221 ~p~-~~i~-~~~l~-~mk~~~~lin~ar~~~~~----~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 221 IPA-LVVT-ANVLA-EMPSHTFVIDLASKPGGT----DF-RYAEKRGIKAL 263 (293)
T ss_dssp CSS-CCBC-HHHHH-HSCTTCEEEECSSTTCSB----CH-HHHHHHTCEEE
T ss_pred CCh-HHhC-HHHHH-hcCCCCEEEEecCCCCCC----CH-HHHHHCCCEEE
Confidence 854 2222 23333 345677788888532111 12 34455676553
|
| >3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00071 Score=66.16 Aligned_cols=144 Identities=15% Similarity=0.128 Sum_probs=89.3
Q ss_pred CCCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
|++.+|.|+| +|.+|+. .+..|.+ .++++|+ ++++++++ +.+.++ .+... .| ++++++ ++|+|
T Consensus 3 m~~~rvgiiG-~G~~g~~~~~~~l~~-~~~~~l~av~d~~~~~---~~~~~~-~~~~~----~~---~~~ll~~~~vD~V 69 (358)
T 3gdo_A 3 LDTIKVGILG-YGLSGSVFHGPLLDV-LDEYQISKIMTSRTEE---VKRDFP-DAEVV----HE---LEEITNDPAIELV 69 (358)
T ss_dssp TTCEEEEEEC-CSHHHHHTTHHHHTT-CTTEEEEEEECSCHHH---HHHHCT-TSEEE----SS---THHHHTCTTCCEE
T ss_pred CCcceEEEEc-cCHHHHHHHHHHHhh-CCCeEEEEEEcCCHHH---HHhhCC-CCceE----CC---HHHHhcCCCCCEE
Confidence 4567999999 5999996 6777766 4678875 56788765 333332 22221 23 344555 79999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
+.|..+... ..++..|+++|.|.+. ++.+ ......+.+.++++|+.+.++.-.-+...-..+..+++ +
T Consensus 70 ~i~tp~~~H---~~~~~~al~aGkhVl~EKPla~~---~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~---~ 140 (358)
T 3gdo_A 70 IVTTPSGLH---YEHTMACIQAGKHVVMEKPMTAT---AEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLIS---E 140 (358)
T ss_dssp EECSCTTTH---HHHHHHHHHTTCEEEEESSCCSS---HHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHH---T
T ss_pred EEcCCcHHH---HHHHHHHHHcCCeEEEecCCcCC---HHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHh---c
Confidence 999865433 6889999999988763 1222 23444666778888888776643223222222344443 2
Q ss_pred hcCCCCeEEEEEe
Q 014177 190 ESKGEPERLRFSY 202 (429)
Q Consensus 190 ~~~~~v~~i~~~~ 202 (429)
-...++..++..+
T Consensus 141 g~iG~i~~~~~~~ 153 (358)
T 3gdo_A 141 GSLEDINTYQVSY 153 (358)
T ss_dssp TSSCSCCEEEEEC
T ss_pred CCCCceEEEEEEE
Confidence 3456777777654
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00018 Score=71.04 Aligned_cols=76 Identities=21% Similarity=0.175 Sum_probs=61.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+.+++|+|+|+ |.+|+.+++.+... |++|++.||++++++.+.+.++..+ ..+..+.+++.+.++++|+||+|
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEEC
Confidence 467899999997 89999999999886 7899999999998877766554332 23444566788888899999999
Q ss_pred CC
Q 014177 116 AG 117 (429)
Q Consensus 116 ag 117 (429)
++
T Consensus 239 ~~ 240 (377)
T 2vhw_A 239 VL 240 (377)
T ss_dssp CC
T ss_pred CC
Confidence 86
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00016 Score=69.84 Aligned_cols=75 Identities=24% Similarity=0.213 Sum_probs=56.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHH----HHHhc-CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSL----LMALR-DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l----~~~~~-~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+++.++++.+ ++++. . ..+|..+.+++ .+... ++|+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~-~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYL-KQIGF--D-AAFNYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH-HHTTC--S-EEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH-HhcCC--c-EEEecCCHHHHHHHHHHHhCCCCeEE
Confidence 4589999999999999999999887 78999999998887766 55542 2 34587762223 22222 69999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|||+|.
T Consensus 219 i~~~g~ 224 (333)
T 1v3u_A 219 FDNVGG 224 (333)
T ss_dssp EESSCH
T ss_pred EECCCh
Confidence 999983
|
| >3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00088 Score=66.20 Aligned_cols=146 Identities=18% Similarity=0.080 Sum_probs=93.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+++|.|+|+++.+|...+..|.+. ++++++ ++++++++++++++.++ +.. ..| ++++++ ++|+|+.+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~g--~~~----~~~---~~ell~~~~vD~V~i~ 71 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-PDAQIVAACDPNEDVRERFGKEYG--IPV----FAT---LAEMMQHVQMDAVYIA 71 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-TTEEEEEEECSCHHHHHHHHHHHT--CCE----ESS---HHHHHHHSCCSEEEEC
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHHcC--CCe----ECC---HHHHHcCCCCCEEEEc
Confidence 468999996448999999998874 677776 67899999888887764 321 134 344444 69999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEP 195 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v 195 (429)
..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+..+.-.-+...-..+..+++. -...++
T Consensus 72 tp~~~H---~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~---g~iG~i 145 (387)
T 3moi_A 72 SPHQFH---CEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQE---GSVGRV 145 (387)
T ss_dssp SCGGGH---HHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHH---CTTCCE
T ss_pred CCcHHH---HHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhc---CCCCCe
Confidence 866433 68899999999887631110111234446667788889888766433333222233444432 235566
Q ss_pred eEEEE
Q 014177 196 ERLRF 200 (429)
Q Consensus 196 ~~i~~ 200 (429)
..++.
T Consensus 146 ~~~~~ 150 (387)
T 3moi_A 146 SMLNC 150 (387)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66665
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00016 Score=70.73 Aligned_cols=105 Identities=21% Similarity=0.244 Sum_probs=73.6
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHH---hCCC--c
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVST---LGKN--S 89 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~---l~~~--v 89 (429)
++.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|++. .|.+.+++. +.+. +
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg-~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 190 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIG-EIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISV 190 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCC-eEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeE
Confidence 56677899999996 66999999999998432 899998763 233333332 3333 4
Q ss_pred EEEEeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 90 EFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 90 ~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+.+..++++...+.+ ++++|+||+|...+.. ....+-++|.+.++++|..+
T Consensus 191 ~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~-~r~~ln~~c~~~~~p~i~~~ 241 (353)
T 3h5n_A 191 SEIALNINDYTDLHK-VPEADIWVVSADHPFN-LINWVNKYCVRANQPYINAG 241 (353)
T ss_dssp EEEECCCCSGGGGGG-SCCCSEEEECCCCSTT-HHHHHHHHHHHTTCCEEEEE
T ss_pred EEeecccCchhhhhH-hccCCEEEEecCChHH-HHHHHHHHHHHhCCCEEEEE
Confidence 455666766554666 8899999999864431 12455689999999998653
|
| >3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00045 Score=67.17 Aligned_cols=148 Identities=14% Similarity=0.062 Sum_probs=88.0
Q ss_pred CCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 39 NARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
+.+|.|+| +|.+|+. .+..++...++++++ ++++++++.+. ..... .+... .| ++++++ ++|+|+.
T Consensus 2 ~~rvgiiG-~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~-~~~~~----~~---~~~ll~~~~~D~V~i 71 (345)
T 3f4l_A 2 VINCAFIG-FGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ-APIYS-HIHFT----SD---LDEVLNDPDVKLVVV 71 (345)
T ss_dssp CEEEEEEC-CSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGG-SGGGT-TCEEE----SC---THHHHTCTTEEEEEE
T ss_pred ceEEEEEe-cCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHH-HHhcC-CCceE----CC---HHHHhcCCCCCEEEE
Confidence 57899999 5999985 555354445688887 67888877632 22222 22221 33 344555 5999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
|..+... ..++..|+++|.|.+.----..-......+.+.++++|+.+.++.-.-+-..-..+..+++. -...+
T Consensus 72 ~tp~~~h---~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~---g~iG~ 145 (345)
T 3f4l_A 72 CTHADSH---FEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIES---GKLGE 145 (345)
T ss_dssp CSCGGGH---HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHH---STTCS
T ss_pred cCChHHH---HHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHHhc---CCCCC
Confidence 9865432 68889999999887632111111234445667788889888766433232222233444432 23456
Q ss_pred CeEEEEEe
Q 014177 195 PERLRFSY 202 (429)
Q Consensus 195 v~~i~~~~ 202 (429)
+..++..+
T Consensus 146 i~~~~~~~ 153 (345)
T 3f4l_A 146 IVEVESHF 153 (345)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEe
Confidence 77777643
|
| >3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0011 Score=65.72 Aligned_cols=152 Identities=17% Similarity=0.150 Sum_probs=96.4
Q ss_pred CCCCeEEEEcCChH---HHHHHHHHHhHcCCCceEE--EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh----c
Q 014177 37 NRNARVLVLGGTGR---VGGSTAVALSKLCPDLQIV--VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL----R 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~---iG~~l~~~L~~~~~g~~v~--v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~----~ 107 (429)
|++.+|.|+| +|. +|+.-+..+... ++++++ ++|++++++++++++++-.... =..|.+++-+.- .
T Consensus 10 m~~~rvgiiG-~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~g~~~~~---~~~~~~~ll~~~~~~~~ 84 (398)
T 3dty_A 10 PQPIRWAMVG-GGSQSQIGYIHRCAALRD-NTFVLVAGAFDIDPIRGSAFGEQLGVDSER---CYADYLSMFEQEARRAD 84 (398)
T ss_dssp CSCEEEEEEE-CCTTCSSHHHHHHHHHGG-GSEEEEEEECCSSHHHHHHHHHHTTCCGGG---BCSSHHHHHHHHTTCTT
T ss_pred cCcceEEEEc-CCccchhHHHHHHHHhhC-CCeEEEEEEeCCCHHHHHHHHHHhCCCcce---eeCCHHHHHhcccccCC
Confidence 5668999999 576 999888887764 467876 4689999999988876521000 123444433221 2
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
++|+|+.|..+... ..++.+|+++|.|.+- ++.+ ......+.+.++++|+.+.++.-.-+-..-..++.++
T Consensus 85 ~vD~V~i~tp~~~H---~~~~~~al~aGkhVl~EKPla~~---~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 158 (398)
T 3dty_A 85 GIQAVSIATPNGTH---YSITKAALEAGLHVVCEKPLCFT---VEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMI 158 (398)
T ss_dssp CCSEEEEESCGGGH---HHHHHHHHHTTCEEEECSCSCSC---HHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHH
T ss_pred CCCEEEECCCcHHH---HHHHHHHHHCCCeEEEeCCCcCC---HHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHH
Confidence 59999988765433 6889999999988763 1222 2244466677888998887764433333333344444
Q ss_pred HHHHhhcCCCCeEEEEEe
Q 014177 185 RVARNESKGEPERLRFSY 202 (429)
Q Consensus 185 ~~~~~~~~~~v~~i~~~~ 202 (429)
+ +-...++..++..|
T Consensus 159 ~---~G~iG~i~~v~~~~ 173 (398)
T 3dty_A 159 A---AGELGDVRMVHMQF 173 (398)
T ss_dssp H---TTTTCSEEEEEEEE
T ss_pred h---cCCCCCeEEEEEEE
Confidence 3 23456777777654
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.55 E-value=7.8e-05 Score=73.04 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=61.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++|.|+||+|++|+.+++.|.++ +|..++.....+....+.+. +. ..+...-++.. + .++++|+||-|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~--~~-~~~~~~~~~~~-~----~~~~~Dvvf~a~~ 73 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK--FK-DQDITIEETTE-T----AFEGVDIALFSAG 73 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE--ET-TEEEEEEECCT-T----TTTTCSEEEECSC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce--ec-CCCceEeeCCH-H----HhcCCCEEEECCC
Confidence 468999999999999999988874 24456665542222111110 11 11222233322 1 2468999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.+.. ...+..+.+.|+..||++++.
T Consensus 74 ~~~s---~~~a~~~~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 74 SSTS---AKYAPYAVKAGVVVVDNTSYF 98 (366)
T ss_dssp HHHH---HHHHHHHHHTTCEEEECSSTT
T ss_pred hHhH---HHHHHHHHHCCCEEEEcCCcc
Confidence 5432 567778889999999999753
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00043 Score=68.98 Aligned_cols=97 Identities=24% Similarity=0.342 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.+++|+|+|+ |.+|+.+++.|... |. +|++++|+.++++++++.++. +. .+ .+++.+.+.++|+||+|
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~~g~--~~--~~---~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGG--EA--VR---FDELVDHLARSDVVVSA 234 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTC--EE--CC---GGGHHHHHHTCSEEEEC
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCC--ce--ec---HHhHHHHhcCCCEEEEc
Confidence 57899999996 88999999999987 77 899999999988777777652 21 22 23466777899999999
Q ss_pred CCCCCCCchHHHHHH-HHH----cCCcEEEeCC
Q 014177 116 AGPFQQAPKCTVLEA-AIE----TKTAYIDVCD 143 (429)
Q Consensus 116 agp~~~~~~~~v~~a-a~~----~gv~~vdis~ 143 (429)
.+.....-+...++. +++ .+.-.+|++.
T Consensus 235 t~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 235 TAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp CSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred cCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 864332111244554 433 2233466653
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00024 Score=64.39 Aligned_cols=92 Identities=23% Similarity=0.336 Sum_probs=61.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++++|.|+| +|.+|+.+++.|.+. +++|++.+|+.++.+.+.+. .+... ++.+.++++|+||.|..
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~---g~~~~--------~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPS---AAQVT--------FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBT---TSEEE--------EHHHHTTSCSEEEECSC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc---CCcee--------cHHHHHhCCCEEEECCC
Confidence 457899999 799999999999986 78999999998887765432 23321 24556789999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.....-.. +.... .+...+|++...
T Consensus 93 ~~~~~~v~~-l~~~~-~~~~vv~~s~g~ 118 (215)
T 2vns_A 93 REHYSSLCS-LSDQL-AGKILVDVSNPT 118 (215)
T ss_dssp GGGSGGGGG-GHHHH-TTCEEEECCCCC
T ss_pred hHHHHHHHH-HHHhc-CCCEEEEeCCCc
Confidence 643211111 12222 455666766543
|
| >3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0018 Score=62.59 Aligned_cols=123 Identities=16% Similarity=0.152 Sum_probs=81.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeCCCh-----------HHHHHH
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNIYNE-----------GSLLMA 105 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~-----------~~l~~~ 105 (429)
+++|.|+|+||.||...++-+.+. +.++|+. +++|.+++.+...++++++ +...|-.+. +.+.++
T Consensus 3 ~k~i~ILGsTGSIG~~tldVi~~~-~~~~vvaL~a~~n~~~l~~q~~~f~p~~-v~v~~~~~~~~~l~~~~~G~~~l~el 80 (376)
T 3a06_A 3 ERTLVILGATGSIGTQTLDVLKKV-KGIRLIGISFHSNLELAFKIVKEFNVKN-VAITGDVEFEDSSINVWKGSHSIEEM 80 (376)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHS-CSEEEEEEEESSCHHHHHHHHHHHTCCE-EEECSSCCCCCSSSEEEESTTHHHHH
T ss_pred cceEEEECCCCHHHHHHHHHHHhC-CCeEEEEEEccCCHHHHHHHHHHcCCCE-EEEccHHHHHHHHHHHccCHHHHHHH
Confidence 378999999999999999888875 5677764 5789999998888876532 223343332 344555
Q ss_pred hc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 106 LR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 106 ~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
+. ++|+|+++.-- ..| ..-.-+|+++|.+.. ++.-......-..+.+.++++|..++|
T Consensus 81 ~~~~~~D~Vv~AivG--~aG-L~ptlaAi~aGK~va-LANKEsLV~aG~li~~~a~~~g~~llP 140 (376)
T 3a06_A 81 LEALKPDITMVAVSG--FSG-LRAVLASLEHSKRVC-LANKESLVCGGFLVKKKLKEKGTELIP 140 (376)
T ss_dssp HHHHCCSEEEECCCS--TTH-HHHHHHHHHHCSEEE-ECCSHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred hcCCCCCEEEEEeeC--HHH-HHHHHHHHHCCCEEE-EeChHHHHhhHHHHHHHHHHcCCEEEE
Confidence 54 79999998632 223 455567788885554 543433333333455667778887654
|
| >3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00055 Score=67.01 Aligned_cols=144 Identities=10% Similarity=0.090 Sum_probs=89.1
Q ss_pred CCCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
|++.+|.|+| +|.+|+. .+..|.+ .++++|+ +++++++++. +.++ .+... .| ++++++ ++|+|
T Consensus 3 ~~~~rvgiiG-~G~~g~~~~~~~l~~-~~~~~l~av~d~~~~~~~---~~~~-~~~~~----~~---~~~ll~~~~vD~V 69 (362)
T 3fhl_A 3 LEIIKTGLAA-FGMSGQVFHAPFIST-NPHFELYKIVERSKELSK---ERYP-QASIV----RS---FKELTEDPEIDLI 69 (362)
T ss_dssp CCCEEEEESC-CSHHHHHTTHHHHHH-CTTEEEEEEECSSCCGGG---TTCT-TSEEE----SC---SHHHHTCTTCCEE
T ss_pred CCceEEEEEC-CCHHHHHHHHHHHhh-CCCeEEEEEEcCCHHHHH---HhCC-CCceE----CC---HHHHhcCCCCCEE
Confidence 5567999999 5889997 6777766 4678876 5688877632 2221 22221 33 344555 59999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
+.|..+... ..++..|+++|.|.+- ++.+. .....+.+.++++|+.+.++.-.-+...-..+..+++ +
T Consensus 70 ~i~tp~~~H---~~~~~~al~aGkhVl~EKP~a~~~---~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~---~ 140 (362)
T 3fhl_A 70 VVNTPDNTH---YEYAGMALEAGKNVVVEKPFTSTT---KQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILA---K 140 (362)
T ss_dssp EECSCGGGH---HHHHHHHHHTTCEEEEESSCCSSH---HHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHH---T
T ss_pred EEeCChHHH---HHHHHHHHHCCCeEEEecCCCCCH---HHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHH---c
Confidence 999765433 6889999999988763 22222 3444666778888988876644323332223344443 2
Q ss_pred hcCCCCeEEEEEe
Q 014177 190 ESKGEPERLRFSY 202 (429)
Q Consensus 190 ~~~~~v~~i~~~~ 202 (429)
-...++..++..+
T Consensus 141 G~iG~i~~v~~~~ 153 (362)
T 3fhl_A 141 SLLGRLVEYESTF 153 (362)
T ss_dssp TTTSSEEEEEEEE
T ss_pred CCCCCeEEEEEEe
Confidence 2355677777644
|
| >3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00042 Score=69.81 Aligned_cols=151 Identities=18% Similarity=0.106 Sum_probs=93.9
Q ss_pred CCCeEEEEcC---ChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhc--Ccc
Q 014177 38 RNARVLVLGG---TGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga---~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~--~~D 110 (429)
++.+|.|+|+ +|.+|+..++.|.+..++++|+ ++++++++++++++.++. .+.. ..| ++++++ ++|
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~----~~~---~~~ll~~~~vD 91 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATA----FPT---LESFASSSTID 91 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEE----ESS---HHHHHHCSSCS
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCccee----eCC---HHHHhcCCCCC
Confidence 4578999997 4999999999998732578764 678999998888877642 1111 123 445554 699
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcC------CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETK------TAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~g------v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
+|+.|..+... ..++.+|+++| .|.+-=---..-......+.+.++++|+.+.++.-.-+-..-..+..++
T Consensus 92 ~V~i~tp~~~H---~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 168 (438)
T 3btv_A 92 MIVIAIQVASH---YEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELI 168 (438)
T ss_dssp EEEECSCHHHH---HHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHHHHHH
T ss_pred EEEEeCCcHHH---HHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHHHHHH
Confidence 99999865432 57888899999 6654211001112344566677888888776663322222222233343
Q ss_pred HHHHhhcCCCCeEEEEE
Q 014177 185 RVARNESKGEPERLRFS 201 (429)
Q Consensus 185 ~~~~~~~~~~v~~i~~~ 201 (429)
+ +-...++..++..
T Consensus 169 ~---~G~iG~i~~v~~~ 182 (438)
T 3btv_A 169 S---QGYIGDINSIEIA 182 (438)
T ss_dssp H---TTTTCSEEEEEEE
T ss_pred H---cCCCCCcEEEEEE
Confidence 3 2345567777764
|
| >3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00061 Score=68.25 Aligned_cols=135 Identities=15% Similarity=0.152 Sum_probs=90.1
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHh-C--CCcEE---------------EEe
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTL-G--KNSEF---------------AEV 94 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l-~--~~v~~---------------~~~ 94 (429)
.+..++.||.|+|+ |.+|+..++.+.+ .++.+++ ++||++++++...+++ + ..+.. ...
T Consensus 18 ~~~~k~IRVGIIGa-G~iG~~~~~~l~~-~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v 95 (446)
T 3upl_A 18 AETGKPIRIGLIGA-GEMGTDIVTQVAR-MQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAV 95 (446)
T ss_dssp HHTTCCEEEEEECC-SHHHHHHHHHHTT-SSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEE
T ss_pred HhcCCceEEEEECC-hHHHHHHHHHHhh-CCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceE
Confidence 33456679999995 9999999999877 4677764 5689999988876654 3 11100 011
Q ss_pred eCCChHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCc
Q 014177 95 NIYNEGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIY 172 (429)
Q Consensus 95 Dl~d~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~ 172 (429)
.+| .+++++ ++|+|+.+.+.... ...++..|+++|.|.+-.+- ..-......+.+.++++|+.+..+.|-.
T Consensus 96 -~~D---~eeLL~d~dIDaVviaTp~p~~--H~e~a~~AL~AGKHVv~~nk-~l~~~eg~eL~~~A~e~Gvvl~~~~gdq 168 (446)
T 3upl_A 96 -TDD---NDLILSNPLIDVIIDATGIPEV--GAETGIAAIRNGKHLVMMNV-EADVTIGPYLKAQADKQGVIYSLGAGDE 168 (446)
T ss_dssp -ESC---HHHHHTCTTCCEEEECSCCHHH--HHHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHHHTCCEEECTTSH
T ss_pred -ECC---HHHHhcCCCCCEEEEcCCChHH--HHHHHHHHHHcCCcEEecCc-ccCHHHHHHHHHHHHHhCCeeeecCCcc
Confidence 133 445565 69999999864211 15788999999999885432 1112233467788899999988877666
Q ss_pred cchhH
Q 014177 173 PGVSN 177 (429)
Q Consensus 173 pG~s~ 177 (429)
|+...
T Consensus 169 p~~~~ 173 (446)
T 3upl_A 169 PSSCM 173 (446)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 66533
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0003 Score=66.14 Aligned_cols=126 Identities=20% Similarity=0.272 Sum_probs=83.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
..++++|+|+ |..|+.++..|.+. |. +|++++|+.++++++++.++. .+. + + +. ..++|+|||+.
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~--G~~~i~v~nRt~~ka~~la~~~~~--~~~--~--~---~~--~~~~DivInaT 183 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALYGY--AYI--N--S---LE--NQQADILVNVT 183 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHHTC--EEE--S--C---CT--TCCCSEEEECS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCC--ccc--h--h---hh--cccCCEEEECC
Confidence 3578999995 66999999999987 65 899999999999999887742 111 1 1 11 35799999998
Q ss_pred CCCCC----CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 117 GPFQQ----APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 117 gp~~~----~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
..... ....++-..++..+...+|+...+.. ..+...+++.|...+.|. .++..+.+..+.
T Consensus 184 p~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~----T~ll~~A~~~G~~~i~Gl-------~MLv~Qa~~~f~ 248 (271)
T 1npy_A 184 SIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE----TPFIRYAQARGKQTISGA-------AVIVLQAVEQFE 248 (271)
T ss_dssp STTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSS----CHHHHHHHHTTCEEECHH-------HHHHHHHHHHHH
T ss_pred CCCccCccccCCCCCCHHHcCCCCEEEEeecCCCC----CHHHHHHHHCCCEEECCH-------HHHHHHHHHHHH
Confidence 53221 00012223456667778899865432 245567788887765442 356666665543
|
| >3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0023 Score=62.26 Aligned_cols=147 Identities=10% Similarity=0.052 Sum_probs=88.7
Q ss_pred CCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 39 NARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
+.+|.|+| +|.+|+ ..+..|.+ .++++|+ +++++ +.+++++.++ ..+... .| ++++++ ++|+|+
T Consensus 2 ~~rvgiiG-~G~~g~~~~~~~l~~-~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~----~~---~~~ll~~~~~D~V~ 70 (349)
T 3i23_A 2 TVKMGFIG-FGKSANRYHLPYVMI-RETLEVKTIFDLH--VNEKAAAPFKEKGVNFT----AD---LNELLTDPEIELIT 70 (349)
T ss_dssp CEEEEEEC-CSHHHHHTTHHHHTT-CTTEEEEEEECTT--CCHHHHHHHHTTTCEEE----SC---THHHHSCTTCCEEE
T ss_pred eeEEEEEc-cCHHHHHHHHHHHhh-CCCeEEEEEECCC--HHHHHHHhhCCCCCeEE----CC---HHHHhcCCCCCEEE
Confidence 56999999 588998 56666666 4688876 56776 5556655432 122221 23 344555 599999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+.++.-.-+...-..+..+++. -...
T Consensus 71 i~tp~~~h---~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~---g~iG 144 (349)
T 3i23_A 71 ICTPAHTH---YDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQ---GFLG 144 (349)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHH---TTTC
T ss_pred EeCCcHHH---HHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhc---CCCC
Confidence 99865433 68889999999887631100111234446667788899888776443233322333444432 3456
Q ss_pred CCeEEEEEe
Q 014177 194 EPERLRFSY 202 (429)
Q Consensus 194 ~v~~i~~~~ 202 (429)
++..++..+
T Consensus 145 ~i~~~~~~~ 153 (349)
T 3i23_A 145 EINEVETHI 153 (349)
T ss_dssp SEEEEEEEC
T ss_pred CEEEEEEEe
Confidence 777777643
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00034 Score=72.30 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=72.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHH---hCCCcEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVST---LGKNSEFA 92 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~---l~~~v~~~ 92 (429)
+.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|.+. .|++.+++. +.+.+++.
T Consensus 322 ekL~~arVLIVGa-GGLGs~vA~~La~aGVG-~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~ 399 (615)
T 4gsl_A 322 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDAT 399 (615)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEE
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEE
Confidence 3567899999996 66999999999997433 899998764 344444333 33445544
Q ss_pred Eee--C--------------CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 93 EVN--I--------------YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 93 ~~D--l--------------~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
..+ + .+.+.+.++++++|+||+|...+... ..+-++|.+.+++.|+.
T Consensus 400 ~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR--~~ln~~c~~~~~PlI~a 462 (615)
T 4gsl_A 400 GVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESR--WLPSLLSNIENKTVINA 462 (615)
T ss_dssp EECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGT--HHHHHHHHHTTCEEEEE
T ss_pred EeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHH--HHHHHHHHHcCCeEEEE
Confidence 433 2 12345667788999999998765432 57788999999998864
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00021 Score=69.96 Aligned_cols=114 Identities=17% Similarity=0.087 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+++++|.|+| .|.+|+.+++.|.+. |++|++.+|++++.+.+.+. .+. ...+.+++.+..+.+|+||.|.
T Consensus 20 m~~mkIgiIG-lG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~---g~~----~~~s~~e~~~~a~~~DvVi~~v 89 (358)
T 4e21_A 20 FQSMQIGMIG-LGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE---GIA----GARSIEEFCAKLVKPRVVWLMV 89 (358)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT---TCB----CCSSHHHHHHHSCSSCEEEECS
T ss_pred hcCCEEEEEC-chHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC---CCE----EeCCHHHHHhcCCCCCEEEEeC
Confidence 4568999999 699999999999997 79999999999988877642 221 1234333333333459999998
Q ss_pred CCCCCCchHHHHHHHHH---cCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 117 GPFQQAPKCTVLEAAIE---TKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~---~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
.+.. ...+++.... .+.-.||.++... .....+.+..++.|+..
T Consensus 90 p~~~---v~~vl~~l~~~l~~g~iiId~st~~~--~~~~~~~~~l~~~g~~~ 136 (358)
T 4e21_A 90 PAAV---VDSMLQRMTPLLAANDIVIDGGNSHY--QDDIRRADQMRAQGITY 136 (358)
T ss_dssp CGGG---HHHHHHHHGGGCCTTCEEEECSSCCH--HHHHHHHHHHHTTTCEE
T ss_pred CHHH---HHHHHHHHHhhCCCCCEEEeCCCCCh--HHHHHHHHHHHHCCCEE
Confidence 6542 2445544332 3555677765432 12223334445556544
|
| >2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.001 Score=67.69 Aligned_cols=153 Identities=18% Similarity=0.134 Sum_probs=95.3
Q ss_pred CCCCeEEEEcCC---hHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhc--Cc
Q 014177 37 NRNARVLVLGGT---GRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALR--DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~---G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~--~~ 109 (429)
|++.+|.|+|++ |.+|...++.|.+..++++|+ ++++++++++++++.++. .+.. ..| ++++++ ++
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~----~~d---~~ell~~~~v 109 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATG----FDS---LESFAQYKDI 109 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEE----ESC---HHHHHHCTTC
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCccee----eCC---HHHHhcCCCC
Confidence 456799999973 999999999998732578765 678999999888887642 1111 133 445554 79
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcC------CcEEEeCCChhHHHHHHhhHHHHHHcC-CcEEecCCCccchhHHHHHH
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETK------TAYIDVCDDTIYSQRAKSFKDRAIAAN-IPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~g------v~~vdis~~~~~~~~~~~~~~~a~~~g-~~~i~~~g~~pG~s~~~a~~ 182 (429)
|+|+.|..+... ..++.+|+++| .|.+-=---..-......+.+.++++| +.+.++.-.-+-..-..+..
T Consensus 110 D~V~I~tp~~~H---~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~ 186 (479)
T 2nvw_A 110 DMIVVSVKVPEH---YEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQGRKSPYIVRAKE 186 (479)
T ss_dssp SEEEECSCHHHH---HHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGGGCHHHHHHHH
T ss_pred CEEEEcCCcHHH---HHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEeccccCHHHHHHHH
Confidence 999999865432 67888999999 655421100111234456667788888 77766643333322222334
Q ss_pred HHHHHHhhcCCCCeEEEEEe
Q 014177 183 LVRVARNESKGEPERLRFSY 202 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~ 202 (429)
+++ +-...++..++..+
T Consensus 187 ~i~---~G~iG~i~~v~~~~ 203 (479)
T 2nvw_A 187 LIS---EGCIGDINSIEISG 203 (479)
T ss_dssp HHH---TTTTCSEEEEEEEE
T ss_pred HHH---cCCCCCeEEEEEEe
Confidence 433 22345677777643
|
| >1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00048 Score=66.74 Aligned_cols=102 Identities=15% Similarity=0.117 Sum_probs=67.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-c--CchhHHHHHH------HhCCCcE-----E------E-EeeC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-R--NREKGAAMVS------TLGKNSE-----F------A-EVNI 96 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R--~~~~~~~l~~------~l~~~v~-----~------~-~~Dl 96 (429)
|+.||.|.|. |+||+.+++.|.++ ++.+|+.+. + +.+++..+.+ .+...++ . + ....
T Consensus 2 M~ikVgI~G~-G~iGr~~~R~l~~~-~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1u8f_O 2 GKVKVGVNGF-GRIGRLVTRAAFNS-GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQE 79 (335)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHH-CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CceEEEEEcc-CHHHHHHHHHHHcC-CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEec
Confidence 4569999995 99999999999885 688877654 3 4555554443 1111111 0 1 1222
Q ss_pred CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
.|++.+.-...++|+||-|+|.+.. ...+..+++.|++.||++..
T Consensus 80 ~d~~~l~~~~~~vDvV~eatg~~~~---~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 80 RDPSKIKWGDAGAEYVVESTGVFTT---MEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp SSGGGCCTTTTTCCEEEECSSSCCS---HHHHGGGGGGTCSEEEESSC
T ss_pred CCHHHCccccCCCCEEEECCCchhh---HHHHHHHHhCCCeEEEeccC
Confidence 3444331001479999999987765 67788889999999999864
|
| >3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0043 Score=59.34 Aligned_cols=147 Identities=12% Similarity=0.091 Sum_probs=92.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-------cCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL-------RDV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~-------~~~ 109 (429)
.|++|.|+|++|++|...++.|.+. +.++ .++|+++++. ...+..+ .... ..|.+++.+.+ .++
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~~~-~~~~----~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV--GGVLVASLDPATNVG-LVDSFFP-EAEF----FTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGTCT-TCEE----ESCHHHHHHHHHHHHHTTCCC
T ss_pred CceEEEEECCChHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhhCC-CCce----eCCHHHHHHHhhhhcccCCCC
Confidence 3689999998789999999999885 5555 4567887763 2222221 2222 23445444322 479
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
|+|+.|..+... ..++.+|+++|.|.+- ++.+ ......+.+.++++|+.+..+.-.-+...-..+..+++
T Consensus 74 D~V~I~tP~~~H---~~~~~~al~aGkhVl~EKPla~~---~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~- 146 (312)
T 3o9z_A 74 DYLSIASPNHLH---YPQIRMALRLGANALSEKPLVLW---PEEIARLKELEARTGRRVYTVLQLRVHPSLLALKERLG- 146 (312)
T ss_dssp SEEEECSCGGGH---HHHHHHHHHTTCEEEECSSSCSC---HHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHH-
T ss_pred cEEEECCCchhh---HHHHHHHHHCCCeEEEECCCCCC---HHHHHHHHHHHHHcCCEEEEEeehhcCHHHHHHHHHHH-
Confidence 999999866543 7889999999988762 1212 23445666778888988877644434443334444543
Q ss_pred HHhhcCCCCeEEEEEee
Q 014177 187 ARNESKGEPERLRFSYY 203 (429)
Q Consensus 187 ~~~~~~~~v~~i~~~~~ 203 (429)
+ +.++..++..+.
T Consensus 147 ---~-gG~i~~v~~~~~ 159 (312)
T 3o9z_A 147 ---Q-EKGAKDVVLTYV 159 (312)
T ss_dssp ---T-CCSCEEEEEEEE
T ss_pred ---c-CCCEEEEEEEEE
Confidence 2 367777776554
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0003 Score=66.57 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=51.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|+|.|+| +|.+|+.+++.|.+. |++|++.+|++++.+.+.+. ++.. . .++.++++++|+||.|..
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~---g~~~----~---~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAAL---GAER----A---ATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT---TCEE----C---SSHHHHHHHCSEEEECCS
T ss_pred CEEEEEe-ecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC---CCee----c---CCHHHHHhcCCEEEEEcC
Confidence 6899999 699999999999997 79999999999998887653 2221 1 235566778999999875
|
| >3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00078 Score=65.95 Aligned_cols=151 Identities=13% Similarity=0.051 Sum_probs=88.4
Q ss_pred cCCCCCCCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--C
Q 014177 33 FQMKNRNARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--D 108 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~ 108 (429)
++..|++.+|.|+| +|.+|. ..+..|.. ++++++ ++|+++++++++++.++. ... ..| ++++++ +
T Consensus 20 ~~~Mm~~irvgiiG-~G~~~~~~~~~~~~~--~~~~lvav~d~~~~~a~~~a~~~~~-~~~----~~~---~~~ll~~~~ 88 (361)
T 3u3x_A 20 FQSMMDELRFAAVG-LNHNHIYGQVNCLLR--AGARLAGFHEKDDALAAEFSAVYAD-ARR----IAT---AEEILEDEN 88 (361)
T ss_dssp ------CCEEEEEC-CCSTTHHHHHHHHHH--TTCEEEEEECSCHHHHHHHHHHSSS-CCE----ESC---HHHHHTCTT
T ss_pred hhhhccCcEEEEEC-cCHHHHHHHHHHhhc--CCcEEEEEEcCCHHHHHHHHHHcCC-Ccc----cCC---HHHHhcCCC
Confidence 33335567999999 577885 45666654 478765 678999999998887741 111 133 445565 5
Q ss_pred ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccc-hhHHHHHHHHHHH
Q 014177 109 VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPG-VSNVMAAELVRVA 187 (429)
Q Consensus 109 ~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG-~s~~~a~~~~~~~ 187 (429)
+|+|+.|..+... ..++.+|+++|.|.+-=---..-......+.+.++++|+.+.++.-.-+. ..-..+..+++
T Consensus 89 vD~V~I~tp~~~H---~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p~~~~~k~~i~-- 163 (361)
T 3u3x_A 89 IGLIVSAAVSSER---AELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESPATVKAGELVA-- 163 (361)
T ss_dssp CCEEEECCCHHHH---HHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCHHHHHHHHHHH--
T ss_pred CCEEEEeCChHHH---HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCHHHHHHHHHHH--
Confidence 9999988754432 67889999999887631110111234446667788889887766432221 22222333332
Q ss_pred HhhcCCCCeEEEE
Q 014177 188 RNESKGEPERLRF 200 (429)
Q Consensus 188 ~~~~~~~v~~i~~ 200 (429)
+-...++..++.
T Consensus 164 -~g~iG~i~~~~~ 175 (361)
T 3u3x_A 164 -AGAIGEVVHIVG 175 (361)
T ss_dssp -TTTTSSEEEEEE
T ss_pred -cCCCCCeEEEEE
Confidence 223456666665
|
| >2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.002 Score=62.25 Aligned_cols=147 Identities=12% Similarity=0.096 Sum_probs=89.2
Q ss_pred CCCCeEEEEcCChHHHH-HHHHHHhHcCCCceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGG-STAVALSKLCPDLQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
|++.+|.|+| +|.+|. ..+..|.. +++++ .++|+++++++++++.++. +.. ..| ++++++ ++|+|
T Consensus 2 M~~~rvgiiG-~G~~~~~~~~~~l~~--~~~~lvav~d~~~~~~~~~a~~~~~-~~~----~~~---~~~ll~~~~~D~V 70 (336)
T 2p2s_A 2 MKKIRFAAIG-LAHNHIYDMCQQLID--AGAELAGVFESDSDNRAKFTSLFPS-VPF----AAS---AEQLITDASIDLI 70 (336)
T ss_dssp --CCEEEEEC-CSSTHHHHHHHHHHH--TTCEEEEEECSCTTSCHHHHHHSTT-CCB----CSC---HHHHHTCTTCCEE
T ss_pred CCccEEEEEC-CChHHHHHhhhhhcC--CCcEEEEEeCCCHHHHHHHHHhcCC-Ccc----cCC---HHHHhhCCCCCEE
Confidence 5568999999 477885 56677754 37886 5789999999988887631 111 233 455565 69999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchh-HHHHHHHHHHHHhhc
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVS-NVMAAELVRVARNES 191 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s-~~~a~~~~~~~~~~~ 191 (429)
+-|..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+..+.-.-+-.. -..+..+++ +-.
T Consensus 71 ~i~tp~~~h---~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~---~g~ 144 (336)
T 2p2s_A 71 ACAVIPCDR---AELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQ---RGE 144 (336)
T ss_dssp EECSCGGGH---HHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHH---TTT
T ss_pred EEeCChhhH---HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHh---CCC
Confidence 998765433 6788899999988652110011123444666778888988776643322211 122333332 223
Q ss_pred CCCCeEEEE
Q 014177 192 KGEPERLRF 200 (429)
Q Consensus 192 ~~~v~~i~~ 200 (429)
..++..++.
T Consensus 145 iG~i~~v~~ 153 (336)
T 2p2s_A 145 IGRVIQTMG 153 (336)
T ss_dssp TSSEEEEEE
T ss_pred CCceEEEEE
Confidence 456666665
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.45 E-value=6e-05 Score=73.26 Aligned_cols=93 Identities=19% Similarity=0.207 Sum_probs=62.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC-CCceEEEEec--CchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC-PDLQIVVGSR--NREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v~~R--~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+++|.|+||+|++|+.+++.|.++. +..+++.+.. +..+. + .+. ..+....|. |.+ .++++|+||-|
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~--~--~~~-~~~i~~~~~-~~~----~~~~vDvVf~a 72 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT--Y--RFN-GKTVRVQNV-EEF----DWSQVHIALFS 72 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE--E--EET-TEEEEEEEG-GGC----CGGGCSEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc--e--eec-CceeEEecC-ChH----HhcCCCEEEEC
Confidence 5789999999999999999998852 5677776652 22110 0 011 112222222 111 34689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+|.+.. ...+..+++.|+..||.++.
T Consensus 73 ~g~~~s---~~~a~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 73 AGGELS---AKWAPIAAEAGVVVIDNTSH 98 (336)
T ss_dssp SCHHHH---HHHHHHHHHTTCEEEECSST
T ss_pred CCchHH---HHHHHHHHHcCCEEEEcCCc
Confidence 875532 67788889999999999876
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00035 Score=67.92 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=55.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~DvV 112 (429)
.+++|+|+|++|.+|..+++.+... |++|++.+|+.++++.+ ++++. . ..+|+.+.+++.+.+. ++|+|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~-~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~D~v 242 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELF-RSIGG--E-VFIDFTKEKDIVGAVLKATDGGAHGV 242 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHH-HHTTC--C-EEEETTTCSCHHHHHHHHHTSCEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHH-HHcCC--c-eEEecCccHhHHHHHHHHhCCCCCEE
Confidence 4579999999999999999999886 78999999998887544 34442 2 3358774333333332 69999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|+++|.
T Consensus 243 i~~~g~ 248 (347)
T 2hcy_A 243 INVSVS 248 (347)
T ss_dssp EECSSC
T ss_pred EECCCc
Confidence 999873
|
| >1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=8.9e-05 Score=68.60 Aligned_cols=129 Identities=13% Similarity=0.176 Sum_probs=83.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
..|||.++| +|.||+.+++. . +++++.+-. +|..+ + .+ ...-| +++++.++|+|+.||+
T Consensus 11 ~~~rV~i~G-~GaIG~~v~~~---~--~leLv~v~~--~k~ge----l--gv-~a~~d------~d~lla~pD~VVe~A~ 69 (253)
T 1j5p_A 11 HHMTVLIIG-MGNIGKKLVEL---G--NFEKIYAYD--RISKD----I--PG-VVRLD------EFQVPSDVSTVVECAS 69 (253)
T ss_dssp CCCEEEEEC-CSHHHHHHHHH---S--CCSEEEEEC--SSCCC----C--SS-SEECS------SCCCCTTCCEEEECSC
T ss_pred ccceEEEEC-cCHHHHHHHhc---C--CcEEEEEEe--ccccc----c--Cc-eeeCC------HHHHhhCCCEEEECCC
Confidence 358999999 89999999998 2 567655432 33221 1 11 11222 3344568999999997
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHhhcCCCCe
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPE 196 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~ 196 (429)
+... ...+..++++|++.+-.|...- .-.....+.+.+++.|..+...+|..+|+.-+ .++ . ..++
T Consensus 70 ~~av---~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~GlD~l---~aa------~-g~l~ 136 (253)
T 1j5p_A 70 PEAV---KEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGGLDVL---SSI------K-DFVK 136 (253)
T ss_dssp HHHH---HHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCCHHHH---HHH------G-GGEE
T ss_pred HHHH---HHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccchhHH---HHh------c-CCcc
Confidence 6432 3457788999999997774321 11123466777888888988889999995433 112 1 3577
Q ss_pred EEEE
Q 014177 197 RLRF 200 (429)
Q Consensus 197 ~i~~ 200 (429)
.+++
T Consensus 137 ~V~~ 140 (253)
T 1j5p_A 137 NVRI 140 (253)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7776
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00012 Score=71.02 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=50.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCce-----EEEEecCc--hhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCcc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQ-----IVVGSRNR--EKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-----v~v~~R~~--~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
+++|+|+||+|+||+.++..|+..+.--+ +++.|++. ++++..+.++.. ...+. .++...+...+.++++|
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~daD 81 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDLD 81 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTCS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCCC
Confidence 36899999999999999999987521114 89999864 344443333321 11111 12222223456789999
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+||++||..
T Consensus 82 vVvitAg~p 90 (333)
T 5mdh_A 82 VAILVGSMP 90 (333)
T ss_dssp EEEECCSCC
T ss_pred EEEEeCCCC
Confidence 999999754
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00031 Score=68.56 Aligned_cols=74 Identities=23% Similarity=0.266 Sum_probs=56.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH---HHHHHhc-CccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG---SLLMALR-DVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~---~l~~~~~-~~DvVi~ 114 (429)
++|+|+||+|.+|..+++.+... |+ +|++.+++.++++.+.++++. . ..+|..+.+ .+.+... ++|+||+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSELGF--D-AAINYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCC--S-EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCC--c-eEEecCchHHHHHHHHhcCCCCCEEEE
Confidence 79999999999999999999886 78 999999998887777654542 2 345776643 2333332 6999999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
|+|.
T Consensus 237 ~~G~ 240 (357)
T 2zb4_A 237 NVGG 240 (357)
T ss_dssp SCCH
T ss_pred CCCH
Confidence 9983
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00033 Score=67.48 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=56.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHH---HHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL---MALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~---~~~~--~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+|+.++++.+.+ ++. + ..+|..+.+..+ +... ++|+|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~-~g~--~-~~~~~~~~~~~~~~~~~~~~~~~D~v 213 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK-AGA--W-QVINYREEDLVERLKEITGGKKVRVV 213 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH-HTC--S-EEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH-cCC--C-EEEECCCccHHHHHHHHhCCCCceEE
Confidence 3579999999999999999999887 7899999999888776654 442 2 235776654333 3332 69999
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
|+|+|
T Consensus 214 i~~~g 218 (327)
T 1qor_A 214 YDSVG 218 (327)
T ss_dssp EECSC
T ss_pred EECCc
Confidence 99998
|
| >4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0028 Score=62.10 Aligned_cols=151 Identities=19% Similarity=0.189 Sum_probs=94.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCC-------ceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPD-------LQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-------~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
|++-||.|+| +|.+|+.-++.+.+. ++ .+| .++|++++++++++++++. .... +| ++++++
T Consensus 4 M~klrvgiIG-~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~--~~~~---~d---~~~ll~~ 73 (390)
T 4h3v_A 4 MTNLGIGLIG-YAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW--STTE---TD---WRTLLER 73 (390)
T ss_dssp CCEEEEEEEC-HHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC--SEEE---SC---HHHHTTC
T ss_pred CCcCcEEEEc-CCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHcCC--Cccc---CC---HHHHhcC
Confidence 4455899999 699999877777653 22 244 4678999999999888752 2221 23 455665
Q ss_pred -CccEEEecCCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 108 -DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 108 -~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
++|+|+.|..+... ..++.+|+++|.|.+- ++.+..-......+.++++++|+.+.++.-.-+-..-..+..+
T Consensus 74 ~~iDaV~I~tP~~~H---~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~ 150 (390)
T 4h3v_A 74 DDVQLVDVCTPGDSH---AEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKL 150 (390)
T ss_dssp TTCSEEEECSCGGGH---HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHH
T ss_pred CCCCEEEEeCChHHH---HHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHH
Confidence 68999998865443 6889999999988752 2222222222223355577788888776443333333333444
Q ss_pred HHHHHhhcCCCCeEEEEEee
Q 014177 184 VRVARNESKGEPERLRFSYY 203 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~ 203 (429)
++ +-...++..++..+.
T Consensus 151 i~---~g~iG~i~~v~~~~~ 167 (390)
T 4h3v_A 151 VA---DGKIGTVRHVRAQYL 167 (390)
T ss_dssp HH---TTSSCSEEEEEEEEE
T ss_pred HH---cCCCCcceeeEEEEe
Confidence 43 234567777776543
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00081 Score=66.04 Aligned_cols=94 Identities=19% Similarity=0.176 Sum_probs=59.2
Q ss_pred CeEEEEcCChHHHHHHHH-HHhHcCC--CceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAV-ALSKLCP--DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~-~L~~~~~--g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++|.|+||+|++|+.+++ .|.+ ++ ..++..+..+ ...+.+.+ +.+. +....|..+.++ ++++|+||-|+
T Consensus 5 ~~VaIvGATG~vG~ellr~lL~~-hp~~~~~l~~~ss~-~aG~~~~~-~~~~-~~~v~~~~~~~~----~~~vDvvf~a~ 76 (377)
T 3uw3_A 5 MNVGLVGWRGMVGSVLMQRMQEE-GDFDLIEPVFFSTS-NAGGKAPS-FAKN-ETTLKDATSIDD----LKKCDVIITCQ 76 (377)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TGGGGSEEEEEESS-CTTSBCCT-TCCS-CCBCEETTCHHH----HHTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhh-CCCCceEEEEEech-hcCCCHHH-cCCC-ceEEEeCCChhH----hcCCCEEEECC
Confidence 689999999999999999 5555 44 3566554322 22111111 2111 122234444433 35899999998
Q ss_pred CCCCCCchHHHHHHHHHcCC--cEEEeCCC
Q 014177 117 GPFQQAPKCTVLEAAIETKT--AYIDVCDD 144 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv--~~vdis~~ 144 (429)
|.+.. ...+..+++.|+ ..||.+++
T Consensus 77 ~~~~s---~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 77 GGDYT---NDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp CHHHH---HHHHHHHHHTTCCSEEEECSST
T ss_pred ChHHH---HHHHHHHHHCCCCEEEEeCCcc
Confidence 75432 567778889997 57888874
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00082 Score=65.84 Aligned_cols=93 Identities=20% Similarity=0.189 Sum_probs=58.3
Q ss_pred CeEEEEcCChHHHHHHHH-HHhHcCC--CceEEEEe-cCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 40 ARVLVLGGTGRVGGSTAV-ALSKLCP--DLQIVVGS-RNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~-~L~~~~~--g~~v~v~~-R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++|.|+||+|++|+.+++ .|.+ ++ ..++..+. ++.. +.+. .+.+. +....|..+.++ ++++|+||-|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~-hp~~~~~l~~~ss~~aG--~~~~-~~~~~-~~~~~~~~~~~~----~~~~Dvvf~a 71 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEE-RDFDLIEPVFFSTSQIG--VPAP-NFGKD-AGMLHDAFDIES----LKQLDAVITC 71 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT-TGGGGSEEEEEESSSTT--SBCC-CSSSC-CCBCEETTCHHH----HTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCCCceEEEEEeccccC--cCHH-HhCCC-ceEEEecCChhH----hccCCEEEEC
Confidence 579999999999999999 6655 45 35665543 3321 1111 01111 122234444332 4689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCC--cEEEeCCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKT--AYIDVCDD 144 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv--~~vdis~~ 144 (429)
+|.+.. ...+..+.+.|+ ..||.+++
T Consensus 72 ~~~~~s---~~~~~~~~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 72 QGGSYT---EKVYPALRQAGWKGYWIDAAST 99 (370)
T ss_dssp SCHHHH---HHHHHHHHHTTCCCEEEECSST
T ss_pred CChHHH---HHHHHHHHHCCCCEEEEeCCch
Confidence 875432 567777888997 56888864
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00022 Score=69.19 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=56.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh----HHHHHHh-cCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE----GSLLMAL-RDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~----~~l~~~~-~~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+++.++++.+.++++. . ..+|..+. +.+.+.. .++|+|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~d~v 229 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKFGF--D-DAFNYKEESDLTAALKRCFPNGIDIY 229 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTSCC--S-EEEETTSCSCSHHHHHHHCTTCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCC--c-eEEecCCHHHHHHHHHHHhCCCCcEE
Confidence 4579999999999999999999886 78999999999888776645542 2 23476653 2233332 269999
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
|+|+|
T Consensus 230 i~~~g 234 (345)
T 2j3h_A 230 FENVG 234 (345)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99987
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00065 Score=64.45 Aligned_cols=111 Identities=18% Similarity=0.150 Sum_probs=72.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
++.+|.|+|++|.+|+.+++.|.+. ++++ +++-++.+... +.+ .+. + ..+++++.+ ++|+++-+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~--g~~~-V~~V~p~~~g~--~~~--G~~---v----y~sl~el~~~~~~D~viI~ 71 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY--GTKM-VGGVTPGKGGT--THL--GLP---V----FNTVREAVAATGATASVIY 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH--TCEE-EEEECTTCTTC--EET--TEE---E----ESSHHHHHHHHCCCEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeE-EEEeCCCcccc--eeC--Cee---c----cCCHHHHhhcCCCCEEEEe
Confidence 3578999999999999999999886 6773 44445542100 001 111 1 223455555 89999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEE-EeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYI-DVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~v-dis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
..+... ..+++.|.+.|++.+ .++.... ......+.+.+++.|+.++
T Consensus 72 tP~~~~---~~~~~ea~~~Gi~~iVi~t~G~~-~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 72 VPAPFC---KDSILEAIDAGIKLIITITEGIP-TLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp CCGGGH---HHHHHHHHHTTCSEEEECCCCCC-HHHHHHHHHHHHHHTCEEE
T ss_pred cCHHHH---HHHHHHHHHCCCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEE
Confidence 876543 789999999999974 4443221 1233456677788887654
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0006 Score=64.98 Aligned_cols=113 Identities=23% Similarity=0.309 Sum_probs=75.8
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
..+.+++|+|+| +|.+|+.+++.|... |.+|++.+|+.++.+.+.+ + .++.+ + .+++.++++++|+|++
T Consensus 153 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~-~--g~~~~--~---~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 153 YTIHGSQVAVLG-LGRTGMTIARTFAAL--GANVKVGARSSAHLARITE-M--GLVPF--H---TDELKEHVKDIDICIN 221 (300)
T ss_dssp SCSTTSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH-T--TCEEE--E---GGGHHHHSTTCSEEEE
T ss_pred CCCCCCEEEEEc-ccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH-C--CCeEE--c---hhhHHHHhhCCCEEEE
Confidence 357889999999 588999999999986 7899999999887665543 2 23322 2 2457788899999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
+++... .+ ...+ ...+.+...||++....-. .+ +.++..|+..+
T Consensus 222 ~~p~~~-i~-~~~~-~~mk~g~~lin~a~g~~~~----~~-~~a~~~G~~~i 265 (300)
T 2rir_A 222 TIPSMI-LN-QTVL-SSMTPKTLILDLASRPGGT----DF-KYAEKQGIKAL 265 (300)
T ss_dssp CCSSCC-BC-HHHH-TTSCTTCEEEECSSTTCSB----CH-HHHHHHTCEEE
T ss_pred CCChhh-hC-HHHH-HhCCCCCEEEEEeCCCCCc----CH-HHHHHCCCEEE
Confidence 987632 22 2233 2345677788888543211 12 34455676654
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00036 Score=67.59 Aligned_cols=89 Identities=10% Similarity=0.096 Sum_probs=70.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
.++++|+| +|.+|+.+++.|.++ ++ +++.++++++.+ +.+ ..+.++.+|.+|++.++++ ++++|.|+-+.+
T Consensus 115 ~~~viI~G-~G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~---~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 115 SRHVVICG-WSESTLECLRELRGS--EV-FVLAEDENVRKK-VLR---SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp -CEEEEES-CCHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHH---TTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred cCCEEEEC-CcHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHh---CCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 45899999 599999999999987 78 999999999887 543 3578999999999999887 789999998875
Q ss_pred CCCCCchHHHHHHHHHcCCc
Q 014177 118 PFQQAPKCTVLEAAIETKTA 137 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~ 137 (429)
.. ..+..+...+.+.+.+
T Consensus 187 ~d--~~n~~~~~~ar~~~~~ 204 (336)
T 1lnq_A 187 SD--SETIHCILGIRKIDES 204 (336)
T ss_dssp SH--HHHHHHHHHHHTTCTT
T ss_pred cc--HHHHHHHHHHHHHCCC
Confidence 32 1224555667777765
|
| >4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0034 Score=60.61 Aligned_cols=131 Identities=11% Similarity=0.042 Sum_probs=82.1
Q ss_pred CCCCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|++.||.|+| +|.+|+ ..++.|.+. ++++|+ +++++.++ .++.. ..|.+++-+...++|+|+.
T Consensus 23 M~~~rvgiiG-~G~ig~~~~~~~l~~~-~~~~lvav~d~~~~~---------~g~~~----~~~~~~ll~~~~~vD~V~i 87 (330)
T 4ew6_A 23 MSPINLAIVG-VGKIVRDQHLPSIAKN-ANFKLVATASRHGTV---------EGVNS----YTTIEAMLDAEPSIDAVSL 87 (330)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHHC-TTEEEEEEECSSCCC---------TTSEE----ESSHHHHHHHCTTCCEEEE
T ss_pred CCCceEEEEe-cCHHHHHHHHHHHHhC-CCeEEEEEEeCChhh---------cCCCc----cCCHHHHHhCCCCCCEEEE
Confidence 5667999999 589998 688888874 678765 46777653 13332 2354444332246999999
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHH
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~ 185 (429)
|..+... ..++.+|+++|.|.+-=---..-......+.+.++++|+.+..+.-.-+...-..++.+++
T Consensus 88 ~tp~~~H---~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~ 155 (330)
T 4ew6_A 88 CMPPQYR---YEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAAKAFLA 155 (330)
T ss_dssp CSCHHHH---HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHHHHHHH
T ss_pred eCCcHHH---HHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHHHHHHh
Confidence 8765433 6889999999988762110011123444666778888988877654434333334455553
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00048 Score=71.18 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=71.3
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-------------------hhHHHHHHHh---CCCcEEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-------------------EKGAAMVSTL---GKNSEFA 92 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-------------------~~~~~l~~~l---~~~v~~~ 92 (429)
+.++.++|+|+|+ |.+|+.+++.|+..+-+ +++++|.+. .|++.+++.+ .+.+++.
T Consensus 323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG-~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~ 400 (598)
T 3vh1_A 323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDAT 400 (598)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHTTTCC-EEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEE
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCC-EEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEE
Confidence 5577899999996 66999999999997432 899987541 3444444433 3445444
Q ss_pred Eee--C--------------CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 93 EVN--I--------------YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 93 ~~D--l--------------~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
..+ + .+.+.+.++++++|+||+|...+... ..+-++|.+.++..|+.
T Consensus 401 ~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR--~lin~~c~~~~~plI~a 463 (598)
T 3vh1_A 401 GVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESR--WLPSLLSNIENKTVINA 463 (598)
T ss_dssp EECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGT--HHHHHHHHHTTCEEEEE
T ss_pred EEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHH--HHHHHHHHhcCCCEEEE
Confidence 333 2 12355677888999999998655432 56778899999888863
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00031 Score=67.85 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=64.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH---HHHHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS---LLMALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~---l~~~~~--~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+|+.++++.+.+ ++. + ..+|..+.+. +.+... ++|+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~-~g~--~-~~~d~~~~~~~~~i~~~~~~~~~d~v 218 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK-LGC--H-HTINYSTQDFAEVVREITGGKGVDVV 218 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH-HTC--S-EEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-cCC--C-EEEECCCHHHHHHHHHHhCCCCCeEE
Confidence 3579999999999999999999887 7899999999888776543 442 2 2357766443 333332 69999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
|+|+|... ....-.+++.+-.++.++
T Consensus 219 i~~~g~~~----~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 219 YDSIGKDT----LQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EECSCTTT----HHHHHHTEEEEEEEEECC
T ss_pred EECCcHHH----HHHHHHhhccCCEEEEEe
Confidence 99998521 222223334444666554
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00047 Score=67.23 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=55.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH---HHHHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS---LLMALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~---l~~~~~--~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+|++++++.+ +.++. . ..+|..+.+. +.+... ++|+|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~-~~~ga--~-~~~d~~~~~~~~~~~~~~~~~~~D~v 243 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIV-LQNGA--H-EVFNHREVNYIDKIKKYVGEKGIDII 243 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH-HHTTC--S-EEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHH-HHcCC--C-EEEeCCCchHHHHHHHHcCCCCcEEE
Confidence 3579999999999999999999886 78999999998887744 44542 2 2357766443 333333 69999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|+|+|.
T Consensus 244 i~~~G~ 249 (351)
T 1yb5_A 244 IEMLAN 249 (351)
T ss_dssp EESCHH
T ss_pred EECCCh
Confidence 999973
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00042 Score=67.66 Aligned_cols=75 Identities=21% Similarity=0.219 Sum_probs=56.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH---HHHHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS---LLMALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~---l~~~~~--~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+|+.++++.+ ++++. + ..+|..+.+. +.+... ++|+|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~-~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMA-EKLGA--A-AGFNYKKEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH-HHHTC--S-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHH-HHcCC--c-EEEecCChHHHHHHHHHhcCCCceEE
Confidence 3579999999999999999999886 78999999998887766 44542 2 3457666443 333332 69999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|+|+|.
T Consensus 236 i~~~G~ 241 (354)
T 2j8z_A 236 LDCIGG 241 (354)
T ss_dssp EESSCG
T ss_pred EECCCc
Confidence 999984
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00075 Score=64.39 Aligned_cols=67 Identities=18% Similarity=0.202 Sum_probs=50.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.|++|.++| .|.+|+.+++.|++. |++|++.+|++++.+.+.+. .... .++..++.+++|+||.|..
T Consensus 2 ~M~kIgfIG-lG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~---Ga~~-------a~s~~e~~~~~dvv~~~l~ 68 (300)
T 3obb_A 2 HMKQIAFIG-LGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA---GASA-------ARSARDAVQGADVVISMLP 68 (300)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT---TCEE-------CSSHHHHHTTCSEEEECCS
T ss_pred CcCEEEEee-ehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHc---CCEE-------cCCHHHHHhcCCceeecCC
Confidence 367999999 799999999999997 89999999999999888753 1111 1234555666777776653
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00034 Score=64.96 Aligned_cols=88 Identities=17% Similarity=0.295 Sum_probs=61.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+++|.|+| +|.+|+.+++.|.+. +++|.+.+|++++.+.+.+.++ +.. ..+ ..++++++|+||.|..+
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~g--~~~----~~~---~~~~~~~~D~Vi~~v~~ 70 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLA--LPY----AMS---HQDLIDQVDLVILGIKP 70 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHT--CCB----CSS---HHHHHHTCSEEEECSCG
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHcC--CEe----eCC---HHHHHhcCCEEEEEeCc
Confidence 36899999 699999999999986 6899999999999888876553 111 223 44556789999999865
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeC
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
... ..+++.. +.+...++..
T Consensus 71 ~~~---~~v~~~l-~~~~~vv~~~ 90 (259)
T 2ahr_A 71 QLF---ETVLKPL-HFKQPIISMA 90 (259)
T ss_dssp GGH---HHHHTTS-CCCSCEEECC
T ss_pred HhH---HHHHHHh-ccCCEEEEeC
Confidence 322 3344322 2455556654
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00013 Score=71.00 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=61.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.|.+|.|+||+|++|+.+++.|.++ |..++..+..+....+.+.+..+ .+. ....+.+.+ .+++.+++|+||-|++
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~h-P~~el~~l~S~~~aG~~~~~~~p-~~~-~~l~~~~~~-~~~~~~~~Dvvf~alp 87 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYAGKKLEEIFP-STL-ENSILSEFD-PEKVSKNCDVLFTALP 87 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTTTSBHHHHCG-GGC-CCCBCBCCC-HHHHHHHCSEEEECCS
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEeCcccccCChHHhCh-hhc-cCceEEeCC-HHHhhcCCCEEEECCC
Confidence 4679999999999999999999984 88888776543333333322211 111 111122211 2233467999998876
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
.... ..++..+ .|+..||.|++
T Consensus 88 ~~~s---~~~~~~~--~g~~VIDlSsd 109 (351)
T 1vkn_A 88 AGAS---YDLVREL--KGVKIIDLGAD 109 (351)
T ss_dssp TTHH---HHHHTTC--CSCEEEESSST
T ss_pred cHHH---HHHHHHh--CCCEEEECChh
Confidence 3221 4555555 79999999975
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00034 Score=67.62 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=56.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHH---HHh-cCccEEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL---MAL-RDVDLVV 113 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~---~~~-~~~DvVi 113 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+++.++++.+.++++. . ..+|..+.+..+ +.. +++|+||
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~g~--~-~~~~~~~~~~~~~~~~~~~~~~d~vi 223 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEELGF--D-GAIDYKNEDLAAGLKRECPKGIDVFF 223 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCC--S-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCC--C-EEEECCCHHHHHHHHHhcCCCceEEE
Confidence 4579999999999999999998876 78999999999988877565642 2 235666644333 222 2699999
Q ss_pred ecCC
Q 014177 114 HAAG 117 (429)
Q Consensus 114 ~~ag 117 (429)
+|+|
T Consensus 224 ~~~g 227 (336)
T 4b7c_A 224 DNVG 227 (336)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9997
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00038 Score=65.80 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=53.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+++|.|+|++|.+|+.+++.|.+. +++|++.+|++++.+.+.+ .+ + +..+ ..+.++++|+||.|..+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~-~g--~-----~~~~---~~~~~~~aDvVi~av~~ 77 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQG-MG--I-----PLTD---GDGWIDEADVVVLALPD 77 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHH-TT--C-----CCCC---SSGGGGTCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHh-cC--C-----CcCC---HHHHhcCCCEEEEcCCc
Confidence 479999997799999999999987 7899999999988877765 22 2 2222 23456789999999865
Q ss_pred C
Q 014177 119 F 119 (429)
Q Consensus 119 ~ 119 (429)
.
T Consensus 78 ~ 78 (286)
T 3c24_A 78 N 78 (286)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00032 Score=66.80 Aligned_cols=75 Identities=13% Similarity=0.189 Sum_probs=52.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEE--------eeCCChHHHHHHhcCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAE--------VNIYNEGSLLMALRDV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~--------~Dl~d~~~l~~~~~~~ 109 (429)
+||+|.|+|+ |.+|+.++..|.+. |++|++.+|++++.+.+.+. + +.... .++.+.+++.+.++++
T Consensus 2 ~~m~i~iiG~-G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~-g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 2 NAMKIAIAGA-GAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKN-G--LIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHH-C--EEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhC-C--EEEEeCCCeeEecceeecchhhcccCCCC
Confidence 3478999994 99999999999987 78999999999888877654 1 22211 1122322233344589
Q ss_pred cEEEecCCC
Q 014177 110 DLVVHAAGP 118 (429)
Q Consensus 110 DvVi~~agp 118 (429)
|+||-|..+
T Consensus 76 d~vi~~v~~ 84 (316)
T 2ew2_A 76 DLIIALTKA 84 (316)
T ss_dssp SEEEECSCH
T ss_pred CEEEEEecc
Confidence 999998764
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00027 Score=67.94 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=52.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC---hHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN---EGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d---~~~l~~~~~~~DvVi~~a 116 (429)
|||.|+||+|++|+.++..|++.+-..+|++.|+++ .+..+.++...... .++.. .++++++++++|+||+++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~--~~l~~~~~t~d~~~a~~~aDvVvi~a 76 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETR--ATVKGYLGPEQLPDCLKGCDVVVIPA 76 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSS--CEEEEEESGGGHHHHHTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcC--ceEEEecCCCCHHHHhCCCCEEEECC
Confidence 489999998999999999998762226899999987 23333333321110 11111 134667889999999999
Q ss_pred CCCC
Q 014177 117 GPFQ 120 (429)
Q Consensus 117 gp~~ 120 (429)
|...
T Consensus 77 g~~~ 80 (314)
T 1mld_A 77 GVPR 80 (314)
T ss_dssp SCCC
T ss_pred CcCC
Confidence 7543
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00045 Score=58.07 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=69.4
Q ss_pred CccCCCCCCCeEEEEcCC---hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc
Q 014177 31 AHFQMKNRNARVLVLGGT---GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 31 ~~~~~~~~~~~VlV~Ga~---G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
++.+.-++.++|.|+|++ |.+|..+++.|.+. |++|+..+++.+.. . .+ .-..++.++.+
T Consensus 6 ~~~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i-------~-G~-------~~~~s~~el~~ 68 (138)
T 1y81_A 6 HHGSNSKEFRKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-------E-GL-------KCYRSVRELPK 68 (138)
T ss_dssp --------CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-------T-TE-------ECBSSGGGSCT
T ss_pred cccccccCCCeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE-------C-Ce-------eecCCHHHhCC
Confidence 345555778999999976 88999999999986 78866655443211 0 11 11223445556
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
.+|+++-+..+.. ...+++.|.+.|++.+-+..+.. ...+.+.++++|+.++
T Consensus 69 ~vDlvii~vp~~~---v~~v~~~~~~~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~i 120 (138)
T 1y81_A 69 DVDVIVFVVPPKV---GLQVAKEAVEAGFKKLWFQPGAE----SEEIRRFLEKAGVEYS 120 (138)
T ss_dssp TCCEEEECSCHHH---HHHHHHHHHHTTCCEEEECTTSC----CHHHHHHHHHHTCEEE
T ss_pred CCCEEEEEeCHHH---HHHHHHHHHHcCCCEEEEcCccH----HHHHHHHHHHCCCEEE
Confidence 8999999886432 26788889999998765443321 2345566778888764
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00056 Score=65.86 Aligned_cols=112 Identities=23% Similarity=0.245 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|.|+| .|.+|+.+++.|.+. |++|++.+|++++.+.+.+. .+.. ..++.++++++|+||-|.
T Consensus 29 ~~~~~I~iIG-~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~---g~~~-------~~~~~e~~~~aDvVi~~v 95 (320)
T 4dll_A 29 PYARKITFLG-TGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL---GATI-------HEQARAAARDADIVVSML 95 (320)
T ss_dssp CCCSEEEEEC-CTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT---TCEE-------ESSHHHHHTTCSEEEECC
T ss_pred cCCCEEEEEC-ccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC---CCEe-------eCCHHHHHhcCCEEEEEC
Confidence 3457999998 699999999999997 89999999999998887653 2221 123556778899999887
Q ss_pred CCCCCCchHHHHH-----HHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 117 GPFQQAPKCTVLE-----AAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 117 gp~~~~~~~~v~~-----aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
..... ...++. ..+..+...||.++.... ....+.+..++.|+..
T Consensus 96 p~~~~--~~~v~~~~~~~~~l~~~~~vi~~st~~~~--~~~~~~~~~~~~g~~~ 145 (320)
T 4dll_A 96 ENGAV--VQDVLFAQGVAAAMKPGSLFLDMASITPR--EARDHAARLGALGIAH 145 (320)
T ss_dssp SSHHH--HHHHHTTTCHHHHCCTTCEEEECSCCCHH--HHHHHHHHHHHTTCEE
T ss_pred CCHHH--HHHHHcchhHHhhCCCCCEEEecCCCCHH--HHHHHHHHHHHcCCEE
Confidence 53211 012221 112345566777754322 2223333444455544
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00071 Score=66.36 Aligned_cols=96 Identities=18% Similarity=0.204 Sum_probs=60.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|++|.|+||+|++|+.+++.|++++ +..++.....+. ..+.+ ..+.+ .+....|..|.+. ++++|+||.|+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v-~~~~g-~~i~~~~~~~~~~----~~~~DvVf~a~ 73 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAA-PSFGG-TTGTLQDAFDLEA----LKALDIIVTCQ 73 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBC-CGGGT-CCCBCEETTCHHH----HHTCSEEEECS
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCc-cccCC-CceEEEecCChHH----hcCCCEEEECC
Confidence 4689999999999999999544433 224555554431 21111 01111 2333445555443 35899999998
Q ss_pred CCCCCCchHHHHHHHHHcCC--cEEEeCCC
Q 014177 117 GPFQQAPKCTVLEAAIETKT--AYIDVCDD 144 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv--~~vdis~~ 144 (429)
|.+.. ...+....+.|+ ..||.+++
T Consensus 74 g~~~s---~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 74 GGDYT---NEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp CHHHH---HHHHHHHHHTTCCCEEEECSST
T ss_pred CchhH---HHHHHHHHHCCCCEEEEcCChh
Confidence 75432 577788889998 56888765
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0011 Score=62.66 Aligned_cols=67 Identities=22% Similarity=0.251 Sum_probs=52.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|++|.|+| .|.+|+.+++.|.+. |++|++.+|++++.+.+.+. .+.. .. ++.++++++|+||.|...
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~---g~~~----~~---~~~~~~~~advvi~~v~~ 67 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVAL---GARQ----AS---SPAEVCAACDITIAMLAD 67 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHH---TCEE----CS---CHHHHHHHCSEEEECCSS
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC---CCee----cC---CHHHHHHcCCEEEEEcCC
Confidence 46899999 699999999999997 78999999999998887653 2221 12 345566789999998753
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0011 Score=65.10 Aligned_cols=97 Identities=11% Similarity=0.160 Sum_probs=69.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+.+|+|+|+ |.+|..+++.+... |++|++.+++.++++.+.+.++. + ..+|..+.+.+.++..++|+||+++|
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~lGa--~-~v~~~~~~~~~~~~~~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNFGA--D-SFLVSRDQEQMQAAAGTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTSCC--S-EEEETTCHHHHHHTTTCEEEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCC--c-eEEeccCHHHHHHhhCCCCEEEECCC
Confidence 4679999996 88999999988876 78999999999888776655642 2 23577787777777778999999997
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
..... ...++ +++.+-.++.++.
T Consensus 261 ~~~~~--~~~~~-~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 261 AVHPL--LPLFG-LLKSHGKLILVGA 283 (366)
T ss_dssp SCCCS--HHHHH-HEEEEEEEEECCC
T ss_pred cHHHH--HHHHH-HHhcCCEEEEEcc
Confidence 43211 23333 3344446666553
|
| >1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00038 Score=67.66 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=66.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHhCCCcEEEEe-eCCC---------hHHHHHHhcC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTLGKNSEFAEV-NIYN---------EGSLLMALRD 108 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~-Dl~d---------~~~l~~~~~~ 108 (429)
.||.|+|+ |.+|+.+++.|.+ +++.+++. .+++.++...+....+ +....- |..+ .+.+++++++
T Consensus 2 ikVgIiGa-G~iG~~~~r~L~~-~p~~elvav~d~~~~~~~~~a~~~g--~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~ 77 (340)
T 1b7g_O 2 VNVAVNGY-GTIGKRVADAIIK-QPDMKLVGVAKTSPNYEAFIAHRRG--IRIYVPQQSIKKFEESGIPVAGTVEDLIKT 77 (340)
T ss_dssp EEEEEECC-SHHHHHHHHHHHT-CTTEEEEEEECSSCSHHHHHHHHTT--CCEECCGGGHHHHHTTTCCCCCCHHHHHHH
T ss_pred eEEEEEec-CHHHHHHHHHHHc-CCCCEEEEEEcCChHHHHHHHHhcC--cceecCcCHHHHhcccccccccCHhHhhcC
Confidence 58999998 9999999999987 47788764 4677666555554422 222111 1100 0012244457
Q ss_pred ccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 109 VDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 109 ~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+|+||-|++.+.. ....+.+++.|++.||.++.
T Consensus 78 vDvV~~aTp~~~s---~~~a~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 78 SDIVVDTTPNGVG---AQYKPIYLQLQRNAIFQGGE 110 (340)
T ss_dssp CSEEEECCSTTHH---HHHHHHHHHTTCEEEECTTS
T ss_pred CCEEEECCCCchh---HHHHHHHHHcCCeEEEeCCC
Confidence 9999999876543 56788889999999999877
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00026 Score=66.05 Aligned_cols=70 Identities=17% Similarity=0.272 Sum_probs=53.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.+++|.|+|+ |.+|+.+++.|.+. +++ |.+.+|++++++.+.+.++ +.. . .+ +.++++++|+||.|.
T Consensus 9 ~~m~i~iiG~-G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g--~~~--~--~~---~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 9 EDTPIVLIGA-GNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVE--AEY--T--TD---LAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTT--CEE--E--SC---GGGSCSCCSEEEECC
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcC--Cce--e--CC---HHHHhcCCCEEEEec
Confidence 3468999995 99999999999987 677 8899999999888776543 222 1 22 334567899999998
Q ss_pred CCC
Q 014177 117 GPF 119 (429)
Q Consensus 117 gp~ 119 (429)
.+.
T Consensus 77 ~~~ 79 (266)
T 3d1l_A 77 KDS 79 (266)
T ss_dssp CHH
T ss_pred CHH
Confidence 643
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0013 Score=62.78 Aligned_cols=69 Identities=17% Similarity=0.080 Sum_probs=52.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++++|.|+| .|.+|+.+++.|.+. |++|++.+|++++.+.+.+. .......| +.++++++|+||-|..
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~---g~~~~~~~------~~e~~~~aDvvi~~vp 73 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE---GACGAAAS------AREFAGVVDALVILVV 73 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT---TCSEEESS------STTTTTTCSEEEECCS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc---CCccccCC------HHHHHhcCCEEEEECC
Confidence 457899998 699999999999997 89999999999998887653 12211112 3345678999998875
Q ss_pred C
Q 014177 118 P 118 (429)
Q Consensus 118 p 118 (429)
.
T Consensus 74 ~ 74 (303)
T 3g0o_A 74 N 74 (303)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0078 Score=57.69 Aligned_cols=151 Identities=11% Similarity=0.035 Sum_probs=92.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceE-EEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH--------hcCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQI-VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA--------LRDV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v-~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~--------~~~~ 109 (429)
|++|.|+|++|++|...++.|.+. +.++ .++|+++++. ...+..+ .... .+|.+++.+. -.++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~~~-~~~~----~~~~~~ll~~~~~l~~~~~~~v 74 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT--GNCLVSAYDINDSVG-IIDSISP-QSEF----FTEFEFFLDHASNLKRDSATAL 74 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGTCT-TCEE----ESSHHHHHHHHHHHTTSTTTSC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhhCC-CCcE----ECCHHHHHHhhhhhhhccCCCC
Confidence 679999997789999999999885 5555 4567777653 2222221 2222 1344444321 2479
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHHh
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARN 189 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~~ 189 (429)
|+|+.|..+... ..++..|+++|.|.+-=---..-......+.+.++++|+.+..+.-.-+...-..+..+++.
T Consensus 75 D~V~I~tP~~~H---~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--- 148 (318)
T 3oa2_A 75 DYVSICSPNYLH---YPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAR--- 148 (318)
T ss_dssp CEEEECSCGGGH---HHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHH---
T ss_pred cEEEECCCcHHH---HHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhcCHHHHHHHHHHhc---
Confidence 999998866543 68899999999886521000011234446667778889888776544344433334444432
Q ss_pred hcCCCCeEEEEEee
Q 014177 190 ESKGEPERLRFSYY 203 (429)
Q Consensus 190 ~~~~~v~~i~~~~~ 203 (429)
-...++..++..+.
T Consensus 149 g~iG~i~~v~~~~~ 162 (318)
T 3oa2_A 149 EKSPHKYEVDLTYI 162 (318)
T ss_dssp S-CSSCEEEEEEEE
T ss_pred CCCCceEEEEEEEE
Confidence 23457777777543
|
| >4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0021 Score=63.15 Aligned_cols=118 Identities=11% Similarity=0.070 Sum_probs=80.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+.||.|+| +|| |+.-++.+.+..++++++ +++|+.+++++++++++ +.. .+|. +++++++|+|+-+..
T Consensus 7 ~~rv~VvG-~G~-g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~g--v~~----~~~~---~~l~~~~D~v~i~~p 75 (372)
T 4gmf_A 7 KQRVLIVG-AKF-GEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFG--IPL----YTSP---EQITGMPDIACIVVR 75 (372)
T ss_dssp CEEEEEEC-STT-THHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTT--CCE----ESSG---GGCCSCCSEEEECCC
T ss_pred CCEEEEEe-hHH-HHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhC--CCE----ECCH---HHHhcCCCEEEEECC
Confidence 46899999 585 998788777643357776 67899999999998875 332 2343 345678999988764
Q ss_pred CCCCCc-hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecC
Q 014177 118 PFQQAP-KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 118 p~~~~~-~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~ 169 (429)
.....+ ...++.+|+++|+|.+.=- +--......+.+.++++|+.+.++.
T Consensus 76 ~~~h~~~~~~~a~~al~aGkhVl~EK--Pl~~~ea~~l~~~A~~~g~~~~v~~ 126 (372)
T 4gmf_A 76 STVAGGAGTQLARHFLARGVHVIQEH--PLHPDDISSLQTLAQEQGCCYWINT 126 (372)
T ss_dssp --CTTSHHHHHHHHHHHTTCEEEEES--CCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CcccchhHHHHHHHHHHcCCcEEEec--CCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 332111 2578999999999876311 1112345567778899999988774
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00057 Score=66.96 Aligned_cols=78 Identities=17% Similarity=0.165 Sum_probs=54.2
Q ss_pred cCCCCCCC-eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCc----EEEEeeCCChHHH
Q 014177 33 FQMKNRNA-RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNS----EFAEVNIYNEGSL 102 (429)
Q Consensus 33 ~~~~~~~~-~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v----~~~~~Dl~d~~~l 102 (429)
.++.+++| +|.|+| +|.+|..++..|.+. |++|++.+|++++++.+.+... +.. ..... .+ .
T Consensus 8 ~~~~~m~M~kI~iIG-~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~---~ 79 (366)
T 1evy_A 8 AKDELLYLNKAVVFG-SGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT--SD---V 79 (366)
T ss_dssp -CCCCCCEEEEEEEC-CSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE--SC---H
T ss_pred hhhHhhccCeEEEEC-CCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccccccceeee--CC---H
Confidence 34445544 899999 599999999999986 7899999999988887765421 010 01111 12 4
Q ss_pred HHHhcCccEEEecCCC
Q 014177 103 LMALRDVDLVVHAAGP 118 (429)
Q Consensus 103 ~~~~~~~DvVi~~agp 118 (429)
.++++++|+||-|..+
T Consensus 80 ~~~~~~aDvVilav~~ 95 (366)
T 1evy_A 80 EKAYNGAEIILFVIPT 95 (366)
T ss_dssp HHHHTTCSSEEECCCH
T ss_pred HHHHcCCCEEEECCCh
Confidence 4567789999998754
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00054 Score=62.18 Aligned_cols=70 Identities=14% Similarity=0.256 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|+|++|.|+| +|.+|+.+++.|.+. +++|++ .+|++++++++.+.++.. .. . .+. +.++++|+||.+
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~g~~--~~-~--~~~----~~~~~aDvVila 88 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRFGAS--VK-A--VEL----KDALQADVVILA 88 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHHTTT--EE-E--CCH----HHHTTSSEEEEE
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHhCCC--cc-c--ChH----HHHhcCCEEEEe
Confidence 4468999999 799999999999987 788988 899999999887766422 11 1 222 235789999999
Q ss_pred CCC
Q 014177 116 AGP 118 (429)
Q Consensus 116 agp 118 (429)
..+
T Consensus 89 vp~ 91 (220)
T 4huj_A 89 VPY 91 (220)
T ss_dssp SCG
T ss_pred CCh
Confidence 854
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00033 Score=68.01 Aligned_cols=94 Identities=16% Similarity=0.197 Sum_probs=61.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcC-CCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLC-PDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
++|.|+||+|++|..+++.|.++. |..++..+..+....+.+. +. ..+...-|+.+ +.++++|+||-|+|.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~--~~-~~~~~~~~~~~-----~~~~~~Dvvf~a~~~ 73 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA--FR-GQEIEVEDAET-----ADPSGLDIALFSAGS 73 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE--ET-TEEEEEEETTT-----SCCTTCSEEEECSCH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee--ec-CCceEEEeCCH-----HHhccCCEEEECCCh
Confidence 589999999999999999888852 5556666543222111110 11 12223333332 234689999999875
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+.. ...+..+.+.|+..||.+++
T Consensus 74 ~~s---~~~a~~~~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 74 AMS---KVQAPRFAAAGVTVIDNSSA 96 (344)
T ss_dssp HHH---HHHHHHHHHTTCEEEECSST
T ss_pred HHH---HHHHHHHHhCCCEEEECCCc
Confidence 432 57777888999999999975
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00034 Score=72.12 Aligned_cols=115 Identities=14% Similarity=0.185 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH-HhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM-ALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~-~~~~~DvVi~~ 115 (429)
+.+++++|+|| |.+|++++..|++. |++|++++|+.++++++++.++..+ .++.| +.+ ....+|++|||
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~--G~~V~i~~R~~~~a~~la~~~~~~~----~~~~d---l~~~~~~~~DilVN~ 431 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEK--GAKVVIANRTYERALELAEAIGGKA----LSLTD---LDNYHPEDGMVLANT 431 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHH--CC-CEEEESSHHHHHHHHHHTTC-C----EETTT---TTTC--CCSEEEEEC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCce----eeHHH---hhhccccCceEEEEC
Confidence 56789999998 57999999999998 7799999999999999888774322 23333 222 12358999999
Q ss_pred CCCCCCC--chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 116 AGPFQQA--PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 116 agp~~~~--~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
+|..... ...++.+...+.....+|+...+.. .++...+++.|..+
T Consensus 432 agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~----T~ll~~a~~~G~~~ 479 (523)
T 2o7s_A 432 TSMGMQPNVEETPISKDALKHYALVFDAVYTPRI----TRLLREAEESGAIT 479 (523)
T ss_dssp SSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS----CHHHHHHHTTTCEE
T ss_pred CCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc----CHHHHHHHHCCCEE
Confidence 9743210 0011222222333345677544322 23444555667554
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0018 Score=65.63 Aligned_cols=100 Identities=18% Similarity=0.284 Sum_probs=77.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
.++|+|+|| |.+|..+++.|.+ +++|.+..++.++++.+++.++ +..++.+|.+|.+-|.+. ++++|++|-+.+
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L~~---~~~v~iIE~d~~r~~~la~~l~-~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRLEQ---TYSVKLIERNLQRAEKLSEELE-NTIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHHHCT-TSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred ccEEEEEcc-hHHHHHHHHHhhh---cCceEEEecCHHHHHHHHHHCC-CceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 478999995 8899999999865 4799999999999999999985 678899999999987765 568999998765
Q ss_pred CCCCCchHHHH--HHHHHcCCcEEEe-CCChhH
Q 014177 118 PFQQAPKCTVL--EAAIETKTAYIDV-CDDTIY 147 (429)
Q Consensus 118 p~~~~~~~~v~--~aa~~~gv~~vdi-s~~~~~ 147 (429)
- ...+++ -.|.+.|++.+-. .....|
T Consensus 310 ~----De~Ni~~~llAk~~gv~kvIa~vn~~~~ 338 (461)
T 4g65_A 310 E----DETNIMSAMLAKRMGAKKVMVLIQRGAY 338 (461)
T ss_dssp C----HHHHHHHHHHHHHTTCSEEEEECSCHHH
T ss_pred C----cHHHHHHHHHHHHcCCccccccccccch
Confidence 2 224444 3567889887533 334444
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00064 Score=65.64 Aligned_cols=96 Identities=19% Similarity=0.206 Sum_probs=65.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH---HHHHHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG---SLLMALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~---~l~~~~~--~~DvV 112 (429)
.+++|+|+||+|.+|..+++.+... |.+|++.+++.++++.+ ++++.. ..+|..+.+ .+.+... ++|+|
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~-~~~ga~---~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIA-KEYGAE---YLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH-HHTTCS---EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH-HHcCCc---EEEeCCCchHHHHHHHHhCCCCceEE
Confidence 4579999999999999999988876 78999999998887744 445421 234655543 3444432 69999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
|+|+|... ....-.+++.+-.++.++.
T Consensus 222 id~~g~~~----~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 222 FDSVGKDT----FEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EECCGGGG----HHHHHHHEEEEEEEEECCC
T ss_pred EECCChHH----HHHHHHHhccCCEEEEEcC
Confidence 99998521 2333345555556676653
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00063 Score=64.49 Aligned_cols=91 Identities=20% Similarity=0.208 Sum_probs=61.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|+|.|+| +|.+|+.+++.|.+. +++|++.+|++++.+.+.+. .+.. ..+ +.++++++|+||.|....
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~---g~~~----~~~---~~~~~~~~D~vi~~v~~~ 72 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA---GAET----AST---AKAIAEQCDVIITMLPNS 72 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT---TCEE----CSS---HHHHHHHCSEEEECCSSH
T ss_pred ceEEEEC-chHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC---CCee----cCC---HHHHHhCCCEEEEECCCH
Confidence 6899999 699999999999986 78999999999988877653 2221 223 345566899999998622
Q ss_pred CCCchHHHH------HHHHHcCCcEEEeCCCh
Q 014177 120 QQAPKCTVL------EAAIETKTAYIDVCDDT 145 (429)
Q Consensus 120 ~~~~~~~v~------~aa~~~gv~~vdis~~~ 145 (429)
.. ...++ ...++.+...++++...
T Consensus 73 ~~--~~~~~~~~~~l~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 73 PH--VKEVALGENGIIEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp HH--HHHHHHSTTCHHHHCCTTCEEEECSCCC
T ss_pred HH--HHHHHhCcchHhhcCCCCCEEEECCCCC
Confidence 11 02233 12234466667776443
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00083 Score=63.40 Aligned_cols=71 Identities=20% Similarity=0.234 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc---eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL---QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~---~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
|++++|.|+| +|.+|+.+++.|.+. ++ +|++.+|++++++++.+.++ +... .+ ..+.++++|+||
T Consensus 1 M~~~~I~iIG-~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~~g--i~~~----~~---~~~~~~~aDvVi 68 (280)
T 3tri_A 1 MNTSNITFIG-GGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEKCG--VHTT----QD---NRQGALNADVVV 68 (280)
T ss_dssp -CCSCEEEES-CSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHTTC--CEEE----SC---HHHHHSSCSEEE
T ss_pred CCCCEEEEEc-ccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHHcC--CEEe----CC---hHHHHhcCCeEE
Confidence 3467899999 599999999999987 56 89999999999988877543 3221 12 345678999999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
-|..|.
T Consensus 69 lav~p~ 74 (280)
T 3tri_A 69 LAVKPH 74 (280)
T ss_dssp ECSCGG
T ss_pred EEeCHH
Confidence 998653
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0024 Score=60.93 Aligned_cols=113 Identities=19% Similarity=0.153 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++++|.|+| .|.+|+.+++.|.+. |++|++.+|++++.+.+.+. .+.. .. ++.++++++|+||.|.
T Consensus 7 ~~~~~IgiIG-~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~---g~~~----~~---~~~e~~~~aDvVi~~v 73 (306)
T 3l6d_A 7 SFEFDVSVIG-LGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAA---GAHL----CE---SVKAALSASPATIFVL 73 (306)
T ss_dssp CCSCSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH---TCEE----CS---SHHHHHHHSSEEEECC
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC---CCee----cC---CHHHHHhcCCEEEEEe
Confidence 4567899999 699999999999997 78999999999998887653 1211 22 3456677899999997
Q ss_pred CCCCCCchHHHHH----HHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 117 GPFQQAPKCTVLE----AAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 117 gp~~~~~~~~v~~----aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
..... ...++. .....|.-.||.++...- ....+.+..++.|+..+
T Consensus 74 p~~~~--~~~v~~~~~l~~~~~g~ivid~st~~~~--~~~~l~~~~~~~g~~~v 123 (306)
T 3l6d_A 74 LDNHA--THEVLGMPGVARALAHRTIVDYTTNAQD--EGLALQGLVNQAGGHYV 123 (306)
T ss_dssp SSHHH--HHHHHTSTTHHHHTTTCEEEECCCCCTT--HHHHHHHHHHHTTCEEE
T ss_pred CCHHH--HHHHhcccchhhccCCCEEEECCCCCHH--HHHHHHHHHHHcCCeEE
Confidence 53211 012221 123456677888765432 22233344555676554
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0012 Score=62.47 Aligned_cols=111 Identities=19% Similarity=0.143 Sum_probs=70.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
+.++|+|+|++|..|+.+++.|.+. ++++ +++-++.+.. ++. ..+. + ..+++++.+ ++|++|.+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~--g~~~-v~~VnP~~~g---~~i-~G~~-v------y~sl~el~~~~~~Dv~Ii~ 71 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY--GTKI-VAGVTPGKGG---MEV-LGVP-V------YDTVKEAVAHHEVDASIIF 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH--TCEE-EEEECTTCTT---CEE-TTEE-E------ESSHHHHHHHSCCSEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc--CCeE-EEEECCCCCC---ceE-CCEE-e------eCCHHHHhhcCCCCEEEEe
Confidence 3478999999999999999999986 7774 3344443210 000 0111 1 223455555 89999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEE-eCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYID-VCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vd-is~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
..+... ..+++.|.+.|++.+- ++.... ......+.+.+++.|+.++
T Consensus 72 vp~~~~---~~~~~ea~~~Gi~~vVi~t~G~~-~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 72 VPAPAA---ADAALEAAHAGIPLIVLITEGIP-TLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp CCHHHH---HHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHHHHHHHTCEEE
T ss_pred cCHHHH---HHHHHHHHHCCCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEE
Confidence 876543 6889999999999543 442211 1223456667777887654
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.001 Score=64.64 Aligned_cols=78 Identities=13% Similarity=0.084 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEE------EeeCC-ChHHHHHHhcCc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFA------EVNIY-NEGSLLMALRDV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~------~~Dl~-d~~~l~~~~~~~ 109 (429)
|++|+|.|+|+ |.+|+.++..|.+. +++|++.+|++++++.+.+..+ +... ...+. ..+++.++++++
T Consensus 2 m~~mki~iiG~-G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 2 IESKTYAVLGL-GNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGA--IIAEGPGLAGTAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTS--EEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CCcCeEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCC--eEEeccccccccccceecCCHHHHHhcC
Confidence 34579999994 99999999999986 7899999999998888766421 1110 01110 112345567789
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||.|+...
T Consensus 77 D~vi~~v~~~ 86 (359)
T 1bg6_A 77 DVILIVVPAI 86 (359)
T ss_dssp SEEEECSCGG
T ss_pred CEEEEeCCch
Confidence 9999998654
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0012 Score=63.32 Aligned_cols=94 Identities=19% Similarity=0.138 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCc--eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH-HhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDL--QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM-ALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~--~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~-~~~~~DvVi 113 (429)
++.++|.|+| .|.+|..+++.|.+. |+ +|++.||++++++...+ .+ -+..... + +.+ +++++|+||
T Consensus 31 ~~~~kI~IIG-~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~-~G-~~~~~~~---~---~~~~~~~~aDvVi 99 (314)
T 3ggo_A 31 LSMQNVLIVG-VGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVD-LG-IIDEGTT---S---IAKVEDFSPDFVM 99 (314)
T ss_dssp CSCSEEEEES-CSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHH-TT-SCSEEES---C---TTGGGGGCCSEEE
T ss_pred cCCCEEEEEe-eCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHH-CC-CcchhcC---C---HHHHhhccCCEEE
Confidence 5568999999 699999999999997 66 99999999988776543 22 1111111 2 234 578999999
Q ss_pred ecCCCCCCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 114 HAAGPFQQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
.|+.+... ..+++... +.+.-.+|+++.
T Consensus 100 lavp~~~~---~~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 100 LSSPVRTF---REIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp ECSCGGGH---HHHHHHHHHHSCTTCEEEECCSC
T ss_pred EeCCHHHH---HHHHHHHhhccCCCcEEEECCCC
Confidence 99876432 34444333 235555676644
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.001 Score=63.73 Aligned_cols=96 Identities=16% Similarity=0.236 Sum_probs=67.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchh-HHHHHHHhCCCcEEEEeeCCChHHHHHH--hcCccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREK-GAAMVSTLGKNSEFAEVNIYNEGSLLMA--LRDVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~~~l~~~--~~~~DvVi~ 114 (429)
+.+|.|+| +|.+|+.+++.|.++.++.+++ ++++++++ .+++.+.++. ... ..+.+++.+. ..++|+||.
T Consensus 4 ~irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~--~~~---~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGV--TTT---YAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTC--CEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CCEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCC--Ccc---cCCHHHHHhccCCCCCcEEEE
Confidence 46899999 7999999999997645677654 56888887 6777666542 111 1233333222 246899999
Q ss_pred cCCCCCCCchHHHHHHHHHc--CCcEEEeCC
Q 014177 115 AAGPFQQAPKCTVLEAAIET--KTAYIDVCD 143 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~--gv~~vdis~ 143 (429)
|++.... ......|+++ |.+.+|.+.
T Consensus 78 atp~~~h---~~~a~~al~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 78 ATSASAH---VQNEALLRQAKPGIRLIDLTP 105 (312)
T ss_dssp CSCHHHH---HHHHHHHHHHCTTCEEEECST
T ss_pred CCChHHH---HHHHHHHHHhCCCCEEEEcCc
Confidence 9874322 5778888999 999998664
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00086 Score=64.49 Aligned_cols=71 Identities=13% Similarity=0.090 Sum_probs=49.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCch---hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNRE---KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~---~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
++++|.|+| .|.+|..++..|++. | ++|++.+|+++ +.+...+.+. ..+ .. . ++.++++++|+|
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~-~----s~~e~~~~aDvV 91 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAELGV---EP-L----DDVAGIACADVV 91 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EE-E----SSGGGGGGCSEE
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHCCC---CC-C----CHHHHHhcCCEE
Confidence 457899999 699999999999987 7 89999999972 2222222211 122 11 0 233567789999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
|-|..+.
T Consensus 92 i~avp~~ 98 (317)
T 4ezb_A 92 LSLVVGA 98 (317)
T ss_dssp EECCCGG
T ss_pred EEecCCH
Confidence 9998654
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.003 Score=60.41 Aligned_cols=70 Identities=9% Similarity=0.079 Sum_probs=50.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecC--chhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRN--REKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~--~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.+++|.|+| .|.+|..+++.|.+. |+ +|++.+|+ +++.+.+.+ . .+.. ..+ +.++++++|+||-
T Consensus 23 ~~~~I~iIG-~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~-~--g~~~----~~~---~~e~~~~aDvVi~ 89 (312)
T 3qsg_A 23 NAMKLGFIG-FGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEE-L--GVSC----KAS---VAEVAGECDVIFS 89 (312)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHH-T--TCEE----CSC---HHHHHHHCSEEEE
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHH-C--CCEE----eCC---HHHHHhcCCEEEE
Confidence 467999999 699999999999997 78 99999997 455555443 2 2221 123 4456678999999
Q ss_pred cCCCCC
Q 014177 115 AAGPFQ 120 (429)
Q Consensus 115 ~agp~~ 120 (429)
|..+..
T Consensus 90 ~vp~~~ 95 (312)
T 3qsg_A 90 LVTAQA 95 (312)
T ss_dssp CSCTTT
T ss_pred ecCchh
Confidence 986543
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00043 Score=65.87 Aligned_cols=90 Identities=13% Similarity=0.068 Sum_probs=61.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+++|.|+| .|.+|..+++.|.+. |++|++.+|++++.+.+.+. .+.. . .++.++++ +|+||.|...
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~---g~~~----~---~~~~~~~~-aDvvi~~vp~ 80 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA---GATL----A---DSVADVAA-ADLIHITVLD 80 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT---TCEE----C---SSHHHHTT-SSEEEECCSS
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC---CCEE----c---CCHHHHHh-CCEEEEECCC
Confidence 46899999 699999999999987 78999999999998887652 2221 1 23556777 9999998753
Q ss_pred CCCCchHHHHHHHH---HcCCcEEEeCCC
Q 014177 119 FQQAPKCTVLEAAI---ETKTAYIDVCDD 144 (429)
Q Consensus 119 ~~~~~~~~v~~aa~---~~gv~~vdis~~ 144 (429)
... ...+++... +.+...||.++.
T Consensus 81 ~~~--~~~v~~~l~~~l~~g~ivv~~st~ 107 (296)
T 3qha_A 81 DAQ--VREVVGELAGHAKPGTVIAIHSTI 107 (296)
T ss_dssp HHH--HHHHHHHHHTTCCTTCEEEECSCC
T ss_pred hHH--HHHHHHHHHHhcCCCCEEEEeCCC
Confidence 211 123333332 234455666644
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0016 Score=61.89 Aligned_cols=110 Identities=18% Similarity=0.207 Sum_probs=70.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
..+++|+|++|..|+.+++.|.+. +++ .+++-++.+.. ++. ..+.. ..+++++.+ ++|++|.+.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~--g~~-~V~~VnP~~~g---~~i-~G~~v-------y~sl~el~~~~~~Dv~ii~v 78 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC--GTK-IVGGVTPGKGG---QNV-HGVPV-------FDTVKEAVKETDANASVIFV 78 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT--TCC-EEEEECTTCTT---CEE-TTEEE-------ESSHHHHHHHHCCCEEEECC
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC--CCe-EEEEeCCCCCC---ceE-CCEee-------eCCHHHHhhcCCCCEEEEcc
Confidence 356888899999999999999985 677 45555554320 000 01111 223555555 899999998
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEE-eCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYID-VCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vd-is~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
.+... ..+++.|.+.|++.+- ++.... ......+.+.+++.|+.++
T Consensus 79 p~~~~---~~~v~ea~~~Gi~~vVi~t~G~~-~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 79 PAPFA---KDAVFEAIDAGIELIVVITEHIP-VHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp CHHHH---HHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHHHHHHHTCEEE
T ss_pred CHHHH---HHHHHHHHHCCCCEEEEECCCCC-HHHHHHHHHHHHHcCCEEE
Confidence 76543 6889999999999544 343221 1233466677788887654
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0013 Score=62.55 Aligned_cols=58 Identities=21% Similarity=0.254 Sum_probs=46.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++++|.|+||+|.+|..++..|.+. |++|++.+|+++. +..+.++++|+||-|..
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~-----------------------~~~~~~~~aDvVilavp 74 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWA-----------------------VAESILANADVVIVSVP 74 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGG-----------------------GHHHHHTTCSEEEECSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCccc-----------------------CHHHHhcCCCEEEEeCC
Confidence 3568999998899999999999986 7899999987641 24456788999999986
Q ss_pred CCC
Q 014177 118 PFQ 120 (429)
Q Consensus 118 p~~ 120 (429)
+..
T Consensus 75 ~~~ 77 (298)
T 2pv7_A 75 INL 77 (298)
T ss_dssp GGG
T ss_pred HHH
Confidence 543
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0013 Score=63.98 Aligned_cols=75 Identities=20% Similarity=0.320 Sum_probs=55.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH---HHHHh-cCccEEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS---LLMAL-RDVDLVV 113 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~---l~~~~-~~~DvVi 113 (429)
.+++|+|+||+|.+|..+++.+... |++|++.+++.++++.+.+ ++.. ..+|..+.+. +.+.. .++|+||
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~-lGa~---~~~~~~~~~~~~~~~~~~~~g~Dvvi 240 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER-LGAK---RGINYRSEDFAAVIKAETGQGVDIIL 240 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH-HTCS---EEEETTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh-cCCC---EEEeCCchHHHHHHHHHhCCCceEEE
Confidence 4579999999999999999999886 8899999999988776543 5422 2356655432 32222 2799999
Q ss_pred ecCCC
Q 014177 114 HAAGP 118 (429)
Q Consensus 114 ~~agp 118 (429)
+|+|.
T Consensus 241 d~~g~ 245 (353)
T 4dup_A 241 DMIGA 245 (353)
T ss_dssp ESCCG
T ss_pred ECCCH
Confidence 99984
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0083 Score=57.58 Aligned_cols=77 Identities=19% Similarity=0.275 Sum_probs=49.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcE---EEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSE---FAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~---~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+++|.|+|+ |.+|..++..|+..+..-+|++.|.+.++++.....+..... -..+-..+ .+.++++|+||.+
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~----~~a~~~aDvVii~ 81 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD----YSDVKDCDVIVVT 81 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C----GGGGTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC----HHHhCCCCEEEEc
Confidence 478999997 999999999999862222899999998876655544432110 11111123 3458899999999
Q ss_pred CCCCC
Q 014177 116 AGPFQ 120 (429)
Q Consensus 116 agp~~ 120 (429)
+|...
T Consensus 82 ~g~p~ 86 (318)
T 1y6j_A 82 AGANR 86 (318)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 98543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 429 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 3e-05 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 1e-04 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 3e-04 | |
| d1mlda1 | 144 | c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s | 4e-04 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 5e-04 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 5e-04 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 7e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 8e-04 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.002 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.002 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 0.002 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 0.002 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 0.004 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.1 bits (101), Expect = 3e-05
Identities = 33/215 (15%), Positives = 54/215 (25%), Gaps = 28/215 (13%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
R+L+ GG G VG L + V N G + + N
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHE---VTVVDNFFTGRK--RNVEHWIGHENFELINHD 57
Query: 101 SLLMALRDVDLVVHAAGP-----FQQAPKCT----------VLEAAIETKTAYIDVCDDT 145
+ +VD + H A P + P T +L A +
Sbjct: 58 VVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSE 117
Query: 146 IYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFS---- 201
+Y + ++ I Y +A + + E R
Sbjct: 118 VYGDPEVHPQSEDYWGHVNPIGPRACY-DEGKRVAETMCYAYMKQEGVEVRVARIFNTFG 176
Query: 202 -YYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEI 235
G + L GE + Y G +
Sbjct: 177 PRMHMNDGRVVSNFILQ--ALQGEPLTVYGSGSQT 209
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
+ V+G TGR G S + + + + + A N + + N
Sbjct: 5 TIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 62
Query: 101 SLLMALRDVDLVVHAAGPF 119
L+ L + +
Sbjct: 63 PLMDTLFEGAHLAFINTTS 81
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.8 bits (91), Expect = 3e-04
Identities = 16/111 (14%), Positives = 32/111 (28%), Gaps = 4/111 (3%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
VLV G +GR G L + R+ + +G ++ +I +
Sbjct: 5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IGGEADVFIGDITDAD 60
Query: 101 SLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRA 151
S+ A + +D +V + + + D
Sbjct: 61 SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIG 111
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 38.4 bits (89), Expect = 4e-04
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE 99
A+V VLG +G +G ++ L ++ + G A + + + +
Sbjct: 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GP 59
Query: 100 GSLLMALRDVDLVVHAAGPFQQ 121
L L+ D+VV AG ++
Sbjct: 60 EQLPDCLKGCDVVVIPAGVPRK 81
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 39.1 bits (90), Expect = 5e-04
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 11/95 (11%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV 94
M + V+V G +G L K I+ +R+ EK + S +
Sbjct: 1 MSPGS--VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL 58
Query: 95 NIYNEGSLLMALR---------DVDLVVHAAGPFQ 120
+ + SL + + L+++ AG
Sbjct: 59 TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL 93
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 38.7 bits (89), Expect = 5e-04
Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 22/190 (11%)
Query: 9 NSTATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQI 68
N+TA A +A A +V + + +VL GTG VG +A L+ ++ +
Sbjct: 3 NTTAAAGVALVVKAAGGSV----------KGKKAVVLAGTGPVGMRSAALLAGEGAEVVL 52
Query: 69 VVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVL 128
++ + AA ++ S A++ V A + +L
Sbjct: 53 CGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLE-----LL 107
Query: 129 EAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188
A + I++ D I A G Y G A + +
Sbjct: 108 PQAAWQNESSIEIVADYNAQP-------PLGIGGIDATDKGKEYGGKRAFGALGIGGLKL 160
Query: 189 NESKGEPERL 198
+ +L
Sbjct: 161 KLHRACIAKL 170
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 39.0 bits (90), Expect = 7e-04
Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNS--EFAEVNIYN 98
++L+ GG G +G + + K D + + +S + +++ F +I +
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61
Query: 99 EGSL--LMALRDVDLVVHAAG 117
+ + D V+H A
Sbjct: 62 SAEITRIFEQYQPDAVMHLAA 82
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 38.8 bits (89), Expect = 8e-04
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVV----GSRNREKGAAMVSTLGKNSEFAEVNI 96
RVLV GG+G +G T V L + D+ I+ R+ + GK+ F E +I
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDI 59
Query: 97 YNEGSL--LMALRDVDLVVHAAG 117
NE + ++ +D V+H AG
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAG 82
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (85), Expect = 0.002
Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76
F+M+N++ V +LG +G G + + ++ + R +
Sbjct: 9 DFRMQNKS--VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 51
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 37.7 bits (86), Expect = 0.002
Identities = 33/224 (14%), Positives = 64/224 (28%), Gaps = 28/224 (12%)
Query: 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKG--AAMVSTLGKNSEF 91
Q KN ++V GG G +G + + PD+ + V + G A + + LG E
Sbjct: 1 QFKN----IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVEL 56
Query: 92 AEVNIYNEGSLLMALRDVDLVVHAA-----GPFQQAPKCTV---LEAAIETKTAYIDVCD 143
+I + + D +VH A P + A
Sbjct: 57 VVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI 116
Query: 144 DTIYSQRAKSFKDRAIAANIPAITTGGIYP-------------GVSNVMAAELVRVARNE 190
+ + + D + ++P G + + +V+
Sbjct: 117 RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS 176
Query: 191 SKGEPERLRFSY-YTAGTGGAGPTILATSFLLLGEEVVAYNKGE 233
+ S Y + +L G + Y +G+
Sbjct: 177 FGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK 220
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 37.6 bits (86), Expect = 0.002
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Query: 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV 94
+ N ++ + G G + A L V+ S ++ ++ EF V
Sbjct: 11 WPSENLKISITGAGGFIASHIARRLKHEGHY---VIASDWKKNEH--MTEDMFCDEFHLV 65
Query: 95 NIYNEGSLLMALRDVDLVVHAAGPFQQAPKC 125
++ + L VD V + A
Sbjct: 66 DLRVMENCLKVTEGVDHVFNLAADMGGMGFI 96
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.9 bits (84), Expect = 0.002
Identities = 10/78 (12%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG 100
++ + G TG+ G +T + ++ V R+ + + + + ++
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGP---RPAHVVVGDVLQAA 59
Query: 101 SLLMALRDVDLVVHAAGP 118
+ + D V+ G
Sbjct: 60 DVDKTVAGQDAVIVLLGT 77
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 36.1 bits (83), Expect = 0.004
Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 11/106 (10%)
Query: 37 NR--NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEV 94
NR LV GG VG L ++ N G + + LG+ S F
Sbjct: 2 NRLQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRH 59
Query: 95 NIYNEGSLLMALRDV-------DLVVHAAGPFQQAPKCTVLEAAIE 133
++ +E + + V +++V+ AG T
Sbjct: 60 DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFS 105
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 429 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.66 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.64 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.64 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.63 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.6 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.6 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.59 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.58 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.58 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.58 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.56 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.51 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.51 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.49 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.49 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.47 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.46 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.45 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.44 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.41 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.38 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.37 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.35 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.34 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.34 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.33 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.33 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.32 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.32 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.3 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.28 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.27 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.27 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.27 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.27 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.26 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.26 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.26 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.25 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.25 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.24 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.24 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.24 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.23 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.23 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.23 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.22 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.22 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.21 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.21 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.21 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.2 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.2 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.2 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.19 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.19 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.19 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.19 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.17 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.16 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.15 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.15 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.13 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.1 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.08 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.08 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.08 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 99.07 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.06 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.05 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.04 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.03 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.98 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 98.97 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.96 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.96 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.95 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.93 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.92 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.91 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.91 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.81 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 98.79 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.77 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.71 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 98.67 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.66 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.59 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.54 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.54 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.51 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.5 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.32 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.25 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.22 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.13 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.12 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.1 | |
| d1e5qa2 | 267 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.1 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.09 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.08 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 98.05 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.03 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.99 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.98 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.94 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.94 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.94 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 97.94 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.83 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 97.81 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.8 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 97.78 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.77 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 97.76 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.71 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 97.68 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.66 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 97.64 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.63 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.62 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.61 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.6 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 97.59 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 97.59 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.58 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.55 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.52 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.49 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.46 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.41 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.41 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.4 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.37 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.36 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.35 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.34 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.33 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.31 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.31 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.3 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.29 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.28 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.25 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.21 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.2 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.18 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.17 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.15 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.15 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.14 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.11 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.07 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 97.07 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 97.07 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.06 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.06 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.05 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.05 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.03 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 97.01 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.0 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.99 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.98 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.97 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.96 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.94 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.92 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.9 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.87 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.86 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.86 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.84 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.8 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.78 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.75 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.74 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.65 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.63 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.6 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.59 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.55 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.49 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.4 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.39 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.36 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.33 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.32 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.29 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.29 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 96.27 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.24 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.24 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.19 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.17 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.15 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 96.12 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 96.11 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.11 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.1 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.1 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.06 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 96.03 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.03 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.01 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.98 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.9 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.87 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 95.85 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.67 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.66 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.64 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 95.61 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.6 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.54 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 95.53 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.5 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.48 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.43 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.42 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 95.28 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 95.27 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.25 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.22 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.21 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.14 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.09 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.94 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 94.77 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.77 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.75 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.7 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.66 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 94.66 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 94.46 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.46 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 94.37 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.34 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.32 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 94.32 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 94.31 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.22 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.21 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 94.15 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.09 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.08 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 93.98 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.91 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.89 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.59 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.52 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 93.48 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 93.39 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.3 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 93.26 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 93.25 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 93.2 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.2 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.17 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.15 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 93.07 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 93.06 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 93.03 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.97 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 92.83 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.74 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.67 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 92.59 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.32 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 92.2 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.12 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 92.12 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 92.0 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 91.89 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.78 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 91.74 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 91.59 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 91.55 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.51 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 91.29 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 91.18 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 91.17 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 91.15 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 91.08 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 90.9 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 90.86 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 90.84 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 90.82 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 90.82 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 90.74 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 90.59 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.19 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 90.16 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 89.45 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 89.34 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 88.71 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 88.46 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 87.62 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 87.61 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 87.41 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 87.28 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 87.11 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 86.09 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 85.86 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 85.8 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 85.73 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 85.73 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 85.67 | |
| d1iowa1 | 96 | D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge | 85.39 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 85.11 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 85.11 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 85.11 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 85.07 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 84.97 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 84.85 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 84.84 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 84.76 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 84.59 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 83.53 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 83.25 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 83.0 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 82.72 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 82.59 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 82.27 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 82.21 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 81.93 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 81.56 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 81.44 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 81.42 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 81.42 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 81.36 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 81.16 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 80.08 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=5.7e-17 Score=157.87 Aligned_cols=160 Identities=14% Similarity=0.048 Sum_probs=116.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-----hhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhc--Cc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-----EKGAAMVST---LGKNSEFAEVNIYNEGSLLMALR--DV 109 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-----~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~--~~ 109 (429)
|+||||||+||||+++++.|++. |++|++++|.. .+++.+... ...+++++++|++|.+++.++++ ++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 78999999999999999999997 89999999853 233333222 22578999999999999999998 56
Q ss_pred cEEEecCCCCCC---------------CchHHHHHHHHHcCCc----EEEeCCChhHHHH-HHhhHHHHHHcCCcEEecC
Q 014177 110 DLVVHAAGPFQQ---------------APKCTVLEAAIETKTA----YIDVCDDTIYSQR-AKSFKDRAIAANIPAITTG 169 (429)
Q Consensus 110 DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~----~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~~~ 169 (429)
|+|+|+|+..+. .++.+++++|.+.+++ +|.+|+...|... ..+.+|. .+. ..
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~-----~~~--~P 152 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPF--YP 152 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCC--CC
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCC-----CCC--CC
Confidence 999999976431 2467889999998764 6777766555221 1122221 111 12
Q ss_pred CCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 170 GIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 170 g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
-..||.||+.++.+++.|.++++.++..+|+ ++++||..
T Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~-~~vyGp~~ 191 (357)
T d1db3a_ 153 RSPYAVAKLYAYWITVNYRESYGMYACNGIL-FNHESPRR 191 (357)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-CCEECTTS
T ss_pred CChHHHHHHHHHHHHHHHHHHhCCCEEEEEe-ccccCCCC
Confidence 3569999999999999999888889999998 67899864
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.64 E-value=2.1e-16 Score=152.96 Aligned_cols=197 Identities=16% Similarity=0.164 Sum_probs=133.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc--hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR--EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~--~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+||+||||||+||||+++++.|++.+..+.+++.|+.. .....+......+++++.+|++|.+.+.++++++|.|+|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 47999999999999999999999984344555555311 1111112222357899999999999999999999999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHH----HHhhHHHHHHcCC--cEEecCCCccc
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQR----AKSFKDRAIAANI--PAITTGGIYPG 174 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~----~~~~~~~a~~~g~--~~i~~~g~~pG 174 (429)
|+.... .++.+++++|.+.+.+.+.++++..|... ............. ..-...-..||
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~ 160 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 160 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence 975432 25688899999999999888776655210 0000000000000 00011124599
Q ss_pred hhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHH--HHhCCceEEeeCCeEE
Q 014177 175 VSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSF--LLLGEEVVAYNKGEEI 235 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~--~~~~~~~~v~~~G~~~ 235 (429)
.+|++++.+++.+.++++.+...+|+ +++|||.......+...+ ...+.+..++++|+..
T Consensus 161 ~sK~~~E~~~~~~~~~~~i~~~ilR~-~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~ 222 (346)
T d1oc2a_ 161 STKAASDLIVKAWVRSFGVKATISNC-SNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNV 222 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEE-CCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEee-cceeCCCCCccchhHHHHHHHHcCCceeEeCCCCcc
Confidence 99999999999998888888999998 788998765444433322 2456677777777654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.64 E-value=1.4e-16 Score=155.44 Aligned_cols=193 Identities=16% Similarity=0.188 Sum_probs=130.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCch--hHHHHHHHhC-CCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNRE--KGAAMVSTLG-KNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~--~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|+||||||+||||+++++.|++. +++++ ++++... ..+.+..... .+++++++|++|.+.+.++++ ++|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~--g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 58999999999999999999998 66644 4453211 1111211111 468999999999999998887 689999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCC----------cEEEeCCChhHHHHHH-hhHHHHHHcC---Cc
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKT----------AYIDVCDDTIYSQRAK-SFKDRAIAAN---IP 164 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv----------~~vdis~~~~~~~~~~-~~~~~a~~~g---~~ 164 (429)
|||+.... .++.+++++|.+.++ ++|.+|+...|..... ...+...... -.
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~ 158 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence 99986431 135688999988764 4677776665532111 0000000000 00
Q ss_pred EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 165 AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 165 ~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
......+.||.||++++.++..+.++++.++..+|+ ++++||+......+...+. ..++++.++.+|+++
T Consensus 159 ~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~-~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~ 230 (361)
T d1kewa_ 159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNC-SNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI 230 (361)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE-CEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEec-CceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeE
Confidence 001223559999999999999999888899999998 7889998765555554333 356788888888754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.7e-17 Score=158.67 Aligned_cols=187 Identities=17% Similarity=0.192 Sum_probs=125.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHhC-CCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTLG-KNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l~-~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+||||||||+||+|+++++.|+++ |++|++++|.. .+.+.+..... .+++....|+ ++.++.++|+|||+|
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlA 73 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLA 73 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECc
Confidence 489999999999999999999997 89999998632 22222211111 2234444443 445667899999999
Q ss_pred CCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHH
Q 014177 117 GPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMA 180 (429)
Q Consensus 117 gp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a 180 (429)
+.... .++.+++++|.+.++++|.+|+...|.... .+..+.......+. ..-+.||.||.++
T Consensus 74 a~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~--~p~~~Y~~sK~~~ 151 (312)
T d2b69a1 74 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPI--GPRACYDEGKRVA 151 (312)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS--STTHHHHHHHHHH
T ss_pred ccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCC--CCccHHHHHHHHH
Confidence 86431 146789999999999999888766553211 12222110000111 1224599999999
Q ss_pred HHHHHHHHhhcCCCCeEEEEEeeecCCCCCC--ccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 181 AELVRVARNESKGEPERLRFSYYTAGTGGAG--PTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 181 ~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g--~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
+.+++.+.++++.+...+|+ .++|||++.. ..++...+. ..++++.++.+|...
T Consensus 152 E~~~~~~~~~~~~~~~~lR~-~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~ 209 (312)
T d2b69a1 152 ETMCYAYMKQEGVEVRVARI-FNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT 209 (312)
T ss_dssp HHHHHHHHHHHCCCEEEEEE-CCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE
T ss_pred HHHHHHHHHHhCCcEEEEEe-eeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCee
Confidence 99999998888999999999 6789987643 234443332 357788888887754
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.60 E-value=9.6e-16 Score=147.76 Aligned_cols=161 Identities=22% Similarity=0.280 Sum_probs=113.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
||||||||+||||+++++.|+++ +++|+++||-. ............+++++++|++|.+.+.++++ ++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 67999999999999999999997 79999998622 22232222223579999999999999999988 899999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchh
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
|+|+.... .++.+++++|.+.++.. |.+++...|..... ...+. . .....-..|+.+
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~---~---~~~~p~~~Y~~s 152 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVES---F---PTGTPQSPYGKS 152 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTT---S---CCCCCSSHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccc---c---ccCCCcchHHHH
Confidence 99975321 25688999999999875 45554443321111 11110 0 011223559999
Q ss_pred HHHHHHHHHHHHhh-cCCCCeEEEEEeeecCCCC
Q 014177 177 NVMAAELVRVARNE-SKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 177 ~~~a~~~~~~~~~~-~~~~v~~i~~~~~~~G~~~ 209 (429)
|..+++++..+.++ ...++..+|. ++++|+++
T Consensus 153 K~~~e~~~~~~~~~~~~~~~~ilR~-~~v~G~~~ 185 (338)
T d1udca_ 153 KLMVEQILTDLQKAQPDWSIALLRY-FNPVGAHP 185 (338)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEE-CEEECCCT
T ss_pred HhhhhHHHHHHHhhccCCeEEEEee-ccEEeccC
Confidence 99999998865544 4667778887 67788764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=3.2e-15 Score=146.88 Aligned_cols=194 Identities=18% Similarity=0.142 Sum_probs=128.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC--------------------chhHHHHHHHhCCCcEEEEeeCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN--------------------REKGAAMVSTLGKNSEFAEVNIYN 98 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~--------------------~~~~~~l~~~l~~~v~~~~~Dl~d 98 (429)
+||||||||+||||+++++.|++. |++|+++|.- .+.+.......+.+++++++|++|
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d 78 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 78 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCC
Confidence 589999999999999999999997 8999998720 111222223334578999999999
Q ss_pred hHHHHHHhc--CccEEEecCCCCCC------------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHH-HhhHH
Q 014177 99 EGSLLMALR--DVDLVVHAAGPFQQ------------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRA-KSFKD 156 (429)
Q Consensus 99 ~~~l~~~~~--~~DvVi~~agp~~~------------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~-~~~~~ 156 (429)
.+.++++++ ++|+|||+|+.... .++.+++++|.+.++.. +..+++..++... ....+
T Consensus 79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~ 158 (393)
T d1i24a_ 79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 158 (393)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence 999999987 57999999974321 24678899999988653 3333333222110 00000
Q ss_pred HH---HHcCCc----EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc-----------------
Q 014177 157 RA---IAANIP----AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----------------- 212 (429)
Q Consensus 157 ~a---~~~g~~----~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----------------- 212 (429)
.. ...+.. ........||.||++++.++..+.++++.+...+|+ .+++|++....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~-~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T d1i24a_ 159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQ-GVVYGVKTDETEMHEELRNRLDYDAVFG 237 (393)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeeccc-ccccCCCccccccccccccccccccccc
Confidence 00 000000 001223459999999999999998888889999998 67788764311
Q ss_pred cHHHHHH--HHhCCceEEeeCCeEE
Q 014177 213 TILATSF--LLLGEEVVAYNKGEEI 235 (429)
Q Consensus 213 ~~~~~~~--~~~~~~~~v~~~G~~~ 235 (429)
..+.... ...+.++.++.+|.++
T Consensus 238 ~~i~~~~~~~~~~~~~~i~g~~~~~ 262 (393)
T d1i24a_ 238 TALNRFCVQAAVGHPLTVYGKGGQT 262 (393)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCE
T ss_pred cchhhhhHHhhcCCeeEEeeecccc
Confidence 1222222 2467899999888754
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.59 E-value=4.1e-15 Score=143.27 Aligned_cols=189 Identities=18% Similarity=0.132 Sum_probs=135.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----hhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhcC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----EKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~~ 108 (429)
+++|+||||||+||||+++++.|.++ |++|+++||.. .....+..... .+++++.+|+.|...+.....+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~ 91 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG 91 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc
Confidence 56789999999999999999999997 89999998622 22222222111 4688999999999998888889
Q ss_pred ccEEEecCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCC
Q 014177 109 VDLVVHAAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 109 ~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~ 171 (429)
++.|+|+++.... .++.+++++|.+.+++ +|.+|+...|..... +.+|. .+. ....
T Consensus 92 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~--~p~~ 164 (341)
T d1sb8a_ 92 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIG--KPLS 164 (341)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCC--CCCS
T ss_pred ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCC-----CCC--CCCC
Confidence 9999999865321 3578899999999984 556665555432111 22221 111 2235
Q ss_pred ccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC----ccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 172 YPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG----PTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g----~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
.||.+|+.++.+++.+.+..+.+...+|+ .+.+|++..+ ..++...+. ..++++.++.+|+..
T Consensus 165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~-~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~ 233 (341)
T d1sb8a_ 165 PYAVTKYVNELYADVFSRCYGFSTIGLRY-FNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS 233 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCEEEEE-CCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCeEEEEe-ceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEE
Confidence 69999999999999998888889999998 5677876432 224433332 347889999888765
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.58 E-value=9e-16 Score=146.88 Aligned_cols=186 Identities=19% Similarity=0.233 Sum_probs=130.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCc------eEEEEecCc--hhHHHHHHH-hCCCcEEEEeeCCChHHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDL------QIVVGSRNR--EKGAAMVST-LGKNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~------~v~v~~R~~--~~~~~l~~~-l~~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
||||||||+||||+++++.|+++ ++ +++..|+-. .+...+... ...+++++..|..+...+.....++|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~--g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAG--AYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--SCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccc
Confidence 68999999999999999999997 44 455554321 111111111 12468999999999998888888999
Q ss_pred EEEecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCcc
Q 014177 111 LVVHAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYP 173 (429)
Q Consensus 111 vVi~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~p 173 (429)
+|+|+|+.... .++.+++++|.+.++.. |.+|+...|.... .+++|. .+. ..-..|
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~-----~~~--~p~~~Y 151 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPL--EPNSPY 151 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCC--CCCSHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCC-----CCC--CCCCHH
Confidence 99999975421 24678999999999864 5555544442211 122221 111 122459
Q ss_pred chhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccHHHHHHH--HhCCceEEeeCCeEE
Q 014177 174 GVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
|.+|..++.+++.+.++++.++..+|+ .++|||++....++...+. ..++++.++.+|+++
T Consensus 152 ~~sK~~~E~~~~~~~~~~~~~~~~lR~-~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~ 214 (322)
T d1r6da_ 152 AASKAGSDLVARAYHRTYGLDVRITRC-CNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANV 214 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEE-CEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEe-eeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeE
Confidence 999999999999999888999999999 6789998766556654443 356788888888755
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.58 E-value=1.4e-15 Score=147.80 Aligned_cols=190 Identities=16% Similarity=0.125 Sum_probs=128.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
++||||||||+||||+++++.|+++ |++|++.++....-. .... ...++..+|+.|.+.+.++++++|.|||+|+
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~--~~~~-~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~ 88 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHM--TEDM-FCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 88 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSS--CGGG-TCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccch--hhhc-ccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence 4688999999999999999999998 899999987543211 0111 3468899999999999999999999999996
Q ss_pred CCCC----------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHH-hhHHHH--HHcCCcEEecCCCccchhH
Q 014177 118 PFQQ----------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAK-SFKDRA--IAANIPAITTGGIYPGVSN 177 (429)
Q Consensus 118 p~~~----------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~-~~~~~a--~~~g~~~i~~~g~~pG~s~ 177 (429)
.... .++.+++++|.+.+++. |.+|+...+..... ...+.. .....+. ..-..||.||
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~--~p~~~Yg~sK 166 (363)
T d2c5aa1 89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA--EPQDAFGLEK 166 (363)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB--CCSSHHHHHH
T ss_pred ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcC--CCCCHHHHHH
Confidence 5432 24678899999999875 55555443321110 000000 0000111 1224599999
Q ss_pred HHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCc----cHHHH---HHHHhCCceEEeeCCeEE
Q 014177 178 VMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP----TILAT---SFLLLGEEVVAYNKGEEI 235 (429)
Q Consensus 178 ~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~----~~~~~---~~~~~~~~~~v~~~G~~~ 235 (429)
+.++.+++.+.++++.+...+|+ ++++|+.+... ..... .......+...+.+|...
T Consensus 167 ~~~E~~~~~~~~~~gl~~~ilR~-~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 230 (363)
T d2c5aa1 167 LATEELCKHYNKDFGIECRIGRF-HNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQT 230 (363)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEE-CCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCE
T ss_pred HHHHHHHHHHHHHhCCCEEEEEe-eeEeccCCcccccccccccccccccccccccccccCCCCeE
Confidence 99999999998888888999998 67898865321 11111 122445667777777654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=1.2e-15 Score=147.07 Aligned_cols=192 Identities=12% Similarity=0.144 Sum_probs=129.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH-HhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM-ALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~-~~~~~DvVi~~agp 118 (429)
||||||||+||||+++++.|++++ .++|++.++...+...+.+ ..+++++++|+++.+++.+ +.+++|+|||+|+.
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g-~~~V~~ld~~~~~~~~~~~--~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~ 77 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 77 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeCCCcchhhhcc--CCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence 589999999999999999999872 3689999886655443322 1478999999988765544 66789999999986
Q ss_pred CCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 119 FQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 119 ~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
... .++.+++++|.+.+++.+..++...|..... ...+........-.......||.||.+++.
T Consensus 78 ~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~ 157 (342)
T d2blla1 78 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR 157 (342)
T ss_dssp CCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHH
T ss_pred ccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchhh
Confidence 432 2468899999999999887776655432111 111100000000000112459999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeeecCCCCCC-------cc-HHHHHHH--HhCCceEEeeCCeEE
Q 014177 183 LVRVARNESKGEPERLRFSYYTAGTGGAG-------PT-ILATSFL--LLGEEVVAYNKGEEI 235 (429)
Q Consensus 183 ~~~~~~~~~~~~v~~i~~~~~~~G~~~~g-------~~-~~~~~~~--~~~~~~~v~~~G~~~ 235 (429)
++..+.++++.+...+|. ...+|+.... .. .+...+. ..++++.++.+|+..
T Consensus 158 ~~~~~~~~~~~~~~i~r~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 219 (342)
T d2blla1 158 VIWAYGEKEGLQFTLFRP-FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK 219 (342)
T ss_dssp HHHHHHHHHCCCEEEEEE-CSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE
T ss_pred hhhhhhcccCceeEEeec-cccccccccccccccccccccchHHHHHHHhCCCccccCCCCee
Confidence 999998888888889988 5567765321 11 2222222 346788888888754
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=3.5e-15 Score=143.74 Aligned_cols=185 Identities=12% Similarity=0.078 Sum_probs=125.4
Q ss_pred CeE-EEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-----hHHHH----HHHhCCCcEEEEeeCCChHHHHHHhc--
Q 014177 40 ARV-LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-----KGAAM----VSTLGKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 40 ~~V-lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-----~~~~l----~~~l~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
||| |||||+||||+++++.|+++ |++|+.++|... +++.+ ......+++++++|++|.+.+..++.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence 578 99999999999999999997 899999998543 22211 11222468899999999999998886
Q ss_pred CccEEEecCCCCCC---------------CchHHHHHHHHHcCC----cEEEeCCChhHHHH-HHhhHHHHHHcCCcEEe
Q 014177 108 DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKT----AYIDVCDDTIYSQR-AKSFKDRAIAANIPAIT 167 (429)
Q Consensus 108 ~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv----~~vdis~~~~~~~~-~~~~~~~a~~~g~~~i~ 167 (429)
++++|+|+++.... .++.+++++|.+.++ ++|.+|+...|... ..+++|. .+.
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~-- 151 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPF-- 151 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCC--
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC-----CCC--
Confidence 67899999875421 256788999999876 36777765554211 0122221 111
Q ss_pred cCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCCccH---HHHHH-H--HhCCceEEeeCCeE
Q 014177 168 TGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTI---LATSF-L--LLGEEVVAYNKGEE 234 (429)
Q Consensus 168 ~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g~~~---~~~~~-~--~~~~~~~v~~~G~~ 234 (429)
..-+.||.||+.++.++..+.++++.+...+|+ +++|||....... +...+ . ....+...+.+|..
T Consensus 152 ~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~-~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~ 223 (347)
T d1t2aa_ 152 YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGIL-FNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDA 223 (347)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEe-cceeCCCCCCCccccccceeeehhhcCCcceeecCCCcc
Confidence 223569999999999999988888888888998 6789986432221 11111 1 23455666667654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.51 E-value=1.8e-14 Score=139.14 Aligned_cols=160 Identities=20% Similarity=0.249 Sum_probs=112.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc----hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR----EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~----~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
|.||||||+||||+++++.|+++ +++|+++++.. +...........+++++++|++|.+.++++++ ++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 56999999999999999999997 79999988522 12222233334578999999999999999887 899999
Q ss_pred ecCCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHH-----hhHHHHHHcCCcEEecCCCc
Q 014177 114 HAAGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAK-----SFKDRAIAANIPAITTGGIY 172 (429)
Q Consensus 114 ~~agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~-----~~~~~a~~~g~~~i~~~g~~ 172 (429)
|+|+.... .++.+++++|.+.+++. +.+++...|..... .+.+. .+. ..-..
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~-----~~~--~p~~~ 152 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPL--GPTNP 152 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCC--CCCSH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccc-----cCC--CCCCh
Confidence 99986431 24678899999999864 55555444432111 11111 111 11245
Q ss_pred cchhHHHHHHHHHHHHhh--cCCCCeEEEEEeeecCCCC
Q 014177 173 PGVSNVMAAELVRVARNE--SKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~--~~~~v~~i~~~~~~~G~~~ 209 (429)
||.||.+++.++..+.+. ...+...+|+ ++++|+.+
T Consensus 153 Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~-~~v~g~~~ 190 (347)
T d1z45a2 153 YGHTKYAIENILNDLYNSDKKSWKFAILRY-FNPIGAHP 190 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCEEEEEEE-CEEECCCT
T ss_pred hHhHHHHHHHHHHHHHHhhccCCcEEEEee-cceEeecC
Confidence 999999999999888653 4455677887 56677543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.51 E-value=1.4e-14 Score=139.01 Aligned_cols=162 Identities=12% Similarity=0.024 Sum_probs=110.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-----hHHHHHH---Hh-CCCcEEEEeeCCChHHHHHHhc--
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-----KGAAMVS---TL-GKNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-----~~~~l~~---~l-~~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
+|++|||||+||||+++++.|+++ |++|++++|... +.+.+.. .. ...+++..+|+++.+.+.+.++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 78 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 78 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence 478999999999999999999998 899999998532 2222111 11 1357889999999999988876
Q ss_pred CccEEEecCCCCCC---------------CchHHHHHHHHHcCC------cEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 108 DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKT------AYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 108 ~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv------~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
++|+|||+|+.... .++.+++++|.+.+. ..+..++...+........|. .+.
T Consensus 79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~-----~~~- 152 (339)
T d1n7ha_ 79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET-----TPF- 152 (339)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT-----SCC-
T ss_pred ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCC-----CCC-
Confidence 78999999986432 134566677654322 233333222221111122221 111
Q ss_pred ecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 167 TTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 167 ~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
..-..||.+|+.++.++..+.+.++.++..+|+ +++|||...
T Consensus 153 -~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~-~~vyGp~~~ 194 (339)
T d1n7ha_ 153 -HPRSPYAASKCAAHWYTVNYREAYGLFACNGIL-FNHESPRRG 194 (339)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEECTTSC
T ss_pred -CCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEE-ccccCCCCC
Confidence 223559999999999999999888888999998 788998643
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=4.7e-14 Score=134.22 Aligned_cols=162 Identities=12% Similarity=-0.014 Sum_probs=115.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh--HHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--CccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK--GAAMVSTL-GKNSEFAEVNIYNEGSLLMALR--DVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~--~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~ 114 (429)
|+||||||+||||+++++.|+++ |++|+.++|.... ...+.... .++++++++|++|.+.+.+.+. ..++++|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 78 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 78 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence 68999999999999999999997 8999999986532 22222211 1468999999999999888776 5788999
Q ss_pred cCCCCCC---------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHHH--hhHHHHHHcCCcEEecCCCccchh
Q 014177 115 AAGPFQQ---------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRAK--SFKDRAIAANIPAITTGGIYPGVS 176 (429)
Q Consensus 115 ~agp~~~---------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~~--~~~~~a~~~g~~~i~~~g~~pG~s 176 (429)
+++.... .++.+++++|.+.++. .+..+++..++.... ..+|. .+. ..-..||.+
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~-----~~~--~p~~~Y~~s 151 (321)
T d1rpna_ 79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPF--YPRSPYGVA 151 (321)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCC--CCCSHHHHH
T ss_pred ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCC-----CCc--cccChhHHH
Confidence 8864321 2467889999998865 343343433332111 12111 111 122559999
Q ss_pred HHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC
Q 014177 177 NVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g 211 (429)
|++++.++..+.++++.++..+|+ ++.+||....
T Consensus 152 K~~~E~~~~~~~~~~~~~~~~lr~-~~vyGp~~~~ 185 (321)
T d1rpna_ 152 KLYGHWITVNYRESFGLHASSGIL-FNHESPLRGI 185 (321)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEE-CCEECTTSCT
T ss_pred HHHHHHHHHHHHhhcCCcEEEEEE-ecccCCCccc
Confidence 999999999999888889999998 7889986443
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=3.5e-14 Score=126.96 Aligned_cols=102 Identities=11% Similarity=0.130 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|.||||+|+||+|++|+++++.|+++ |++|++..|++++++.. ...+++++++|++|.+++.++++++|+|||++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~~~~~---~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~ 75 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhhcccc---cccccccccccccchhhHHHHhcCCCEEEEEe
Confidence 56899999999999999999999997 89999999998875432 22468999999999999999999999999999
Q ss_pred CCCCC--------CchHHHHHHHHHcCCcEE-EeCC
Q 014177 117 GPFQQ--------APKCTVLEAAIETKTAYI-DVCD 143 (429)
Q Consensus 117 gp~~~--------~~~~~v~~aa~~~gv~~v-dis~ 143 (429)
|+... .+..++++++.+++++.+ .+++
T Consensus 76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 86432 134688999999998764 4444
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.47 E-value=4.6e-14 Score=134.00 Aligned_cols=150 Identities=14% Similarity=0.149 Sum_probs=109.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
+||||||||+||||++|++.|+++ ++.+++.++.. .+|+.|.+.+.++++ ++|.|+|+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~-----------------~~~~~~~~~~~~~~~~~~~d~v~~~a 62 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRD-----------------ELNLLDSRAVHDFFASERIDQVYLAA 62 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTT-----------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCch-----------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence 479999999999999999999997 77777665432 158899998888876 689999999
Q ss_pred CCCCC----------------CchHHHHHHHHHcCCc-EEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHH
Q 014177 117 GPFQQ----------------APKCTVLEAAIETKTA-YIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNV 178 (429)
Q Consensus 117 gp~~~----------------~~~~~v~~aa~~~gv~-~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~ 178 (429)
+.... .++.+++++|.+.++. +|.+|+...|.... .+++|.....+.+. ...+.||.||+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~--~~~~~Y~~sK~ 140 (315)
T d1e6ua_ 63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE--PTNEPYAIAKI 140 (315)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC--GGGHHHHHHHH
T ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCC--CCCCHHHHHHH
Confidence 65432 2467899999999986 56777665553211 12222211111111 11245999999
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 179 MAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 179 ~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
.++.++..|.++++.++..+|+ .+++||++.
T Consensus 141 ~~E~~~~~~~~~~gl~~~ilR~-~~vyGp~~~ 171 (315)
T d1e6ua_ 141 AGIKLCESYNRQYGRDYRSVMP-TNLYGPHDN 171 (315)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEE-CEEESTTCC
T ss_pred HHHHHHHHHHHHhCCCEEEEee-ccEECCCCC
Confidence 9999999999888889999998 678998754
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.46 E-value=6.1e-14 Score=137.17 Aligned_cols=168 Identities=19% Similarity=0.217 Sum_probs=115.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec---------CchhHHHHHHHh-----------CCCcEEEEeeCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR---------NREKGAAMVSTL-----------GKNSEFAEVNIYN 98 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R---------~~~~~~~l~~~l-----------~~~v~~~~~Dl~d 98 (429)
.||||||||+||||+++++.|++. .+++|+++|+ ..+..+.....+ ...+.++++|++|
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~-~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHh-CCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence 369999999999999999999874 3789999874 112222221111 1357889999999
Q ss_pred hHHHHHHhc---CccEEEecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHH
Q 014177 99 EGSLLMALR---DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIA 160 (429)
Q Consensus 99 ~~~l~~~~~---~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~ 160 (429)
.+.++++++ ++|+|||+|++... .++.+++++|.+.+++.+...++...+... ...... .
T Consensus 81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~-~ 158 (383)
T d1gy8a_ 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNP-TMGSVS-T 158 (383)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSC-CC------
T ss_pred HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccc-cccccc-c
Confidence 999988876 67999999986432 246788999999998876544333222110 000000 0
Q ss_pred cCCcE----EecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 161 ANIPA----ITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 161 ~g~~~----i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
...+. ....-..||.+|+.++.+++.+.+.++.+...+|+ ++.||++..
T Consensus 159 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~-~~vyG~~~~ 211 (383)
T d1gy8a_ 159 NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRY-FNACGAHED 211 (383)
T ss_dssp CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CEEECCCTT
T ss_pred cccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEec-ceeeccCcc
Confidence 00000 01123559999999999999998888999999998 678998754
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=9e-14 Score=133.90 Aligned_cols=163 Identities=21% Similarity=0.243 Sum_probs=112.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC----------chhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN----------REKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~----------~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
.||||||||+||||+++++.|+++ |++|+++|+. .+..+.+......++.++++|++|.+.+.+++.
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 79 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc
Confidence 479999999999999999999997 7899998741 123333333334679999999999999998876
Q ss_pred -CccEEEecCCCCCC---------------CchHHHHHHHHHcCCcEE-EeCCChhHHHHHHhhHHHHHHcCCcEEecCC
Q 014177 108 -DVDLVVHAAGPFQQ---------------APKCTVLEAAIETKTAYI-DVCDDTIYSQRAKSFKDRAIAANIPAITTGG 170 (429)
Q Consensus 108 -~~DvVi~~agp~~~---------------~~~~~v~~aa~~~gv~~v-dis~~~~~~~~~~~~~~~a~~~g~~~i~~~g 170 (429)
++++++|+|+.... .++.+++++|.+.+++.+ .++++..+........+. ........
T Consensus 80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~-----~~~~~~~~ 154 (346)
T d1ek6a_ 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDE-----AHPTGGCT 154 (346)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCT-----TSCCCCCS
T ss_pred cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccc-----cccccccC
Confidence 56789999985431 246789999999998765 444333332211110000 01111223
Q ss_pred CccchhHHHHHHHHHHHHhh-cCCCCeEEEEEeeecCCCC
Q 014177 171 IYPGVSNVMAAELVRVARNE-SKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~-~~~~v~~i~~~~~~~G~~~ 209 (429)
+.||.+|+.++..+..+.+. .+.....+|+ ++.+|+..
T Consensus 155 ~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~-~~v~G~~~ 193 (346)
T d1ek6a_ 155 NPYGKSKFFIEEMIRDLCQADKTWNAVLLRY-FNPTGAHA 193 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEE-CEEECCCT
T ss_pred ChHHHHHHHHHHHHHHHHHhccCCceEEEee-cceeccCC
Confidence 45999999999998876653 4666778887 67888753
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.44 E-value=2.7e-13 Score=129.22 Aligned_cols=192 Identities=14% Similarity=0.063 Sum_probs=120.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC--chhHHHHHHHh-CCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN--REKGAAMVSTL-GKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~--~~~~~~l~~~l-~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
|||||||+||||+++++.|+++ |++|++.|+- ..+.+.+.... ..+++++++|++|.+++.++++ ++|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 7999999999999999999998 8999998742 22222222111 2578999999999999999987 46999999
Q ss_pred CCCCCC---------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhh--HHH---------HHHcCCcEEec
Q 014177 116 AGPFQQ---------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSF--KDR---------AIAANIPAITT 168 (429)
Q Consensus 116 agp~~~---------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~--~~~---------a~~~g~~~i~~ 168 (429)
|++... .++.+++++|.+.++.. +..++...++...... ... ...........
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 159 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence 986542 25678999999998864 4444433332211000 000 00000000001
Q ss_pred CCCccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCCCC---ccHHHHHHH-------HhCCceEEeeCCeEE
Q 014177 169 GGIYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG---PTILATSFL-------LLGEEVVAYNKGEEI 235 (429)
Q Consensus 169 ~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~g---~~~~~~~~~-------~~~~~~~v~~~G~~~ 235 (429)
....||.++...+.++..+.+.+......++. ++.+++...+ ...+...+. ..++++.++++|..+
T Consensus 160 ~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 235 (338)
T d1orra_ 160 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRH-SSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 235 (338)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE
T ss_pred cccccccccchhhhhhhhhhhccCcccccccc-cceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCcee
Confidence 12348899999999988877777766666666 4555544332 223222221 235678888887644
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.41 E-value=9.9e-14 Score=133.78 Aligned_cols=167 Identities=19% Similarity=0.100 Sum_probs=113.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc--Ccc
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~--~~D 110 (429)
+.+++||||||||+||||+++++.|++. |++|++.+|+..+...+.+.. .++++++++|++|.+.+.++++ .+|
T Consensus 4 ~~~~~KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~ 81 (356)
T d1rkxa_ 4 SFWQGKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPE 81 (356)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred hhhCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhh
Confidence 3478899999999999999999999998 899999999876544443332 2579999999999999988887 679
Q ss_pred EEEecCCCCCC---------------CchHHHHHHHHHcCCcEEEeCCCh-hHHHHHH---hhHHHHHHcCCcEEecCCC
Q 014177 111 LVVHAAGPFQQ---------------APKCTVLEAAIETKTAYIDVCDDT-IYSQRAK---SFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 111 vVi~~agp~~~---------------~~~~~v~~aa~~~gv~~vdis~~~-~~~~~~~---~~~~~a~~~g~~~i~~~g~ 171 (429)
+|+|+++.... .++.+++++|.+.+...+.+.++. ..+.... ...+ ..+. ..-.
T Consensus 82 ~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-----~~~~--~p~~ 154 (356)
T d1rkxa_ 82 IVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRE-----NEAM--GGYD 154 (356)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCT-----TSCB--CCSS
T ss_pred hhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccc-----cccc--CCCC
Confidence 99999976432 235788999988876554433222 2111000 0000 0010 0112
Q ss_pred ccchhHHHHHHHHHHHHhhcC---------CCCeEEEEEeeecCCCCCC
Q 014177 172 YPGVSNVMAAELVRVARNESK---------GEPERLRFSYYTAGTGGAG 211 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~---------~~v~~i~~~~~~~G~~~~g 211 (429)
.||.+|...+..+..+..++. ..+..++. .+++|+++.+
T Consensus 155 ~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~vyGp~~~~ 202 (356)
T d1rkxa_ 155 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRA-GNVIGGGDWA 202 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEEC-CCEECTTCCC
T ss_pred ccccccccchhhhhHHhhhcccchhccccCceEEeccC-CCeeCCCcch
Confidence 378899999888877665433 33445555 5678888654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.38 E-value=4.5e-13 Score=128.94 Aligned_cols=167 Identities=17% Similarity=0.066 Sum_probs=110.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CC-cEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KN-SEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~-v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+|+||||||+||||+++++.|+++ |++|++..|+.++...+..... .+ ...+..|+.|.+++.++++++|.|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred cCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 689999999999999999999997 8999999999877666543221 22 3446689999999999999999999
Q ss_pred ecCCCCCC------------CchHHHHHHHHHc-CCcEEEeCCCh-hHHH-H--------------HHhhHHHHHHcCCc
Q 014177 114 HAAGPFQQ------------APKCTVLEAAIET-KTAYIDVCDDT-IYSQ-R--------------AKSFKDRAIAANIP 164 (429)
Q Consensus 114 ~~agp~~~------------~~~~~v~~aa~~~-gv~~vdis~~~-~~~~-~--------------~~~~~~~a~~~g~~ 164 (429)
|++++... .++.+++++|.+. +++.+...++. ..+. . ...+... ....-.
T Consensus 89 ~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~e~ 167 (342)
T d1y1pa1 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKA-KTLPES 167 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHH-HHSCTT
T ss_pred hhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccc-cccccc
Confidence 99976442 2467889999887 56665443332 1100 0 0001110 000000
Q ss_pred EEecCCCccchhHHHHHHHHHHHHhhcCCCCeEEEEE-eeecCCC
Q 014177 165 AITTGGIYPGVSNVMAAELVRVARNESKGEPERLRFS-YYTAGTG 208 (429)
Q Consensus 165 ~i~~~g~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~-~~~~G~~ 208 (429)
......+.||.||..++.++..|.+++......+.+. .+++|+.
T Consensus 168 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~ 212 (342)
T d1y1pa1 168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTI 212 (342)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCC
T ss_pred CCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCC
Confidence 0011124599999999999998887766655443321 2456764
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.37 E-value=6.5e-13 Score=122.83 Aligned_cols=83 Identities=17% Similarity=0.294 Sum_probs=76.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||++.||+++++.|+++ |++|++.+|+.++++++.++++.++..+++|++|+++++++++ +
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 79 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVRE--GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGS 79 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 478899999999999999999999998 8999999999999999999998889999999999998888765 7
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|++||+||...
T Consensus 80 iDilVnnAg~~~ 91 (256)
T d1k2wa_ 80 IDILVNNAALFD 91 (256)
T ss_dssp CCEEEECCCCCC
T ss_pred ccEEEeeccccc
Confidence 899999998654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.35 E-value=8.6e-13 Score=121.06 Aligned_cols=149 Identities=15% Similarity=0.147 Sum_probs=102.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
.+++|+++||||++.||+++++.|++. |++|++.+|+.++++++.++++++..++++|++|+++++++++ +
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG 80 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999998 8999999999999999999887778899999999998887765 6
Q ss_pred ccEEEecCCCCCCC----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHH-HHcCCcEEecCCC---------ccc
Q 014177 109 VDLVVHAAGPFQQA----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRA-IAANIPAITTGGI---------YPG 174 (429)
Q Consensus 109 ~DvVi~~agp~~~~----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a-~~~g~~~i~~~g~---------~pG 174 (429)
+|++||+||..... -+..-++..++.. -...+.-....+.... ...|..+.+++.. .|+
T Consensus 81 idilinnAG~~~~~~~~~~~~~~~~~~~~vN-------l~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~ 153 (244)
T d1nffa_ 81 LHVLVNNAGILNIGTIEDYALTEWQRILDVN-------LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYT 153 (244)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred CeEEEECCcccCCCchhhCCHHHHhHHhhcc-------cchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchh
Confidence 89999999865421 0122233332221 1111221111111111 2234344433211 278
Q ss_pred hhHHHHHHHHHHHHhhcCC
Q 014177 175 VSNVMAAELVRVARNESKG 193 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~ 193 (429)
.+|.....+.+.+..++..
T Consensus 154 asKaal~~ltk~lA~el~~ 172 (244)
T d1nffa_ 154 ATKFAVRGLTKSTALELGP 172 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGG
T ss_pred hHHHHHHHHHHHHHHHhcc
Confidence 8898888888888776553
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.34 E-value=1.6e-12 Score=119.13 Aligned_cols=82 Identities=23% Similarity=0.199 Sum_probs=74.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
++++|++|||||++.||+++++.|++. |++|++.+|+.++++++.+++. ++..+.+|++|.++++++++ ++|++
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~g~iDil 78 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDATEKALGGIGPVDLL 78 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence 578999999999999999999999997 8999999999999999988875 68899999999999998887 68999
Q ss_pred EecCCCCC
Q 014177 113 VHAAGPFQ 120 (429)
Q Consensus 113 i~~agp~~ 120 (429)
|||||...
T Consensus 79 VnnAg~~~ 86 (242)
T d1cyda_ 79 VNNAALVI 86 (242)
T ss_dssp EECCCCCC
T ss_pred EECCcccc
Confidence 99998643
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.34 E-value=9.4e-13 Score=121.53 Aligned_cols=149 Identities=16% Similarity=0.166 Sum_probs=102.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||++.||+++++.|+++ |++|++.+|+.++++++.++++.++.++++|++|.++++++++ +
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999997 8999999999999999998887778999999999998888765 7
Q ss_pred ccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHH-HHHHcCCcEEecCC---------Cccc
Q 014177 109 VDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKD-RAIAANIPAITTGG---------IYPG 174 (429)
Q Consensus 109 ~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~-~a~~~g~~~i~~~g---------~~pG 174 (429)
+|++||+||...... +..-++..++. +-...+.-....+.. .....|..+.+++. ..|+
T Consensus 80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~v-------N~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~ 152 (254)
T d1hdca_ 80 VDGLVNNAGISTGMFLETESVERFRKVVEI-------NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYG 152 (254)
T ss_dssp CCEEEECCCCCCCSCGGGSCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred ccEEEecCccccccccccccccccchhhhH-------HhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHH
Confidence 999999998654310 12222222221 111122211111111 11223444444321 1278
Q ss_pred hhHHHHHHHHHHHHhhcCC
Q 014177 175 VSNVMAAELVRVARNESKG 193 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~ 193 (429)
.||.....+.+.++.++..
T Consensus 153 asKaal~~lt~~lA~e~a~ 171 (254)
T d1hdca_ 153 ASKWGVRGLSKLAAVELGT 171 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 8898888888888776543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=2.1e-12 Score=118.54 Aligned_cols=82 Identities=27% Similarity=0.207 Sum_probs=74.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLV 112 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvV 112 (429)
.+++|++|||||++.||+++++.|++. |++|++.+|+.++++++.++++ .+..+++|++|.++++++++ ++|++
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~g~iDil 80 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALGSVGPVDLL 80 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence 478899999999999999999999997 8999999999999999988875 58899999999999988876 78999
Q ss_pred EecCCCCC
Q 014177 113 VHAAGPFQ 120 (429)
Q Consensus 113 i~~agp~~ 120 (429)
||+||...
T Consensus 81 VnnAg~~~ 88 (244)
T d1pr9a_ 81 VNNAAVAL 88 (244)
T ss_dssp EECCCCCC
T ss_pred Eecccccc
Confidence 99998654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=7.6e-13 Score=121.39 Aligned_cols=83 Identities=22% Similarity=0.304 Sum_probs=75.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||++.||+++++.|++. |++|++.+|+.++++++.++++.+...+++|++|.++++++++ +
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGE 78 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence 478899999999999999999999997 8999999999999999998887778899999999998887765 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|++||+||...
T Consensus 79 iDilVnnAg~~~ 90 (243)
T d1q7ba_ 79 VDILVNNAGITR 90 (243)
T ss_dssp CSEEEECCCCCC
T ss_pred cceehhhhhhcc
Confidence 999999998654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.32 E-value=9.9e-13 Score=120.55 Aligned_cols=81 Identities=17% Similarity=0.216 Sum_probs=72.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||++.||+++++.|++. |++|++.+|+.++++++.+++ +...+++|++|+++++++++ +
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~~l~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAV--GAHPVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTT--TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 478899999999999999999999998 899999999999999888776 46789999999999888765 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|++|||||...
T Consensus 78 iDilVnnAG~~~ 89 (242)
T d1ulsa_ 78 LDGVVHYAGITR 89 (242)
T ss_dssp CCEEEECCCCCC
T ss_pred ceEEEECCcccc
Confidence 899999998653
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=1.4e-12 Score=118.54 Aligned_cols=147 Identities=12% Similarity=-0.035 Sum_probs=104.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|++++|||||||||+|+++++.|++++.-.+|++.+|++.+.... ...+++...+|+.+.+++.+.++++|+||||+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~ 88 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCL 88 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---GGGGCEEEECCGGGGGGGGGGGSSCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---ccceeeeeeecccccccccccccccccccccc
Confidence 567899999999999999999999984324899999976543221 11357888899999999999999999999999
Q ss_pred CCCCC------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 117 GPFQQ------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 117 gp~~~------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
|.... .++.+++++|.+.+++. +.+|+...+ ......|+-+|..++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~-------------------~~~~~~Y~~~K~~~E~~ 149 (232)
T d2bkaa1 89 GTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD-------------------KSSNFLYLQVKGEVEAK 149 (232)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-------------------TTCSSHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhcccccceeeecccccCccccccCCccccc-------------------cCccchhHHHHHHhhhc
Confidence 85421 13467888999999874 555544321 00113478889888887
Q ss_pred HHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 184 VRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 184 ~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
+..+ .+..+..+|.. ..+|++.
T Consensus 150 l~~~---~~~~~~IlRP~-~i~G~~~ 171 (232)
T d2bkaa1 150 VEEL---KFDRYSVFRPG-VLLCDRQ 171 (232)
T ss_dssp HHTT---CCSEEEEEECC-EEECTTG
T ss_pred cccc---cccceEEecCc-eeecCCC
Confidence 7632 12346677864 3467654
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.30 E-value=2.5e-12 Score=118.31 Aligned_cols=148 Identities=13% Similarity=0.139 Sum_probs=101.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
.+++|+++||||++.||+++++.|++. |++|++.+|+.++++++.++++ ++.++++|++|.++++++++ +
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGR 79 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcC-CCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999997 8999999999999999988875 67899999999998888765 6
Q ss_pred ccEEEecCCCCCCCc-----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------Cccc
Q 014177 109 VDLVVHAAGPFQQAP-----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG---------IYPG 174 (429)
Q Consensus 109 ~DvVi~~agp~~~~~-----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g---------~~pG 174 (429)
+|++||+||.....+ +..-++..++.. -...+......+....+..|..+.+++. ..|+
T Consensus 80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vN-------l~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~ 152 (250)
T d1ydea1 80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELN-------LLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYV 152 (250)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHH
T ss_pred CCEEEecccccccccccccccHHHHHHHHHHh-------hhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhH
Confidence 899999998543211 122233333221 1111211111111222334554444321 2388
Q ss_pred hhHHHHHHHHHHHHhhcCC
Q 014177 175 VSNVMAAELVRVARNESKG 193 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~ 193 (429)
.+|.....+.+.+..++..
T Consensus 153 asKaal~~lt~~lA~e~a~ 171 (250)
T d1ydea1 153 ATKGAVTAMTKALALDESP 171 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGG
T ss_pred HHHhhHHHHHHHHHHHhcc
Confidence 8888888888877766543
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.28 E-value=3.1e-11 Score=112.53 Aligned_cols=149 Identities=13% Similarity=0.088 Sum_probs=103.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||++.||+++++.|+++ |++|++.+|+.++++++.++++.++..+++|++|.++++++++ +
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGK 79 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence 578899999999999999999999998 8999999999999999988887788999999999998877764 7
Q ss_pred ccEEEecCCCCCCCc---------hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC--------
Q 014177 109 VDLVVHAAGPFQQAP---------KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI-------- 171 (429)
Q Consensus 109 ~DvVi~~agp~~~~~---------~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~-------- 171 (429)
+|++||+||...... ....++..++. +-...+......+....++.|..+++.+..
T Consensus 80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~v-------Nl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~ 152 (276)
T d1bdba_ 80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHI-------NVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGG 152 (276)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSC
T ss_pred cccccccccccCCCCccccccccchhhhhhHHHHH-------hhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCC
Confidence 899999998543210 01122322222 111122211111222223345444443211
Q ss_pred -ccchhHHHHHHHHHHHHhhcCC
Q 014177 172 -YPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 172 -~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|+.+|.....+.+.++.++..
T Consensus 153 ~~Y~asKaal~~ltr~lA~ela~ 175 (276)
T d1bdba_ 153 PLYTAAKHAIVGLVRELAFELAP 175 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHhhc
Confidence 2788998888888888877753
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=3.9e-12 Score=116.63 Aligned_cols=84 Identities=20% Similarity=0.225 Sum_probs=74.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++.+|.++||||++.||+++++.|+++ |++|++.+|+.++++++++++. .++..+.+|++|.++++++++
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 80 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 80 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 5688999999999999999999999998 8999999999999998877653 468899999999998887765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++|||||...
T Consensus 81 ~~g~idilinnag~~~ 96 (244)
T d1yb1a_ 81 EIGDVSILVNNAGVVY 96 (244)
T ss_dssp HTCCCSEEEECCCCCC
T ss_pred HcCCCceeEeeccccc
Confidence 6999999998654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.27 E-value=6.6e-13 Score=122.57 Aligned_cols=83 Identities=20% Similarity=0.340 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|+++||||++.||+++++.|++. |++|++.+|+.++++++.++++.+..++++|++|.++++++++ +
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 80 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 378999999999999999999999998 8999999999999999999998788899999999988887765 6
Q ss_pred ccEEEecCCCCC
Q 014177 109 VDLVVHAAGPFQ 120 (429)
Q Consensus 109 ~DvVi~~agp~~ 120 (429)
+|++||+||...
T Consensus 81 iDilVnnAG~~~ 92 (253)
T d1hxha_ 81 LNVLVNNAGILL 92 (253)
T ss_dssp CCEEEECCCCCC
T ss_pred CCeEEecccccC
Confidence 899999998654
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.27 E-value=5.4e-12 Score=115.89 Aligned_cols=149 Identities=12% Similarity=0.123 Sum_probs=98.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
++++|.++||||++.||+++++.|++. |++|++.+|+.. ..+...+..+.++..+++|++|.++++++++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G 79 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG 79 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 588999999999999999999999997 899999999764 3445555666778999999999998888764
Q ss_pred CccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHH-HcCCcEEecCC---------Ccc
Q 014177 108 DVDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAI-AANIPAITTGG---------IYP 173 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~-~~g~~~i~~~g---------~~p 173 (429)
++|++||+||...... +..-++..++. +-...+......+....+ ..|..+.+++. ..|
T Consensus 80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~v-------Nl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y 152 (247)
T d2ew8a1 80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEI-------NVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHY 152 (247)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHH
T ss_pred CCCEEEECCCCCCCCChHhCCHHHhhhhhee-------ehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccc
Confidence 7999999998654310 12223333322 111122211111111112 23444443321 127
Q ss_pred chhHHHHHHHHHHHHhhcCC
Q 014177 174 GVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 174 G~s~~~a~~~~~~~~~~~~~ 193 (429)
+.||.....+.+.+..++..
T Consensus 153 ~asKaal~~ltk~lA~ela~ 172 (247)
T d2ew8a1 153 ISTKAANIGFTRALASDLGK 172 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGG
T ss_pred hhhhccHHHHHHHHHHHhcc
Confidence 88898888888887766543
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.27 E-value=4.6e-12 Score=117.26 Aligned_cols=86 Identities=15% Similarity=0.249 Sum_probs=73.9
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc-
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
++.++++|++|||||++.||+++++.|++. |++|++.+|+.+++++..+++ +.++..+++|++|.++++++++
T Consensus 3 ~~m~l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~ 80 (260)
T d1h5qa_ 3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ 80 (260)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence 456789999999999999999999999997 899999999998877665443 4578899999999998888765
Q ss_pred ------CccEEEecCCCCC
Q 014177 108 ------DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ------~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 81 ~~~~~g~iDilVnnAg~~~ 99 (260)
T d1h5qa_ 81 IDADLGPISGLIANAGVSV 99 (260)
T ss_dssp HHHHSCSEEEEEECCCCCC
T ss_pred HHHHhCCCcEecccccccc
Confidence 6999999998543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.26 E-value=5.5e-12 Score=116.74 Aligned_cols=150 Identities=15% Similarity=0.096 Sum_probs=101.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+++|+++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999997 8999999999999888777653 467889999999998887765
Q ss_pred --CccEEEecCCCCCCCc-----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHH-HHHHcCCcEEecC--------C-
Q 014177 108 --DVDLVVHAAGPFQQAP-----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKD-RAIAANIPAITTG--------G- 170 (429)
Q Consensus 108 --~~DvVi~~agp~~~~~-----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~-~a~~~g~~~i~~~--------g- 170 (429)
++|++||+||.....+ +..-++..++.. -...+......+.. ..+..|..+.+++ +
T Consensus 80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vn-------l~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~ 152 (260)
T d1zema1 80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTIN-------VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNM 152 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTB
T ss_pred hCCCCeehhhhccccccCccccccHHHHHhhcccc-------ccccccchhhHHhhhhhhcCCCCCeeechhhccCCcch
Confidence 7999999998543211 122233232221 11112111111111 1223344444432 1
Q ss_pred CccchhHHHHHHHHHHHHhhcCCC
Q 014177 171 IYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
..|+.||.....+.+.+..++...
T Consensus 153 ~~Y~asKaal~~ltk~lA~el~~~ 176 (260)
T d1zema1 153 AAYGTSKGAIIALTETAALDLAPY 176 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhh
Confidence 128889988888888887766543
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.26 E-value=4.2e-12 Score=116.23 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=74.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|+++||||++.||+++++.|+++ |++|++.+|+.+++++..++++.++.++++|++|+++++++++ ++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 78899999999999999999999998 8999999999999999999888888899999999999887765 69
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|++||+||..
T Consensus 81 DiLinnAg~~ 90 (241)
T d2a4ka1 81 HGVAHFAGVA 90 (241)
T ss_dssp CEEEEGGGGT
T ss_pred cEeccccccc
Confidence 9999999754
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.26 E-value=5.2e-12 Score=116.26 Aligned_cols=83 Identities=29% Similarity=0.337 Sum_probs=71.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|+++||||++.||+++++.|+++ |++|++.+|+.+++++..+++ +.++..+++|++|.++++++++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 79 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 378899999999999999999999998 899999999998877665543 4568889999999998888765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 80 ~~g~iDiLVnnAG~~~ 95 (251)
T d1vl8a_ 80 KFGKLDTVVNAAGINR 95 (251)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HcCCCCEEEECCCCCC
Confidence 6999999998543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=4.7e-12 Score=116.89 Aligned_cols=84 Identities=18% Similarity=0.266 Sum_probs=73.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc----
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.++++|+++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|+++++++++
T Consensus 7 m~L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~ 84 (255)
T d1fmca_ 7 LRLDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3468899999999999999999999997 8999999999999888876653 568899999999998877664
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 85 ~~g~iDilvnnAG~~~ 100 (255)
T d1fmca_ 85 KLGKVDILVNNAGGGG 100 (255)
T ss_dssp HHSSCCEEEECCCCCC
T ss_pred HcCCCCEeeeCCcCCC
Confidence 7999999998643
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.25 E-value=1.4e-11 Score=113.85 Aligned_cols=148 Identities=15% Similarity=0.094 Sum_probs=99.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
+++|+++||||++.||+++++.|++. |++|++.+|+.+++++..+++ +.++..+++|++|+++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 79 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 79 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 67899999999999999999999998 899999999999888766554 2367789999999998887764
Q ss_pred ---CccEEEecCCCCCCCc-----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHH-HHHHcCCcEEecCCC-------
Q 014177 108 ---DVDLVVHAAGPFQQAP-----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKD-RAIAANIPAITTGGI------- 171 (429)
Q Consensus 108 ---~~DvVi~~agp~~~~~-----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~-~a~~~g~~~i~~~g~------- 171 (429)
++|++||+||.....+ +..-++..++. +-...+......+.. ..+..|..+.+++..
T Consensus 80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~v-------Nl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~ 152 (258)
T d1iy8a_ 80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSI-------NLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN 152 (258)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS
T ss_pred HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhh-------hccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC
Confidence 7999999998543211 12223333222 211222211111111 223345444444321
Q ss_pred --ccchhHHHHHHHHHHHHhhcCC
Q 014177 172 --YPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 172 --~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|+.||.....+.+.+..++..
T Consensus 153 ~~~Y~asKaal~~lt~~lA~el~~ 176 (258)
T d1iy8a_ 153 QSGYAAAKHGVVGLTRNSAVEYGR 176 (258)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred chHHHHHHHHHHHHHHHHHHHhCc
Confidence 2778898888888887766543
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.24 E-value=2.5e-12 Score=118.46 Aligned_cols=83 Identities=17% Similarity=0.272 Sum_probs=74.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
++++|.++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++.++++|++|.++++++++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 488999999999999999999999998 8999999999999998888775 468899999999998887765
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 81 G~iDiLVnnAg~~~ 94 (251)
T d1zk4a1 81 GPVSTLVNNAGIAV 94 (251)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCceEEEecccccc
Confidence 6899999998654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.24 E-value=7.6e-12 Score=116.27 Aligned_cols=83 Identities=14% Similarity=0.388 Sum_probs=74.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc------
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
.+++|.+|||||++.||+++++.|++. |++|++.+|+.++++++.+++. ..+.++++|++|.++++++++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH 80 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 388999999999999999999999997 8999999999999999988876 357789999999998888775
Q ss_pred -CccEEEecCCCCC
Q 014177 108 -DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 81 g~iD~lVnnAG~~~ 94 (268)
T d2bgka1 81 GKLDIMFGNVGVLS 94 (268)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCcceecccccccc
Confidence 7899999998543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.1e-11 Score=116.97 Aligned_cols=82 Identities=21% Similarity=0.278 Sum_probs=71.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--------CCcEEEEeeCCChHHHHHHhc-
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--------KNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--------~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
+++|.+|||||++.||+++++.|++. |++|++.+|+.+++++.++++. .++..+++|++|.++++++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~ 87 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 87 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence 88999999999999999999999997 8999999999998887766542 367889999999998887765
Q ss_pred ------CccEEEecCCCCC
Q 014177 108 ------DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ------~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 88 ~~~~~G~iDiLVnnAg~~~ 106 (297)
T d1yxma1 88 TLDTFGKINFLVNNGGGQF 106 (297)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHhCCeEEEEeeccccc
Confidence 7899999998543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.23 E-value=7.5e-12 Score=115.74 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=98.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|++|||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999997 8999999999999988877664 457788999999988777653
Q ss_pred ---CccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHH-HHcCCcEEecCCC--------
Q 014177 108 ---DVDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRA-IAANIPAITTGGI-------- 171 (429)
Q Consensus 108 ---~~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a-~~~g~~~i~~~g~-------- 171 (429)
.+|++||+||...... +..-++..++. +-...+......+.... ...|..+.+++..
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~v-------Nl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~ 155 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI-------NFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE 155 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTC
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhc-------ccceeEEEEeeccchhhhhcccccccccccccccccccc
Confidence 4899999998643211 12223322222 11112221111111111 1234344433211
Q ss_pred -ccchhHHHHHHHHHHHHhhcCC
Q 014177 172 -YPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 172 -~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|+.+|.....+.+.+..++..
T Consensus 156 ~~Y~asKaal~~lt~~lA~el~~ 178 (259)
T d2ae2a_ 156 AVYGATKGAMDQLTRCLAFEWAK 178 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGG
T ss_pred cchHHHHHHHHHHHHHHHHHhCc
Confidence 2777888888888888776654
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.23 E-value=8.3e-12 Score=114.90 Aligned_cols=148 Identities=16% Similarity=0.105 Sum_probs=99.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
+.+|.+|||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 85 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 85 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 67899999999999999999999997 8999999999999888877653 468899999999998887765
Q ss_pred -CccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHH-HHcCCcEEecCC---------Cc
Q 014177 108 -DVDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRA-IAANIPAITTGG---------IY 172 (429)
Q Consensus 108 -~~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a-~~~g~~~i~~~g---------~~ 172 (429)
++|++||+||...... +..-++...+. +-...+......+.... ...|..+.+++. ..
T Consensus 86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~v-------Nl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~ 158 (251)
T d2c07a1 86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRT-------NLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQAN 158 (251)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHH
T ss_pred CCceeeeeccccccccccccccHHHHhhhhee-------eehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHH
Confidence 7999999998643210 11223322222 11122221111111111 223433333321 12
Q ss_pred cchhHHHHHHHHHHHHhhcCC
Q 014177 173 PGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~~~~ 193 (429)
|+.||.....+.+.+..++..
T Consensus 159 Y~asKaal~~ltr~lA~el~~ 179 (251)
T d2c07a1 159 YSSSKAGVIGFTKSLAKELAS 179 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 888998888888887766543
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.23 E-value=6.6e-12 Score=115.98 Aligned_cols=151 Identities=14% Similarity=0.071 Sum_probs=100.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
+|.+|||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|.++++++++ +
T Consensus 2 gKValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 578899999999999999999997 8999999999999888777653 468899999999998888765 6
Q ss_pred ccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHH--HHhh-HHHHHHcCCcEEecCC---------Cc
Q 014177 109 VDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQR--AKSF-KDRAIAANIPAITTGG---------IY 172 (429)
Q Consensus 109 ~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~--~~~~-~~~a~~~g~~~i~~~g---------~~ 172 (429)
+|++|||||...... +..-++..++ ++-...++-. ..+. ....+..|..+.+++. ..
T Consensus 80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~-------vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~ 152 (257)
T d2rhca1 80 VDVLVNNAGRPGGGATAELADELWLDVVE-------TNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 152 (257)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHH-------HHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHH
T ss_pred CCEEEecccccCCCChHHcCHHHHHHHHH-------HHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchh
Confidence 899999998643210 1122222222 2211222211 1121 1222223433433321 12
Q ss_pred cchhHHHHHHHHHHHHhhcCCCCeEEEE
Q 014177 173 PGVSNVMAAELVRVARNESKGEPERLRF 200 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~~~~~v~~i~~ 200 (429)
|+.||.....+.+.++.++... .||+
T Consensus 153 Y~asKaal~~ltk~lA~el~~~--gIrV 178 (257)
T d2rhca1 153 YSASKHGVVGFTKALGLELART--GITV 178 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTS--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhhh--CcEE
Confidence 7889998889998888776543 5665
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=3e-12 Score=118.31 Aligned_cols=83 Identities=23% Similarity=0.303 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
++++|.+|||||++.||+++++.|+++ |++|++.+|+.++++++++++. .++..+++|++|+++++++++
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 378999999999999999999999997 8999999999999988877653 357788999999998888765
Q ss_pred ----CccEEEecCCCCC
Q 014177 108 ----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ----~~DvVi~~agp~~ 120 (429)
++|++|||||...
T Consensus 85 ~~~g~iD~lVnnAg~~~ 101 (257)
T d1xg5a_ 85 SQHSGVDICINNAGLAR 101 (257)
T ss_dssp HHHCCCSEEEECCCCCC
T ss_pred HhcCCCCEEEecccccC
Confidence 7999999998653
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.22 E-value=1.7e-11 Score=113.61 Aligned_cols=82 Identities=16% Similarity=0.268 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.+++|.++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 79 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 79 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence 478899999999999999999999998 8999999999999988877652 247889999999998888765
Q ss_pred -----CccEEEecCCCC
Q 014177 108 -----DVDLVVHAAGPF 119 (429)
Q Consensus 108 -----~~DvVi~~agp~ 119 (429)
++|++|||||..
T Consensus 80 ~~~~g~iDilvnnAG~~ 96 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAA 96 (264)
T ss_dssp HHHHSCCCEEEECCC--
T ss_pred HHHhCCCCEeecccccc
Confidence 799999999864
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.21 E-value=1.5e-11 Score=108.38 Aligned_cols=84 Identities=20% Similarity=0.264 Sum_probs=74.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
...++++|+|+||||+|.||+.+++.|+++ |++|++++|+.++++++.+.+. .++....+|+.|.++++++++++|
T Consensus 17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iD 94 (191)
T d1luaa1 17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAH 94 (191)
T ss_dssp TTSCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcC
Confidence 345689999999999999999999999998 8999999999999988877664 245678899999999999999999
Q ss_pred EEEecCCC
Q 014177 111 LVVHAAGP 118 (429)
Q Consensus 111 vVi~~agp 118 (429)
+||||+|.
T Consensus 95 ilin~Ag~ 102 (191)
T d1luaa1 95 FVFTAGAI 102 (191)
T ss_dssp EEEECCCT
T ss_pred eeeecCcc
Confidence 99999975
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.21 E-value=1.4e-11 Score=113.69 Aligned_cols=79 Identities=20% Similarity=0.329 Sum_probs=68.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
|.+|||||++.||+++++.|+++ |++|++.+|+.++++++.+++. .++..+++|++|.++++++++ ++
T Consensus 2 KValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 79 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence 45699999999999999999997 8999999999999888876653 568889999999998888765 79
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|++||+||...
T Consensus 80 DilVnnAG~~~ 90 (255)
T d1gega_ 80 DVIVNNAGVAP 90 (255)
T ss_dssp CEEEECCCCCC
T ss_pred cEEEecccccc
Confidence 99999998543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.21 E-value=1.8e-11 Score=114.64 Aligned_cols=150 Identities=21% Similarity=0.186 Sum_probs=105.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-----HHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-----GAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-----~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
+++||||+||+||||+++++.|+++ |++|++.+|+... .+.+......+++++++|+.|.+.+.+.+++++.+
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~ 79 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVV 79 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchh
Confidence 3578999999999999999999997 7999999997542 22222222356899999999999999999999999
Q ss_pred EecCCCCCC----CchHHHHHHHHHcC-CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 113 VHAAGPFQQ----APKCTVLEAAIETK-TAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 113 i~~agp~~~----~~~~~v~~aa~~~g-v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
++++++... .+..+++++|.+.+ .+++..++..... ........|..++......+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 143 (312)
T d1qyda_ 80 ISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP----------------DIMEHALQPGSITFIDKRKVRRA 143 (312)
T ss_dssp EECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCT----------------TSCCCCCSSTTHHHHHHHHHHHH
T ss_pred hhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccC----------------CCcccccchhhhhhHHHHHHHHh
Confidence 999865432 34577888888876 5556555322110 00112234666666666666666
Q ss_pred HhhcCCCCeEEEEEeeecC
Q 014177 188 RNESKGEPERLRFSYYTAG 206 (429)
Q Consensus 188 ~~~~~~~v~~i~~~~~~~G 206 (429)
.+..+.+...++.. ..+|
T Consensus 144 ~~~~~~~~~i~r~~-~~~g 161 (312)
T d1qyda_ 144 IEAASIPYTYVSSN-MFAG 161 (312)
T ss_dssp HHHTTCCBCEEECC-EEHH
T ss_pred hcccccceEEeccc-eeec
Confidence 66677777777763 3444
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.20 E-value=9e-11 Score=109.11 Aligned_cols=83 Identities=17% Similarity=0.280 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhc--
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALR-- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~-- 107 (429)
.+++|+++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 79 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 79 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence 378899999999999999999999997 8999999999999988877653 247789999999998887765
Q ss_pred -----CccEEEecCCCCC
Q 014177 108 -----DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 -----~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 80 ~~~~g~iDilvnnAG~~~ 97 (272)
T d1xkqa_ 80 LKQFGKIDVLVNNAGAAI 97 (272)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCceEEEeCCcccC
Confidence 6899999998643
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.20 E-value=4.1e-11 Score=107.63 Aligned_cols=78 Identities=19% Similarity=0.204 Sum_probs=65.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.|++||||||+|++|+++++.|++++..+.|+...|++++.+. +..+++++.+|+.|.+.+.++++++|.|||+++
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~ 77 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IGGEADVFIGDITDADSINPAFQGIDALVILTS 77 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----ccCCcEEEEeeeccccccccccccceeeEEEEe
Confidence 3689999999999999999999998434566667788876543 335789999999999999999999999999997
Q ss_pred CC
Q 014177 118 PF 119 (429)
Q Consensus 118 p~ 119 (429)
..
T Consensus 78 ~~ 79 (252)
T d2q46a1 78 AV 79 (252)
T ss_dssp CC
T ss_pred ec
Confidence 53
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.20 E-value=1e-11 Score=114.88 Aligned_cols=83 Identities=17% Similarity=0.331 Sum_probs=69.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-hHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-KGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|.++||||++.||+++++.|++. |++|++.+|+.+ .++.+.+++ +.++..+++|++|.++++++++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 488999999999999999999999997 899999999864 555555543 3467889999999998888765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 82 ~~G~iDiLVnnAG~~~ 97 (261)
T d1geea_ 82 EFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HhCCCCEeeccceecC
Confidence 7899999998654
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.19 E-value=1.3e-11 Score=114.21 Aligned_cols=149 Identities=13% Similarity=0.117 Sum_probs=96.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHH----hCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVST----LGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~----l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|.+|||||++.||+++++.|++. |++|++.+|+. +.++++.++ .+.++.++++|++|.++++++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999998 89999999974 555555443 34578889999999998888775
Q ss_pred ---CccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHH-HcCCcEEecCC---------
Q 014177 108 ---DVDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAI-AANIPAITTGG--------- 170 (429)
Q Consensus 108 ---~~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~-~~g~~~i~~~g--------- 170 (429)
++|++||+||...... +..-++..++. +-...+......+....+ ..|..+.+++.
T Consensus 80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~v-------Nl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~ 152 (260)
T d1x1ta1 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILAL-------NLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK 152 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTC
T ss_pred HhCCCcEEEeecccccCCchhhhhHHhhhhhhhc-------cccccccccchhhhhHhhcCCceEeecccccceeccCCc
Confidence 6999999998654210 12222222222 111112111111111122 23444433321
Q ss_pred CccchhHHHHHHHHHHHHhhcCCC
Q 014177 171 IYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
..|+.||.....+.+.+..++...
T Consensus 153 ~~Y~asKaal~~lt~~lA~el~~~ 176 (260)
T d1x1ta1 153 SAYVAAKHGVVGFTKVTALETAGQ 176 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred chhhhhhhhHHHhHHHHHHHhchh
Confidence 127888988888888887776544
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.19 E-value=1.3e-11 Score=114.17 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=70.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|+++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+.+|++|.++++++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 82 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999997 8999999999999888777653 468899999999988776653
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
.+|++||+||...
T Consensus 83 ~~g~idilvnnAG~~~ 98 (259)
T d1xq1a_ 83 FGGKLDILINNLGAIR 98 (259)
T ss_dssp HTTCCSEEEEECCC--
T ss_pred hCCCcccccccccccC
Confidence 4899999998643
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.19 E-value=1.9e-11 Score=112.95 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
++++|++|||||++.||+++++.|++. |++|++.+|++++++++.+++. ..+.++.+|++|.++++++++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 378999999999999999999999998 8999999999988888776653 457788999999998877654
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
..|++||+||...
T Consensus 81 ~~g~idilinnag~~~ 96 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVI 96 (258)
T ss_dssp TTSCCCEEEECCCCCC
T ss_pred hCCCcEEEeccccccc
Confidence 4899999998654
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.19 E-value=1.8e-11 Score=111.58 Aligned_cols=76 Identities=24% Similarity=0.219 Sum_probs=66.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.++++|++|||||++.||+++++.|++. |++|++.+|+.+++ .++..+++|++|.++++++++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 72 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAP--------KGLFGVEVDVTDSDAVDRAFTAVEEHQG 72 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCC--------TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcchh--------cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence 4589999999999999999999999997 89999999998764 356789999999998887765
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 73 ~iDiLVnnAG~~~ 85 (237)
T d1uzma1 73 PVEVLVSNAGLSA 85 (237)
T ss_dssp SCSEEEEECSCCC
T ss_pred CceEEEeeecccc
Confidence 6899999998653
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.17 E-value=2.5e-11 Score=114.10 Aligned_cols=83 Identities=17% Similarity=0.238 Sum_probs=71.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|++|||||+|.||+++++.|++. |++|++.+|+.+++++..+++ +.++..+++|++|.++++++++
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 99 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 99 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence 588999999999999999999999998 899999999998877666544 4567889999999998877654
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 100 ~~g~iDilvnnAg~~~ 115 (294)
T d1w6ua_ 100 VAGHPNIVINNAAGNF 115 (294)
T ss_dssp HTCSCSEEEECCCCCC
T ss_pred hccccchhhhhhhhcc
Confidence 7999999998654
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.16 E-value=1.8e-11 Score=114.17 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhc---
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
+++|+++||||++.||+++++.|++. |++|++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 79 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence 67899999999999999999999997 8999999999999888877652 247889999999998887765
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 80 ~~~G~iDilVnnAG~~ 95 (274)
T d1xhla_ 80 AKFGKIDILVNNAGAN 95 (274)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCceEEEeecccc
Confidence 689999999854
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.15 E-value=2.6e-11 Score=111.33 Aligned_cols=144 Identities=15% Similarity=0.107 Sum_probs=94.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
+++|++|||||++.||+++++.|+++ |++|++.+|+.++.+ +.+..+ ..++++|++|.++++++++ ++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~-~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 77 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKE-VAEAIG--GAFFQVDLEDERERVRFVEEAAYALGRV 77 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHHH-HHHHHT--CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHH-HHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence 67899999999999999999999998 899999999987654 444443 5778999999988887765 79
Q ss_pred cEEEecCCCCCCC----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHH--cCCcEEecCC---------Cccc
Q 014177 110 DLVVHAAGPFQQA----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIA--ANIPAITTGG---------IYPG 174 (429)
Q Consensus 110 DvVi~~agp~~~~----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~--~g~~~i~~~g---------~~pG 174 (429)
|++||+||..... -+..-++...+.. -...+.- .+......++ .|..+.+++. ..|+
T Consensus 78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vN-------l~g~~~~-~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~ 149 (248)
T d2d1ya1 78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVN-------LTAPMHL-SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYN 149 (248)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHH-------THHHHHH-HHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHH
T ss_pred CeEEEeCcCCCCCChhhCCHHHHHHHHHhh-------hhhHhhh-hhhhcccccccccccccccccccccccccccchhH
Confidence 9999999864321 0122233333221 1111211 1111122222 2333333321 1278
Q ss_pred hhHHHHHHHHHHHHhhcCC
Q 014177 175 VSNVMAAELVRVARNESKG 193 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~~ 193 (429)
.+|.....+.+.+..++..
T Consensus 150 asKaal~~ltk~lA~el~~ 168 (248)
T d2d1ya1 150 ASKGGLVNLTRSLALDLAP 168 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 8898888888887776653
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.15 E-value=2.2e-11 Score=111.85 Aligned_cols=84 Identities=19% Similarity=0.198 Sum_probs=71.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---------
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--------- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--------- 107 (429)
|.+|+||||||++.||.++++.|++++..+.|++.+|+.++++++.+..+.++.++++|++|.++++++++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 45689999999999999999999997323578889999999999887666789999999999988877654
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|++|||||...
T Consensus 81 ~idilinnAG~~~ 93 (250)
T d1yo6a1 81 GLSLLINNAGVLL 93 (250)
T ss_dssp CCCEEEECCCCCC
T ss_pred CeEEEEEcCcccC
Confidence 3899999998643
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.13 E-value=1.9e-10 Score=106.72 Aligned_cols=104 Identities=22% Similarity=0.304 Sum_probs=84.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh------HHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK------GAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~------~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
+||||||||+||+|+++++.|+++ |++|++.+|+... ...+.......++++.+|+.+.+.+.+.+++++.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceee
Confidence 579999999999999999999997 8999999997543 22222222356899999999999999999999999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+|+++.....+...+++++.+.++..+...++
T Consensus 81 i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~ 112 (307)
T d1qyca_ 81 ISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE 112 (307)
T ss_dssp EECCCGGGSGGGHHHHHHHHHHCCCSEEECSC
T ss_pred eecccccccchhhHHHHHHHHhccccceeeec
Confidence 99998776667788999999988766554433
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.10 E-value=4.9e-11 Score=110.89 Aligned_cols=90 Identities=17% Similarity=0.267 Sum_probs=73.1
Q ss_pred cCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc-hhHHHHHHHh---CCCcEEEEeeCCChHHHHH
Q 014177 29 DGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR-EKGAAMVSTL---GKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 29 ~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~-~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~ 104 (429)
|....+.++++|+++||||++.||+++++.|++. |++|++.+|+. +.++++.+.+ +.++..+++|++|++++.+
T Consensus 8 ~~~~~~~sL~gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~ 85 (272)
T d1g0oa_ 8 PLGPQSASLEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVR 85 (272)
T ss_dssp CSSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHH
Confidence 3444666799999999999999999999999997 89999998764 4555555443 3568899999999998888
Q ss_pred Hhc-------CccEEEecCCCCC
Q 014177 105 ALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 105 ~~~-------~~DvVi~~agp~~ 120 (429)
+++ ++|++||++|...
T Consensus 86 ~~~~~~~~~g~idilV~nag~~~ 108 (272)
T d1g0oa_ 86 MFEEAVKIFGKLDIVCSNSGVVS 108 (272)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHhCCCCccccccccch
Confidence 765 6899999997543
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=8.2e-10 Score=101.42 Aligned_cols=82 Identities=22% Similarity=0.307 Sum_probs=71.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc-----
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
.+|.+|||||++.||+++++.|+++ |++|++.+|+.+++++..+++. .++.++++|++|.++++++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999998 8999999999999888877663 357789999999998888765
Q ss_pred --CccEEEecCCCCCC
Q 014177 108 --DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 --~~DvVi~~agp~~~ 121 (429)
++|++||+||....
T Consensus 80 ~G~iDilVnnAg~~~~ 95 (254)
T d2gdza1 80 FGRLDILVNNAGVNNE 95 (254)
T ss_dssp HSCCCEEEECCCCCCS
T ss_pred cCCcCeeccccccccc
Confidence 79999999997654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.08 E-value=8.2e-11 Score=107.34 Aligned_cols=145 Identities=13% Similarity=0.073 Sum_probs=94.3
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCce-------EEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc---
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQ-------IVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~-------v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
.||||||++.||+++++.|+++ |++ |++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 3 VvlITGas~GIG~aia~~la~~--G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 80 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHh--CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 4799999999999999999998 665 8899999999988877653 457789999999998887765
Q ss_pred ----CccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHH-HHcCCcEEecCC--------
Q 014177 108 ----DVDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRA-IAANIPAITTGG-------- 170 (429)
Q Consensus 108 ----~~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a-~~~g~~~i~~~g-------- 170 (429)
++|++||+||...... +..-++...+. +-...+......+.... +..|..+.+++.
T Consensus 81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~v-------Nl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~ 153 (240)
T d2bd0a1 81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNT-------NLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH 153 (240)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred HHcCCcceeecccccccCCccccCCHHHHhhcCCE-------eehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCC
Confidence 6899999998654210 12223322221 11122221111121111 223444444321
Q ss_pred -CccchhHHHHHHHHHHHHhhcCCC
Q 014177 171 -IYPGVSNVMAAELVRVARNESKGE 194 (429)
Q Consensus 171 -~~pG~s~~~a~~~~~~~~~~~~~~ 194 (429)
..|+.||.....+.+.++.++...
T Consensus 154 ~~~Y~asK~al~~lt~~la~el~~~ 178 (240)
T d2bd0a1 154 SSIYCMSKFGQRGLVETMRLYARKC 178 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCcC
Confidence 127888988888888877665544
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.08 E-value=6.2e-11 Score=109.64 Aligned_cols=138 Identities=13% Similarity=0.214 Sum_probs=95.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
||||||||+||||+++++.|.++ |++|+..+|+. +|+.|.++++++++ ++|+||||++
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~------------------~D~~d~~~~~~~l~~~~~d~vih~a~ 61 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQD------------------LDITNVLAVNKFFNEKKPNVVINCAA 61 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTT------------------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechh------------------ccCCCHHHHHHHHHHcCCCEEEeecc
Confidence 67999999999999999999987 89999988752 48999999999887 7899999998
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHH-HhhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRA-KSFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~-~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .....+.+.+...+..++..+++..+.... .+..+. . + +..-..|+.++...+
T Consensus 62 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~----~-~--~~~~~~~~~~k~~~e 134 (281)
T d1vl0a_ 62 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF----D-E--VNPQSAYGKTKLEGE 134 (281)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT----S-C--CCCCSHHHHHHHHHH
T ss_pred ccccccccccchhhcccccccccccccccccccccccccccceeeecccccccccc----c-c--ccchhhhhhhhhHHH
Confidence 6542 112455666777777776666544332111 011111 0 0 112244777787777
Q ss_pred HHHHHHHhhcCCCCeEEEEEeeecCCCC
Q 014177 182 ELVRVARNESKGEPERLRFSYYTAGTGG 209 (429)
Q Consensus 182 ~~~~~~~~~~~~~v~~i~~~~~~~G~~~ 209 (429)
.+++. ...+...+|. .+.+|++.
T Consensus 135 ~~~~~----~~~~~~i~R~-~~vyG~~~ 157 (281)
T d1vl0a_ 135 NFVKA----LNPKYYIVRT-AWLYGDGN 157 (281)
T ss_dssp HHHHH----HCSSEEEEEE-CSEESSSS
T ss_pred HHHHH----hCCCccccce-eEEeCCCc
Confidence 77764 5667888998 56788865
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.07 E-value=1.4e-09 Score=93.60 Aligned_cols=134 Identities=19% Similarity=0.199 Sum_probs=105.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
.|+|+|+|| |.+|+.+++.|.+. |++|++++|+.++++.+++.++ .......+..+.......+...|+++.+...
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~--g~~V~v~dr~~~~a~~l~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~ 77 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVAKHDLVISLIPY 77 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTT--TCEEEEEESCHHHHHHHHTTCT-TEEEEECCTTCHHHHHHHHTTSSEEEECSCG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEECChHHHHHHHhccc-ccccccccccchhhhHhhhhccceeEeeccc
Confidence 489999995 99999999999997 8999999999999999988764 3455556777777788888899999987644
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHH
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAE 182 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~ 182 (429)
.. ...++..|.+.+++++|++.... ....+++.+...+...+..++..+.........
T Consensus 78 ~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (182)
T d1e5qa1 78 TF---HATVIKSAIRQKKHVVTTSYVSP---AMMELDQAAKDAGITVMNEIGYSAMAKLVGVPC 135 (182)
T ss_dssp GG---HHHHHHHHHHHTCEEECSSCCCH---HHHHTHHHHHHTTCEEECSCBCCHHHHHHHHHH
T ss_pred hh---hhHHHHHHHhhccceeecccCcH---HHHHHHHHhccccceeehhhhcchhhhhhcchh
Confidence 32 26788899999999999886543 344677888888888888888877655444443
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.06 E-value=5.1e-11 Score=110.85 Aligned_cols=124 Identities=16% Similarity=0.205 Sum_probs=87.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ag 117 (429)
||||||||+||||+++++.|.++ + +++.++++... ..+|++|.+.++++++ ++|+||||||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~--g-~~v~~~~~~~~--------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa 63 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV--G-NLIALDVHSKE--------------FCGDFSNPKGVAETVRKLRPDVIVNAAA 63 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT--S-EEEEECTTCSS--------------SCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--C-CEEEEECCCcc--------------ccCcCCCHHHHHHHHHHcCCCEEEEecc
Confidence 67999999999999999999886 5 45555554321 3469999999999887 6799999998
Q ss_pred CCCC---------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHH-hhHHHHHHcCCcEEecCCCccchhHHHHH
Q 014177 118 PFQQ---------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAK-SFKDRAIAANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 118 p~~~---------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~-~~~~~a~~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
.... .++..++++|.+.+++++.++++..++.... +..|. .+ +..-..|+.+|..++
T Consensus 64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~-----~~--~~p~~~y~~~k~~~e 136 (298)
T d1n2sa_ 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DA--TSPLNVYGKTKLAGE 136 (298)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SC--CCCSSHHHHHHHHHH
T ss_pred cccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccc-----cc--cCCCchHhhhhhhhh
Confidence 5431 2356889999999999888876654432111 22221 11 112245899999888
Q ss_pred HHHHHH
Q 014177 182 ELVRVA 187 (429)
Q Consensus 182 ~~~~~~ 187 (429)
.++..+
T Consensus 137 ~~~~~~ 142 (298)
T d1n2sa_ 137 KALQDN 142 (298)
T ss_dssp HHHHHH
T ss_pred hhHHhh
Confidence 887653
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.05 E-value=1e-10 Score=107.17 Aligned_cols=83 Identities=19% Similarity=0.254 Sum_probs=67.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc-------
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
.||+||||||++.||+++++.|++. ..+++|++.+|+.++++++.+.. ..++.++++|++|.++++++++
T Consensus 1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 3789999999999999999999742 13789999999999887765432 3578999999999988776543
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 81 ~~~iDiLvnNAg~~~ 95 (248)
T d1snya_ 81 DQGLNVLFNNAGIAP 95 (248)
T ss_dssp GGCCSEEEECCCCCC
T ss_pred cCCcceEEeeccccc
Confidence 5899999998543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.04 E-value=2.9e-11 Score=111.70 Aligned_cols=83 Identities=17% Similarity=0.261 Sum_probs=68.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
.+.+|++|||||++.||+++++.|++. |++|++.+ |+.+.++++.+++ +.++..+++|++|.++++++++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS 80 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHH
Confidence 488999999999999999999999998 89998865 5555556655544 4578899999999998888765
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||+||...
T Consensus 81 ~~g~idilinnag~~~ 96 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEV 96 (259)
T ss_dssp HHSCEEEEECCCCCCC
T ss_pred HcCCCcEEEecccccc
Confidence 7999999998654
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=6.8e-11 Score=109.77 Aligned_cols=146 Identities=13% Similarity=0.093 Sum_probs=96.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|++|||||++.||+++++.|+++ |++|++++|+.++++++.+++. ..+....+|.++.+......+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 68899999999999999999999998 8999999999999988876542 456778889998876665543
Q ss_pred --CccEEEecCCCCCCC----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC---------c
Q 014177 108 --DVDLVVHAAGPFQQA----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI---------Y 172 (429)
Q Consensus 108 --~~DvVi~~agp~~~~----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~---------~ 172 (429)
..|+++|++|..... .+..-++...+ ++....+......+....+..|..+++++.. .
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~-------vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~ 162 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSME-------VNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAA 162 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHH-------HHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHH
T ss_pred hCCccccccccccccccccccCCHHHhhhhee-------eehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchH
Confidence 689999999754321 11222222222 1111112111111112223455555444211 2
Q ss_pred cchhHHHHHHHHHHHHhhc
Q 014177 173 PGVSNVMAAELVRVARNES 191 (429)
Q Consensus 173 pG~s~~~a~~~~~~~~~~~ 191 (429)
|+.||.....+++.++.++
T Consensus 163 Y~asKaal~~~~~~La~El 181 (269)
T d1xu9a_ 163 YSASKFALDGFFSSIRKEY 181 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7889999888888887664
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.00 E-value=2.2e-10 Score=104.70 Aligned_cols=145 Identities=14% Similarity=0.165 Sum_probs=92.4
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc-------Cc
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR-------DV 109 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~-------~~ 109 (429)
.||||||++.||+++++.|++. |++|++.+ |+.+.++++.+++ +.++.++++|++|.++++++++ ++
T Consensus 3 V~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999997 89998865 5666677666554 3567889999999998887765 78
Q ss_pred cEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHH-HHcCCcEEecCC---------Cccch
Q 014177 110 DLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRA-IAANIPAITTGG---------IYPGV 175 (429)
Q Consensus 110 DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a-~~~g~~~i~~~g---------~~pG~ 175 (429)
|++||+||...... +..-++...+ ++-...+......+.... +..|..+.+++- ..|+.
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~-------vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a 153 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVID-------LNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAA 153 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH-------HHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred CccccccccccccchhccchHHHHHHHh-------hhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHH
Confidence 99999998654310 1222222222 111111211111111111 223433333321 12888
Q ss_pred hHHHHHHHHHHHHhhcCCC
Q 014177 176 SNVMAAELVRVARNESKGE 194 (429)
Q Consensus 176 s~~~a~~~~~~~~~~~~~~ 194 (429)
||.....+.+.+..++...
T Consensus 154 sKaal~~ltk~lA~el~~~ 172 (244)
T d1edoa_ 154 AKAGVIGFSKTAAREGASR 172 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHChHHHHHHHhhh
Confidence 8988888888887776543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.98 E-value=6.6e-10 Score=100.76 Aligned_cols=75 Identities=24% Similarity=0.351 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh-HHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE-GSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~-~~l~~~~~~~DvVi~~ 115 (429)
+++|++|||||++.||+++++.|++. |++|++.+|+.+++++. ..+++.+|+++. +.+.+.+.++|++||+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~~l~~~------~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn 73 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRS------GHRYVVCDLRKDLDLLFEKVKEVDILVLN 73 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHT------CSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHhc------CCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence 67899999999999999999999998 89999999998776542 356788999873 5566667799999999
Q ss_pred CCCC
Q 014177 116 AGPF 119 (429)
Q Consensus 116 agp~ 119 (429)
||..
T Consensus 74 AG~~ 77 (234)
T d1o5ia_ 74 AGGP 77 (234)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9854
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=1.7e-10 Score=107.60 Aligned_cols=153 Identities=19% Similarity=0.279 Sum_probs=99.3
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecC--chhHHHHHHHhCCCcEEEEeeCCChHH-HHHH-----hcCccEE
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRN--REKGAAMVSTLGKNSEFAEVNIYNEGS-LLMA-----LRDVDLV 112 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~--~~~~~~l~~~l~~~v~~~~~Dl~d~~~-l~~~-----~~~~DvV 112 (429)
||||||+||||+++++.|+++ |+ +|+++|+- ..+...+.+ .. ..|..+.+. .... +..+++|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~--g~~~V~~~d~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVD---LN----IADYMDKEDFLIQIMAGEEFGDVEAI 72 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHT---SC----CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred EEEecCccHHHHHHHHHHHhC--CCCeEEEEECCCCcchhhcccc---cc----hhhhccchHHHHHHhhhhcccchhhh
Confidence 899999999999999999997 54 78887632 222222221 11 112222221 2222 2468999
Q ss_pred EecCCCCCC-------------CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 113 VHAAGPFQQ-------------APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 113 i~~agp~~~-------------~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
+|+|+.... .++..++++|.+.+++.+..++...+........+.. . .......||.+|..
T Consensus 73 ~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~-~-----~~~~~~~Y~~~K~~ 146 (307)
T d1eq2a_ 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-E-----YEKPLNVYGYSKFL 146 (307)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-G-----GCCCSSHHHHHHHH
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccc-c-----ccccccccccccch
Confidence 999864332 2356788899999999987776655432111110000 0 01123559999999
Q ss_pred HHHHHHHHHhhcCCCCeEEEEEeeecCCCCC
Q 014177 180 AAELVRVARNESKGEPERLRFSYYTAGTGGA 210 (429)
Q Consensus 180 a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~~ 210 (429)
++.+++.+.++++.++..+|. ++.+||+..
T Consensus 147 ~e~~~~~~~~~~~~~~~~~r~-~~vyGp~~~ 176 (307)
T d1eq2a_ 147 FDEYVRQILPEANSQIVGFRY-FNVYGPREG 176 (307)
T ss_dssp HHHHHHHHGGGCSSCEEEEEE-CEEESSSCG
T ss_pred hhhhccccccccccccccccc-eeEeecccc
Confidence 999999999888889999998 678998764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.96 E-value=1.2e-09 Score=104.51 Aligned_cols=103 Identities=15% Similarity=0.047 Sum_probs=79.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH-HHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG-SLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~-~l~~~~~~~DvVi~~a 116 (429)
++|+|+||||+|++|+++++.|+++ |++|++..|++.+.....-....+++++++|+.|.. .++.+++++|++++..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~ 79 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT 79 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence 4689999999999999999999997 899999999887654322122246899999999854 5777889999998876
Q ss_pred CCCCC---CchHHHHHHHHHcCC-cEEEeC
Q 014177 117 GPFQQ---APKCTVLEAAIETKT-AYIDVC 142 (429)
Q Consensus 117 gp~~~---~~~~~v~~aa~~~gv-~~vdis 142 (429)
.+... ..+.+++++|.++|+ +++..|
T Consensus 80 ~~~~~~~~~~~~~~~~aa~~agv~~~v~~S 109 (350)
T d1xgka_ 80 TSQAGDEIAIGKDLADAAKRAGTIQHYIYS 109 (350)
T ss_dssp CSTTSCHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred ccccchhhhhhhHHHHHHHHhCCCceEEEe
Confidence 54432 134789999999996 445444
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.96 E-value=2.9e-10 Score=107.17 Aligned_cols=84 Identities=21% Similarity=0.279 Sum_probs=67.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC---------chhHHHHHHHhCCCcEEEEeeCCChHHHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN---------REKGAAMVSTLGKNSEFAEVNIYNEGSLLMA 105 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~---------~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~ 105 (429)
.++++|.+|||||++.||+++++.|+++ |++|++.+|+ .+.++++.+++..+.....+|+.|.++++++
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 80 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKL 80 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH
Confidence 4588999999999999999999999998 8999998764 3456666666654566788999998776665
Q ss_pred hc-------CccEEEecCCCCC
Q 014177 106 LR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 106 ~~-------~~DvVi~~agp~~ 120 (429)
++ ++|++||+||...
T Consensus 81 v~~~~~~~G~iDiLVnNAGi~~ 102 (302)
T d1gz6a_ 81 VKTALDTFGRIDVVVNNAGILR 102 (302)
T ss_dssp HHHHHHHTSCCCEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCccCC
Confidence 54 7999999998654
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=4e-10 Score=102.95 Aligned_cols=80 Identities=10% Similarity=0.162 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc---CccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR---DVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---~~DvVi 113 (429)
+++|++|||||++.||+++++.|+++ |++|++.+|++++++++.+.. .++...+|+.+.+.++...+ +.|++|
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~~~l~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~id~lV 79 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYP--GIQTRVLDVTKKKQIDQFANEVERLDVLF 79 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGST--TEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcc--CCceeeeeccccccccccccccccceeEE
Confidence 78899999999999999999999998 899999999998888776543 47788899988776665544 899999
Q ss_pred ecCCCCC
Q 014177 114 HAAGPFQ 120 (429)
Q Consensus 114 ~~agp~~ 120 (429)
|++|...
T Consensus 80 n~ag~~~ 86 (245)
T d2ag5a1 80 NVAGFVH 86 (245)
T ss_dssp ECCCCCC
T ss_pred ecccccC
Confidence 9998654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.93 E-value=2e-09 Score=98.79 Aligned_cols=84 Identities=21% Similarity=0.253 Sum_probs=65.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH---HhC-CCcEEEEeeCC-ChHHHHHHhc---
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS---TLG-KNSEFAEVNIY-NEGSLLMALR--- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~---~l~-~~v~~~~~Dl~-d~~~l~~~~~--- 107 (429)
++++|+|+||||++.||.++++.|+++ |++|++.+|+.++.+.+.+ ..+ .++.+..+|++ +.++++++++
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence 588999999999999999999999998 8888888887766555433 222 35788999998 5555655543
Q ss_pred ----CccEEEecCCCCCC
Q 014177 108 ----DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 ----~~DvVi~~agp~~~ 121 (429)
++|++|||||....
T Consensus 80 ~~~g~iDilvnnAG~~~~ 97 (254)
T d1sbya1 80 DQLKTVDILINGAGILDD 97 (254)
T ss_dssp HHHSCCCEEEECCCCCCT
T ss_pred HHcCCCCEEEeCCCCCCH
Confidence 79999999997653
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.92 E-value=4.1e-09 Score=96.71 Aligned_cols=80 Identities=30% Similarity=0.457 Sum_probs=64.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc---hhHHHHHHHh---CCCcEEEEeeCCChHHHHHHhc----
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR---EKGAAMVSTL---GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~---~~~~~l~~~l---~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
..++|||||+|.||+++++.|+++ |+ +|++++|+. +..+++.+++ +.++.++.+|++|.++++++++
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~ 86 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 86 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cCEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence 379999999999999999999998 66 688888864 3444444433 3468899999999999888875
Q ss_pred --CccEEEecCCCCC
Q 014177 108 --DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 --~~DvVi~~agp~~ 120 (429)
++|.|||++|...
T Consensus 87 ~~~i~~vv~~ag~~~ 101 (259)
T d2fr1a1 87 DVPLSAVFHAAATLD 101 (259)
T ss_dssp TSCEEEEEECCCCCC
T ss_pred ccccccccccccccc
Confidence 4789999998654
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.91 E-value=1.5e-10 Score=106.74 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=70.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc-
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
..|.+|.++||||++.||+++++.|++. ..|++|++.+|+.++++++.+++. .++..+++|++|.++++++++
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 4578899999999999999999999862 238999999999999988877652 357889999999998877753
Q ss_pred ----------CccEEEecCCCC
Q 014177 108 ----------DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----------~~DvVi~~agp~ 119 (429)
..|++||+||..
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~ 103 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATL 103 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCC
T ss_pred HHHhhhhccCceEEEEeccccc
Confidence 467999999854
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=1.1e-09 Score=101.71 Aligned_cols=80 Identities=26% Similarity=0.378 Sum_probs=68.8
Q ss_pred CCeE-EEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---CCcEEEEeeCCChHHHHHHhc-------
Q 014177 39 NARV-LVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEVNIYNEGSLLMALR------- 107 (429)
Q Consensus 39 ~~~V-lV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~Dl~d~~~l~~~~~------- 107 (429)
+|+| |||||++.||.++++.|++.+ +..|++++|+.+++++..+++. .++.++++|++|.++++++++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence 4666 899999999999999999753 6899999999999988877663 568899999999998887654
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 81 ~iDiLVnNAGi~ 92 (275)
T d1wmaa1 81 GLDVLVNNAGIA 92 (275)
T ss_dssp SEEEEEECCCCC
T ss_pred CcEEEEEcCCcC
Confidence 799999999864
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.81 E-value=6.8e-09 Score=95.12 Aligned_cols=82 Identities=15% Similarity=0.154 Sum_probs=66.2
Q ss_pred CCCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhc----
Q 014177 36 KNRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
++++|++|||||+| .||+++++.|++. |++|++.+|+.+..+...+.. ..+...+++|++|.++++++++
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE 82 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence 47899999999986 6999999999997 899999999866544332221 2467789999999998888765
Q ss_pred ---CccEEEecCCCC
Q 014177 108 ---DVDLVVHAAGPF 119 (429)
Q Consensus 108 ---~~DvVi~~agp~ 119 (429)
++|++||+||..
T Consensus 83 ~~g~iDilVnnag~~ 97 (256)
T d1ulua_ 83 AFGGLDYLVHAIAFA 97 (256)
T ss_dssp HHSSEEEEEECCCCC
T ss_pred hcCCceEEEeccccc
Confidence 699999999854
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.79 E-value=6.9e-09 Score=91.97 Aligned_cols=136 Identities=16% Similarity=0.083 Sum_probs=83.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-cCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL-RDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~-~~~DvVi~~ag 117 (429)
+|+|||+|||||+|+++++.|++++.-.+|++..|++.. ....+..+..|..++.+.+ ..+|.||||+|
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g 71 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGSIDTAFCCLG 71 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hcccccccccchhhhhhccccchheeeeeee
Confidence 489999999999999999999997321267776765432 1112344555555444444 36899999997
Q ss_pred CCCC-------------CchHHHHHHHHHcCCcE-EEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHH
Q 014177 118 PFQQ-------------APKCTVLEAAIETKTAY-IDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAEL 183 (429)
Q Consensus 118 p~~~-------------~~~~~v~~aa~~~gv~~-vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~ 183 (429)
.... .++.+++++|.+.+++. +.+++...+ ......|+.+|..++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~-------------------~~~~~~y~~~K~~~E~~ 132 (212)
T d2a35a1 72 TTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGAD-------------------AKSSIFYNRVKGELEQA 132 (212)
T ss_dssp CCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC-------------------TTCSSHHHHHHHHHHHH
T ss_pred eeccccccccccccchhhhhhhcccccccccccccccccccccc-------------------cccccchhHHHHHHhhh
Confidence 5421 13467788888888765 444432211 01123477788888877
Q ss_pred HHHHHhhcC-CCCeEEEEEeeecCCC
Q 014177 184 VRVARNESK-GEPERLRFSYYTAGTG 208 (429)
Q Consensus 184 ~~~~~~~~~-~~v~~i~~~~~~~G~~ 208 (429)
++ +.. .....+|.. ..+|+.
T Consensus 133 l~----~~~~~~~~I~Rp~-~v~G~~ 153 (212)
T d2a35a1 133 LQ----EQGWPQLTIARPS-LLFGPR 153 (212)
T ss_dssp HT----TSCCSEEEEEECC-SEESTT
T ss_pred cc----ccccccceeeCCc-ceeCCc
Confidence 65 223 235566763 345654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=5.2e-08 Score=88.54 Aligned_cols=81 Identities=27% Similarity=0.343 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------C
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------D 108 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~ 108 (429)
++++|.++||||++.||+++++.|++. |++|++.+|+.++++...+++..+.....+|+.+.+.+++... .
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGR 79 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccc
Confidence 589999999999999999999999998 8999999999999999999988788899999999876655443 5
Q ss_pred ccEEEecCCC
Q 014177 109 VDLVVHAAGP 118 (429)
Q Consensus 109 ~DvVi~~agp 118 (429)
.|.++++++.
T Consensus 80 ~~~~~~~~~~ 89 (248)
T d2o23a1 80 VDVAVNCAGI 89 (248)
T ss_dssp CCEEEECCCC
T ss_pred cccccccccc
Confidence 7888888753
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=6.7e-09 Score=96.82 Aligned_cols=145 Identities=16% Similarity=0.078 Sum_probs=87.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCce---EEEEecCchhHHHH---HHHhC---CCcEEEEeeCCChHHHHHHhc---
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQ---IVVGSRNREKGAAM---VSTLG---KNSEFAEVNIYNEGSLLMALR--- 107 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~---v~v~~R~~~~~~~l---~~~l~---~~v~~~~~Dl~d~~~l~~~~~--- 107 (429)
|.||||||++.||+++++.|++. |.+ |.+..|+.+..+++ .+.+. .++..+++|++|.+++.++++
T Consensus 3 kVvlITGassGIG~a~A~~la~~--Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 80 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CEEEEccCCCHHHHHHHHHHHHC--CCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence 45789999999999999999997 555 44455665544433 33332 468899999999999888765
Q ss_pred --CccEEEecCCCCCCCc----hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHH-HHcCCcEEecCC--------C-
Q 014177 108 --DVDLVVHAAGPFQQAP----KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRA-IAANIPAITTGG--------I- 171 (429)
Q Consensus 108 --~~DvVi~~agp~~~~~----~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a-~~~g~~~i~~~g--------~- 171 (429)
..|++||++|...... +...++..++. +-...+......+.... +..|..+.+++. .
T Consensus 81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~v-------N~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~ 153 (285)
T d1jtva_ 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDV-------NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFND 153 (285)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHH-------HTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCH
T ss_pred ccchhhhhhcccccccccccchhHhhhhhhhhc-------chhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCch
Confidence 5899999997543210 12223333222 11111111111111111 223444444321 1
Q ss_pred ccchhHHHHHHHHHHHHhhcCC
Q 014177 172 YPGVSNVMAAELVRVARNESKG 193 (429)
Q Consensus 172 ~pG~s~~~a~~~~~~~~~~~~~ 193 (429)
.|+.||.....+++.++.++..
T Consensus 154 ~Y~asKaal~~l~~~la~El~~ 175 (285)
T d1jtva_ 154 VYCASKFALEGLCESLAVLLLP 175 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 2788999888888888776543
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=98.67 E-value=9.3e-08 Score=81.83 Aligned_cols=125 Identities=20% Similarity=0.259 Sum_probs=89.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
|++.||.|+| +|.+|+..++.|.+ .++++++. ++|+.+... ..... . ..+......++|+|+.|
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~-~~~~elvav~~~~~~~~~--------~~~~~--~---~~~~~~~~~~~D~Vvi~ 65 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAK-QPDMDLVGIFSRRATLDT--------KTPVF--D---VADVDKHADDVDVLFLC 65 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTT-CSSEEEEEEEESSSCCSS--------SSCEE--E---GGGGGGTTTTCSEEEEC
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHh-CCCcEEEEEEeccccccc--------ccccc--c---chhhhhhccccceEEEe
Confidence 4557899999 69999999999987 57888774 566654321 11111 1 12234456789999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChh-HHHHHHhhHHHHHHcCCcEEecCCCccchhHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTI-YSQRAKSFKDRAIAANIPAITTGGIYPGVSNVM 179 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~-~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~ 179 (429)
+++... ..++..|+++|+|.|+...... .......+++.++++|..++++.||.||...+.
T Consensus 66 tp~~~h---~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~~~~i~~g~~~~~~~~~ 127 (170)
T d1f06a1 66 MGSATD---IPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGRNPDFTASS 127 (170)
T ss_dssp SCTTTH---HHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSCHHHHHHHH
T ss_pred CCCccc---HHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCceEEEeceeccchhHHH
Confidence 876643 6899999999999886543322 223455788888999999999999999987654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.66 E-value=2.8e-09 Score=97.57 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=58.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-------CccEEE
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-------DVDLVV 113 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-------~~DvVi 113 (429)
++|||||++.||+.+++.|++. |++|++.+|+.++++++..... .+.++|++|.++++++++ ++|++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~~~~~~~~~~~---~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV 76 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAE---TYPQLKPMSEQEPAELIEAVTSAYGQVDVLV 76 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHH---HCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhhhC---cEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 6899999999999999999998 8999999999888877654321 234567777666555543 799999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
||||..
T Consensus 77 nNAg~~ 82 (252)
T d1zmta1 77 SNDIFA 82 (252)
T ss_dssp EECCCC
T ss_pred ECCcCC
Confidence 999743
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.59 E-value=5.5e-08 Score=89.16 Aligned_cols=81 Identities=22% Similarity=0.226 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchhH-HHHHHHhCCCcEEEEeeCCChHHHHHHhc------
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREKG-AAMVSTLGKNSEFAEVNIYNEGSLLMALR------ 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~~-~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------ 107 (429)
|++|++|||||+| .||.++++.|++. |++|++.+|+.+++ +++.+.++.+...+++|+++.+++..+++
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~ 81 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI 81 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence 6789999999654 4999999999997 89999999998776 45666666678889999999876555432
Q ss_pred ----CccEEEecCCCC
Q 014177 108 ----DVDLVVHAAGPF 119 (429)
Q Consensus 108 ----~~DvVi~~agp~ 119 (429)
..|+++|++|..
T Consensus 82 ~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 82 GAGNKLDGVVHSIGFM 97 (268)
T ss_dssp CTTCCEEEEEECCCCC
T ss_pred ccCCCcceeeeccccc
Confidence 479999999854
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.54 E-value=9.7e-08 Score=87.88 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=65.0
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchh---HHHHHHHhCCCcEEEEeeCCChHHHHHHhc----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREK---GAAMVSTLGKNSEFAEVNIYNEGSLLMALR---- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~---~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~---- 107 (429)
|++|++|||||+| .||.++++.|+++ |++|++.+|+.+. ++++.+.. ....+.++|+++.+++.+++.
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQEL-NSPYVYELDVSKEEHFKSLYNSVKK 79 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhC-CceeEeeecccchhhHHHHHHHHHH
Confidence 7889999999876 6999999999997 8999999998643 33333332 456788999999888777663
Q ss_pred ---CccEEEecCCCCC
Q 014177 108 ---DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ---~~DvVi~~agp~~ 120 (429)
++|++||++|.+.
T Consensus 80 ~~g~id~lV~nag~~~ 95 (274)
T d2pd4a1 80 DLGSLDFIVHSVAFAP 95 (274)
T ss_dssp HTSCEEEEEECCCCCC
T ss_pred HcCCCCeEEeeccccc
Confidence 7999999998654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.54 E-value=1.6e-06 Score=70.63 Aligned_cols=114 Identities=17% Similarity=0.134 Sum_probs=81.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp 118 (429)
|+|+|+|+ |.+|+.+++.|.+. |++|++++.++++.+++.+++ ...++.+|.+|.+.++++ ++++|.++-+...
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~~~~~--~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~ 75 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDAGIEDADMYIAVTGK 75 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHC--CCCcceecCChhhhhhhhhhh--hhhhccCcccchhhhhhcChhhhhhhcccCCc
Confidence 68999995 99999999999987 899999999999999887765 467899999999998887 5689999977542
Q ss_pred CCCCchHHHHHHHHHcCCcEEE-eCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 119 FQQAPKCTVLEAAIETKTAYID-VCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vd-is~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
-. .+.-+...+.+.+.+.+. ...+..+ .+..++.|+..++
T Consensus 76 d~--~N~~~~~~~k~~~~~~iI~~~~~~~~-------~~~l~~~G~d~vi 116 (132)
T d1lssa_ 76 EE--VNLMSSLLAKSYGINKTIARISEIEY-------KDVFERLGVDVVV 116 (132)
T ss_dssp HH--HHHHHHHHHHHTTCCCEEEECSSTTH-------HHHHHHTTCSEEE
T ss_pred HH--HHHHHHHHHHHcCCceEEEEecCHHH-------HHHHHHCCCCEEE
Confidence 11 112224445566766543 3333332 2334456765444
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.51 E-value=7.5e-08 Score=86.80 Aligned_cols=136 Identities=17% Similarity=0.141 Sum_probs=79.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH-------Hh--cCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM-------AL--RDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~-------~~--~~~D 110 (429)
.|||||||++.||+++++.|++. |++|++.||+.+... .......+|+.+.+.... .+ .++|
T Consensus 3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD 73 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD 73 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhcc-------cccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence 58999999999999999999997 899999999875421 122334455554433222 12 2589
Q ss_pred EEEecCCCCCC-----CchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCC---------Cccchh
Q 014177 111 LVVHAAGPFQQ-----APKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGG---------IYPGVS 176 (429)
Q Consensus 111 vVi~~agp~~~-----~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g---------~~pG~s 176 (429)
++|||||.+.. ......++...+.. + ...+. ..+......++.|..+.+++. ..|+.|
T Consensus 74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n-----~--~~~~~-~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~as 145 (235)
T d1ooea_ 74 GVFCVAGGWAGGSASSKDFVKNADLMIKQS-----V--WSSAI-AAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMA 145 (235)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHH-----H--HHHHH-HHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred EEEECCcccccccccccCcHHHHhhHhhhH-----H--HHHHH-HhhhcccccccceEEEEeccHHhcCCcccccchHHH
Confidence 99999985432 11122233332211 0 01111 111111222334544444431 228889
Q ss_pred HHHHHHHHHHHHhhcC
Q 014177 177 NVMAAELVRVARNESK 192 (429)
Q Consensus 177 ~~~a~~~~~~~~~~~~ 192 (429)
|.....+.+.+..++.
T Consensus 146 Kaal~~l~~~la~e~~ 161 (235)
T d1ooea_ 146 KAAVHHLTSSLAAKDS 161 (235)
T ss_dssp HHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999998876654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.50 E-value=9.4e-08 Score=86.22 Aligned_cols=138 Identities=13% Similarity=0.089 Sum_probs=79.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-------c--C
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL-------R--D 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~-------~--~ 108 (429)
++|+||||||+|.||+++++.|+++ |++|++++++..... .......+|..+.+..+... . +
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK 71 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccccc-------cccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999997 899999998765311 12234455555544433322 2 4
Q ss_pred ccEEEecCCCCCCC-----chHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCC---------ccc
Q 014177 109 VDLVVHAAGPFQQA-----PKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGI---------YPG 174 (429)
Q Consensus 109 ~DvVi~~agp~~~~-----~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~---------~pG 174 (429)
+|++||+||.+... .....++...+..+ ...+. ..+......++.|..+.+++.. .|+
T Consensus 72 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~-------~~~~~-~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~ 143 (236)
T d1dhra_ 72 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI-------WTSTI-SSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYG 143 (236)
T ss_dssp EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHH-------HHHHH-HHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHH
T ss_pred ceEEEECCcccccccchhcCCHHHHHHHHHHcc-------hHHHH-HHHHHHHhcccccceeEEccHHHcCCccCCcccH
Confidence 89999999853210 11122222221110 01111 1111111123345444443221 288
Q ss_pred hhHHHHHHHHHHHHhhcC
Q 014177 175 VSNVMAAELVRVARNESK 192 (429)
Q Consensus 175 ~s~~~a~~~~~~~~~~~~ 192 (429)
.||.....+.+.++.++.
T Consensus 144 asKaal~~lt~~la~El~ 161 (236)
T d1dhra_ 144 MAKGAVHQLCQSLAGKNS 161 (236)
T ss_dssp HHHHHHHHHHHHHTSTTS
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 899999999998887654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.32 E-value=6.2e-07 Score=81.50 Aligned_cols=81 Identities=15% Similarity=0.159 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhc-----
Q 014177 37 NRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALR----- 107 (429)
Q Consensus 37 ~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~----- 107 (429)
+++|++|||||+| .||+++++.|++. |++|++.+|+.+..+.+.+... .+....+.|+.+..++.+.+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 6789999999987 6999999999997 8999999998665544433222 456788899999877666553
Q ss_pred --CccEEEecCCCC
Q 014177 108 --DVDLVVHAAGPF 119 (429)
Q Consensus 108 --~~DvVi~~agp~ 119 (429)
..|++||+++..
T Consensus 81 ~~~~d~~v~~a~~~ 94 (258)
T d1qsga_ 81 WPKFDGFVHSIGFA 94 (258)
T ss_dssp CSSEEEEEECCCCC
T ss_pred ccccceEEEeeccc
Confidence 679999999754
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.25 E-value=4e-06 Score=70.50 Aligned_cols=98 Identities=23% Similarity=0.364 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++.+++|+|+|+ |.+|+.+++.|... +. +++++.|+.++++.+++.++. .. .+.+++.+.+.++|+||+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~--g~~~i~v~nRt~~ka~~l~~~~~~--~~-----~~~~~~~~~l~~~Divi~ 90 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGG--EA-----VRFDELVDHLARSDVVVS 90 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTC--EE-----CCGGGHHHHHHTCSEEEE
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhc--CCcEEEEEcCcHHHHHHHHHhhhc--cc-----ccchhHHHHhccCCEEEE
Confidence 478899999996 88999999999997 55 799999999999999988752 22 234567788899999999
Q ss_pred cCCCCCCCchHHHHHHHHHcC---C--cEEEeCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETK---T--AYIDVCD 143 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~g---v--~~vdis~ 143 (429)
|.+.....-+...++..++.. - -.+|++-
T Consensus 91 atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlav 124 (159)
T d1gpja2 91 ATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 124 (159)
T ss_dssp CCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred ecCCCCccccHhhhHHHHHhcccCCCeEEEeecC
Confidence 986432211245565555432 2 3578863
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.22 E-value=1e-05 Score=65.61 Aligned_cols=72 Identities=29% Similarity=0.412 Sum_probs=61.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
|+++|+| +|.+|+.+++.|.+. |++|++++.++++.+.+.+. ....+.+|.++++.+.++ ++++|.||-+.+
T Consensus 1 k~~iIiG-~G~~G~~la~~L~~~--g~~vvvid~d~~~~~~~~~~---~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 1 KQFAVIG-LGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASY---ATHAVIANATEENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHT--TCCCEEEESCHHHHHHTTTT---CSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC--CCeEEEecCcHHHHHHHHHh---CCcceeeecccchhhhccCCccccEEEEEcC
Confidence 5789998 699999999999997 89999999999998877542 357788999999988887 678999887765
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.13 E-value=2.3e-06 Score=78.59 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=58.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC-chhHHHHHHHhC----CCcEEE-----------------EeeCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN-REKGAAMVSTLG----KNSEFA-----------------EVNIYN 98 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~-~~~~~~l~~~l~----~~v~~~-----------------~~Dl~d 98 (429)
.++||||++.||+++++.|++. |++|++.+|+ .+.++++.+++. .....+ .+|+++
T Consensus 4 VAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred EEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 5799999999999999999997 8999987764 455555555432 233344 445788
Q ss_pred hHHHHHHhc-------CccEEEecCCCCC
Q 014177 99 EGSLLMALR-------DVDLVVHAAGPFQ 120 (429)
Q Consensus 99 ~~~l~~~~~-------~~DvVi~~agp~~ 120 (429)
.++++++++ ++|++||+||...
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~ 110 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFY 110 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccC
Confidence 877777653 7999999998654
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.12 E-value=2.8e-06 Score=72.31 Aligned_cols=135 Identities=12% Similarity=0.168 Sum_probs=82.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
..++++|+|+|+ |..+++++..|.+. +.+|++++|+.++++++.+.+.........+..+. ...++|+||||
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~al~~~--g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~ 86 (170)
T d1nyta1 15 IRPGLRILLIGA-GGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINA 86 (170)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEEC
T ss_pred CCCCCEEEEECC-cHHHHHHHHHhccc--ceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeecc
Confidence 467899999996 66999999999997 67899999999999998887653222333333221 13579999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
...-......++-...+..+.-.+|+...+.. .++-..+++.|...+. .|+ .++.++.+..+.
T Consensus 87 Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~----T~ll~~A~~~G~~~~i-----~Gl-~MLi~Qa~~~f~ 149 (170)
T d1nyta1 87 TSSGISGDIPAIPSSLIHPGIYCYDMFYQKGK----TPFLAWCEQRGSKRNA-----DGL-GMLVAQAAHAFL 149 (170)
T ss_dssp CSCGGGTCCCCCCGGGCCTTCEEEESCCCSSC----CHHHHHHHHTTCCEEE-----CTH-HHHHHHHHHHHH
T ss_pred cccCcccCCCCCcHHHhccCcEEEEeecCCCC----CHHHHHHHHcCCCccc-----CCH-HHHHHHHHHHHH
Confidence 73221100000101123344455687755422 2444567777765322 233 566777776553
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.10 E-value=1.4e-05 Score=68.58 Aligned_cols=140 Identities=9% Similarity=0.047 Sum_probs=91.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH---HHhC--CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV---STLG--KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~---~~l~--~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
++++++|+|+|+ |..|++++..|.+.+ ..++++++|+.++++++. +.+. ........|+.+.+.+.+.+..+|
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g-~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 92 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEG-LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASAD 92 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcC-CceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccc
Confidence 467899999996 669999999999973 348999999987665443 3332 124466789999988888889999
Q ss_pred EEEecCCC--CCCCchHHHH-HHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 111 LVVHAAGP--FQQAPKCTVL-EAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 111 vVi~~agp--~~~~~~~~v~-~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
+||||... .......... ....+.+.-.+|+...+.. .++...+++.|...+.| -.++..+++..+
T Consensus 93 iiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~----T~ll~~a~~~g~~~i~G-------l~Mli~Qa~~~f 161 (182)
T d1vi2a1 93 ILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM----TKLLQQAQQAGCKTIDG-------YGMLLWQGAEQF 161 (182)
T ss_dssp EEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSS----CHHHHHHHTTTCEEECH-------HHHHHHHHHHHH
T ss_pred eeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccc----cHHHHHHHHCcCeEecc-------HHHHHHHHHHHH
Confidence 99999743 2110000011 1223455567888755422 24455677788776544 245666666654
Q ss_pred H
Q 014177 188 R 188 (429)
Q Consensus 188 ~ 188 (429)
.
T Consensus 162 ~ 162 (182)
T d1vi2a1 162 T 162 (182)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FwdE/GAPDH domain-like superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain family: Homoserine dehydrogenase-like domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.10 E-value=3e-06 Score=77.22 Aligned_cols=129 Identities=11% Similarity=0.042 Sum_probs=93.1
Q ss_pred CccchhHHHHHHHHHHHHhhcCCCCeEEEEEeeecCCCC-----CCccHHHH----HHHHhCCceEEeeCCeEEEecCC-
Q 014177 171 IYPGVSNVMAAELVRVARNESKGEPERLRFSYYTAGTGG-----AGPTILAT----SFLLLGEEVVAYNKGEEITLEPY- 240 (429)
Q Consensus 171 ~~pG~s~~~a~~~~~~~~~~~~~~v~~i~~~~~~~G~~~-----~g~~~~~~----~~~~~~~~~~v~~~G~~~~v~~~- 240 (429)
.+||+++++|..+.+.+. +.+.++.++.. ||++-|.+ .-.+.|+| .+..+.+|+++++||+.+.+++.
T Consensus 1 LdPGidhm~A~~~i~~~~-~~~g~i~~f~s-~cGGLp~p~~~~np~~YkfsWsp~gvi~~~~~~A~~~~~G~~~~v~~~~ 78 (267)
T d1e5qa2 1 LDPGIDHLYAIKTIEEVH-AAGGKIKTFLS-YCGGLPAPESSDNPLGYKFSWSSRGVLLALRNAASFYKDGKVTNVAGPE 78 (267)
T ss_dssp BTTBHHHHHHHHHHHHHH-HTTCEEEEEEE-EEEEEECGGGCCSTTSCCBSSCHHHHHHHTTCCEEEEETTEEEEECGGG
T ss_pred CCCcHHHHHHHHHHHHHH-hcCCcEEEEEE-EecCccCCCCCCCCccceEEeccchhHHHhcCcceeeeCCeEEEECCHH
Confidence 479999999999999887 35778888887 77544322 11234444 45678899999999999999984
Q ss_pred --CCCeeeecCCCceeeeEEeecCchhhhhhhhcC---CCeEEEEcccChhhhhHHHHHhHhhcchhhccchh
Q 014177 241 --SGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG---VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRS 308 (429)
Q Consensus 241 --~~~~~~~fp~~~g~~~~~~~~~~e~~tl~~~~~---~~~v~~~~g~~~~~~~~~~~~~~~l~~~~ll~~~~ 308 (429)
...+.+.|++ .+..++|+ +-+.+... ..++ ++++... |.||+++...|+.++.+|+++++.
T Consensus 79 ~~~~~~~~~~~~-~~~~E~~p-nrdsl~y~-~~y~~~~i~t~~rg----TLRy~G~~~~~~~l~~lGl~~~~~ 144 (267)
T d1e5qa2 79 LMATAKPYFIYP-GFAFVAYP-NRDSTPYK-ERYQIPEADNIVRG----TLRYQGFPQFIKVLVDIGFLSDEE 144 (267)
T ss_dssp SGGGCEECCSST-TBCEEEEE-CSBCTTHH-HHTTCTTCSEEEEE----EEEETTHHHHHHHHHHTTTTCCCC
T ss_pred hhhhceeeeccC-CcceEEEe-cCCCcchh-hhhcCcchhhhhhh----hhcccchHHHHHHHHHHHhccCCc
Confidence 4555677764 56778874 33444333 3333 6666533 889999999999999999998764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.09 E-value=4e-06 Score=76.12 Aligned_cols=78 Identities=22% Similarity=0.347 Sum_probs=57.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHh----CCCcEEEEeeCCCh----HHHHHH------
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTL----GKNSEFAEVNIYNE----GSLLMA------ 105 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l----~~~v~~~~~Dl~d~----~~l~~~------ 105 (429)
.+|||||++.||+++++.|++. |++|++.+|+.++ .+++.+++ ..+....+.|..+. +.+.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 80 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence 5799999999999999999998 8999999998664 34444443 34566666666542 333332
Q ss_pred -hcCccEEEecCCCCC
Q 014177 106 -LRDVDLVVHAAGPFQ 120 (429)
Q Consensus 106 -~~~~DvVi~~agp~~ 120 (429)
+.++|++||+||...
T Consensus 81 ~~g~iDilvnnAG~~~ 96 (266)
T d1mxha_ 81 AFGRCDVLVNNASAYY 96 (266)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HhCCCCEEEECCccCC
Confidence 237999999998654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.08 E-value=3e-06 Score=70.09 Aligned_cols=121 Identities=16% Similarity=0.136 Sum_probs=72.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
||+|.|+||||++|+.+++.|+++. +-.+++...++......... ..-.....++.+.+ .++++|++|.|+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~---~~~~~~~~~~~~~~----~~~~~DivF~a~ 73 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSF---GGTTGTLQDAFDLE----ALKALDIIVTCQ 73 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGG---GTCCCBCEETTCHH----HHHTCSEEEECS
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccc---cCCceeeecccchh----hhhcCcEEEEec
Confidence 6799999999999999999887642 34577766655433211111 01122334454543 246899999998
Q ss_pred CCCCCCchHHHHHHHHHcCCc--EEEeCCChhHHH-------HH-HhhHHHHHHcCCcEEecC
Q 014177 117 GPFQQAPKCTVLEAAIETKTA--YIDVCDDTIYSQ-------RA-KSFKDRAIAANIPAITTG 169 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~--~vdis~~~~~~~-------~~-~~~~~~a~~~g~~~i~~~ 169 (429)
+--. ...+...+.+.|++ .||.+++.-+.. .. ...-+.+..+|..-++|.
T Consensus 74 ~~~~---s~~~~~~~~~~g~~~~VID~Ss~fR~~~dvplviPEVN~~~i~~~~~~g~~~~ig~ 133 (146)
T d1t4ba1 74 GGDY---TNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (146)
T ss_dssp CHHH---HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CchH---HHHhhHHHHhcCCCeecccCCcccccCCCCcEECCCcCHHHHHHHHHcCCceEEec
Confidence 5321 25677778888976 678887642211 11 112234566777766653
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=98.05 E-value=4.3e-06 Score=71.74 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=64.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCc-----hhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNR-----EKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~-----~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
|++|.|+||||++|+.+++.|.+ +|.+++..+ .++. ++.......+.........+..+. .....++|+|
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~-HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dvv 76 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNR-HPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV---RDFSADVDVV 76 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG---GGTCTTCCEE
T ss_pred CcEEEEECcccHHHHHHHHHHHh-CCCCceEeeEeecccccccccccccccccccccccccccchhh---hhhhccccee
Confidence 67999999999999999999988 688887644 3321 122222222221112222222232 2235689999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
|.|++.... ........+.++..||++++.
T Consensus 77 f~alp~~~s---~~~~~~~~~~~~~vIDlSadf 106 (179)
T d2g17a1 77 FLATAHEVS---HDLAPQFLQAGCVVFDLSGAF 106 (179)
T ss_dssp EECSCHHHH---HHHHHHHHHTTCEEEECSSTT
T ss_pred eccccchhH---HHHhhhhhhcCceeecccccc
Confidence 998754322 466777888999999999764
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.03 E-value=4.5e-07 Score=84.19 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=36.0
Q ss_pred CCCCCCeEEEEcCCh--HHHHHHHHHHhHcCCCceEEEEecCchh
Q 014177 35 MKNRNARVLVLGGTG--RVGGSTAVALSKLCPDLQIVVGSRNREK 77 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G--~iG~~l~~~L~~~~~g~~v~v~~R~~~~ 77 (429)
.+|++|++|||||+| .||+++++.|++. |++|++.+|+...
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWVPAL 46 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCchhh
Confidence 458899999999876 6999999999998 8999999987643
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.99 E-value=2.5e-06 Score=70.58 Aligned_cols=97 Identities=21% Similarity=0.197 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++++|.|+||||++|+.+++.|.++ +|..++..+..+....+.+.. ..-+....++.+ ..+.++|++|.++
T Consensus 1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~---~~~~~~~~~~~~-----~~~~~~d~vf~a~ 72 (144)
T d2hjsa1 1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGF---AESSLRVGDVDS-----FDFSSVGLAFFAA 72 (144)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEE---TTEEEECEEGGG-----CCGGGCSEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceee---ccccchhccchh-----hhhccceEEEecC
Confidence 3588999999999999999999753 577788776544332221110 011122222211 2345899999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+.-. .........+.|+..||.+++.
T Consensus 73 p~~~---s~~~~~~~~~~g~~VID~Ss~f 98 (144)
T d2hjsa1 73 AAEV---SRAHAERARAAGCSVIDLSGAL 98 (144)
T ss_dssp CHHH---HHHHHHHHHHTTCEEEETTCTT
T ss_pred Ccch---hhhhccccccCCceEEeechhh
Confidence 5322 2567778889999999999865
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.98 E-value=7.4e-06 Score=73.90 Aligned_cols=65 Identities=18% Similarity=0.156 Sum_probs=50.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh--------cCcc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL--------RDVD 110 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~--------~~~D 110 (429)
||.|+||||++.||+++++.|++. |++|++.+|+.+. ...|+.+.+...... +..|
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAE--------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSS--------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChHH--------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 688999999999999999999997 8999999987542 245666655443322 2589
Q ss_pred EEEecCCCC
Q 014177 111 LVVHAAGPF 119 (429)
Q Consensus 111 vVi~~agp~ 119 (429)
+++|+||..
T Consensus 65 ~lv~~Ag~~ 73 (257)
T d1fjha_ 65 GLVLCAGLG 73 (257)
T ss_dssp EEEECCCCC
T ss_pred EEEEcCCCC
Confidence 999999754
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.94 E-value=2.2e-05 Score=66.63 Aligned_cols=136 Identities=17% Similarity=0.247 Sum_probs=82.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
...+++|+|+|+ |..+++++..|.+. +.+|+++.|+.++++.+.+.+.........+..+ ..+..+|+||||
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~aL~~~--~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----~~~~~~diiIN~ 86 (171)
T d1p77a1 15 LRPNQHVLILGA-GGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----IPLQTYDLVINA 86 (171)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----CCCSCCSEEEEC
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHccc--CceeeeccchHHHHHHHHHHHhhccccchhhhcc-----ccccccceeeec
Confidence 357789999996 66899999999885 5799999999999999988775322333333211 124689999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
..........+....-+..+.-.+|+..... ....+-..+++.|...+. .|+ .++.++.+..+.
T Consensus 87 tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p---~~T~~l~~A~~~g~~~v~-----~Gl-~Ml~~Qa~~~f~ 150 (171)
T d1p77a1 87 TSAGLSGGTASVDAEILKLGSAFYDMQYAKG---TDTPFIALCKSLGLTNVS-----DGF-GMLVAQAAHSFH 150 (171)
T ss_dssp CCC-------CCCHHHHHHCSCEEESCCCTT---SCCHHHHHHHHTTCCCEE-----CSH-HHHHHHHHHHHH
T ss_pred ccccccccccchhhhhhcccceeeeeeccCc---ccHHHHHHHHHcCCCccc-----CcH-HHHHHHHHHHHH
Confidence 7532211101111122345667788775321 112344667778864221 233 556677666543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.94 E-value=3.5e-05 Score=65.07 Aligned_cols=126 Identities=19% Similarity=0.279 Sum_probs=81.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
++++|+|+|+ |..+++++..|.+. +. +|.+++|+.++.+.+++.++. .. .+-.+ ..++|+||||.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~--g~~~I~I~nR~~~ka~~L~~~~~~--~~--~~~~~-------~~~~DliINaT 81 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALYGY--AY--INSLE-------NQQADILVNVT 81 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHHTC--EE--ESCCT-------TCCCSEEEECS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHC--CCCEEEEecccHHHHHHHHHhhhh--hh--hhccc-------ccchhhheecc
Confidence 5689999996 66999999999997 54 799999999999999887642 22 22111 24689999997
Q ss_pred CC--CCCCc--hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHHH
Q 014177 117 GP--FQQAP--KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVAR 188 (429)
Q Consensus 117 gp--~~~~~--~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~~ 188 (429)
.. ..... ..++-...+..+.-.+|+...+.. ..+-..+++.|..++.| -.++..+++..+.
T Consensus 82 piGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P~~----T~ll~~A~~~G~~~i~G-------l~Mli~Qa~~~f~ 146 (167)
T d1npya1 82 SIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE----TPFIRYAQARGKQTISG-------AAVIVLQAVEQFE 146 (167)
T ss_dssp STTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSS----CHHHHHHHHTTCEEECH-------HHHHHHHHHHHHH
T ss_pred ccCCccccccccccccHhhcCCcceEEEEeeccCC----CHHHHHHHHCCCeEEEC-------HHHHHHHHHHHHH
Confidence 42 11110 012223445566667888765432 23456677888776444 2456666666543
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.94 E-value=5.6e-06 Score=70.62 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=60.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|+||.|+||||++|+.+++.|.+ +|.+++..+..+....+.+.+..+.........-.+.+ ++.+++|+|+.+++.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p~ 76 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKN-HPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALPA 76 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCST
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-CCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEcccc
Confidence 57999999999999999999987 68888877654433333333222111111122223433 344579999988642
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.. ....+. ...++..||+|++-
T Consensus 77 -~~--s~~~~~--~~~~~~VIDlSadf 98 (176)
T d1vkna1 77 -GA--SYDLVR--ELKGVKIIDLGADF 98 (176)
T ss_dssp -TH--HHHHHT--TCCSCEEEESSSTT
T ss_pred -HH--HHHHHH--hhccceEEecCccc
Confidence 21 122222 24678889999875
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.83 E-value=4.9e-05 Score=63.69 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=69.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|++|.++| .|.+|+.+++.|++. |++|.+.||+.++.+.+...- . ... ....+.++.+|+|+-|...
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~--g~~v~~~d~~~~~~~~~~~~~---~--~~~-----~~~~e~~~~~diii~~v~~ 67 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAG---A--SAA-----RSARDAVQGADVVISMLPA 67 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHTT---C--EEC-----SSHHHHHTSCSEEEECCSC
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHC--CCeEEEEECchhhhhhhhhhh---c--ccc-----chhhhhccccCeeeecccc
Confidence 57899998 799999999999997 899999999999887765431 1 111 1244567788888887643
Q ss_pred CCCCchHHHHH------HHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 119 FQQAPKCTVLE------AAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 119 ~~~~~~~~v~~------aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
... ...++. .....|.-++|.++... .....+.+..++.|+..+
T Consensus 68 ~~~--~~~v~~~~~~~~~~l~~g~iiid~st~~p--~~~~~~~~~~~~~gi~~~ 117 (162)
T d3cuma2 68 SQH--VEGLYLDDDGLLAHIAPGTLVLECSTIAP--TSARKIHAAARERGLAML 117 (162)
T ss_dssp HHH--HHHHHHSTTCHHHHSCTTCEEEECSCCCH--HHHHHHHHHHHHTTCEEE
T ss_pred hhh--HHHHHhccccccccCCCCCEEEECCCCCH--HHHHHHHHHHHHCCCcEE
Confidence 211 011211 11122444567665432 223344556666666544
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=97.81 E-value=6.8e-05 Score=63.02 Aligned_cols=114 Identities=15% Similarity=0.189 Sum_probs=78.1
Q ss_pred CeEEEEcCChHHHHH-HHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGS-TAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+||.|+| +|.+|+. ....|.+ .++.+++++++++++++.+.+.++. ... .+|.+++.+ .++|+|+-|..+
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~-~~~~~~~~~d~~~~~~~~~~~~~~~--~~~---~~~~~~ll~--~~iD~V~I~tp~ 72 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQ-WPDIELVLCTRNPKVLGTLATRYRV--SAT---CTDYRDVLQ--YGVDAVMIHAAT 72 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTT-STTEEEEEECSCHHHHHHHHHHTTC--CCC---CSSTTGGGG--GCCSEEEECSCG
T ss_pred eEEEEEc-CCHHHHHHHHHHHHh-CCCcEEEEEECCHHHHHHHHHhccc--ccc---cccHHHhcc--cccceecccccc
Confidence 5899999 5788876 5566655 5688999999999999998887652 111 133332222 379999988766
Q ss_pred CCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 119 FQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
... ..++..|++.|.|.+- ++.+. .....+.+.++++|..+..+
T Consensus 73 ~~H---~~~~~~al~~gk~V~~EKP~~~~~---~e~~~l~~~a~~~~~~~~vg 119 (167)
T d1xeaa1 73 DVH---STLAAFFLHLGIPTFVDKPLAASA---QECENLYELAEKHHQPLYVG 119 (167)
T ss_dssp GGH---HHHHHHHHHTTCCEEEESCSCSSH---HHHHHHHHHHHHTTCCEEEE
T ss_pred ccc---ccccccccccccccccCCCCcCCH---HHHHHHHHHHHHcCCEEEEE
Confidence 543 7889999999998652 22222 23445667778888887665
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.80 E-value=2e-05 Score=65.02 Aligned_cols=96 Identities=20% Similarity=0.188 Sum_probs=59.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHc--CCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKL--CPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~--~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|||.|+||||++|+.+++.|+++ +|..++.....+....+.. ....+ .....+..+.+ .++++|+||.|++
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~--~~~~~-~~~~~~~~~~~----~~~~~DvvF~alp 73 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP--NFGKD-AGMLHDAFDIE----SLKQLDAVITCQG 73 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC--CSSSC-CCBCEETTCHH----HHTTCSEEEECSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc--ccCCc-ceeeecccchh----hhccccEEEEecC
Confidence 58999999999999999988763 2445666554332211100 01111 11222333433 3578999999874
Q ss_pred CCCCCchHHHHHHHHHcCCc--EEEeCCCh
Q 014177 118 PFQQAPKCTVLEAAIETKTA--YIDVCDDT 145 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~--~vdis~~~ 145 (429)
. .. ...+.....+.|.+ .||.|++.
T Consensus 74 ~-~~--s~~~~~~l~~~g~~~~VIDlSsdf 100 (147)
T d1mb4a1 74 G-SY--TEKVYPALRQAGWKGYWIDAASTL 100 (147)
T ss_dssp H-HH--HHHHHHHHHHTTCCSEEEESSSTT
T ss_pred c-hH--HHHHhHHHHHcCCceEEEeCCccc
Confidence 2 21 25777788889876 78998764
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=97.78 E-value=0.00015 Score=61.76 Aligned_cols=120 Identities=18% Similarity=0.115 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEE
Q 014177 37 NRNARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLV 112 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvV 112 (429)
|++.||.|+| +|.+|+. .+..+.+.....+++ ++++++++++.+.+.++. ... ..| ++++++ ++|+|
T Consensus 1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~--~~~---~~~---~~ell~~~~id~v 71 (181)
T d1zh8a1 1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN--PAV---FDS---YEELLESGLVDAV 71 (181)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS--CEE---ESC---HHHHHHSSCCSEE
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccc--cce---eee---eecccccccccee
Confidence 4556899999 6899986 466776642235666 678999998888877752 111 134 344444 68999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
+-|..+... ..++..|+++|.|.+-=---..-......+.+.+++++..+.++
T Consensus 72 ~I~tp~~~h---~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~ 124 (181)
T d1zh8a1 72 DLTLPVELN---LPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIA 124 (181)
T ss_dssp EECCCGGGH---HHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEE
T ss_pred ecccccccc---ccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 988765433 68899999999877531100011234456677788888887665
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.77 E-value=3.2e-05 Score=68.80 Aligned_cols=68 Identities=29% Similarity=0.372 Sum_probs=53.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc------CccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR------DVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~------~~DvV 112 (429)
.|++|||||++.||+++++.|+++ |++|++.+|+.+. .+....++|+.+......+.. ..+.+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 69 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRREG---------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV 69 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCCS---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCccc---------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence 378999999999999999999998 8999999998764 246778899998776655543 44555
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
++.++
T Consensus 70 ~~~~~ 74 (241)
T d1uaya_ 70 VSAAG 74 (241)
T ss_dssp EECCC
T ss_pred hhhhh
Confidence 55543
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=97.76 E-value=0.00032 Score=58.45 Aligned_cols=112 Identities=14% Similarity=0.159 Sum_probs=76.7
Q ss_pred CeEEEEcCChHHHHH-HHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGS-TAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~-l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+||.|+| +|.+|+. ....|.. .++++++ ++|++.++++.+.+.++ +. ..+ +++++.+++|+|+-|..
T Consensus 2 iri~iIG-~G~~g~~~~~~~l~~-~~~~~i~~v~d~~~~~~~~~~~~~~--~~-----~~~--~~~~l~~~~D~V~I~tp 70 (164)
T d1tlta1 2 LRIGVVG-LGGIAQKAWLPVLAA-ASDWTLQGAWSPTRAKALPICESWR--IP-----YAD--SLSSLAASCDAVFVHSS 70 (164)
T ss_dssp EEEEEEC-CSTHHHHTHHHHHHS-CSSEEEEEEECSSCTTHHHHHHHHT--CC-----BCS--SHHHHHTTCSEEEECSC
T ss_pred CEEEEEc-CCHHHHHHHHHHHHh-CCCcEEEEEEechhHhhhhhhhccc--cc-----ccc--cchhhhhhccccccccc
Confidence 5899999 6889976 4566655 4677765 56899999888887764 22 222 24445678999998875
Q ss_pred CCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 118 PFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
+... ..++..|+++|.|.+- ++.+. .....+.+.++++|..+.++
T Consensus 71 ~~~h---~~~~~~al~~gk~V~~EKPla~~~---~e~~~l~~~a~~~~~~~~v~ 118 (164)
T d1tlta1 71 TASH---FDVVSTLLNAGVHVCVDKPLAENL---RDAERLVELAARKKLTLMVG 118 (164)
T ss_dssp TTHH---HHHHHHHHHTTCEEEEESSSCSSH---HHHHHHHHHHHHTTCCEEEE
T ss_pred chhc---cccccccccccceeeccccccCCH---HHHHHHHHHHHHcCCcEEEE
Confidence 5432 6889999999988652 22222 23445666778888877665
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.71 E-value=1.9e-05 Score=67.29 Aligned_cols=45 Identities=44% Similarity=0.646 Sum_probs=40.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG 86 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~ 86 (429)
|||.|+||+|.+|+++++.|++. |++|++.+|++++++.+.+++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~e~~~~l~~~i~ 45 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEYR 45 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH
Confidence 67999988999999999999997 8999999999999988877654
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.68 E-value=0.00011 Score=62.55 Aligned_cols=119 Identities=18% Similarity=0.135 Sum_probs=80.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.||.|+| +|.+|+..++.|.. .++.+|+ ++|+++++++.+.+..+- ...+ ..|.+++-+ -.++|+|+-+.
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~-~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~v~I~t 74 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHL-APNATISGVASRSLEKAKAFATANNYPESTKI----HGSYESLLE-DPEIDALYVPL 74 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHH-CTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCEEEECC
T ss_pred eEEEEEc-CCHHHHHHHHHHHh-CCCCEEEEEEeCCccccccchhccccccceee----cCcHHHhhh-ccccceeeecc
Confidence 5899999 58899999999877 4678877 568999988888776541 1121 134333322 13799999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCC
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGI 171 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~ 171 (429)
.+... ...+..|++.|.+.+- ++.+ ......+.+.+++++..+..+.-.
T Consensus 75 p~~~h---~~~~~~~l~~g~~v~~EKP~~~~---~~e~~~l~~~~~~~~~~~~v~~~~ 126 (184)
T d1ydwa1 75 PTSLH---VEWAIKAAEKGKHILLEKPVAMN---VTEFDKIVDACEANGVQIMDGTMW 126 (184)
T ss_dssp CGGGH---HHHHHHHHTTTCEEEECSSCSSS---HHHHHHHHHHHHTTTCCEEECCCG
T ss_pred cchhh---cchhhhhhhccceeecccccccC---HHHHHHHHHHHHhhCCEEEEEEee
Confidence 65443 6889999999988652 1222 224446667778888887666433
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.66 E-value=0.00016 Score=61.22 Aligned_cols=78 Identities=13% Similarity=0.083 Sum_probs=55.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.|+|.|+|+ |.+|..++..|.++ |++|.+.+|++++.+.+.+.-. +..+..........++.+.++++|+||
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~ii 77 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL 77 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECc-cHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEE
Confidence 379999995 99999999999997 8999999999998887765321 111111111111123567888999999
Q ss_pred ecCCCC
Q 014177 114 HAAGPF 119 (429)
Q Consensus 114 ~~agp~ 119 (429)
-+....
T Consensus 78 i~v~~~ 83 (184)
T d1bg6a2 78 IVVPAI 83 (184)
T ss_dssp ECSCGG
T ss_pred EEEchh
Confidence 987543
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.64 E-value=0.0002 Score=57.84 Aligned_cols=106 Identities=21% Similarity=0.226 Sum_probs=71.4
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~~ 120 (429)
||.|.|++|.+|+.+++.+.+. +++++...- |..+..+. ....++|+||...-|..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~-~~~~l~~~~----------------------d~~~~~~~-~~~~~~DvvIDFS~p~~ 56 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA-DDLTLSAEL----------------------DAGDPLSL-LTDGNTEVVIDFTHPDV 56 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-TTSEEEEEE----------------------CTTCCTHH-HHTTTCSEEEECCCTTT
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCCEEEEEE----------------------ecCCchhh-hccccCCEEEEcccHHH
Confidence 6999999999999999998874 577766532 11111110 11247999999987755
Q ss_pred CCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHH-HHHcCCcEEecCCCccch
Q 014177 121 QAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDR-AIAANIPAITTGGIYPGV 175 (429)
Q Consensus 121 ~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~-a~~~g~~~i~~~g~~pG~ 175 (429)
. ...++.|++.|++.|- +++.+.. +...+.+. +.++.++++...-++.|+
T Consensus 57 ~---~~~~~~~~~~~~~~Vi--GTTG~~~~~~~~l~~~~~~~~~ipil~apNfSlGv 108 (135)
T d1yl7a1 57 V---MGNLEFLIDNGIHAVV--GTTGFTAERFQQVESWLVAKPNTSVLIAPNFTSFV 108 (135)
T ss_dssp H---HHHHHHHHHTTCEEEE--CCCCCCHHHHHHHHHHHHSCTTCEEEECSCCGGGH
T ss_pred H---HHHHHHHHhcCCCEEE--eccccchhHHHHHHHHHHhcCCCCEEEcCCccHHH
Confidence 4 7889999999999874 2333322 22334332 235678899888888886
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.63 E-value=7.8e-05 Score=62.32 Aligned_cols=110 Identities=19% Similarity=0.197 Sum_probs=70.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|||.|+| .|.+|+.+++.|++. |++|++.||++++.+.+.+.. ... .. +..++++++|+||-|....
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~---~~~----~~---~~~e~~~~~d~ii~~v~~~ 67 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAG---AET----AS---TAKAIAEQCDVIITMLPNS 67 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTT---CEE----CS---SHHHHHHHCSEEEECCSSH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHhh---hhh----cc---cHHHHHhCCCeEEEEcCCH
Confidence 5799999 799999999999997 899999999999988887532 211 12 2455677899999887421
Q ss_pred CCCchHHHHH---HHH---HcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 120 QQAPKCTVLE---AAI---ETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 120 ~~~~~~~v~~---aa~---~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
.. ...++. ... +.|.-.||.++... .....+.+..++.|+..+
T Consensus 68 ~~--v~~v~~~~~~~~~~~~~g~iiid~sT~~p--~~~~~~~~~~~~~g~~~v 116 (161)
T d1vpda2 68 PH--VKEVALGENGIIEGAKPGTVLIDMSSIAP--LASREISDALKAKGVEML 116 (161)
T ss_dssp HH--HHHHHHSTTCHHHHCCTTCEEEECSCCCH--HHHHHHHHHHHTTTCEEE
T ss_pred HH--HHHHHhCCcchhhccCCCCEEEECCCCCH--HHHHHHHHHHHHcCCcee
Confidence 10 112221 111 23445677775443 222344455566666543
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.62 E-value=5.5e-05 Score=57.18 Aligned_cols=91 Identities=19% Similarity=0.157 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
++++|+|+|+|. |-.|..+++.|.++ +++|++.|.+..... .+.+........... +. ..+.++|.||-.
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~--g~~v~~~D~~~~~~~--~~~~~~~~~~~~~~~-~~----~~~~~~d~vi~S 71 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLAR--GVTPRVMDTRMTPPG--LDKLPEAVERHTGSL-ND----EWLMAADLIVAS 71 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHT--TCCCEEEESSSSCTT--GGGSCTTSCEEESBC-CH----HHHHHCSEEEEC
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHC--CCEEEEeeCCcCchh--HHHHhhccceeeccc-ch----hhhccCCEEEEC
Confidence 478899999995 77999999999998 899999997554211 122223344443332 22 234578999987
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
-|.... .++++.|.+.|++.|
T Consensus 72 PGi~~~---~~~~~~a~~~gi~ii 92 (93)
T d2jfga1 72 PGIALA---HPSLSAAADAGIEIV 92 (93)
T ss_dssp TTSCTT---SHHHHHHHHTTCEEE
T ss_pred CCCCCC---CHHHHHHHHcCCCeE
Confidence 664333 478899999998765
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.61 E-value=7.6e-05 Score=61.42 Aligned_cols=74 Identities=23% Similarity=0.290 Sum_probs=52.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
+++||.|+|+ |.+|+.++..|+.++-..++++.|+++++++..+.++. ........| .+ .++++|+
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~----~~~~adi 75 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YS----DCKDADL 75 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GG----GGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HH----HhccccE
Confidence 3579999995 99999999999997433589999999887665443321 223333333 32 3579999
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
||.++|..
T Consensus 76 vvitag~~ 83 (146)
T d1ez4a1 76 VVITAGAP 83 (146)
T ss_dssp EEECCCC-
T ss_pred EEEecccc
Confidence 99999854
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.60 E-value=0.00012 Score=61.11 Aligned_cols=102 Identities=24% Similarity=0.316 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++.+|+|+|+ |.+|.+.++..... |.+|.+.|.+.++++++...+..+++.. ..+.+.+.+.++++|+||.++
T Consensus 30 v~pa~V~ViGa-GvaG~~A~~~A~~l--GA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aa 103 (168)
T d1pjca1 30 VKPGKVVILGG-GVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAV 103 (168)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECC
T ss_pred CCCcEEEEECC-ChHHHHHHHHHhhC--CCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEee
Confidence 35679999995 99999999999887 8999999999999999888776555444 345678999999999999998
Q ss_pred CCCCCC----chHHHHHHHHHcCCcEEEeCCCh
Q 014177 117 GPFQQA----PKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 117 gp~~~~----~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
-..... -+...++ ..+.|.-.||++-+.
T Consensus 104 lipG~~aP~lIt~~mv~-~Mk~GSVIVDvaidq 135 (168)
T d1pjca1 104 LVPGRRAPILVPASLVE-QMRTGSVIVDVAVDQ 135 (168)
T ss_dssp CCTTSSCCCCBCHHHHT-TSCTTCEEEETTCTT
T ss_pred ecCCcccCeeecHHHHh-hcCCCcEEEEeecCC
Confidence 533221 1123332 235677788887654
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=97.59 E-value=0.00046 Score=60.63 Aligned_cols=140 Identities=14% Similarity=0.046 Sum_probs=87.9
Q ss_pred CCCeEEEEcCChHHHH-HHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEE
Q 014177 38 RNARVLVLGGTGRVGG-STAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVV 113 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi 113 (429)
+.-+|.|+| +|.+|+ +.+..+.. .++.+|+ ++|+++++++.+.+.++-.... ....+|. +++++ ++|+|+
T Consensus 32 ~~iriaiIG-~G~~~~~~~~~~~~~-~~~~~ivav~d~~~~~a~~~~~~~~i~~~~-~~~~~d~---~ell~~~~iD~V~ 105 (221)
T d1h6da1 32 RRFGYAIVG-LGKYALNQILPGFAG-CQHSRIEALVSGNAEKAKIVAAEYGVDPRK-IYDYSNF---DKIAKDPKIDAVY 105 (221)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHTTT-CSSEEEEEEECSCHHHHHHHHHHTTCCGGG-EECSSSG---GGGGGCTTCCEEE
T ss_pred CCEEEEEEc-CcHHHHHHHHHHHHh-CCCceEEEEecCCHHHHHHHHHhhcccccc-ccccCch---hhhcccccceeee
Confidence 345899999 588997 56666665 4678877 6799999999888876411111 1123443 34554 689999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHH
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRV 186 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~ 186 (429)
-+..+... ..++..|+++|.+.+-=---..-......+.+.++++++.+.++...-+.........+.+.
T Consensus 106 I~tp~~~H---~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~li~~ 175 (221)
T d1h6da1 106 IILPNSLH---AEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYNQFSAQLDHLAEA 175 (221)
T ss_dssp ECSCGGGH---HHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHH
T ss_pred eccchhhh---hhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCcEEEeeccccCHHHHHHHHHHHh
Confidence 88766543 68889999999887521100111223446667778888888777554443333344556554
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.59 E-value=6.1e-06 Score=70.55 Aligned_cols=133 Identities=16% Similarity=0.254 Sum_probs=78.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----CC-cEEEEeeCCChHHHHHHhcCcc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----KN-SEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----~~-v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
++++|+|+|+|+ |.++++++..|.+. + +|.+++|+.++++.+.+.+. .. ...+ +..+ +.....+.|
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~--~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~d 85 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV--KFSG---LDVDLDGVD 85 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE--EEEC---TTCCCTTCC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHccc--c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhh--hhhh---hhhccchhh
Confidence 478899999996 66999999999764 5 89999999999988876553 11 1111 1111 223355799
Q ss_pred EEEecCCCCCC--CchHHHHH-HHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHHHH
Q 014177 111 LVVHAAGPFQQ--APKCTVLE-AAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVRVA 187 (429)
Q Consensus 111 vVi~~agp~~~--~~~~~v~~-aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~~~ 187 (429)
++|||...... ......+. .....+.-.+|+...+.. ..+...+++.|..++.| + .++..+++.++
T Consensus 86 liIn~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~p~~----T~l~~~a~~~G~~~i~G------l-~MLv~Qa~~qf 154 (177)
T d1nvta1 86 IIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLE----TVLLKEAKKVNAKTING------L-GMLIYQGAVAF 154 (177)
T ss_dssp EEEECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCSSSS----CHHHHHHHTTTCEEECT------H-HHHHHHHHHHH
T ss_pred hhccCCcccccccccccchhhhhccCcccceeeecCCcHh----HHHHHHHHHCCCcccCC------H-HHHHHHHHHHH
Confidence 99999743211 00000011 011223344576654422 23445667778776543 3 55666666654
Q ss_pred H
Q 014177 188 R 188 (429)
Q Consensus 188 ~ 188 (429)
.
T Consensus 155 ~ 155 (177)
T d1nvta1 155 K 155 (177)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.58 E-value=0.00084 Score=54.74 Aligned_cols=79 Identities=22% Similarity=0.204 Sum_probs=52.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
.||.|+||+|.+|+.++..|..++---++++.|.+..+.+.+--.....+.....-+ ...+..+.++++|+||.++|..
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivVitag~~ 79 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLKGCDVVVIPAGVP 79 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEEECCSCC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhCCCCEEEECCCcC
Confidence 379999999999999999998863324899999887665543211111111122222 2344567789999999999853
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.55 E-value=1.6e-05 Score=66.31 Aligned_cols=95 Identities=21% Similarity=0.246 Sum_probs=59.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcC-CCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLC-PDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
.+|.|+||||++|..+++.|.++. |..++.....+....+.+.. ..-.....+..+ ..+.+.|+++.+++.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~---~~~~~~~~~~~~-----~~~~~~d~~f~~~~~ 73 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF---KDQDITIEETTE-----TAFEGVDIALFSAGS 73 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEE---TTEEEEEEECCT-----TTTTTCSEEEECSCH
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccc---cCCcccccccch-----hhhhhhhhhhhccCc
Confidence 489999999999999999987742 34556555433222111100 011122233322 234579999988765
Q ss_pred CCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 119 FQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
... ........+.|+..||.|++-
T Consensus 74 ~~s---~~~~~~~~~~~~~VIDlSsdf 97 (154)
T d2gz1a1 74 STS---AKYAPYAVKAGVVVVDNTSYF 97 (154)
T ss_dssp HHH---HHHHHHHHHTTCEEEECSSTT
T ss_pred cch---hhHHhhhccccceehhcChhh
Confidence 332 566777888999999999875
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.52 E-value=8.4e-06 Score=68.60 Aligned_cols=136 Identities=18% Similarity=0.196 Sum_probs=79.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
..||.|.|++|.+|+.+++.+.+. ++++++.+ +|.... .+-..++.-......++.-.+++.+.++.+|+||...-
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~~~--~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~ 80 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSS--LLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR 80 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCT--TCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecccch--hccchhhhhhccccCCceeeccHHHHhcccceEEEecc
Confidence 468999999999999999999884 57776543 332211 00000000000000111111223456778999999876
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEeCCChhHHH-HHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHH
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQ-RAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELV 184 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~-~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~ 184 (429)
|.. ....++.|.+.+++.|-=++ .+.. +...+.+.+ +.++++...-++.|+.+++...+.
T Consensus 81 p~~---~~~~~~~a~~~~~~~ViGTT--G~~~~~~~~i~~~a--~~ipi~~apN~SlGi~~~~~~~~~ 141 (162)
T d1diha1 81 PEG---TLNHLAFCRQHGKGMVIGTT--GFDEAGKQAIRDAA--ADIAIVFAANFSMTFANGAVRSAL 141 (162)
T ss_dssp HHH---HHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHT--TTSCEEECSCCCHHHHHHHHHHHH
T ss_pred HHH---HHHHHHHHHhccceeEEecC--CCcHHHHHHHHHHc--CCCCEEEEccccHHHHHHHHHHHH
Confidence 643 37889999999999984332 2222 222333322 347888888888887655444333
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.00025 Score=58.41 Aligned_cols=116 Identities=15% Similarity=0.125 Sum_probs=77.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH-hCCCcEEEEeeCCChHHHHHH-hcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST-LGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~-l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~ag 117 (429)
-+|+|+| +|.+|+.+++.|.++ +.++++++.++++.....+. ...++.++.+|.+|++.++++ ++++|.||-+.+
T Consensus 4 nHiII~G-~g~~g~~l~~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 4 DHFIVCG-HSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHc--CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 3689998 599999999999997 78999999998765544443 335689999999999988775 558999998764
Q ss_pred CCCCCchHHHHHHHHHcC--CcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 118 PFQQAPKCTVLEAAIETK--TAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~g--v~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
-- ..+..+...+.+.+ ++.+-...+..+. +..++.|+..++
T Consensus 81 ~d--~~n~~~~~~~r~~~~~~~iia~~~~~~~~-------~~l~~~Gad~vi 123 (153)
T d1id1a_ 81 ND--ADNAFVVLSAKDMSSDVKTVLAVSDSKNL-------NKIKMVHPDIIL 123 (153)
T ss_dssp CH--HHHHHHHHHHHHHTSSSCEEEECSSGGGH-------HHHHTTCCSEEE
T ss_pred cH--HHHHHHHHHHHHhCCCCceEEEEcCHHHH-------HHHHHCCCCEEE
Confidence 21 11233444455543 3444444444332 233456665544
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.46 E-value=0.00031 Score=59.34 Aligned_cols=118 Identities=10% Similarity=0.092 Sum_probs=79.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
.+|.|+| .|.+|+.+++.|++. |++|++.||++++.+.+.+.-..... .......+++.+.+..+|.++-+....
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~--~~~a~~~~~~~~~~~~~~~ii~~~~~~ 77 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTK--VLGAHSLEEMVSKLKKPRRIILLVKAG 77 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSS--CEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CcEEEEe-EhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHhcccccc--ccchhhhhhhhhhhcccceEEEecCch
Confidence 5799999 699999999999997 89999999999999988764321111 112456677888888999999887432
Q ss_pred CCCchHHHHHHHH---HcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 120 QQAPKCTVLEAAI---ETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 120 ~~~~~~~v~~aa~---~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
. ....+.+... +.|.-+||.++.... ....+.+...+.|+..+
T Consensus 78 ~--~v~~v~~~l~~~~~~g~iiid~sT~~~~--~~~~~~~~~~~~g~~~l 123 (176)
T d2pgda2 78 Q--AVDNFIEKLVPLLDIGDIIIDGGNSEYR--DTMRRCRDLKDKGILFV 123 (176)
T ss_dssp H--HHHHHHHHHHHHCCTTCEEEECSCCCHH--HHHHHHHHHHHTTCEEE
T ss_pred H--HHHHHHHHHHhccccCcEEEecCcchhH--HHHHHHHHHHhcCCcee
Confidence 1 1123333333 235567888754432 22344556667776654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.41 E-value=0.00029 Score=57.94 Aligned_cols=80 Identities=19% Similarity=0.218 Sum_probs=56.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+.++++|.|+||.|.+|+.+++.|.+. |++|.+.||+..... +....++|.++.+
T Consensus 6 ~~~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~~~~~~-----------------------~~~~~~~~~v~~~ 60 (152)
T d2pv7a2 6 NSDIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAVA-----------------------ESILANADVVIVS 60 (152)
T ss_dssp CTTCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGGH-----------------------HHHHTTCSEEEEC
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEeccccccccc-----------------------chhhhhccccccc
Confidence 467789999999999999999999987 899999998765322 2345678888888
Q ss_pred CCCCCCCchHHHHHHHHH---cCCcEEEeCC
Q 014177 116 AGPFQQAPKCTVLEAAIE---TKTAYIDVCD 143 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~---~gv~~vdis~ 143 (429)
+.+... ..+++.... .+.-.+|+++
T Consensus 61 ~~~~~~---~~v~~~~~~~~~~~~iiiD~~S 88 (152)
T d2pv7a2 61 VPINLT---LETIERLKPYLTENMLLADLTS 88 (152)
T ss_dssp SCGGGH---HHHHHHHGGGCCTTSEEEECCS
T ss_pred cchhhh---eeeeecccccccCCceEEEecc
Confidence 754322 344444332 2344566654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.41 E-value=0.00015 Score=59.88 Aligned_cols=68 Identities=15% Similarity=0.295 Sum_probs=54.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|||.++| +|.+|+++++.|.+. ++++++.+|+.++.+++.++++..+ ..+ .+++++++|+||-|.-|.
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~--~~~i~v~~r~~~~~~~l~~~~g~~~------~~~---~~~~~~~~dvIilavkp~ 68 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLALPY------AMS---HQDLIDQVDLVILGIKPQ 68 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHTCCB------CSS---HHHHHHTCSEEEECSCGG
T ss_pred CEEEEEe-ccHHHHHHHHHHHhC--CCeEEEEcChHHhHHhhccccceee------ech---hhhhhhccceeeeecchH
Confidence 6899999 699999999999986 7899999999999998887765221 123 455677999999998664
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.40 E-value=0.00025 Score=58.33 Aligned_cols=76 Identities=34% Similarity=0.335 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
..++||.|+|+ |.+|+.++..|..++-..++++.|+++++++..+.++. ..+..... |. +.++++
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---d~----~~l~da 75 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG---DY----DDCRDA 75 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEEC---CG----GGTTTC
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEEC---CH----HHhccc
Confidence 34578999996 99999999999987434489999999888665544432 12333322 33 347799
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+||.++|...
T Consensus 76 Dvvvitag~~~ 86 (148)
T d1ldna1 76 DLVVICAGANQ 86 (148)
T ss_dssp SEEEECCSCCC
T ss_pred eeEEEeccccc
Confidence 99999998543
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.37 E-value=0.0003 Score=58.55 Aligned_cols=83 Identities=19% Similarity=0.144 Sum_probs=56.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhc
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
.+...+..||.|+|+ |.+|+.++..|..++---++++.|+++++++..+.++. .+.... .-..|.+ .++
T Consensus 14 ~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~-~~~~d~~----~~~ 87 (160)
T d1i0za1 14 EEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI-VADKDYS----VTA 87 (160)
T ss_dssp SCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEE-EECSSGG----GGT
T ss_pred ccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeE-Eeccchh----hcc
Confidence 334466789999995 99999999999987433489999999887765544332 111111 2223333 467
Q ss_pred CccEEEecCCCCCC
Q 014177 108 DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 ~~DvVi~~agp~~~ 121 (429)
++|+||.+||....
T Consensus 88 ~adiVVitAg~~~~ 101 (160)
T d1i0za1 88 NSKIVVVTAGVRQQ 101 (160)
T ss_dssp TCSEEEECCSCCCC
T ss_pred cccEEEEecCCccc
Confidence 99999999986543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.36 E-value=0.0002 Score=59.84 Aligned_cols=67 Identities=19% Similarity=0.196 Sum_probs=49.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|||.|+| .|.+|+.+++.|.+. |++|++.||+++.+++..+.- .+... .| + .+.++++|+||-+..+
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~--g~~V~~~d~~~~~~~~a~~~~--~~~~~-~~--~----~~~~~~~DiIilavp~ 67 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQ--LVDEA-GQ--D----LSLLQTAKIIFLCTPI 67 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTT--SCSEE-ES--C----GGGGTTCSEEEECSCH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHhh--cccee-ee--e----cccccccccccccCcH
Confidence 6899998 699999999999987 899999999988877655421 11111 11 1 1356799999987643
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.35 E-value=0.00021 Score=59.97 Aligned_cols=95 Identities=18% Similarity=0.052 Sum_probs=59.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
||+|+|+| .|.+|..+++.|.+.+...+|+..|++++.++...+.- .+....-+. + .....++|+||-|..+
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~--~~~~~~~~~---~--~~~~~~~dlIila~p~ 72 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG--IIDEGTTSI---A--KVEDFSPDFVMLSSPV 72 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT--SCSEEESCG---G--GGGGTCCSEEEECSCH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh--cchhhhhhh---h--hhhccccccccccCCc
Confidence 57899998 69999999999998755568999999988877665431 122222221 1 1223479999988765
Q ss_pred CCCCchHHHHHHHHH---cCCcEEEeCCC
Q 014177 119 FQQAPKCTVLEAAIE---TKTAYIDVCDD 144 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~---~gv~~vdis~~ 144 (429)
... .++++.... .+.-.+|+++.
T Consensus 73 ~~~---~~vl~~l~~~~~~~~ii~d~~s~ 98 (171)
T d2g5ca2 73 RTF---REIAKKLSYILSEDATVTDQGSV 98 (171)
T ss_dssp HHH---HHHHHHHHHHSCTTCEEEECCSC
T ss_pred hhh---hhhhhhhhccccccccccccccc
Confidence 322 344443322 23334555543
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.34 E-value=0.00052 Score=56.12 Aligned_cols=78 Identities=22% Similarity=0.273 Sum_probs=51.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCcc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
|||.|+||+|.+|+.++..|..++---++.+.|++++ +++..+.++. .+.+....--.|. +.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence 5799999999999999999988632248999998763 3333322221 2233322222232 3577999
Q ss_pred EEEecCCCCCC
Q 014177 111 LVVHAAGPFQQ 121 (429)
Q Consensus 111 vVi~~agp~~~ 121 (429)
+||-+||....
T Consensus 77 vVVitAG~~~~ 87 (145)
T d1hyea1 77 VVIITSGVPRK 87 (145)
T ss_dssp EEEECCSCCCC
T ss_pred EEEEecccccC
Confidence 99999986443
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.33 E-value=2.2e-05 Score=67.34 Aligned_cols=101 Identities=18% Similarity=0.240 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
.++.||.|+||||++|+.+++.|.+ +|.+++..+..+....+.+.+..+... ..-+..........+.++|+|+.++
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~-HP~~ei~~l~S~~~aG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dvvf~al 79 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLAN-HPQFRIKVMTADRKAGEQFGSVFPHLI--TQDLPNLVAVKDADFSNVDAVFCCL 79 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTT-CSSEEEEEEECSTTTTSCHHHHCGGGT--TSCCCCCBCGGGCCGGGCSEEEECC
T ss_pred CCccEEEEECcccHHHHHHHHHHHh-CCCceEEEEeccccCCCcccccccccc--ccccccchhhhhhhhcccceeeecc
Confidence 4567999999999999999999998 688888776543333233322211000 0001111111223356899999886
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+. .. ...++.. +......+|.+++
T Consensus 80 p~-~~--s~~~~~~-l~~~~~~v~~~~~ 103 (183)
T d2cvoa1 80 PH-GT--TQEIIKG-LPQELKIVDLSAD 103 (183)
T ss_dssp SS-SH--HHHHHHT-SCSSCEEEECSST
T ss_pred cc-ch--HHHHHHH-HHhcCcccccchh
Confidence 42 21 1334433 3344566776654
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.31 E-value=0.00024 Score=60.43 Aligned_cols=74 Identities=22% Similarity=0.195 Sum_probs=53.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH---HHHHHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG---SLLMALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~---~l~~~~~--~~DvV 112 (429)
++.+|+|+||+|.+|..+++..... |++|+..++++++.+.+.+ ++. ..+ +|..+.+ .+.+... ++|+|
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~-~Ga--~~v-i~~~~~~~~~~~~~~~~~~Gvd~v 102 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQ-IGF--DAA-FNYKTVNSLEEALKKASPDGYDCY 102 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH-TTC--SEE-EETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHHHHHHHHh-hhh--hhh-cccccccHHHHHHHHhhcCCCcee
Confidence 3579999999999999999988876 8999999999888766554 332 222 3444433 3333333 79999
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
|++.|
T Consensus 103 ~D~vG 107 (182)
T d1v3va2 103 FDNVG 107 (182)
T ss_dssp EESSC
T ss_pred EEecC
Confidence 99987
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.31 E-value=0.00025 Score=59.05 Aligned_cols=77 Identities=17% Similarity=0.143 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhcCc
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
.++..||.|+|+ |.+|+.++..|..++-..++++.|++.++++..+.++. .....+.. .|. +.++++
T Consensus 16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~----~~~~~a 88 (159)
T d2ldxa1 16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDY----NVSANS 88 (159)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSG----GGGTTE
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cch----hhhccc
Confidence 456678999995 99999999999887434489999999887765544432 11122222 233 245799
Q ss_pred cEEEecCCCC
Q 014177 110 DLVVHAAGPF 119 (429)
Q Consensus 110 DvVi~~agp~ 119 (429)
|+||.++|..
T Consensus 89 divvitag~~ 98 (159)
T d2ldxa1 89 KLVIITAGAR 98 (159)
T ss_dssp EEEEECCSCC
T ss_pred cEEEEecccc
Confidence 9999999754
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.30 E-value=0.00087 Score=52.14 Aligned_cols=96 Identities=19% Similarity=0.144 Sum_probs=65.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
++++++|+|+|+ |.+|..-++.|++. |.+|++.+..... ...+.+. .++++..-+..+. -+.++++|+.
T Consensus 9 ~l~~k~vlVvG~-G~va~~ka~~ll~~--ga~v~v~~~~~~~~~~~~~~~--~~i~~~~~~~~~~-----dl~~~~lv~~ 78 (113)
T d1pjqa1 9 QLRDRDCLIVGG-GDVAERKARLLLEA--GARLTVNALTFIPQFTVWANE--GMLTLVEGPFDET-----LLDSCWLAIA 78 (113)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHT--TBEEEEEESSCCHHHHHHHTT--TSCEEEESSCCGG-----GGTTCSEEEE
T ss_pred EeCCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeccCChHHHHHHhc--CCceeeccCCCHH-----HhCCCcEEee
Confidence 467899999995 88999999999997 8999998765542 2233321 4577777666543 3668999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+.+.... +..+.+.|.+.|+. |.+.++
T Consensus 79 at~d~~~--n~~i~~~a~~~~il-VNv~D~ 105 (113)
T d1pjqa1 79 ATDDDTV--NQRVSDAAESRRIF-CNVVDA 105 (113)
T ss_dssp CCSCHHH--HHHHHHHHHHTTCE-EEETTC
T ss_pred cCCCHHH--HHHHHHHHHHcCCE-EEeCCC
Confidence 7643211 25777888877754 444433
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.29 E-value=0.00038 Score=58.56 Aligned_cols=93 Identities=19% Similarity=0.225 Sum_probs=61.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+.+|+|+||+|.+|...++.+... |.+|++.++++++.+.+. +++. +. ..|..+...-....+++|+||++.|
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~~~~~~~-~lGa--~~-~i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPL-ALGA--EE-AATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHH-HTTC--SE-EEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CCCEEEEEeccccchhhhhhhhccc--cccccccccccccccccc-cccc--ce-eeehhhhhhhhhccccccccccccc
Confidence 4578999999999999999988776 889999999888876554 4542 22 2355553322233458999999987
Q ss_pred CCCCCchHHHHHHHHHcCCcEEEe
Q 014177 118 PFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
... ...+ .|++.+-+++.+
T Consensus 101 ~~~----~~~~-~~l~~~G~~v~~ 119 (171)
T d1iz0a2 101 KEV----EESL-GLLAHGGRLVYI 119 (171)
T ss_dssp TTH----HHHH-TTEEEEEEEEEC
T ss_pred hhH----HHHH-HHHhcCCcEEEE
Confidence 421 1222 244445456654
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.00074 Score=56.70 Aligned_cols=74 Identities=18% Similarity=0.205 Sum_probs=53.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHH---Hhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLM---ALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~---~~~--~~DvV 112 (429)
.+.+|||+||+|.+|...++.+... |+++++.++++++.+.+ .+++. + ..+|.++.+-.++ ... ++|+|
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~~~~~~~-~~~Ga--~-~vi~~~~~~~~~~i~~~t~~~g~d~v 101 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIV-LQNGA--H-EVFNHREVNYIDKIKKYVGEKGIDII 101 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH-HHTTC--S-EEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEecccccccccccccccc--Ccccccccccccccccc-cccCc--c-cccccccccHHHHhhhhhccCCceEE
Confidence 3568999999999999999988776 89999999888776554 44542 2 2357766543333 322 68999
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
++++|
T Consensus 102 ~d~~g 106 (174)
T d1yb5a2 102 IEMLA 106 (174)
T ss_dssp EESCH
T ss_pred eeccc
Confidence 99986
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.25 E-value=0.00017 Score=60.86 Aligned_cols=100 Identities=20% Similarity=0.130 Sum_probs=65.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCC-----------ChHHHHHH
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIY-----------NEGSLLMA 105 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~-----------d~~~l~~~ 105 (429)
|++||.|.| .|.||+.+++.|.++ ++.+++.+ +.++..........+ ......+-. ....+..+
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~-~dieiVaINd~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELG--IPVYAASEEFIPRFEKEGFEVAGTLNDL 76 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTT--CCEEESSGGGHHHHHHHTCCCSCBHHHH
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhC-CCceEEEEecCCChHHHHHhhhcC--ceeecccccceeeecccCccccchhhhh
Confidence 457999999 799999999999885 67887765 444443322222221 222221111 11134444
Q ss_pred hcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 106 LRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 106 ~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
.+++|+||-|.|.|.. ..-++..+++|++.|.+++.
T Consensus 77 ~~~vDvViEcTG~f~~---~~~~~~hl~~G~k~Vi~s~~ 112 (172)
T d2czca2 77 LEKVDIIVDATPGGIG---AKNKPLYEKAGVKAIFQGGE 112 (172)
T ss_dssp HTTCSEEEECCSTTHH---HHHHHHHHHHTCEEEECTTS
T ss_pred hccCCEEEECCCCCCC---HHHHHHHHHcCCCEEEECCC
Confidence 5689999999998754 56677889999999988764
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.21 E-value=0.00025 Score=58.40 Aligned_cols=90 Identities=17% Similarity=0.177 Sum_probs=60.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGPF 119 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp~ 119 (429)
|||.|+| .|.+|+.+++.|+++ ++++++.+++..+.......- +.. .+ +..++++++|+||-|..+.
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~---~~~--~~-----~~~e~~~~~diIi~~v~~~ 67 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERART---VGV--TE-----TSEEDVYSCPVVISAVTPG 67 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHH---HTC--EE-----CCHHHHHTSSEEEECSCGG
T ss_pred CEEEEEc-HHHHHHHHHHHHHHC--CCeEEEEcCchhHHHHHhhhc---ccc--cc-----cHHHHHhhcCeEEEEecCc
Confidence 6899998 799999999999997 889999988776654443321 111 11 1345678999999998653
Q ss_pred CCCchHHHHHHHHH-cCCcEEEeCCCh
Q 014177 120 QQAPKCTVLEAAIE-TKTAYIDVCDDT 145 (429)
Q Consensus 120 ~~~~~~~v~~aa~~-~gv~~vdis~~~ 145 (429)
.. ..+++.+.. .+..++|+++..
T Consensus 68 ~~---~~~~~~~~~~~~~~~id~st~~ 91 (152)
T d1i36a2 68 VA---LGAARRAGRHVRGIYVDINNIS 91 (152)
T ss_dssp GH---HHHHHHHHTTCCSEEEECSCCC
T ss_pred hH---HHHHHhhcccCCceeeccCcCC
Confidence 22 344443332 345567777554
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.20 E-value=0.00027 Score=59.85 Aligned_cols=94 Identities=18% Similarity=0.187 Sum_probs=62.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH---HHHHHh--cCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG---SLLMAL--RDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~---~l~~~~--~~~DvVi 113 (429)
+.+|||+||+|.+|..+++.+... +.++++..++.++.+.+. +++ .+ ...|..+.+ .+.+.. +++|+||
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~~~~~~l~-~~G--a~-~vi~~~~~~~~~~v~~~t~~~g~d~v~ 99 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS-RLG--VE-YVGDSRSVDFADEILELTDGYGVDVVL 99 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH-TTC--CS-EEEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEECCCCCcccccchhhccc--cccceeeecccccccccc-ccc--cc-ccccCCccCHHHHHHHHhCCCCEEEEE
Confidence 468999999999999999988776 789999999888876554 443 22 234666544 333333 2699999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
+++|... ....-.|++.+-+++.+.
T Consensus 100 d~~g~~~----~~~~~~~l~~~G~~v~~G 124 (183)
T d1pqwa_ 100 NSLAGEA----IQRGVQILAPGGRFIELG 124 (183)
T ss_dssp ECCCTHH----HHHHHHTEEEEEEEEECS
T ss_pred ecccchH----HHHHHHHhcCCCEEEEEc
Confidence 9987311 222223444455666654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.18 E-value=9e-05 Score=63.75 Aligned_cols=77 Identities=19% Similarity=0.208 Sum_probs=55.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcEEEEeeCCChHHHHHHhcCccE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
|.|+||.|+| +|..|++++..|.+. +++|++.+|+++..+.+.+.-. +.+.+ .-++.-..+++++++++|+
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~--g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~ 80 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEI 80 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSC
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHc--CCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCE
Confidence 5667899999 599999999999986 7899999999998887765321 11111 0011111236778889999
Q ss_pred EEecCC
Q 014177 112 VVHAAG 117 (429)
Q Consensus 112 Vi~~ag 117 (429)
||-+..
T Consensus 81 iiiavP 86 (189)
T d1n1ea2 81 ILFVIP 86 (189)
T ss_dssp EEECSC
T ss_pred EEEcCc
Confidence 998864
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.17 E-value=0.00051 Score=56.23 Aligned_cols=72 Identities=22% Similarity=0.221 Sum_probs=51.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
|||.|+|+ |.+|+.++..|+.++-..++++.|+++++++....++. ....... .|.+ .++++|+|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~----~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWA----ALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGG----GGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHH----HhccccEE
Confidence 68999995 99999999999887433589999999887665443331 1223322 3333 36799999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
|-++|..
T Consensus 74 VitaG~~ 80 (146)
T d1hyha1 74 ISTLGNI 80 (146)
T ss_dssp EECCSCG
T ss_pred EEecccc
Confidence 9999843
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.15 E-value=0.00081 Score=53.67 Aligned_cols=69 Identities=16% Similarity=0.229 Sum_probs=52.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|||.|.|++|.+|+.+++.+.++ +++++.. +++. . +.++++|+||....|
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~~id~~~-----------------------~----~~~~~~DVvIDFS~p 51 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVLKVDVNG-----------------------V----EELDSPDVVIDFSSP 51 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEETTE-----------------------E----EECSCCSEEEECSCG
T ss_pred CEEEEECCCCHHHHHHHHHHhcC--CCeEEEEECCCc-----------------------H----HHhccCCEEEEecCH
Confidence 58999999999999999888775 6776643 2211 0 123579999999877
Q ss_pred CCCCchHHHHHHHHHcCCcEEE
Q 014177 119 FQQAPKCTVLEAAIETKTAYID 140 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~gv~~vd 140 (429)
... ...++.|.+++++.|-
T Consensus 52 ~~~---~~~l~~~~~~~~p~Vi 70 (128)
T d1vm6a3 52 EAL---PKTVDLCKKYRAGLVL 70 (128)
T ss_dssp GGH---HHHHHHHHHHTCEEEE
T ss_pred HHH---HHHHHHHHhcCCCEEE
Confidence 543 7899999999999873
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.15 E-value=0.00061 Score=55.33 Aligned_cols=74 Identities=26% Similarity=0.281 Sum_probs=52.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
|||.|+|+ |.+|+.++..|+.++-..++++.|+++++++....++. .+..... .|. +.++++|+||
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~---~~~----~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccC---CcH----HHhcCCCEEE
Confidence 68999996 89999999999887444589999999887665443321 2333332 232 3478999999
Q ss_pred ecCCCCCC
Q 014177 114 HAAGPFQQ 121 (429)
Q Consensus 114 ~~agp~~~ 121 (429)
.++|....
T Consensus 73 itag~~~~ 80 (140)
T d1a5za1 73 VAAGVPQK 80 (140)
T ss_dssp ECCCCCCC
T ss_pred EecccccC
Confidence 99986543
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.14 E-value=0.00064 Score=57.23 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=55.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH---HHHHHhc--CccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG---SLLMALR--DVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~---~l~~~~~--~~DvVi 113 (429)
+.+|+|+||+|.+|..+++..... |.+|++.+++.++.+.+. +++. + ..+|..+.+ .+.++.. ++|+|+
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~k~~~~~-~lGa--~-~vi~~~~~d~~~~v~~~t~g~g~d~v~ 102 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSAL-KAGA--W-QVINYREEDLVERLKEITGGKKVRVVY 102 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH-HHTC--S-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEEccccccchHHHHHHHHh--CCeEeecccchHHHHHHH-hcCC--e-EEEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 569999999999999999998876 899999999999876654 4542 2 235776654 3333333 689999
Q ss_pred ecCCC
Q 014177 114 HAAGP 118 (429)
Q Consensus 114 ~~agp 118 (429)
++++.
T Consensus 103 d~~g~ 107 (179)
T d1qora2 103 DSVGR 107 (179)
T ss_dssp ECSCG
T ss_pred eCccH
Confidence 99874
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.11 E-value=0.0014 Score=55.03 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=54.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-C-cEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-N-SEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~-v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
|+|.|+| .|.+|+.+++.|++. +++|.+.||++++.+.+.+.... . ..... ...+.+.+...+...+.++-+..
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~--G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 77 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFETMEAFAASLKKPRKALILVQ 77 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEECCC
T ss_pred CEEEEEe-ehHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcCCccccccchh-hhhhhhHHHHhcccceEEEEeec
Confidence 5799999 799999999999997 89999999999999988776431 1 11122 23344555556666666666654
Q ss_pred C
Q 014177 118 P 118 (429)
Q Consensus 118 p 118 (429)
+
T Consensus 78 ~ 78 (178)
T d1pgja2 78 A 78 (178)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.00033 Score=57.37 Aligned_cols=76 Identities=20% Similarity=0.219 Sum_probs=48.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHhC---CCcEEEEe-eCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTLG---KNSEFAEV-NIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l~---~~v~~~~~-Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|||.|+|++|.+|+.++..|..+ .-..++.+.|.++ +++..+-++. ........ +-.+ . +.++++|+||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~---~-~~~~~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA---T-PALEGADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCC---H-HHHTTCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCC---c-cccCCCCEEEE
Confidence 68999999999999999887643 2346899999864 4443333332 11222111 2222 2 35789999999
Q ss_pred cCCCCC
Q 014177 115 AAGPFQ 120 (429)
Q Consensus 115 ~agp~~ 120 (429)
++|...
T Consensus 76 taG~~~ 81 (145)
T d2cmda1 76 SAGVRR 81 (145)
T ss_dssp CCSCCC
T ss_pred CCCccC
Confidence 998543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=97.07 E-value=0.00077 Score=60.03 Aligned_cols=104 Identities=15% Similarity=0.225 Sum_probs=70.0
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCCcEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKNSEF 91 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~v~~ 91 (429)
++.++.++|+|+|+ |.+|+.++..|+..+.+ +++++|.+.- |.+.+++. +.+.++.
T Consensus 25 Q~kL~~~~VliiG~-GglGs~va~~La~~Gvg-~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i 102 (247)
T d1jw9b_ 25 QEALKDSRVLIVGL-GGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAI 102 (247)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccch
Confidence 45678899999995 66999999999998433 8888885321 33333332 2345555
Q ss_pred EEeeCC-ChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 92 AEVNIY-NEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 92 ~~~Dl~-d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
...+.. +.+.....+.+.|+||.+...+.. ..-+-+.|.+.+++++.-
T Consensus 103 ~~~~~~~~~~~~~~~~~~~divid~~d~~~~--~~~in~~~~~~~ip~i~g 151 (247)
T d1jw9b_ 103 TPVNALLDDAELAALIAEHDLVLDCTDNVAV--RNQLNAGCFAAKVPLVSG 151 (247)
T ss_dssp EEECSCCCHHHHHHHHHTSSEEEECCSSHHH--HHHHHHHHHHHTCCEEEE
T ss_pred hhhhhhhhhccccccccccceeeeccchhhh--hhhHHHHHHHhCCCcccc
Confidence 555443 334566677789999988765432 246677888888888854
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=97.07 E-value=0.00057 Score=56.68 Aligned_cols=100 Identities=16% Similarity=0.233 Sum_probs=59.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE-EecCch-hHHHHHHHhCCCcEEEEeeCCChHHHHHHh--cCccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV-GSRNRE-KGAAMVSTLGKNSEFAEVNIYNEGSLLMAL--RDVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v-~~R~~~-~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~--~~~DvVi~ 114 (429)
+.||.|+| +|.+|+.+...+++..+..+++. ++|+.+ +....++..+ +.+. ....+++.+.. .++|+||.
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~--i~~~---~~~~d~l~~~~~~~~iDiVf~ 77 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMG--VTTT---YAGVEGLIKLPEFADIDFVFD 77 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTT--CCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcC--Cccc---ccceeeeeecccccccCEEEE
Confidence 46899999 78899875444444467777765 577765 3334444443 2222 22334444432 47999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCCh
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
+...... ......-.+.++|++.||.+.+.
T Consensus 78 ATpag~h-~~~~~~~~aa~~G~~VID~s~a~ 107 (157)
T d1nvmb1 78 ATSASAH-VQNEALLRQAKPGIRLIDLTPAA 107 (157)
T ss_dssp CSCHHHH-HHHHHHHHHHCTTCEEEECSTTC
T ss_pred cCCchhH-HHhHHHHHHHHcCCEEEEccccc
Confidence 8642111 01122334468899999999753
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.06 E-value=0.00092 Score=55.74 Aligned_cols=75 Identities=19% Similarity=0.279 Sum_probs=50.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCC--ChHHHHHHh-----cCccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY--NEGSLLMAL-----RDVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~--d~~~l~~~~-----~~~Dv 111 (429)
+.+|+|+| +|.+|...++.+... |.+|+++++++++++... +++.. ..+..|-. +.+...+.+ +++|+
T Consensus 27 g~~vlV~G-~G~vG~~~~~~ak~~--Ga~vi~v~~~~~r~~~a~-~~ga~-~~~~~~~~~~~~~~~~~~~~~~~g~g~D~ 101 (170)
T d1e3ja2 27 GTTVLVIG-AGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAK-NCGAD-VTLVVDPAKEEESSIIERIRSAIGDLPNV 101 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH-HTTCS-EEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCEEEEEc-ccccchhhHhhHhhh--cccccccchHHHHHHHHH-HcCCc-EEEeccccccccchhhhhhhcccccCCce
Confidence 46899998 588999999888775 789999999999876554 34322 22223322 223333333 26899
Q ss_pred EEecCCC
Q 014177 112 VVHAAGP 118 (429)
Q Consensus 112 Vi~~agp 118 (429)
||.|+|.
T Consensus 102 vid~~g~ 108 (170)
T d1e3ja2 102 TIDCSGN 108 (170)
T ss_dssp EEECSCC
T ss_pred eeecCCC
Confidence 9999873
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.06 E-value=0.00028 Score=65.97 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=32.2
Q ss_pred CCeEEEEcC--ChHHHHHHHHHHhHcCCCceEEEEecCchhHH
Q 014177 39 NARVLVLGG--TGRVGGSTAVALSKLCPDLQIVVGSRNREKGA 79 (429)
Q Consensus 39 ~~~VlV~Ga--~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~ 79 (429)
.|.+||||+ +..||.++++.|++. |++|++.+++.....
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~~~~~ 42 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPPVYNI 42 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGGGHHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCchhhhh
Confidence 578999994 347999999999997 899999988765433
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.05 E-value=0.00017 Score=59.96 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=52.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|||+|+|+ |.+|+.++..|.+. |++|++.+|+.++.+.+...... ..........+. +...++|+||.+...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~vka 73 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVTLKA 73 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEECSCG
T ss_pred CEEEEECc-CHHHHHHHHHHHHC--CCceEEEEcCHHHhhhhccccCCccccccccccchh----hhhcccceEEEeecc
Confidence 68999996 99999999999997 89999999987654322111111 111112222233 334579999998865
Q ss_pred CCCCchHHHHHHHH
Q 014177 119 FQQAPKCTVLEAAI 132 (429)
Q Consensus 119 ~~~~~~~~v~~aa~ 132 (429)
+.. ..+++.+.
T Consensus 74 ~~~---~~~~~~l~ 84 (167)
T d1ks9a2 74 WQV---SDAVKSLA 84 (167)
T ss_dssp GGH---HHHHHHHH
T ss_pred cch---HHHHHhhc
Confidence 432 44454443
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.05 E-value=0.0012 Score=53.53 Aligned_cols=74 Identities=18% Similarity=0.201 Sum_probs=52.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
|||.|+|+ |.+|+.++..|..++...++++.|+++++++.....+. .+..+... .|. +.++++|+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence 58999996 99999999999987433599999999887665433221 22333322 333 346899999
Q ss_pred EecCCCCC
Q 014177 113 VHAAGPFQ 120 (429)
Q Consensus 113 i~~agp~~ 120 (429)
|.++|...
T Consensus 74 vitag~~~ 81 (142)
T d1guza1 74 IITAGLPR 81 (142)
T ss_dssp EECCSCCC
T ss_pred EEEEecCC
Confidence 99998543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.03 E-value=0.001 Score=54.86 Aligned_cols=76 Identities=20% Similarity=0.248 Sum_probs=52.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-----CCcE-EEEeeCCChHHHHHHhcCccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-----KNSE-FAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-----~~v~-~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
+++||.|+|+ |.+|+.++..|.... -.++++.|.++++++..+..+. .... ....+ .+ .++.++++|+
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~-~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~---~~~~~~~adi 79 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRE-LADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YS---YEAALTGADC 79 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHT-CCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CS---HHHHHTTCSE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC-CceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-Cc---hhhhhcCCCe
Confidence 4689999996 999999998888763 2489999999887766544432 0111 12111 12 2456789999
Q ss_pred EEecCCCC
Q 014177 112 VVHAAGPF 119 (429)
Q Consensus 112 Vi~~agp~ 119 (429)
|+.++|..
T Consensus 80 Vvitag~~ 87 (154)
T d1pzga1 80 VIVTAGLT 87 (154)
T ss_dssp EEECCSCS
T ss_pred EEEecccc
Confidence 99999753
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.0024 Score=52.14 Aligned_cols=99 Identities=18% Similarity=0.124 Sum_probs=61.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCCcEEEEeeC--------------------
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKNSEFAEVNI-------------------- 96 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~v~~~~~Dl-------------------- 96 (429)
||+|.|+|+||.||....+-+.+.-..++|.. +++|.+.+.+...++.++.- ...|-
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v-~i~d~~~~~~l~~~l~~~~~~~~~~ 79 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYA-VMDDEASAKLLKTMLQQQGSRTEVL 79 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEE-EESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhccc-ccccHHHHHHHHHHhhhhccccccc
Confidence 67899999999999999999887422456654 46777888777777654321 11111
Q ss_pred CChHHHHHHhc--CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 97 YNEGSLLMALR--DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 97 ~d~~~l~~~~~--~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
...+++.++.. ++|+|+++..-+. | ..-.-.+++.|.+ +-++
T Consensus 80 ~g~~~l~~~~~~~~~D~vi~AI~G~a--G-L~~t~~aik~gk~-iaLA 123 (151)
T d1q0qa2 80 SGQQAACDMAALEDVDQVMAAIVGAA--G-LLPTLAAIRAGKT-ILLA 123 (151)
T ss_dssp ESHHHHHHHHTCTTCCEEEECCSSGG--G-HHHHHHHHHTTCE-EEEC
T ss_pred cChHHHHHHhcCCCCCEEEEecCccc--H-HHHHHHHHhcCCe-EEEE
Confidence 12344444443 5788888763222 2 4455566677754 4344
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.00 E-value=0.00013 Score=60.55 Aligned_cols=79 Identities=18% Similarity=0.145 Sum_probs=49.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-C----c--eEEEEecCchhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-D----L--QIVVGSRNREKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g----~--~v~v~~R~~~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
++||.|+||+|++|+.++..|....- + . ++...+++.++++.....+. .....+...- + ..+.++
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~ 79 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD-D---PKVAFK 79 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES-C---HHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC-c---hhhhcc
Confidence 46999999999999999999987421 1 1 22333455556555544332 1233333332 2 346788
Q ss_pred CccEEEecCCCCCC
Q 014177 108 DVDLVVHAAGPFQQ 121 (429)
Q Consensus 108 ~~DvVi~~agp~~~ 121 (429)
++|+||.++|....
T Consensus 80 ~advViitaG~~~~ 93 (154)
T d1y7ta1 80 DADYALLVGAAPRK 93 (154)
T ss_dssp TCSEEEECCCCCCC
T ss_pred cccEEEeecCcCCC
Confidence 99999999986543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.99 E-value=0.0015 Score=53.11 Aligned_cols=75 Identities=28% Similarity=0.358 Sum_probs=52.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
.||.|+|+ |.+|+.++..|..++-..++++.|+++++++..+.++. ........ .+. +.++++|+||
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~----~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCH----HHhhCCcEEE
Confidence 58999996 99999999999887444489999999887665433221 22222222 232 2467899999
Q ss_pred ecCCCCCC
Q 014177 114 HAAGPFQQ 121 (429)
Q Consensus 114 ~~agp~~~ 121 (429)
.++|....
T Consensus 75 itaG~~~~ 82 (143)
T d1llda1 75 ITAGPRQK 82 (143)
T ss_dssp ECCCCCCC
T ss_pred EecccccC
Confidence 99987543
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.98 E-value=0.00065 Score=55.29 Aligned_cols=73 Identities=21% Similarity=0.292 Sum_probs=47.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC------CCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG------KNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~------~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
+||.|+|+ |.+|+.++..|..+.-..++++.|++.++++..+.++. ....... .+. +.++++|+||
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~---~~~----~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDY----SDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEee---CcH----HHhCCCceEE
Confidence 57999996 99999999999887433489999999887655554443 1121111 122 3577999999
Q ss_pred ecCCCCC
Q 014177 114 HAAGPFQ 120 (429)
Q Consensus 114 ~~agp~~ 120 (429)
.++|...
T Consensus 74 itag~~~ 80 (142)
T d1y6ja1 74 VTAGANR 80 (142)
T ss_dssp ECCCC--
T ss_pred Eeccccc
Confidence 9998543
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.97 E-value=0.00061 Score=57.74 Aligned_cols=86 Identities=15% Similarity=0.183 Sum_probs=56.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch--hHHHHHHHhC-C--CcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE--KGAAMVSTLG-K--NSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~--~~~~l~~~l~-~--~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
|+|.|+| +|..|.+++..|.+. +++|.+.+|+.+ ..+.+.+... . .......++.-.+++.++++++|+||.
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~ 77 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL 77 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhc
Confidence 6899999 599999999999997 789999998544 3444433211 0 011111122234567888999999999
Q ss_pred cCCCCCCCchHHHHHHH
Q 014177 115 AAGPFQQAPKCTVLEAA 131 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa 131 (429)
+...... ..+++..
T Consensus 78 avps~~~---~~~~~~l 91 (180)
T d1txga2 78 GVSTDGV---LPVMSRI 91 (180)
T ss_dssp CSCGGGH---HHHHHHH
T ss_pred ccchhhh---HHHHHhh
Confidence 8764332 4455444
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.96 E-value=0.0011 Score=53.76 Aligned_cols=74 Identities=18% Similarity=0.193 Sum_probs=49.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC--chhHHHHHHHh------CCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN--REKGAAMVSTL------GKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~--~~~~~~l~~~l------~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
.||.|+|++|.+|+.++..|..++-.-++++.|.+ .++++..+.++ ..+...... +.+ .++++|+
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~---~~~----~~~~aDi 73 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---GYE----DTAGSDV 73 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---CGG----GGTTCSE
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeC---CHH----HhhhcCE
Confidence 37999999999999999999987434489999854 33333222222 223333333 333 3579999
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
||.+||...
T Consensus 74 VvitaG~~~ 82 (142)
T d1o6za1 74 VVITAGIPR 82 (142)
T ss_dssp EEECCCCCC
T ss_pred EEEeccccc
Confidence 999998543
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.94 E-value=0.0034 Score=51.22 Aligned_cols=51 Identities=25% Similarity=0.317 Sum_probs=38.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEE--EecCchhHHHHHHHhCCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVV--GSRNREKGAAMVSTLGKN 88 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v--~~R~~~~~~~l~~~l~~~ 88 (429)
++|+|.|+|+||.||....+-+.+....++|+. +.+|.+++.+...++.++
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk 53 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAK 53 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccc
Confidence 468999999999999999999877322466655 457777887777776543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.92 E-value=0.0013 Score=53.94 Aligned_cols=67 Identities=27% Similarity=0.368 Sum_probs=51.6
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|+|.++| +|.+|+++++.|++.+ .++|.+.+|++++++.+.++++ +... + +.+ .++++|+||-|.-|
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~-~~~i~v~~r~~~~~~~l~~~~~--~~~~--~--~~~----~v~~~Div~lavkP 67 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQG-GYRIYIANRGAEKRERLEKELG--VETS--A--TLP----ELHSDDVLILAVKP 67 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHC-SCEEEEECSSHHHHHHHHHHTC--CEEE--S--SCC----CCCTTSEEEECSCH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCC-CCcEEEEeCChhHHHHhhhhcc--cccc--c--ccc----cccccceEEEecCH
Confidence 6899999 5999999999998873 4899999999999998887653 3222 1 212 24679999988765
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.90 E-value=0.0027 Score=52.74 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=57.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
.+.+|+|+|+ |.+|...++.+... |.++++.+++.++.+ +.++++.. ...|..+.+......+++|++|.++|
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~--Ga~~i~~~~~~~~~~-~a~~lGad---~~i~~~~~~~~~~~~~~~D~vid~~g 102 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSEAKRE-AAKALGAD---EVVNSRNADEMAAHLKSFDFILNTVA 102 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSGGGHH-HHHHHTCS---EEEETTCHHHHHTTTTCEEEEEECCS
T ss_pred CCCEEEEecc-chHHHHHHHHhhcc--cccchhhccchhHHH-HHhccCCc---EEEECchhhHHHHhcCCCceeeeeee
Confidence 3578999996 77999999888776 888999999888765 44556522 23577787766666778999999997
Q ss_pred C
Q 014177 118 P 118 (429)
Q Consensus 118 p 118 (429)
.
T Consensus 103 ~ 103 (168)
T d1uufa2 103 A 103 (168)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.87 E-value=0.0012 Score=55.79 Aligned_cols=74 Identities=16% Similarity=0.276 Sum_probs=51.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH--H----HHHHhc--C
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG--S----LLMALR--D 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~--~----l~~~~~--~ 108 (429)
.+.+|+|+|+ |.+|..+++.+... |. +|++.++++++++.. ++++.. ..+|..+.+ + +.+... +
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~--Ga~~Vi~~~~~~~~~~~a-~~lGa~---~vi~~~~~~~~~~~~~i~~~~~~~g 100 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSL--GAENVIVIAGSPNRLKLA-EEIGAD---LTLNRRETSVEERRKAIMDITHGRG 100 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHH-HHTTCS---EEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCCEEEEECC-Cccchhheeccccc--cccccccccccccccccc-ccccce---EEEeccccchHHHHHHHHHhhCCCC
Confidence 3579999996 78999999988876 66 799999999987654 455421 234554422 2 222222 6
Q ss_pred ccEEEecCCC
Q 014177 109 VDLVVHAAGP 118 (429)
Q Consensus 109 ~DvVi~~agp 118 (429)
+|+||.|+|.
T Consensus 101 ~Dvvid~vG~ 110 (182)
T d1vj0a2 101 ADFILEATGD 110 (182)
T ss_dssp EEEEEECSSC
T ss_pred ceEEeecCCc
Confidence 8999999874
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.86 E-value=0.0012 Score=55.02 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=53.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCC-ChHHHHHHhcCccEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIY-NEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~-d~~~l~~~~~~~DvVi~~a 116 (429)
.+.+|+|+|+ |.+|...++.+... |.+|++.++++++++.. ++++. +.+ .|.. +.+..++..++.|+++.|.
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~--G~~vi~~~~~~~k~~~a-~~lGa--~~~-i~~~~~~~~~~~~~~~~d~vi~~~ 99 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSRKREDA-MKMGA--DHY-IATLEEGDWGEKYFDTFDLIVVCA 99 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSSTTHHHH-HHHTC--SEE-EEGGGTSCHHHHSCSCEEEEEECC
T ss_pred CCCEEEEECC-CCcchhHHHHhhhc--cccccccccchhHHHHh-hccCC--cEE-eeccchHHHHHhhhcccceEEEEe
Confidence 4579999996 88999999887776 88999999999987754 44542 222 2332 3344555566899999997
Q ss_pred CCC
Q 014177 117 GPF 119 (429)
Q Consensus 117 gp~ 119 (429)
+..
T Consensus 100 ~~~ 102 (168)
T d1piwa2 100 SSL 102 (168)
T ss_dssp SCS
T ss_pred cCC
Confidence 643
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.86 E-value=0.0026 Score=54.70 Aligned_cols=114 Identities=21% Similarity=0.151 Sum_probs=73.7
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLV 112 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvV 112 (429)
..++++++|+|-| .|.+|+++++.|.+. |.+|++.|.+.+++..... + ..+.+ +.+ +++. +||++
T Consensus 22 ~~~L~gk~v~IqG-~G~VG~~~A~~L~~~--Gakvvv~d~d~~~~~~~~~-~--g~~~~-----~~~---~~~~~~~DI~ 87 (201)
T d1c1da1 22 LGSLDGLTVLVQG-LGAVGGSLASLAAEA--GAQLLVADTDTERVAHAVA-L--GHTAV-----ALE---DVLSTPCDVF 87 (201)
T ss_dssp CCCSTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH-T--TCEEC-----CGG---GGGGCCCSEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEecchHHHHHHHHh-h--ccccc-----Ccc---ccccccceee
Confidence 3468999999999 799999999999997 8999999999887766543 2 22222 222 2344 89999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
+-||...... . +.+.+.++++|-=..+...... ..++..+++|+.++|+
T Consensus 88 iPcA~~~~I~--~---~~a~~i~ak~i~e~AN~p~~~~--~~~~~L~~rgI~~iPD 136 (201)
T d1c1da1 88 APCAMGGVIT--T---EVARTLDCSVVAGAANNVIADE--AASDILHARGILYAPD 136 (201)
T ss_dssp EECSCSCCBC--H---HHHHHCCCSEECCSCTTCBCSH--HHHHHHHHTTCEECCH
T ss_pred eccccccccc--H---HHHhhhhhheeeccCCCCcchh--hHHHHhcccceEEEeh
Confidence 9998644321 2 2334567777733322222111 1234456778877665
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=96.84 E-value=0.002 Score=53.99 Aligned_cols=99 Identities=19% Similarity=0.154 Sum_probs=61.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEee-----------CCChHHHHHHh
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVN-----------IYNEGSLLMAL 106 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~D-----------l~d~~~l~~~~ 106 (429)
|++|.|-| .|.||+.+++.|.++ ++.+++.. ++++.......-... ......+ +.-......++
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~-~di~vvaInd~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~v~g~~~~~~ 76 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKG--YDLYVAIPERVKLFEKAGIEVAGTVDDML 76 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTT--CCEEESSGGGHHHHHHTTCCCCEEHHHHH
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhC-CCceEEEEecCCcHHHHHHHHhcC--CceEecccccceeecccCcccCCChhHhh
Confidence 57899998 899999999999885 57777655 444432222222221 1111110 11011234455
Q ss_pred cCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 107 RDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 107 ~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+++|+||-|.|.|.. ..-++.-+++|++.|..++.
T Consensus 77 ~~vDvViEcTG~f~~---~~~~~~hl~~G~K~vi~~~~ 111 (171)
T d1cf2o1 77 DEADIVIDCTPEGIG---AKNLKMYKEKGIKAIFQGGE 111 (171)
T ss_dssp HTCSEEEECCSTTHH---HHHHHHHHHTTCEEEECTTS
T ss_pred cCCCEEEEccCCCCC---HHHHHHHHHcCCCEEEECCC
Confidence 689999999998753 45567778899988866544
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.80 E-value=0.0016 Score=51.69 Aligned_cols=97 Identities=10% Similarity=0.056 Sum_probs=67.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHH-hcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMA-LRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~-~~~~DvVi~~agp 118 (429)
|.++|+| +|.+|+.+++.|.. .++++.+.++++.+.+.. ..+.++.+|.+|++.++++ +++++.+|-+..-
T Consensus 1 kHivI~G-~g~~g~~l~~~L~~----~~i~vi~~d~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~ 72 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELRG----SEVFVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKANVRGARAVIVNLES 72 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSCG----GGEEEEESCTTHHHHHHH---TTCEEEESCTTSHHHHHHTTCTTCSEEEECCSS
T ss_pred CEEEEEC-CCHHHHHHHHHHcC----CCCEEEEcchHHHHHHHh---cCccccccccCCHHHHHHhhhhcCcEEEEeccc
Confidence 4688998 68899999999854 457788899888776654 3588999999999988775 4589999977542
Q ss_pred CCCCchHHHHHHHHHcC--CcEEEeCCChh
Q 014177 119 FQQAPKCTVLEAAIETK--TAYIDVCDDTI 146 (429)
Q Consensus 119 ~~~~~~~~v~~aa~~~g--v~~vdis~~~~ 146 (429)
- ..+..++..+.+.. ++.+-...+..
T Consensus 73 d--~~n~~~~~~~r~~~~~~~iia~~~~~~ 100 (129)
T d2fy8a1 73 D--SETIHCILGIRKIDESVRIIAEAERYE 100 (129)
T ss_dssp H--HHHHHHHHHHHHHCSSSCEEEECSSGG
T ss_pred h--hhhHHHHHHHHHHCCCceEEEEEcCHH
Confidence 1 11234444555543 34454444443
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.78 E-value=0.0016 Score=54.81 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=69.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEE-------------------eeCCC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAE-------------------VNIYN 98 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~-------------------~Dl~d 98 (429)
.+-+|+|+|| |.+|.+.++-.... |.+|.+.|.++++++++.+..+..++... .-..+
T Consensus 28 ~pa~VvViGa-GvaG~~Aa~~A~~l--GA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~ 104 (183)
T d1l7da1 28 PPARVLVFGV-GVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 104 (183)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCcEEEEEcC-cHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHH
Confidence 4578999995 99999999998887 89999999999999988765431111100 00112
Q ss_pred hHHHHHHhcCccEEEecCCCCCCC----chHHHHHHHHHcCCcEEEeCCCh
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQA----PKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~~----~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.+.+.+.++++|+||.++-..... -+..+++ ..+.|.-.||++.+.
T Consensus 105 ~~~l~~~l~~aDlVI~talipG~~aP~lit~~mv~-~Mk~GSVIVDvaidq 154 (183)
T d1l7da1 105 AEAVLKELVKTDIAITTALIPGKPAPVLITEEMVT-KMKPGSVIIDLAVEA 154 (183)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHT-TSCTTCEEEETTGGG
T ss_pred HHHHHHHHHhhhhheeeeecCCcccceeehHHHHH-hcCCCcEEEEEeecC
Confidence 455777788999999998432221 1123332 345677788887543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0046 Score=51.40 Aligned_cols=75 Identities=16% Similarity=0.293 Sum_probs=52.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-----CccEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-----DVDLV 112 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-----~~DvV 112 (429)
+.+|+|+|+ |.+|...+..+... |. +|++.++++++++.. ++++.. ..+..+-.+.....+.+. ++|+|
T Consensus 27 gd~VlI~G~-G~iG~~~~~~a~~~--G~~~Vi~~d~~~~rl~~a-~~~Ga~-~~~~~~~~~~~~~~~~~~~~~g~g~Dvv 101 (171)
T d1pl8a2 27 GHKVLVCGA-GPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKA-KEIGAD-LVLQISKESPQEIARKVEGQLGCKPEVT 101 (171)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHH-HHTTCS-EEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred CCEEEEECC-CccHHHHHHHHHHc--CCceEEeccCCHHHHHHH-HHhCCc-ccccccccccccccccccccCCCCceEE
Confidence 468999986 88999999988876 66 799999999987754 455422 233333344444444332 68999
Q ss_pred EecCCC
Q 014177 113 VHAAGP 118 (429)
Q Consensus 113 i~~agp 118 (429)
|.|+|.
T Consensus 102 id~~G~ 107 (171)
T d1pl8a2 102 IECTGA 107 (171)
T ss_dssp EECSCC
T ss_pred EeccCC
Confidence 999873
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.74 E-value=0.0013 Score=55.44 Aligned_cols=95 Identities=17% Similarity=0.107 Sum_probs=61.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChH-HHHHHhc--CccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG-SLLMALR--DVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~-~l~~~~~--~~DvVi~~ 115 (429)
+.+|||.||+|.+|+.+++..... |.+|+...++.++.+... .++.. . ..|..+.. +..+... ++|+||++
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k~~~~~-~lGa~--~-vi~~~~~~~~~~~~~~~~gvD~vid~ 105 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLR-VLGAK--E-VLAREDVMAERIRPLDKQRWAAAVDP 105 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHH-HTTCS--E-EEECC---------CCSCCEEEEEEC
T ss_pred CCEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHHHHHHH-hcccc--e-eeecchhHHHHHHHhhccCcCEEEEc
Confidence 468999999999999999998876 899999999988876654 44422 1 22433321 1112222 79999999
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.|... ..-.-.|++.+-+++.+..
T Consensus 106 vgg~~----~~~~l~~l~~~Griv~~G~ 129 (176)
T d1xa0a2 106 VGGRT----LATVLSRMRYGGAVAVSGL 129 (176)
T ss_dssp STTTT----HHHHHHTEEEEEEEEECSC
T ss_pred CCchh----HHHHHHHhCCCceEEEeec
Confidence 87432 3334445556667776654
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.65 E-value=0.0023 Score=52.91 Aligned_cols=71 Identities=18% Similarity=0.265 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+.+|+++|+| +|.||+.+++.|... +.+|++.+.++.+ .+..... .++.. .+++++...|+||-+
T Consensus 21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~--G~~V~v~e~dp~~--al~A~~d-G~~v~--------~~~~a~~~adivvta 86 (163)
T d1li4a1 21 MIAGKVAVVAG-YGDVGKGCAQALRGF--GARVIITEIDPIN--ALQAAME-GYEVT--------TMDEACQEGNIFVTT 86 (163)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHH--HHHHHHT-TCEEC--------CHHHHTTTCSEEEEC
T ss_pred eecCCEEEEec-cccccHHHHHHHHhC--CCeeEeeecccch--hHHhhcC-ceEee--------ehhhhhhhccEEEec
Confidence 36789999999 999999999999987 8999999998754 3333332 22222 356778899999998
Q ss_pred CCCCC
Q 014177 116 AGPFQ 120 (429)
Q Consensus 116 agp~~ 120 (429)
.|-.+
T Consensus 87 TGn~~ 91 (163)
T d1li4a1 87 TGCID 91 (163)
T ss_dssp SSCSC
T ss_pred CCCcc
Confidence 87543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.63 E-value=0.003 Score=51.21 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=50.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh-------CCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL-------GKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l-------~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
|||.|+|+ |.+|+.++..|+.++--.++++.|+++++++..+.++ +........ .|. +.++++|+|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~----~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCH----HHhccccEE
Confidence 68999995 9999999999987743348999999988765533222 112222221 232 357799999
Q ss_pred EecCCCCC
Q 014177 113 VHAAGPFQ 120 (429)
Q Consensus 113 i~~agp~~ 120 (429)
|-++|...
T Consensus 74 vitag~~~ 81 (142)
T d1ojua1 74 VVTAGLAR 81 (142)
T ss_dssp EECCCCCC
T ss_pred EEeccccC
Confidence 99998443
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.60 E-value=0.00091 Score=56.55 Aligned_cols=100 Identities=21% Similarity=0.182 Sum_probs=61.1
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-cCchhHHHHHHHhCCCcE--------EEEeeCCChHHHHHHhcCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-RNREKGAAMVSTLGKNSE--------FAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R~~~~~~~l~~~l~~~v~--------~~~~Dl~d~~~l~~~~~~~ 109 (429)
|-||.|.| .|.||+.+++.|.++ ++.+|+.+. +++............... +..-.+.....+.....++
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~-~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~v 78 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQ-PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTS 78 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTC-TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHC
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhC-CCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcC
Confidence 45899999 899999999999985 688887764 444332222211111000 0000011111234445579
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
|+||-|.|.|.. ..-++..++.|++.|..++
T Consensus 79 DiViecTG~f~~---~e~a~~hl~~G~KvIi~~~ 109 (178)
T d1b7go1 79 DIVVDTTPNGVG---AQYKPIYLQLQRNAIFQGG 109 (178)
T ss_dssp SEEEECCSTTHH---HHHHHHHHHTTCEEEECTT
T ss_pred CEEEECCCCcCC---HHHHHHHHHcCCEEEEECC
Confidence 999999997653 4667888899987775543
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.59 E-value=0.0045 Score=51.34 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=52.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh-----cCccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL-----RDVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~-----~~~DvV 112 (429)
.+.+|+|+|++|.+|..++..+...+ ..+|++.++++++.+.+. +++.. ...|..+.+..++.. +++|+|
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g-~~~V~~~~~~~~~~~~~~-~~Ga~---~~i~~~~~~~~~~~~~~~~~~~~d~v 101 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAK-RAGAD---YVINASMQDPLAEIRRITESKGVDAV 101 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHH-HHTCS---EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEEeccccceeeeeecccccc-cccccccccchhhHHHHH-HcCCc---eeeccCCcCHHHHHHHHhhcccchhh
Confidence 34689999998999999999988862 358999999988866554 45422 234555544333333 259999
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
|.|+|
T Consensus 102 id~~g 106 (170)
T d1jvba2 102 IDLNN 106 (170)
T ss_dssp EESCC
T ss_pred hcccc
Confidence 99987
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.55 E-value=0.0032 Score=51.80 Aligned_cols=69 Identities=16% Similarity=0.227 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+|+++|+| ||.+|+-+++.|... |.+|++...+|-+ ++....+ .++.. .++++++..|++|.+.
T Consensus 21 laGk~vvV~G-YG~vGrG~A~~~rg~--Ga~V~V~E~DPi~--alqA~md-Gf~v~--------~~~~a~~~aDi~vTaT 86 (163)
T d1v8ba1 21 ISGKIVVICG-YGDVGKGCASSMKGL--GARVYITEIDPIC--AIQAVME-GFNVV--------TLDEIVDKGDFFITCT 86 (163)
T ss_dssp CTTSEEEEEC-CSHHHHHHHHHHHHH--TCEEEEECSCHHH--HHHHHTT-TCEEC--------CHHHHTTTCSEEEECC
T ss_pred ecCCEEEEec-ccccchhHHHHHHhC--CCEEEEEecCchh--hHHHHhc-CCccC--------chhHccccCcEEEEcC
Confidence 6789999999 999999999999998 8999999998854 4444332 33322 3567889999999988
Q ss_pred CCC
Q 014177 117 GPF 119 (429)
Q Consensus 117 gp~ 119 (429)
|-.
T Consensus 87 Gn~ 89 (163)
T d1v8ba1 87 GNV 89 (163)
T ss_dssp SSS
T ss_pred CCC
Confidence 753
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.0036 Score=48.38 Aligned_cols=87 Identities=17% Similarity=0.301 Sum_probs=62.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEecC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHAA 116 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~a 116 (429)
..||.|+| +|..|+-++....+. |+++++.|.+++.-.. .+ --.++..|..|.+.+.++.. ++|+|.-
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~l--G~~v~v~d~~~~~PA~---~v--a~~~i~~~~~d~~~l~~~~~~~~~DviT~-- 80 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRL--GVEVIAVDRYADAPAM---HV--AHRSHVINMLDGDALRRVVELEKPHYIVP-- 80 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTT--TCEEEEEESSTTCGGG---GG--SSEEEECCTTCHHHHHHHHHHHCCSEEEE--
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHC--CCEEEEEcCCCCCchh---hc--CCeEEECCCCCHHHHHHHHHhhCCceEEE--
Confidence 36899999 599999999998887 8999999987664221 11 12678899999999988875 6798853
Q ss_pred CCCCCCchHHHHHHHHHcCCc
Q 014177 117 GPFQQAPKCTVLEAAIETKTA 137 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~ 137 (429)
-+.+.. ...++.+.+.|++
T Consensus 81 -E~EnI~-~~~L~~le~~g~~ 99 (111)
T d1kjqa2 81 -EIEAIA-TDMLIQLEEEGLN 99 (111)
T ss_dssp -CSSCSC-HHHHHHHHHTTCE
T ss_pred -EecCcC-HHHHHHHHHCCCe
Confidence 222222 5667776666644
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.40 E-value=0.002 Score=54.76 Aligned_cols=73 Identities=26% Similarity=0.257 Sum_probs=51.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCce-EEEEecCchhHHHHHHHhCCCcEEEEeeCCChH---HHHHHhc-CccEEEe
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQ-IVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEG---SLLMALR-DVDLVVH 114 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~-v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~---~l~~~~~-~~DvVi~ 114 (429)
..|||.||+|.||+.+++..... |.+ |+.++++.++...+...++.. ...|..+.+ .+++... ++|+|++
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~--Ga~~vi~~~~~~e~~~~l~~~~gad---~vi~~~~~~~~~~~~~~~~~GvDvv~D 106 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLL--GCSRVVGICGTQEKCLFLTSELGFD---AAVNYKTGNVAEQLREACPGGVDVYFD 106 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHT--TCSEEEEEESSHHHHHHHHHHSCCS---EEEETTSSCHHHHHHHHCTTCEEEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHc--CCcceecccchHHHHhhhhhcccce---EEeeccchhHHHHHHHHhccCceEEEe
Confidence 67999999999999999988765 665 455567777777777766532 345666533 2333332 6999999
Q ss_pred cCC
Q 014177 115 AAG 117 (429)
Q Consensus 115 ~ag 117 (429)
+.|
T Consensus 107 ~vG 109 (187)
T d1vj1a2 107 NVG 109 (187)
T ss_dssp SSC
T ss_pred cCC
Confidence 987
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0026 Score=54.36 Aligned_cols=43 Identities=21% Similarity=0.216 Sum_probs=37.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV 82 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~ 82 (429)
|+-++|.|+|+ |.+|+.++..++.. |++|++.|++++.+++..
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~~~l~~a~ 44 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSK 44 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhC--CCcEEEEECChHHHHHHH
Confidence 66789999995 99999999999987 899999999998666543
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.36 E-value=0.0023 Score=45.99 Aligned_cols=43 Identities=26% Similarity=0.421 Sum_probs=36.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV 82 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~ 82 (429)
++.+|+|.||+|.+|...++.+... +++|+...+++++.+.+.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCHHHHHHHH
Confidence 4578999999999999999987776 889999999998876554
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.33 E-value=0.0023 Score=54.86 Aligned_cols=67 Identities=18% Similarity=0.165 Sum_probs=49.3
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
..+.+++|.|+| +|.||+.+++.|... |.+|++.++........ ... ..++++++++.+|+|+.
T Consensus 39 ~el~gk~vgIiG-~G~IG~~va~~l~~f--g~~V~~~d~~~~~~~~~-----~~~--------~~~~l~~~l~~sDii~~ 102 (197)
T d1j4aa1 39 REVRDQVVGVVG-TGHIGQVFMQIMEGF--GAKVITYDIFRNPELEK-----KGY--------YVDSLDDLYKQADVISL 102 (197)
T ss_dssp CCGGGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHH-----TTC--------BCSCHHHHHHHCSEEEE
T ss_pred ccccCCeEEEec-ccccchhHHHhHhhh--cccccccCccccccccc-----cee--------eeccccccccccccccc
Confidence 457889999999 899999999999875 89999998765432211 111 12347778888998888
Q ss_pred cCC
Q 014177 115 AAG 117 (429)
Q Consensus 115 ~ag 117 (429)
++.
T Consensus 103 ~~p 105 (197)
T d1j4aa1 103 HVP 105 (197)
T ss_dssp CSC
T ss_pred cCC
Confidence 764
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.32 E-value=0.0036 Score=52.41 Aligned_cols=74 Identities=22% Similarity=0.186 Sum_probs=51.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh---HHHHHHhc--CccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE---GSLLMALR--DVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~---~~l~~~~~--~~Dv 111 (429)
.+.+|+|+|+ |.+|...++.+... |. +|++.++++++++.. ++++.. . .+|..+. +.+.+... ++|+
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~--Ga~~Vi~~d~~~~r~~~a-~~lGa~-~--~i~~~~~~~~~~v~~~t~g~G~D~ 99 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLR--GAGRIIGVGSRPICVEAA-KFYGAT-D--ILNYKNGHIEDQVMKLTNGKGVDR 99 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTT--TCSCEEEECCCHHHHHHH-HHHTCS-E--EECGGGSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEEcC-Ccchhhhhhhhhcc--cccccccccchhhhHHHH-HhhCcc-c--cccccchhHHHHHHHHhhccCcce
Confidence 3568999985 88999999888775 65 799999998886544 445421 2 2344442 33444443 5999
Q ss_pred EEecCCC
Q 014177 112 VVHAAGP 118 (429)
Q Consensus 112 Vi~~agp 118 (429)
||.|+|.
T Consensus 100 vid~~g~ 106 (174)
T d1jqba2 100 VIMAGGG 106 (174)
T ss_dssp EEECSSC
T ss_pred EEEccCC
Confidence 9999974
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.29 E-value=0.0062 Score=48.35 Aligned_cols=111 Identities=12% Similarity=0.004 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCC---hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGT---GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~---G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
++.++|.|+|++ +..|..+.+.|.+.+ ..+|+.+..+.+.. . .. ...-+ +.++-..+|+++
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~i-------~-G~-~~y~s------l~dlp~~vDlvv 69 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEEV-------Q-GV-KAYKS------VKDIPDEIDLAI 69 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSEE-------T-TE-ECBSS------TTSCSSCCSEEE
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCcccc-------C-Ce-Eeecc------hhhcCCCCceEE
Confidence 677999999998 889999999998743 46888876543321 0 11 11223 333445799999
Q ss_pred ecCCCCCCCchHHHHHHHHHcCCcEEEeCCC--hh----HHHHHHhhHHHHHHcCCcEE
Q 014177 114 HAAGPFQQAPKCTVLEAAIETKTAYIDVCDD--TI----YSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 114 ~~agp~~~~~~~~v~~aa~~~gv~~vdis~~--~~----~~~~~~~~~~~a~~~g~~~i 166 (429)
-+..+... ..+++.|.+.|++.+-+-+. .+ -......+.+.+++.|+.++
T Consensus 70 i~vp~~~~---~~~~~~~~~~g~~~~vi~s~Gf~e~~~~~~~~~~~l~~~a~~~girv~ 125 (129)
T d2csua1 70 IVVPKRFV---KDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRII 125 (129)
T ss_dssp ECSCHHHH---HHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EecChHHh---HHHHHHHHHcCCCEEEEecccccccchhhHHHHHHHHHHHHHcCCEEe
Confidence 88865433 68999999999997544321 11 11122356667778887653
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.29 E-value=0.0081 Score=48.95 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=50.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
.||.|+|+ |.+|+.++..|..+. =.++++.|+++++++..+..+. .+......+ +. +.++++|+|
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~-l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv 75 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKN-LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV 75 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence 68999995 999999998887753 3589999999887665544332 122233222 22 346799999
Q ss_pred EecCCCC
Q 014177 113 VHAAGPF 119 (429)
Q Consensus 113 i~~agp~ 119 (429)
|.++|..
T Consensus 76 vitag~~ 82 (150)
T d1t2da1 76 IVTAGFT 82 (150)
T ss_dssp EECCSCS
T ss_pred EEecccc
Confidence 9999843
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=96.27 E-value=0.0037 Score=52.09 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=58.5
Q ss_pred CCeEEEEcCChHHHHH-HHHHHhHcCCC---ceEEEEecCchhHHHHHHHh-------CCCcEEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGS-TAVALSKLCPD---LQIVVGSRNREKGAAMVSTL-------GKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~-l~~~L~~~~~g---~~v~v~~R~~~~~~~l~~~l-------~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
..||.|+|| |.+|.. ++..|+.+.+. .++++.|.++++++.....+ ......... +| ..+.++
T Consensus 3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~eal~ 76 (167)
T d1u8xx1 3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEAFT 76 (167)
T ss_dssp CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHHHS
T ss_pred CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhccC
Confidence 358999997 545554 44445443333 38999999999877443322 222333322 23 456789
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcE
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
++|+||+++|+....+..+.-+...++|+..
T Consensus 77 ~AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~ 107 (167)
T d1u8xx1 77 DVDFVMAHIRVGKYAMRALDEQIPLKYGVVG 107 (167)
T ss_dssp SCSEEEECCCTTHHHHHHHHHHHHHTTTCCC
T ss_pred CCCEEEECCCcCCCCceeHHHhhchhcCcee
Confidence 9999999998755444445555667777644
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.24 E-value=0.0043 Score=52.83 Aligned_cols=81 Identities=17% Similarity=0.037 Sum_probs=53.7
Q ss_pred ccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 24 KETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
|....|.......+.++++.|+| .|.||+.+++.|... +.++...++............ . .. .++++
T Consensus 32 w~~~~~~~~~~~~l~g~tvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~~~---~--~~-----~~~l~ 98 (191)
T d1gdha1 32 WPGWEPLELVGEKLDNKTLGIYG-FGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASYQ---A--TF-----HDSLD 98 (191)
T ss_dssp CCCCCTTTTCBCCCTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHHT---C--EE-----CSSHH
T ss_pred CCcCCccccccceecccceEEee-cccchHHHHHHHHhh--ccccccccccccccchhhccc---c--cc-----cCCHH
Confidence 33333444444567889999999 799999999998875 889999987655333222110 0 11 13467
Q ss_pred HHhcCccEEEecCC
Q 014177 104 MALRDVDLVVHAAG 117 (429)
Q Consensus 104 ~~~~~~DvVi~~ag 117 (429)
++++.+|+|+.++.
T Consensus 99 ~ll~~sD~v~l~~p 112 (191)
T d1gdha1 99 SLLSVSQFFSLNAP 112 (191)
T ss_dssp HHHHHCSEEEECCC
T ss_pred HHHhhCCeEEecCC
Confidence 77888898877664
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.24 E-value=0.0012 Score=55.13 Aligned_cols=74 Identities=28% Similarity=0.373 Sum_probs=50.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh--HHHHHHh-cCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE--GSLLMAL-RDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~--~~l~~~~-~~~DvVi~~ 115 (429)
+.+|||.||+|.+|..+++..... |++|+...++.+|.+.+.+ ++. +.+ .|..+. +.+...- +++|+||++
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~~~~-lGa--d~v-i~~~~~~~~~~~~~~~~gvd~vid~ 97 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ-LGA--SEV-ISREDVYDGTLKALSKQQWQGAVDP 97 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH-HTC--SEE-EEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred CCEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCHHHHHHHHh-hcc--cce-EeccchhchhhhcccCCCceEEEec
Confidence 357999999999999999888776 8999999999998776654 442 222 232211 1111111 269999999
Q ss_pred CCC
Q 014177 116 AGP 118 (429)
Q Consensus 116 agp 118 (429)
.|.
T Consensus 98 vgg 100 (167)
T d1tt7a2 98 VGG 100 (167)
T ss_dssp CCT
T ss_pred CcH
Confidence 873
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.19 E-value=0.0022 Score=53.94 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=49.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC-----CCceEEEEecCc--hhHHHHHHHhC----CCcEEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC-----PDLQIVVGSRNR--EKGAAMVSTLG----KNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~-----~g~~v~v~~R~~--~~~~~l~~~l~----~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
..+|.|+||+|.||+.++..|++.. ....+.+.|.+. ++++.+.-++. .....+..- ++ ..+.++
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~---~~~~~~ 99 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-ID---PYEVFE 99 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SC---HHHHTT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-cc---chhhcc
Confidence 4589999999999999999998631 123566666544 34444443332 122222221 22 356789
Q ss_pred CccEEEecCCCCC
Q 014177 108 DVDLVVHAAGPFQ 120 (429)
Q Consensus 108 ~~DvVi~~agp~~ 120 (429)
++|+||-++|...
T Consensus 100 ~aDvVvi~ag~~r 112 (175)
T d7mdha1 100 DVDWALLIGAKPR 112 (175)
T ss_dssp TCSEEEECCCCCC
T ss_pred CCceEEEeeccCC
Confidence 9999999997644
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.17 E-value=0.0034 Score=52.86 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=51.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~~ag 117 (429)
.+|||+||+|.+|...++..... |++|+...+++++.+.+. .++ .+.+ .|..+.+..+.+.+ ..|.+|++++
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~~k~~~~~-~lG--ad~v-i~~~~~~~~~~l~~~~~~~vvD~Vg 105 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLK-SLG--ASRV-LPRDEFAESRPLEKQVWAGAIDTVG 105 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHH-HHT--EEEE-EEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred CcEEEEEccccchHHHHHHHHHc--CCCeEEEecchhHHHHHH-hhc--cccc-cccccHHHHHHHHhhcCCeeEEEcc
Confidence 58999999999999999998876 899999999999876554 443 2222 34433322222222 4699999986
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.15 E-value=0.0031 Score=53.34 Aligned_cols=62 Identities=31% Similarity=0.299 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+.+++|.|+| +|.||+.+++.|... |.+|++.+|++... .. .-.++++++++.+|+|+.++
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~--g~~v~~~d~~~~~~---------~~-------~~~~~l~ell~~sDiv~~~~ 100 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAAL--GAQVRGFSRTPKEG---------PW-------RFTNSLEEALREARAAVCAL 100 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHT--TCEEEEECSSCCCS---------SS-------CCBSCSHHHHTTCSEEEECC
T ss_pred ccCceEEEec-cccccccceeeeecc--cccccccccccccc---------ce-------eeeechhhhhhccchhhccc
Confidence 7889999999 799999999999986 89999999875421 11 11234778899999999876
Q ss_pred C
Q 014177 117 G 117 (429)
Q Consensus 117 g 117 (429)
.
T Consensus 101 p 101 (181)
T d1qp8a1 101 P 101 (181)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=96.12 E-value=0.042 Score=47.92 Aligned_cols=89 Identities=19% Similarity=0.222 Sum_probs=60.1
Q ss_pred CCCeEEEEcCC---hHHHHHHHHHHhHcCCCceEE-EEecCchhHHHHHHHhCC-CcEEEEeeCCChHHHHHHhc--Ccc
Q 014177 38 RNARVLVLGGT---GRVGGSTAVALSKLCPDLQIV-VGSRNREKGAAMVSTLGK-NSEFAEVNIYNEGSLLMALR--DVD 110 (429)
Q Consensus 38 ~~~~VlV~Ga~---G~iG~~l~~~L~~~~~g~~v~-v~~R~~~~~~~l~~~l~~-~v~~~~~Dl~d~~~l~~~~~--~~D 110 (429)
++.||.|+|.+ |+++..-...+.+..++++|+ +++++.++++++.+.++. .... ..|.+ ++++ ++|
T Consensus 15 k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~----~~~~~---~l~~~~~iD 87 (237)
T d2nvwa1 15 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATG----FDSLE---SFAQYKDID 87 (237)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEE----ESCHH---HHHHCTTCS
T ss_pred CCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhccccccee----ecchh---hcccccccc
Confidence 44799999963 346665555666544578877 678999998888877642 2221 23444 4443 789
Q ss_pred EEEecCCCCCCCchHHHHHHHHHcCC
Q 014177 111 LVVHAAGPFQQAPKCTVLEAAIETKT 136 (429)
Q Consensus 111 vVi~~agp~~~~~~~~v~~aa~~~gv 136 (429)
+|+-|..+... ...+..|+++|.
T Consensus 88 ~V~i~tp~~~h---~~~~~~al~aG~ 110 (237)
T d2nvwa1 88 MIVVSVKVPEH---YEVVKNILEHSS 110 (237)
T ss_dssp EEEECSCHHHH---HHHHHHHHHHSS
T ss_pred eeeccCCCcch---hhHHHHHHHhcc
Confidence 99988765433 678889999885
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=96.11 E-value=0.0016 Score=57.21 Aligned_cols=114 Identities=17% Similarity=0.074 Sum_probs=74.7
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLV 112 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvV 112 (429)
+.++++++|+|-| .|.+|+++++.|.+. |.++++.|.+..+++.+....+. +. .+.++ ++. +||++
T Consensus 34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~--Gakvv~~d~~~~~~~~~~~~~g~--~~-----~~~~~---~~~~~cDIl 100 (230)
T d1leha1 34 SDSLEGLAVSVQG-LGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEEGA--DA-----VAPNA---IYGVTCDIF 100 (230)
T ss_dssp SCCCTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCC--EE-----CCGGG---TTTCCCSEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEeecccHHHHHHHHHhcCC--cc-----cCCcc---cccccccEe
Confidence 3458899999999 799999999999997 89999999999888877766542 11 23332 333 89999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHH-HHHHhhHHHHHHcCCcEEec
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYS-QRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~-~~~~~~~~~a~~~g~~~i~~ 168 (429)
+-||.....+. +.+.+..+++|-=..+.... .. -++...++|+.++|.
T Consensus 101 ~PcA~~~~I~~-----~~~~~l~ak~Ive~ANn~~t~~e---a~~~L~~rGI~~iPD 149 (230)
T d1leha1 101 APCALGAVLND-----FTIPQLKAKVIAGSADNQLKDPR---HGKYLHELGIVYAPD 149 (230)
T ss_dssp EECSCSCCBST-----THHHHCCCSEECCSCSCCBSSHH---HHHHHHHHTCEECCH
T ss_pred cccccccccCh-----HHhhccCccEEEecccCCCCCch---HHHHHHhhCcEEEee
Confidence 99996543321 22345667777333212111 11 123345668776654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.11 E-value=0.016 Score=48.07 Aligned_cols=76 Identities=21% Similarity=0.223 Sum_probs=48.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEE-EeeCCC-hHHHHHHh--cCccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFA-EVNIYN-EGSLLMAL--RDVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~-~~Dl~d-~~~l~~~~--~~~DvVi~ 114 (429)
+.+|+|+|++| +|...+..+...+ ..+|++.++++++.+... +++.. ..+ ..|-.+ .+...+.. .++|++|.
T Consensus 29 GdtVlV~GaGG-~G~~~~~~~~~~g-~~~Vi~~~~~~~k~~~a~-~~Ga~-~~i~~~~~~~~~~~~~~~~~~~G~D~vid 104 (176)
T d2jhfa2 29 GSTCAVFGLGG-VGLSVIMGCKAAG-AARIIGVDINKDKFAKAK-EVGAT-ECVNPQDYKKPIQEVLTEMSNGGVDFSFE 104 (176)
T ss_dssp TCEEEEECCSH-HHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH-HTTCS-EEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCEEEEECCCC-cHHHHHHHHHHcC-CceEEeecCcHHHHHHHH-HhCCe-eEEecCCchhHHHHHHHHHhcCCCCEEEe
Confidence 46899999855 8999898888862 468999999999876544 44321 111 112222 12222222 27999999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
+.|.
T Consensus 105 ~~G~ 108 (176)
T d2jhfa2 105 VIGR 108 (176)
T ss_dssp CSCC
T ss_pred cCCc
Confidence 9875
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.10 E-value=0.0014 Score=56.50 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=74.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeC-------------CChHHHHHHh
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNI-------------YNEGSLLMAL 106 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl-------------~d~~~l~~~~ 106 (429)
|+|.|+| .|++|..++..|++. |++|++.|.+.++.+.+.+... .+..-++ .-..++.+++
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~--g~~V~g~D~n~~~i~~ln~g~~---p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i 74 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKS---PIVEPGLEALLQQGRQTGRLSGTTDFKKAV 74 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCC---SSCCTTHHHHHHHHHHTTCEEEESCHHHHH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhC--CCcEEEEeCCHHHHHHhcccCC---cccchhhhhhhhhhhcccccccCCCHHHHH
Confidence 6899998 699999999999997 8999999999988877754211 0000000 0011244556
Q ss_pred cCccEEEecCCCCCC-Cc--hHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHH--HcCCcEEecCCCccchhHHHHH
Q 014177 107 RDVDLVVHAAGPFQQ-AP--KCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAI--AANIPAITTGGIYPGVSNVMAA 181 (429)
Q Consensus 107 ~~~DvVi~~agp~~~-~~--~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~--~~g~~~i~~~g~~pG~s~~~a~ 181 (429)
+++|+++-|.+.-.. .+ ....+..+ ...+....+ ..+..+++.+...||.++-+..
T Consensus 75 ~~~d~i~i~VpTP~~~~~~~d~~~~~~~-------------------~~~i~~~~~~~~~~~liii~STv~pGtt~~~~~ 135 (202)
T d1mv8a2 75 LDSDVSFICVGTPSKKNGDLDLGYIETV-------------------CREIGFAIREKSERHTVVVRSTVLPGTVNNVVI 135 (202)
T ss_dssp HTCSEEEECCCCCBCTTSSBCCHHHHHH-------------------HHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHH
T ss_pred hhCCEEEEecCccccccccccchhhhhh-------------------hhhhhheeecccCCcceeeccccCCcchhhhhh
Confidence 789999999863211 11 01111111 111111111 2355677888888999888777
Q ss_pred HHHHHH
Q 014177 182 ELVRVA 187 (429)
Q Consensus 182 ~~~~~~ 187 (429)
.+.+..
T Consensus 136 ~~l~~~ 141 (202)
T d1mv8a2 136 PLIEDC 141 (202)
T ss_dssp HHHHHH
T ss_pred hhhhcc
Confidence 776653
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.10 E-value=0.015 Score=48.38 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=50.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHH---HHHHhc-CccEEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGS---LLMALR-DVDLVV 113 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~---l~~~~~-~~DvVi 113 (429)
.+.+|+|+|+ |.+|...+..+...+ ...|++.++++++++.. ++++. .++ +|..+.+. +.++.. ++|+||
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g-~~~v~~~~~~~~k~~~a-~~~Ga-~~~--i~~~~~~~~~~i~~~t~gg~D~vi 101 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCG-ASIIIAVDIVESRLELA-KQLGA-THV--INSKTQDPVAAIKEITDGGVNFAL 101 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHH-HHHTC-SEE--EETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccc-cceeeeeccHHHHHHHH-HHcCC-eEE--EeCCCcCHHHHHHHHcCCCCcEEE
Confidence 3468999996 889999998887762 23566778888876654 44542 233 45555433 333332 689999
Q ss_pred ecCCC
Q 014177 114 HAAGP 118 (429)
Q Consensus 114 ~~agp 118 (429)
.|+|.
T Consensus 102 d~~G~ 106 (174)
T d1f8fa2 102 ESTGS 106 (174)
T ss_dssp ECSCC
T ss_pred EcCCc
Confidence 99873
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.06 E-value=0.0033 Score=53.69 Aligned_cols=71 Identities=20% Similarity=0.230 Sum_probs=50.6
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
....+.++++.|+| +|.||+.+++.|... |.+|...++......... . .+ ...++++++++.+|+|
T Consensus 43 ~~~eL~gktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~--~--~~-------~~~~~l~~ll~~sD~i 108 (193)
T d1mx3a1 43 GAARIRGETLGIIG-LGRVGQAVALRAKAF--GFNVLFYDPYLSDGVERA--L--GL-------QRVSTLQDLLFHSDCV 108 (193)
T ss_dssp TCCCCTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECTTSCTTHHHH--H--TC-------EECSSHHHHHHHCSEE
T ss_pred CceeeeCceEEEec-cccccccceeeeecc--ccceeeccCcccccchhh--h--cc-------ccccchhhccccCCEE
Confidence 34558899999999 799999999999875 899999998654322111 1 11 1123467788889988
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
+.++.
T Consensus 109 ~~~~p 113 (193)
T d1mx3a1 109 TLHCG 113 (193)
T ss_dssp EECCC
T ss_pred EEeec
Confidence 87764
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=96.03 E-value=0.00065 Score=55.69 Aligned_cols=64 Identities=14% Similarity=0.050 Sum_probs=42.0
Q ss_pred EEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 42 VLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 42 VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
|-++| +|.+|+++++.|.+. +..+.+.+|++++++++.+...... .+ ..++++.+|+||-|..+
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~--~~~~~v~~R~~~~~~~l~~~~~~~~----~~------~~~~~~~~DiVil~v~d 65 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVYGGKA----AT------LEKHPELNGVVFVIVPD 65 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHTCCCC----CS------SCCCCC---CEEECSCT
T ss_pred EEEEe-CcHHHHHHHHHHHhC--CCEEEEEeCChhhhcchhhcccccc----cc------hhhhhccCcEEEEeccc
Confidence 45788 799999999988663 3334588999999999988764211 12 22456789999988854
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.03 E-value=0.0011 Score=54.57 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=48.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcC-----CCceEEEEecCc--hhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLC-----PDLQIVVGSRNR--EKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~-----~g~~v~v~~R~~--~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
++||.|+||+|.+|+.++..|.... ...++.+.|.+. ++++.+.-++. ...........+. ..+.++++
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 80 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDK--EEIAFKDL 80 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESC--HHHHTTTC
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcc--cccccCCc
Confidence 4699999999999999999987531 123566666543 34444433221 1111222222222 34678899
Q ss_pred cEEEecCCCCC
Q 014177 110 DLVVHAAGPFQ 120 (429)
Q Consensus 110 DvVi~~agp~~ 120 (429)
|+||-++|...
T Consensus 81 dvVVitag~~~ 91 (154)
T d5mdha1 81 DVAILVGSMPR 91 (154)
T ss_dssp SEEEECCSCCC
T ss_pred eEEEEecccCC
Confidence 99999998543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.01 E-value=0.0091 Score=48.15 Aligned_cols=73 Identities=19% Similarity=0.146 Sum_probs=50.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC-------CCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG-------KNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~-------~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
+||.|+|+ |.+|+.++..|..++ -.++++.|.++++++..+..+. ....+... .|.+ .++++|+|
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~-l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~~advv 73 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE-LGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTANSDVI 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGTTCSEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC-cceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----HhcCCCEE
Confidence 58999995 999999999998863 3589999998887665544332 12222211 2322 35789999
Q ss_pred EecCCCCC
Q 014177 113 VHAAGPFQ 120 (429)
Q Consensus 113 i~~agp~~ 120 (429)
|-+||...
T Consensus 74 vitag~~~ 81 (142)
T d1uxja1 74 VVTSGAPR 81 (142)
T ss_dssp EECCSCC-
T ss_pred EEeeeccC
Confidence 99998543
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.98 E-value=0.051 Score=40.40 Aligned_cols=88 Identities=15% Similarity=0.125 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCChHHH-HHHHHHHhHcCCCceEEEEecCchh-HHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 37 NRNARVLVLGGTGRVG-GSTAVALSKLCPDLQIVVGSRNREK-GAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG-~~l~~~L~~~~~g~~v~v~~R~~~~-~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
-+.++|.++|-+| +| +.+|+.|.++ |++|...|+.... .+.+.+ . .+.+...+- .+ .+++.|+||-
T Consensus 6 ~~~~~ihfiGigG-~GMs~LA~~L~~~--G~~VsGSD~~~~~~~~~L~~-~--Gi~v~~g~~--~~----~i~~~d~vV~ 73 (96)
T d1p3da1 6 RRVQQIHFIGIGG-AGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQ-A--GAKIYIGHA--EE----HIEGASVVVV 73 (96)
T ss_dssp TTCCEEEEETTTS-TTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHH-T--TCEEEESCC--GG----GGTTCSEEEE
T ss_pred hhCCEEEEEEECH-HHHHHHHHHHHhC--CCEEEEEeCCCChhhhHHHH-C--CCeEEECCc--cc----cCCCCCEEEE
Confidence 4568999999755 66 5679999998 8999999987543 333433 2 344443322 22 2467898887
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
..+.... .+.+.+|.+.|++.+
T Consensus 74 S~AI~~~---npel~~A~~~gipii 95 (96)
T d1p3da1 74 SSAIKDD---NPELVTSKQKRIPVI 95 (96)
T ss_dssp CTTSCTT---CHHHHHHHHTTCCEE
T ss_pred CCCcCCC---CHHHHHHHHcCCCEE
Confidence 7654332 356788999998765
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.90 E-value=0.0054 Score=58.91 Aligned_cols=91 Identities=18% Similarity=0.064 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHHH---hCCC--cEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVST---LGKN--SEFA 92 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~~---l~~~--v~~~ 92 (429)
++.+||||+|+ |.+|+.+++.|+..+-+ +++++|.+.- |.+.+++. +.+. +...
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg-~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 112 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFR-QIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH 112 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCC-CEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCC-eEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEee
Confidence 56789999997 55999999999987432 7888885421 23222222 2233 4444
Q ss_pred EeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHH
Q 014177 93 EVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIE 133 (429)
Q Consensus 93 ~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~ 133 (429)
..++.+.. .++++++|+||+|...+.. ...+-+.|..
T Consensus 113 ~~~i~~~~--~~~~~~~DlVi~~~Dn~~a--R~~in~~c~~ 149 (426)
T d1yovb1 113 FNKIQDFN--DTFYRQFHIIVCGLDSIIA--RRWINGMLIS 149 (426)
T ss_dssp CSCGGGBC--HHHHTTCSEEEECCSCHHH--HHHHHHHHHH
T ss_pred eccccchH--HHHHHhcchheeccCcHHH--HHHHHHHHHH
Confidence 44454433 4678899999999875432 1344456653
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.87 E-value=0.012 Score=47.93 Aligned_cols=41 Identities=24% Similarity=0.233 Sum_probs=33.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL 85 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l 85 (429)
||.++| .|.+|+.+++.|++. ++ +++.+|+.++...+.+..
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~--g~-~~~~~~~~~~~~~~~~~~ 42 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARR--FP-TLVWNRTFEKALRHQEEF 42 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTT--SC-EEEECSSTHHHHHHHHHH
T ss_pred eEEEEe-HHHHHHHHHHHHHhC--CC-EEEEeCCHHHHHHHHHHc
Confidence 689999 699999999999985 55 457788888877776654
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.85 E-value=0.013 Score=48.55 Aligned_cols=129 Identities=13% Similarity=0.058 Sum_probs=72.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
.+.+|.|+| +|.+|+.-++.|.+......+.+++....+. ........ ..+ +++++. ++|+|+-|
T Consensus 6 ~k~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~~---~~e~l~~~~iD~V~I~ 72 (172)
T d1lc0a1 6 GKFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE------LGSLDEVR---QIS---LEDALRSQEIDVAYIC 72 (172)
T ss_dssp CSEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSC------CCEETTEE---BCC---HHHHHHCSSEEEEEEC
T ss_pred CCcEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEeccchHH------HHHhhccC---cCC---HHHHHhCCCcchhhhc
Confidence 346899999 5999999888886531112233444322110 00000111 123 334444 78999988
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEE---eCCChhHHHHHHhhHHHHHHcCCcEEecCCCccchhHHHHHHHHH
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYID---VCDDTIYSQRAKSFKDRAIAANIPAITTGGIYPGVSNVMAAELVR 185 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vd---is~~~~~~~~~~~~~~~a~~~g~~~i~~~g~~pG~s~~~a~~~~~ 185 (429)
..+... ..++..|++.|.|.+- ++.+ ..+...+.+.++++|..+.++--.-+...-..+..+..
T Consensus 73 tp~~~H---~~~~~~al~~gk~V~~EKP~a~~---~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~ 139 (172)
T d1lc0a1 73 SESSSH---EDYIRQFLQAGKHVLVEYPMTLS---FAAAQELWELAAQKGRVLHEEHVELLKNIFLKDQDIFV 139 (172)
T ss_dssp SCGGGH---HHHHHHHHHTTCEEEEESCSCSC---HHHHHHHHHHHHHTTCCEEEECGGGGTTHHHHHHHHHH
T ss_pred cccccc---ccccccccccchhhhcCCCcccc---HHHHHHHHHHHHHcCCeEEEecHHHhhHHHHHHHHHHH
Confidence 765433 6889999999987541 1112 23444666778888888776643333333333444443
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.67 E-value=0.031 Score=46.46 Aligned_cols=75 Identities=23% Similarity=0.259 Sum_probs=48.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCchhHHHHHHHhCCCcEEEEeeCCC--hHHHHHHh--cCccEEE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN--EGSLLMAL--RDVDLVV 113 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d--~~~l~~~~--~~~DvVi 113 (429)
+.+|+|+|+ |.+|...+..+... +. .|++.++++++++ ++++++.. ..+...-.| .+.+.+.. .++|+||
T Consensus 29 G~~VlV~G~-G~iGl~a~~~ak~~--Ga~~Vi~~d~~~~r~~-~a~~~Ga~-~~i~~~~~~~~~~~~~~~~~~~G~d~vi 103 (174)
T d1e3ia2 29 GSTCAVFGL-GCVGLSAIIGCKIA--GASRIIAIDINGEKFP-KAKALGAT-DCLNPRELDKPVQDVITELTAGGVDYSL 103 (174)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHH-HHHHTTCS-EEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHHh--CCceeeeeccchHHHH-HHHHhCCC-cccCCccchhhhhhhHhhhhcCCCcEEE
Confidence 468999985 88999999998886 55 6888899988864 45556421 222211111 12222222 3799999
Q ss_pred ecCCC
Q 014177 114 HAAGP 118 (429)
Q Consensus 114 ~~agp 118 (429)
.|+|.
T Consensus 104 e~~G~ 108 (174)
T d1e3ia2 104 DCAGT 108 (174)
T ss_dssp ESSCC
T ss_pred Eeccc
Confidence 99873
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.66 E-value=0.024 Score=46.87 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=49.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC--hHHHHHHhc--CccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN--EGSLLMALR--DVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d--~~~l~~~~~--~~DvVi~ 114 (429)
+.+|+|.|+ |.+|...+..+...+ ...|++.++++++++...+ ++. ..+ .|..+ .+...+... ++|+||.
T Consensus 33 g~~vli~Ga-G~vG~~~~~~a~~~g-~~~vv~~~~~~~k~~~~~~-~ga-~~~--i~~~~~~~~~~~~~~~~~g~d~vid 106 (172)
T d1h2ba2 33 GAYVAIVGV-GGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER-LGA-DHV--VDARRDPVKQVMELTRGRGVNVAMD 106 (172)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH-TTC-SEE--EETTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCEEEEeCC-ChHHHHHHHHHHhhc-CcccccccchhHHHHHHhh-ccc-cee--ecCcccHHHHHHHhhCCCCceEEEE
Confidence 468999985 889999999887763 3477888999888775544 432 233 34433 222333332 6999999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
|+|.
T Consensus 107 ~~g~ 110 (172)
T d1h2ba2 107 FVGS 110 (172)
T ss_dssp SSCC
T ss_pred ecCc
Confidence 9873
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.64 E-value=0.015 Score=48.07 Aligned_cols=73 Identities=21% Similarity=0.206 Sum_probs=47.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC-hHHHHHHh-----cCccE
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN-EGSLLMAL-----RDVDL 111 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d-~~~l~~~~-----~~~Dv 111 (429)
+.+|+|.|++ .+|...++.+... + ..|++.++++++++ ++++++.. .. .|..+ .+.+.+.+ .++|+
T Consensus 29 G~tVlI~GaG-GvG~~aiq~ak~~--G~~~vi~~~~~~~k~~-~ak~lGa~-~~--i~~~~~~~~~~~~~~~~~~~g~D~ 101 (176)
T d2fzwa2 29 GSVCAVFGLG-GVGLAVIMGCKVA--GASRIIGVDINKDKFA-RAKEFGAT-EC--INPQDFSKPIQEVLIEMTDGGVDY 101 (176)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHH--TCSEEEEECSCGGGHH-HHHHHTCS-EE--ECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCEEEEecch-hHHHHHHHHHHHH--hcCceEEEcccHHHHH-HHHHhCCc-EE--EeCCchhhHHHHHHHHHcCCCCcE
Confidence 4689999975 5899999998887 5 46777788888765 45556522 22 23321 12222222 27999
Q ss_pred EEecCCC
Q 014177 112 VVHAAGP 118 (429)
Q Consensus 112 Vi~~agp 118 (429)
||.++|.
T Consensus 102 vid~~G~ 108 (176)
T d2fzwa2 102 SFECIGN 108 (176)
T ss_dssp EEECSCC
T ss_pred eeecCCC
Confidence 9999874
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=95.61 E-value=0.015 Score=48.35 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=47.8
Q ss_pred CCeEEEEcCChHHHHH--HHHHHhHcC--CCceEEEEecCchhHHHHHHH-------hCCCcEEEEeeCCChHHHHHHhc
Q 014177 39 NARVLVLGGTGRVGGS--TAVALSKLC--PDLQIVVGSRNREKGAAMVST-------LGKNSEFAEVNIYNEGSLLMALR 107 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~--l~~~L~~~~--~g~~v~v~~R~~~~~~~l~~~-------l~~~v~~~~~Dl~d~~~l~~~~~ 107 (429)
.+||.|+|| |.+|.. ++..|+... .+.++++.|+++++++..... ++...++.. -+| .+++++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td---~~eaL~ 75 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMN---LDDVII 75 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESC---HHHHHT
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCC---hhhccc
Confidence 479999996 778865 344444321 135999999999887654322 222222222 233 456789
Q ss_pred CccEEEecCCCC
Q 014177 108 DVDLVVHAAGPF 119 (429)
Q Consensus 108 ~~DvVi~~agp~ 119 (429)
++|+|+++++.-
T Consensus 76 dad~Vv~~~~~g 87 (171)
T d1obba1 76 DADFVINTAMVG 87 (171)
T ss_dssp TCSEEEECCCTT
T ss_pred CCCeEeeecccc
Confidence 999999998653
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.60 E-value=0.01 Score=50.14 Aligned_cols=69 Identities=20% Similarity=0.120 Sum_probs=49.7
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
...+.++++.|+| .|.||+.+++.+... +.+|+..++...+...... .++. .+++++++++|+|+
T Consensus 39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~~~~~----~~~~--------~~l~ell~~sDiv~ 103 (184)
T d1ygya1 39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAF--GAYVVAYDPYVSPARAAQL----GIEL--------LSLDDLLARADFIS 103 (184)
T ss_dssp BCCCTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEECTTSCHHHHHHH----TCEE--------CCHHHHHHHCSEEE
T ss_pred cccccceeeeecc-ccchhHHHHHHhhhc--cceEEeecCCCChhHHhhc----Ccee--------ccHHHHHhhCCEEE
Confidence 3457789999999 699999999998875 8899999987654332211 1111 23667788899988
Q ss_pred ecCC
Q 014177 114 HAAG 117 (429)
Q Consensus 114 ~~ag 117 (429)
.++.
T Consensus 104 ~~~P 107 (184)
T d1ygya1 104 VHLP 107 (184)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 7764
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.54 E-value=0.022 Score=46.06 Aligned_cols=35 Identities=26% Similarity=0.457 Sum_probs=31.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
+++++|||+|| |.+|..-++.|++. |.+|++++..
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~--GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPT--GCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGG--TCEEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 67899999996 88999999999998 8899998643
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=95.53 E-value=0.064 Score=39.24 Aligned_cols=87 Identities=13% Similarity=0.086 Sum_probs=57.4
Q ss_pred CCeEEEEcCChHHHH-HHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 39 NARVLVLGGTGRVGG-STAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~-~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+|||-++|-+| +|. .+|+.|.++ |+.|...|++....-+..+.. .+++... .+.+ .++++|+||-..+
T Consensus 1 ~~~ihfiGIgG-~GMs~LA~~L~~~--G~~VsGSD~~~~~~t~~L~~~--Gi~i~~g--h~~~----~i~~~d~vV~SsA 69 (89)
T d1j6ua1 1 HMKIHFVGIGG-IGMSAVALHEFSN--GNDVYGSNIEETERTAYLRKL--GIPIFVP--HSAD----NWYDPDLVIKTPA 69 (89)
T ss_dssp CCEEEEETTTS-HHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHT--TCCEESS--CCTT----SCCCCSEEEECTT
T ss_pred CcEEEEEeECH-HHHHHHHHHHHhC--CCeEEEEeCCCChhHHHHHHC--CCeEEee--eccc----ccCCCCEEEEecC
Confidence 37899999766 665 578888887 899999998764333223333 3444322 1222 2467999887766
Q ss_pred CCCCCchHHHHHHHHHcCCcEE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~v 139 (429)
.... .+.+++|++.|++..
T Consensus 70 I~~~---npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 70 VRDD---NPEIVRARMERVPIE 88 (89)
T ss_dssp CCTT---CHHHHHHHHTTCCEE
T ss_pred cCCC---CHHHHHHHHcCCCcc
Confidence 4433 367899999998754
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.50 E-value=0.015 Score=49.04 Aligned_cols=71 Identities=15% Similarity=0.113 Sum_probs=49.9
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
...+..+++.|+| +|.||+.+++.|... +.+|...++.......... .. + ....++.++++++|+|+
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~-~~--~-------~~~~~l~~~l~~sD~v~ 105 (188)
T d2naca1 39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKE-LN--L-------TWHATREDMYPVCDVVT 105 (188)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHH-HT--C-------EECSSHHHHGGGCSEEE
T ss_pred ceeccccceeecc-ccccchhhhhhhhcc--CceEEEEeecccccccccc-cc--c-------cccCCHHHHHHhccchh
Confidence 3457889999999 799999999999886 7899999986543222211 11 1 11234667888999987
Q ss_pred ecCC
Q 014177 114 HAAG 117 (429)
Q Consensus 114 ~~ag 117 (429)
.++.
T Consensus 106 ~~~p 109 (188)
T d2naca1 106 LNCP 109 (188)
T ss_dssp ECSC
T ss_pred hccc
Confidence 7764
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.48 E-value=0.022 Score=46.64 Aligned_cols=72 Identities=18% Similarity=0.146 Sum_probs=48.4
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHH---HHHhcCccEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSL---LMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l---~~~~~~~DvVi~~ 115 (429)
+.+|+|+|+ |.+|..++..+... |.+|++.++++++++.. ++++.. . ..|..+.+.. .+...+.|.+|-+
T Consensus 28 g~~VlV~Ga-G~vG~~~~~~ak~~--G~~Vi~~~~~~~~~~~a-~~~Ga~-~--~i~~~~~~~~~~~~~~~~g~~~~i~~ 100 (166)
T d1llua2 28 GQWVAISGI-GGLGHVAVQYARAM--GLHVAAIDIDDAKLELA-RKLGAS-L--TVNARQEDPVEAIQRDIGGAHGVLVT 100 (166)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH-HHTTCS-E--EEETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred CCEEEEeec-cccHHHHHHHHHHc--CCccceecchhhHHHhh-hccCcc-c--cccccchhHHHHHHHhhcCCcccccc
Confidence 568999986 88999988887775 78999999999887654 445421 2 2455554433 3333466666666
Q ss_pred CC
Q 014177 116 AG 117 (429)
Q Consensus 116 ag 117 (429)
++
T Consensus 101 ~~ 102 (166)
T d1llua2 101 AV 102 (166)
T ss_dssp CS
T ss_pred cc
Confidence 54
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.43 E-value=0.026 Score=49.02 Aligned_cols=75 Identities=9% Similarity=0.156 Sum_probs=50.5
Q ss_pred CCCCCeEEEEcC----------------ChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh
Q 014177 36 KNRNARVLVLGG----------------TGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE 99 (429)
Q Consensus 36 ~~~~~~VlV~Ga----------------~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~ 99 (429)
++.+++||||+| +|.+|.+|++.+..+ |++|+++...... ..+..+..+ .+...
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~--Ga~V~li~g~~~~------~~p~~~~~~--~~~t~ 72 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVSL------PTPPFVKRV--DVMTA 72 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCCC------CCCTTEEEE--ECCSH
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHc--CCchhhhhccccc------Ccccccccc--eehhh
Confidence 567788888854 689999999999998 8999887643321 111234444 44444
Q ss_pred HHHH----HHhcCccEEEecCCCCC
Q 014177 100 GSLL----MALRDVDLVVHAAGPFQ 120 (429)
Q Consensus 100 ~~l~----~~~~~~DvVi~~agp~~ 120 (429)
+++. +.++++|++|++|+...
T Consensus 73 ~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 73 LEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred HHHHHHHHhhhccceeEeeeechhh
Confidence 4433 34468999999997643
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.42 E-value=0.029 Score=46.71 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=50.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCC-ceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC-hHHHHHHh--cCccEEEe
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPD-LQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN-EGSLLMAL--RDVDLVVH 114 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g-~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d-~~~l~~~~--~~~DvVi~ 114 (429)
+..|+|+|+ |.+|...+..+... + .+|++.|++.++++ ++++++....+-.-|-.+ .+.+.+.. .++|++|.
T Consensus 30 g~tVlI~G~-GgvGl~ai~~ak~~--G~~~Vi~vd~~~~kl~-~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~ 105 (176)
T d1d1ta2 30 GSTCVVFGL-GGVGLSVIMGCKSA--GASRIIGIDLNKDKFE-KAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFE 105 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGGGHH-HHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred CCEEEEECC-CchhHHHHHHHHHc--CCceEEEecCcHHHHH-HHHhcCCcEEECccccchHHHHHHHHhccccceEEEE
Confidence 468999985 77999999999876 5 58999999999977 455555321111112222 22233333 37999999
Q ss_pred cCCC
Q 014177 115 AAGP 118 (429)
Q Consensus 115 ~agp 118 (429)
+.|.
T Consensus 106 ~~g~ 109 (176)
T d1d1ta2 106 VIGH 109 (176)
T ss_dssp CSCC
T ss_pred eCCc
Confidence 9874
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.28 E-value=0.017 Score=44.79 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=68.4
Q ss_pred CeEEEEcCC---hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 40 ARVLVLGGT---GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 40 ~~VlV~Ga~---G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
|+|.|+|++ +..|..+.+.|.+. |++|+.+..+.+.. . .+.-..++.++-..+|+++-+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pVnP~~~~i-----------~----G~~~y~sl~~lp~~~D~vvi~v 64 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-----------E----GLKCYRSVRELPKDVDVIVFVV 64 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----------T----TEECBSSGGGSCTTCCEEEECS
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEEccccccc-----------c----CccccccchhccccceEEEEEe
Confidence 689999987 67899999999997 78888775433211 0 1111233444445789999887
Q ss_pred CCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 117 GPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 117 gp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
.+... ..+++.|.+.|++.+-+..... . ..+.+.++++|+.++
T Consensus 65 p~~~~---~~~l~~~~~~g~k~v~~~~g~~-~---~~~~~~a~~~gi~vi 107 (116)
T d1y81a1 65 PPKVG---LQVAKEAVEAGFKKLWFQPGAE-S---EEIRRFLEKAGVEYS 107 (116)
T ss_dssp CHHHH---HHHHHHHHHTTCCEEEECTTSC-C---HHHHHHHHHHTCEEE
T ss_pred CHHHH---HHHHHHHHhcCCceEEeccchh-h---HHHHHHHHHcCCEEE
Confidence 65433 6889999999999876543321 1 133456777887653
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.27 E-value=0.024 Score=51.07 Aligned_cols=119 Identities=21% Similarity=0.202 Sum_probs=70.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-----------cCchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-----------RNREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-----------R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
.++++++|+|-| .|.||+++++.|.+. |.+|+.++ .+.+.+.+.....+....+....+.+ +
T Consensus 32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~--Gakvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~-~--- 104 (293)
T d1hwxa1 32 PGFGDKTFAVQG-FGNVGLHSMRYLHRF--GAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-G--- 104 (293)
T ss_dssp SSSTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCC-S---
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHC--CCEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCC-c---
Confidence 458889999999 799999999999997 78887654 23445555444322111000011112 1
Q ss_pred HHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 104 MALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 104 ~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
+++. +||+++-||-...... +.+.+.++++|-=.......... ++...++|+.++|+
T Consensus 105 ~~~~~~~DIliPaA~~~~I~~-----~~a~~l~ak~I~EgAN~P~t~eA---~~~L~~~gI~viPD 162 (293)
T d1hwxa1 105 SILEVDCDILIPAASEKQLTK-----SNAPRVKAKIIAEGANGPTTPQA---DKIFLERNIMVIPD 162 (293)
T ss_dssp CGGGCCCSEEEECSSSSCBCT-----TTGGGCCCSEEECCSSSCBCHHH---HHHHHHTTCEEECH
T ss_pred ccccCCccEEeeccccccccH-----HHHHHHhhCEEeccCCCCCCcch---HHHHHHCCCEEeCh
Confidence 2333 8999999996543321 22334577877544333332222 34456788888876
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.25 E-value=0.066 Score=45.39 Aligned_cols=39 Identities=15% Similarity=0.200 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
..+.+++|.|+| +|.||+.+++.|... |.+|++.++...
T Consensus 41 ~~l~~ktvgIiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~ 79 (199)
T d1dxya1 41 KELGQQTVGVMG-TGHIGQVAIKLFKGF--GAKVIAYDPYPM 79 (199)
T ss_dssp CCGGGSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSCC
T ss_pred ccccceeeeeee-ccccccccccccccc--ceeeeccCCccc
Confidence 457789999999 799999999999876 899999998654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.22 E-value=0.015 Score=49.11 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=47.2
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
.+..++|.|+| +|.||+.+++.|... +.+|...++...... . .... + ++++++++.+|+|+.+
T Consensus 41 ~l~~~~vgiiG-~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~-------~--~~~~--~---~~l~ell~~sDii~i~ 103 (188)
T d1sc6a1 41 EARGKKLGIIG-YGHIGTQLGILAESL--GMYVYFYDIENKLPL-------G--NATQ--V---QHLSDLLNMSDVVSLH 103 (188)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSCCCCC-------T--TCEE--C---SCHHHHHHHCSEEEEC
T ss_pred cccceEEEEee-cccchhhhhhhcccc--cceEeeccccccchh-------h--hhhh--h---hhHHHHHhhccceeec
Confidence 57889999998 799999999999875 899999987643210 0 1111 1 2466778888988777
Q ss_pred CC
Q 014177 116 AG 117 (429)
Q Consensus 116 ag 117 (429)
+.
T Consensus 104 ~p 105 (188)
T d1sc6a1 104 VP 105 (188)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=95.21 E-value=0.08 Score=43.40 Aligned_cols=98 Identities=21% Similarity=0.179 Sum_probs=63.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---------CCcE------------EEEeeCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---------KNSE------------FAEVNIYN 98 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---------~~v~------------~~~~Dl~d 98 (429)
+||.|-| -|.||+.+.|.+.++ ++.+|+...- ....+.++..+. ..++ +....-.|
T Consensus 2 ikigING-FGRIGR~v~R~~~~~-~~i~ivaINd-~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~ 78 (166)
T d1gado1 2 IKVGING-FGRIGRIVFRAAQKR-SDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD 78 (166)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTC-SSEEEEEEEC-SSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEEC-CcHHHHHHHHHHhhC-CCeEEEEEeC-CCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC
Confidence 5789998 899999999999985 5788777653 233343332221 1111 11122234
Q ss_pred hHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
++.+.=--.++|+||-|.|.|.. ..-++.-++.|++.|-++.
T Consensus 79 p~~i~W~~~gvDiViEcTG~f~t---~~~~~~hl~~gakkViiSa 120 (166)
T d1gado1 79 PANLKWDEVGVDVVAEATGLFLT---DETARKHITAGAKKVVMTG 120 (166)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCS---HHHHTHHHHTTCSEEEESS
T ss_pred hHHCCccccCCCEEEEccccccC---HHHHHHHhcCCCceEEeec
Confidence 44332111289999999999875 5667778899999998875
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=95.14 E-value=0.07 Score=43.94 Aligned_cols=98 Identities=14% Similarity=0.213 Sum_probs=64.2
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---------CCc------------EEEEeeCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---------KNS------------EFAEVNIYN 98 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---------~~v------------~~~~~Dl~d 98 (429)
+||.|-| -|.||+.+.+.|.++ +.+|+... +....+.++..+. ..+ .+....-.|
T Consensus 1 ikigING-fGRIGR~~~R~l~~~--~i~iv~IN-d~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~ 76 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSR--GVEVALIN-DLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD 76 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHH--TCCEEEEE-CSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEC-CcHHHHHHHHHHhcC--CCEEEEEC-CCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC
Confidence 5789998 899999999999887 77877664 2333444332211 111 112223334
Q ss_pred hHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
++++.=.-.++|+|+-|.|.|.. ..-++..++.|++.|-+|..
T Consensus 77 p~~i~W~~~gvdiViEcTG~f~~---~~~~~~hl~~gakkViiSAP 119 (168)
T d2g82a1 77 PKEIPWAEAGVGVVIESTGVFTD---ADKAKAHLEGGAKKVIITAP 119 (168)
T ss_dssp GGGCCTGGGTEEEEEECSSSCCB---HHHHTHHHHTTCSEEEESSC
T ss_pred hHHCcccccCCceeEeccccccc---hHHhhhhhccccceeeeccc
Confidence 44443222379999999998865 56778888999999988743
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.09 E-value=0.012 Score=49.64 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=35.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHH
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMV 82 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~ 82 (429)
-++|.|+|+ |.+|+.++..++.. |++|++.|++++.+++..
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~--G~~V~l~D~~~~~l~~~~ 44 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASK--GTPILMKDINEHGIEQGL 44 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhC--CCeEEEEECCHHHHhhhh
Confidence 368999995 99999999999987 899999999988766543
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.94 E-value=0.098 Score=43.93 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=63.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcC---CCceEEEE-ec--CchhHHHHHHH------hCCCcEE------------EE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLC---PDLQIVVG-SR--NREKGAAMVST------LGKNSEF------------AE 93 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~---~g~~v~v~-~R--~~~~~~~l~~~------l~~~v~~------------~~ 93 (429)
|+++|.|-| -|.||+.+.+.+.++. +..+|+.. +. +.+.+..+.+. ++..++. ..
T Consensus 1 M~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~~~i 79 (190)
T d1k3ta1 1 MPIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLV 79 (190)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHHEETTTEECSSCEEEECSSTTCSSCCEEE
T ss_pred CCeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhhccccccCCCceEEEccCccccccccceE
Confidence 357899999 8999999999988752 24455543 22 33444444331 1111111 00
Q ss_pred --------e-eCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 94 --------V-NIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 94 --------~-Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
. .-.|++++.=--.++|+||-|.|.|.. ...++.-++.|++.|-+|.
T Consensus 80 ~~g~~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~---~~~a~~hl~~GakkViiSA 135 (190)
T d1k3ta1 80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTA---KAAAEGHLRGGARKVVISA 135 (190)
T ss_dssp ETTEEEEEEECCSCGGGSCHHHHTCCEEEECSSSCCB---HHHHTHHHHTTCSEEEESS
T ss_pred EcCceEEecccCCChhHCCHhhcCCcEEEEecccccc---cccchhhcccCcceeeecc
Confidence 1 123344332111289999999998875 5778888999999998875
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=94.77 E-value=0.019 Score=48.28 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=56.0
Q ss_pred CeEEEE-cCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHH---HHHhCCCcEEEEe---eCCCh-HHHHHHh----c
Q 014177 40 ARVLVL-GGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAM---VSTLGKNSEFAEV---NIYNE-GSLLMAL----R 107 (429)
Q Consensus 40 ~~VlV~-Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l---~~~l~~~v~~~~~---Dl~d~-~~l~~~~----~ 107 (429)
.+++|. ||+|.+|..+++..... |++++++.|+.++.++. .++++.. ..+.- |..+. +.+.+.. .
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~--Ga~vI~~v~~~~~~~~~~~~~~~lGad-~vi~~~~~~~~~~~~~v~~~~~~~g~ 106 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSGG 106 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCchHHHHHHHHHhhc--CCeEEEEEecccccchHHhhhhhcccc-EEEeccccchhHHHHHHHHHHhhccC
Confidence 568886 78899999999988776 89999888776654433 3344421 12221 22221 1233332 3
Q ss_pred CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 108 DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 108 ~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
++|+|+++.|.... ...+ .|++.+-+++.+.
T Consensus 107 ~vdvv~D~vg~~~~---~~~~-~~l~~~G~~v~~G 137 (189)
T d1gu7a2 107 EAKLALNCVGGKSS---TGIA-RKLNNNGLMLTYG 137 (189)
T ss_dssp CEEEEEESSCHHHH---HHHH-HTSCTTCEEEECC
T ss_pred CceEEEECCCcchh---hhhh-hhhcCCcEEEEEC
Confidence 69999999873211 2222 3344555666553
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.77 E-value=0.03 Score=44.76 Aligned_cols=105 Identities=15% Similarity=0.105 Sum_probs=70.5
Q ss_pred CCCeEEEEcCC---hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGT---GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~---G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
..++|.|+|++ +..|..+++.|.+. |++|+.+..+.+.. .-..+ ..++.++-..+|+|+-
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pVnP~~~~i-----------~G~~~----~~sl~dlp~~iD~v~i 80 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKYEEV-----------LGRKC----YPSVLDIPDKIEVVDL 80 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----------TTEEC----BSSGGGCSSCCSEEEE
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEECCccccc-----------CCCcc----cccccccCccceEEEE
Confidence 46899999988 78999999999997 78888876432211 10111 2234444557999998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEE
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAI 166 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i 166 (429)
+..+... ..+++.|.+.|++.+-+.... +.+ ...+.++++|+.++
T Consensus 81 ~vp~~~~---~~~~~e~~~~g~k~v~~~~G~-~~e---e~~~~a~~~gi~vi 125 (139)
T d2d59a1 81 FVKPKLT---MEYVEQAIKKGAKVVWFQYNT-YNR---EASKKADEAGLIIV 125 (139)
T ss_dssp CSCHHHH---HHHHHHHHHHTCSEEEECTTC-CCH---HHHHHHHHTTCEEE
T ss_pred EeCHHHH---HHHHHHHHHhCCCEEEEeccc-cCH---HHHHHHHHCCCEEE
Confidence 8876543 789999999999987664332 111 23456777887653
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.75 E-value=0.057 Score=45.62 Aligned_cols=74 Identities=27% Similarity=0.308 Sum_probs=49.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh---HHHHHHhc--CccEE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE---GSLLMALR--DVDLV 112 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~---~~l~~~~~--~~DvV 112 (429)
.+.+|+|+|+ |.+|...+..+...+ ..+|+++++++++++.. ++++ .+. ..|-.+. +.+.++.. ++|++
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~g-a~~Vi~~d~~~~rl~~a-~~~G--a~~-~~~~~~~~~~~~i~~~t~g~g~D~v 98 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLG-AAVVIVGDLNPARLAHA-KAQG--FEI-ADLSLDTPLHEQIAALLGEPEVDCA 98 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHH-HHTT--CEE-EETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhc-ccceeeecccchhhHhh-hhcc--ccE-EEeCCCcCHHHHHHHHhCCCCcEEE
Confidence 3469999985 789988888876652 34899999998887654 4443 333 2343333 23444443 69999
Q ss_pred EecCC
Q 014177 113 VHAAG 117 (429)
Q Consensus 113 i~~ag 117 (429)
|.+.|
T Consensus 99 id~vG 103 (195)
T d1kola2 99 VDAVG 103 (195)
T ss_dssp EECCC
T ss_pred EECcc
Confidence 99997
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=94.70 E-value=0.15 Score=42.05 Aligned_cols=99 Identities=19% Similarity=0.145 Sum_probs=61.4
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcC--CCceEEEEecCchhHHHHHHHh---------CCCc------------EEEEeeC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLC--PDLQIVVGSRNREKGAAMVSTL---------GKNS------------EFAEVNI 96 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~--~g~~v~v~~R~~~~~~~l~~~l---------~~~v------------~~~~~Dl 96 (429)
+||.|-| -|.||+.+.|.+.++. ++.+|+... ++...+.++..+ +..+ ......-
T Consensus 2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaIN-d~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~ 79 (173)
T d1obfo1 2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIN-DLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN 79 (173)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEE-CSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEc-CCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEec
Confidence 5899998 8999999999998642 345665554 222333333221 1111 1112222
Q ss_pred CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
.|++.+.=.-.++|+|+-|.|.|.. ..-++.-++.|+++|-++.
T Consensus 80 ~~p~~i~W~~~gvDiViEcTG~f~~---~~~a~~hl~~GakkViiSA 123 (173)
T d1obfo1 80 RNPAQLPWGALKVDVVLECTGFFTT---KEKAGAHIKGGAKKVIISA 123 (173)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCS---HHHHHHHHHHTCSEEEESS
T ss_pred CCHHHCcccccccceEEEecccccC---HHHHHHHhccCCcceEEec
Confidence 3444332112279999999998865 5667778889999998875
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.66 E-value=0.13 Score=42.21 Aligned_cols=99 Identities=12% Similarity=0.127 Sum_probs=63.6
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEec---CchhHHHHHHH------hCCCcE------------EEEeeCCCh
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR---NREKGAAMVST------LGKNSE------------FAEVNIYNE 99 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R---~~~~~~~l~~~------l~~~v~------------~~~~Dl~d~ 99 (429)
||.|-| -|.||+.+.+.++++ ++.+|+...- +.+.+..+.+. ++..++ +....-.|+
T Consensus 2 kigING-fGRIGR~v~R~~~~~-~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p 79 (166)
T d2b4ro1 2 KLGING-FGRIGRLVFRAAFGR-KDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP 79 (166)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTC-SSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred eEEEEC-CCHHHHHHHHHHhhC-CCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCCh
Confidence 688888 899999999999985 5778777642 23444444331 011111 111222344
Q ss_pred HHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 100 GSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 100 ~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+.+.=.-.++|+|+-|.|.|.. ...++.-++.|+++|-++..
T Consensus 80 ~~i~W~~~gvdiViEcTG~f~~---~~~~~~hl~~gakkViiSAP 121 (166)
T d2b4ro1 80 SQIPWGKCQVDVVCESTGVFLT---KELASSHLKGGAKKVIMSAP 121 (166)
T ss_dssp GGCCHHHHTCSEEEECSSSCCS---HHHHTHHHHTTCSEEEESSC
T ss_pred HHccccccCCCEEEEecccccc---hhhhhhhhccCCCEEEEecc
Confidence 4332111289999999999875 56777888999999988753
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=94.66 E-value=0.015 Score=45.73 Aligned_cols=86 Identities=10% Similarity=0.065 Sum_probs=55.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-CccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR-DVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~-~~DvVi~~ag 117 (429)
.+|+|+|| |..|+++++.+.. ..++++++. |-++.+... .+ ..+... + .+.+.+..+ ..++++-+..
T Consensus 4 ~~v~I~Ga-G~~G~~l~~~l~~-~~~~~iv~fiDdd~~k~G~---~I-~Gi~V~--~---~~~l~~~~~~~i~iai~~i~ 72 (126)
T d2dt5a2 4 WGLCIVGM-GRLGSALADYPGF-GESFELRGFFDVDPEKVGR---PV-RGGVIE--H---VDLLPQRVPGRIEIALLTVP 72 (126)
T ss_dssp EEEEEECC-SHHHHHHHHCSCC-CSSEEEEEEEESCTTTTTC---EE-TTEEEE--E---GGGHHHHSTTTCCEEEECSC
T ss_pred ceEEEEcC-CHHHHHHHHhHhh-cCCcEEEEEEeCchHhcCC---EE-CCEEEe--c---HHHHHHHHhhcccEEEEeCC
Confidence 48999995 8999999998765 357877764 556554211 11 123332 3 344555555 5777777764
Q ss_pred CCCCCchHHHHHHHHHcCCcEE
Q 014177 118 PFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 118 p~~~~~~~~v~~aa~~~gv~~v 139 (429)
... ...+++.|.+.|++.+
T Consensus 73 ~~~---~~~I~d~l~~~gIk~I 91 (126)
T d2dt5a2 73 REA---AQKAADLLVAAGIKGI 91 (126)
T ss_dssp HHH---HHHHHHHHHHHTCCEE
T ss_pred HHH---HHHHHHHHHHcCCCEE
Confidence 322 2678999999999865
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.46 E-value=0.038 Score=45.08 Aligned_cols=73 Identities=22% Similarity=0.207 Sum_probs=48.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh---HHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE---GSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~---~~l~~~~~~~DvVi~ 114 (429)
.+.+|+|.|+ |-+|...+..+... +.+|++.++++++++... +++ .+.+ .|..+. +.+.+...+.|.+|.
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~--g~~v~~~~~~~~r~~~~k-~~G--a~~~-~~~~~~~~~~~~~~~~~~~~~~v~ 99 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAK-ELG--ADLV-VNPLKEDAAKFMKEKVGGVHAAVV 99 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHT--TCEEEEECSCHHHHHHHH-HTT--CSEE-ECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CCCEEEEeec-ccchhhhhHHHhcC--CCeEeccCCCHHHhhhhh-hcC--ccee-cccccchhhhhcccccCCCceEEe
Confidence 3468999985 77999988888775 789999999999877554 454 2222 333332 234444556666666
Q ss_pred cCC
Q 014177 115 AAG 117 (429)
Q Consensus 115 ~ag 117 (429)
+++
T Consensus 100 ~~~ 102 (168)
T d1rjwa2 100 TAV 102 (168)
T ss_dssp SSC
T ss_pred ecC
Confidence 664
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=94.46 E-value=0.12 Score=42.57 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=61.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec---CchhHHHHHHH------hCCCc------------EEEEeeCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR---NREKGAAMVST------LGKNS------------EFAEVNIYN 98 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R---~~~~~~~l~~~------l~~~v------------~~~~~Dl~d 98 (429)
-||.|-| .|.||+.+.+.+.++ ++.+++...- +.+.+..+.+. ++..+ ......-.|
T Consensus 2 ikIgING-FGRIGR~v~R~~~~~-~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~ 79 (169)
T d1u8fo1 2 VKVGVNG-FGRIGRLVTRAAFNS-GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 79 (169)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHH-CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred cEEEEEC-CcHHHHHHHHHHHHC-CCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC
Confidence 4799998 899999999999986 4678777643 23334444331 01111 112222334
Q ss_pred hHHHHHHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 99 EGSLLMALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 99 ~~~l~~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
++++. .-+ ++|+|+-|.|.|.. ..-++.-++.|++.|-++.
T Consensus 80 p~~i~-W~~~~vDiViEcTG~f~~---~~~~~~hl~~gakkViiSa 121 (169)
T d1u8fo1 80 PSKIK-WGDAGAEYVVESTGVFTT---MEKAGAHLQGGAKRVIISA 121 (169)
T ss_dssp GGGCC-TTTTTCCEEEECSSSCCS---HHHHGGGGGGTCSEEEESS
T ss_pred hhhCC-ccccCCCEEEEecceecc---HHHHHHHHhcCCceEeecc
Confidence 44332 111 79999999999875 4555556788999998875
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=94.37 E-value=0.1 Score=42.97 Aligned_cols=75 Identities=24% Similarity=0.229 Sum_probs=49.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh----HHHHHHh--cCccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE----GSLLMAL--RDVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~----~~l~~~~--~~~Dv 111 (429)
.+.+|+|+|+ |.+|...+..+...+ ..+|++.|++.++++.. ++++.. .+ .|..+. +...+.. .+.|+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G-~~~Vi~~d~~~~kl~~a-~~lGa~-~~--i~~~~~d~~~~~~~~~~~~~G~d~ 100 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKA-IELGAT-EC--LNPKDYDKPIYEVICEKTNGGVDY 100 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHH-HHTTCS-EE--ECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcC-CceeeccCChHHHHHHH-HHcCCc-EE--EcCCCchhHHHHHHHHhcCCCCcE
Confidence 3568999995 779999999998872 24799999999887654 445421 22 233221 2222222 27999
Q ss_pred EEecCCC
Q 014177 112 VVHAAGP 118 (429)
Q Consensus 112 Vi~~agp 118 (429)
||.++|.
T Consensus 101 vid~~g~ 107 (174)
T d1p0fa2 101 AVECAGR 107 (174)
T ss_dssp EEECSCC
T ss_pred EEEcCCC
Confidence 9999874
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=94.34 E-value=0.21 Score=40.99 Aligned_cols=99 Identities=18% Similarity=0.226 Sum_probs=61.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHc-CCCceEEEEecCchhHHHHHHHh---------CCCcE------------EEEeeCCC
Q 014177 41 RVLVLGGTGRVGGSTAVALSKL-CPDLQIVVGSRNREKGAAMVSTL---------GKNSE------------FAEVNIYN 98 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~-~~g~~v~v~~R~~~~~~~l~~~l---------~~~v~------------~~~~Dl~d 98 (429)
||.|-| .|.||+.+.+.+.++ .++.+|+...- ....+.++..+ +..++ +....-.+
T Consensus 2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd-~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~ 79 (169)
T d1hdgo1 2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAIND-LTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (169)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEEC-SSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred EEEEEC-CChHHHHHHHHHHhccCCCEEEEEecc-CccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence 788898 899999999999875 34577776542 22333333221 11111 11122234
Q ss_pred hHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
++++.=--.++|+||-|.|.|.. ..-++.-++.|+++|-+|..
T Consensus 80 p~~i~W~~~gvD~ViEcTG~f~t---~~~~~~hl~~GakkViiSAP 122 (169)
T d1hdgo1 80 PSKLPWKDLGVDFVIESTGVFRN---REKAELHLQAGAKKVIITAP 122 (169)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCB---HHHHTHHHHTTCSEEEESSC
T ss_pred hhhCCccccCCCEEEEecceecc---ccchhhhccCCCceEEEecc
Confidence 44332111279999999999875 56677778899999988753
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.32 E-value=0.017 Score=47.94 Aligned_cols=102 Identities=17% Similarity=0.150 Sum_probs=63.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeC--CChHHHHHHhcCccEEE
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNI--YNEGSLLMALRDVDLVV 113 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl--~d~~~l~~~~~~~DvVi 113 (429)
++.+|+++|+|-+.-+|+-++..|+++ +..|+.++.+........... .-......|+ ...+.+++....+|+||
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~--gaTVt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lk~~~~~aDIvI 102 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGESL-KLNKHHVEDLGEYSEDLLKKCSLDSDVVI 102 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCCS-SCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHC--CCEEEEeccccccccccccce-eeeeeccccccccchhHHhhccccCCEEE
Confidence 688999999999999999999999987 889988875432100000000 0011122222 34566888888999999
Q ss_pred ecCCCCCC-CchHHHHHHHHHcCCcEEEeCCCh
Q 014177 114 HAAGPFQQ-APKCTVLEAAIETKTAYIDVCDDT 145 (429)
Q Consensus 114 ~~agp~~~-~~~~~v~~aa~~~gv~~vdis~~~ 145 (429)
.++|.... .. .. -++.|.-.+|++.+.
T Consensus 103 savG~p~~~i~-~d----~ik~GavvIDvGi~~ 130 (171)
T d1edza1 103 TGVPSENYKFP-TE----YIKEGAVCINFACTK 130 (171)
T ss_dssp ECCCCTTCCBC-TT----TSCTTEEEEECSSSC
T ss_pred EccCCCccccC-hh----hcccCceEeeccccc
Confidence 99975332 11 01 134566677876543
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=94.32 E-value=0.025 Score=46.17 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=31.8
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
+|||+|+|| |++|..++..|.+.+++.+|++.++++
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 589999995 999999999999987778999988765
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.31 E-value=0.014 Score=57.54 Aligned_cols=104 Identities=13% Similarity=0.043 Sum_probs=65.1
Q ss_pred CCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch-------------------hHHHHHH---HhCCCcEE
Q 014177 34 QMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE-------------------KGAAMVS---TLGKNSEF 91 (429)
Q Consensus 34 ~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~-------------------~~~~l~~---~l~~~v~~ 91 (429)
++.+...+|+|+|+ |.+|..+++.|+..+- -+++++|.+.- +++.+++ ++.+.++.
T Consensus 20 Q~~L~~s~VlvvG~-gglG~Ei~knLvl~GV-g~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i 97 (529)
T d1yova1 20 QEALESAHVCLINA-TATGTEILKNLVLPGI-GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSG 97 (529)
T ss_dssp HHHHHHCEEEECCC-SHHHHHHHHHHHTTTC-SEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBC
T ss_pred HHHHhCCCEEEECC-CHHHHHHHHHHHHhcC-CEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcE
Confidence 34466789999996 5699999999998632 27888875432 2222222 22333333
Q ss_pred EEeeCCChHHH----HHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeC
Q 014177 92 AEVNIYNEGSL----LMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVC 142 (429)
Q Consensus 92 ~~~Dl~d~~~l----~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis 142 (429)
...+. +.+.+ .++++++|+||.+..+... ...+-+.|.+.++++|...
T Consensus 98 ~~~~~-~~~~~~~~~~~~~~~~dvVv~~~~~~~~--~~~l~~~c~~~~ip~i~~~ 149 (529)
T d1yova1 98 SFVEE-SPENLLDNDPSFFCRFTVVVATQLPEST--SLRLADVLWNSQIPLLICR 149 (529)
T ss_dssp CEESS-CHHHHHHSCGGGGGGCSEEEEESCCHHH--HHHHHHHHHHHTCCEEEEE
T ss_pred EEEcC-CchhhhhhHHHHhcCCCEEEECCCCHHH--HHHHHHHHHHcCCCEEEEe
Confidence 22322 22222 2456789999988764432 2567889999999987543
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=94.22 E-value=0.18 Score=41.42 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=62.2
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---------CCcE------------EEEeeCCCh
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---------KNSE------------FAEVNIYNE 99 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---------~~v~------------~~~~Dl~d~ 99 (429)
||.|-| -|.||+.+.+.+.++ ++.+++...- +...+.++..+. ..++ +....-.|+
T Consensus 3 kIgING-fGRIGR~v~R~~l~~-~~~~ivaINd-~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p 79 (171)
T d3cmco1 3 KVGING-FGRIGRNVFRAALKN-PDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (171)
T ss_dssp EEEEES-CSHHHHHHHHHHTTC-TTEEEEEEEC-SSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred EEEEEC-CCHHHHHHHHHHhhC-CCcEEEEEcC-CCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCH
Confidence 688888 799999999999985 6788777652 333344332221 1111 112222344
Q ss_pred HHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 100 GSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 100 ~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
+++.=--.++|+||-|.|.|.. ..-++.-++.|++.|-++..
T Consensus 80 ~~i~W~~~~vDiViEcTG~f~t---~~~~~~hl~~gakkViiSap 121 (171)
T d3cmco1 80 ENLAWGEIGVDIVVESTGRFTK---REDAAKHLEAGAKKVIISAP 121 (171)
T ss_dssp GGCCTGGGTCCEEEECSSSCCB---HHHHTHHHHTTCSEEEESSC
T ss_pred HHccccccCCcEEEEecCccCC---HHHHHHHHhCCCceEEEecc
Confidence 3322111279999999999865 45566678889999988743
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=94.21 E-value=0.099 Score=43.01 Aligned_cols=97 Identities=14% Similarity=0.161 Sum_probs=60.0
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEec---CchhHHHHHHH------hCCCcE------------EEEeeCCCh
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR---NREKGAAMVST------LGKNSE------------FAEVNIYNE 99 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R---~~~~~~~l~~~------l~~~v~------------~~~~Dl~d~ 99 (429)
||.|-| -|.||+.+.+.+.++ +.+++...- +.+.+..+.+. ++..++ +....-.++
T Consensus 2 kIgING-fGRIGR~~~R~~~~~--~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p 78 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEM--GAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP 78 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHH--TCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred eEEEEC-CcHHHHHHHHHHHhC--CCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh
Confidence 688898 899999999999987 567766542 22333333321 011111 111222344
Q ss_pred HHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 100 GSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 100 ~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
+++.=--.++|+||-|.|.|.. ..-++.-++.|+++|-++.
T Consensus 79 ~~i~W~~~gvD~ViEcTG~f~~---~~~~~~hl~~gakkViisa 119 (169)
T d1dssg1 79 ENIPWSKAGAEYIVESTGVFTT---IEKASAHFKGGAKKVIISA 119 (169)
T ss_dssp GGCCHHHHTCCEEEECSSSCCS---HHHHGGGGTTTCSEEEESS
T ss_pred HHCCccccCCCEEEecCceEcC---HHHHHHHHhcCCceEeecC
Confidence 4332111289999999998865 4555666677999998875
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=94.15 E-value=0.1 Score=45.43 Aligned_cols=121 Identities=20% Similarity=0.140 Sum_probs=67.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-c----------CchhHHHHHHHhCCCcEEEEeeCCChHHHH
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-R----------NREKGAAMVSTLGKNSEFAEVNIYNEGSLL 103 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R----------~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~ 103 (429)
.++++++|.|-| .|.+|+++++.|.+.. |..|+.++ . +...+....+..+........+..+.+
T Consensus 27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~-Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~--- 101 (234)
T d1b26a1 27 IDPKKATVAVQG-FGNVGQFAALLISQEL-GSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNE--- 101 (234)
T ss_dssp CCTTTCEEEEEC-CSHHHHHHHHHHHHHH-CCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHH---
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhc-CCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeeccc---
Confidence 357889999998 7999999999996421 67776554 2 233344444332211111112222333
Q ss_pred HHhc-CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 104 MALR-DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 104 ~~~~-~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
+++. +||+++-||...... -+.+.+..+++|-=.......... ++...++|+.++|+
T Consensus 102 ~~~~~~~DI~~PcA~~~~I~-----~~~a~~l~~~~I~e~AN~p~t~~a---~~~L~~rgI~~~PD 159 (234)
T d1b26a1 102 ELLELDVDILVPAALEGAIH-----AGNAERIKAKAVVEGANGPTTPEA---DEILSRRGILVVPD 159 (234)
T ss_dssp HHHTSCCSEEEECSCTTCBC-----HHHHTTCCCSEEECCSSSCBCHHH---HHHHHHTTCEEECH
T ss_pred cccccccceeecchhccccc-----HHHHHHhhhceEeecCCCCCCHHH---HHHHHHCCeEEech
Confidence 3344 899999998654322 133445566776443333222221 23445678877765
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.09 E-value=0.028 Score=43.56 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=33.4
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
.+.-+-.+++++|+|| |+||-.++..|.+. |.+|+++.++.
T Consensus 15 ~l~l~~~p~~i~IiG~-G~ig~E~A~~l~~~--G~~Vtiv~~~~ 55 (119)
T d3lada2 15 ALDFQNVPGKLGVIGA-GVIGLELGSVWARL--GAEVTVLEAMD 55 (119)
T ss_dssp HTSCSSCCSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred hhCcccCCCeEEEECC-ChHHHHHHHHHHHc--CCceEEEEeec
Confidence 3333456689999995 99999999999997 88999988654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.08 E-value=0.033 Score=43.28 Aligned_cols=35 Identities=20% Similarity=0.417 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.++++|+|| |++|..++..|.++ +.+|+++.++..
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~--g~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTA--GVHVSLVETQPR 64 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CCeEEEECc-chhHHHHHHHhhcc--cceEEEEeeccc
Confidence 589999995 99999999999997 899999987654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=93.98 E-value=0.099 Score=42.82 Aligned_cols=75 Identities=19% Similarity=0.226 Sum_probs=48.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCCh----HHHHHHh--cCccE
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNE----GSLLMAL--RDVDL 111 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~----~~l~~~~--~~~Dv 111 (429)
.+.+|+|+|++| +|...+..+...+ ..+|++.++++++++... +++.. . .+|..+. +.+.+.. .++|+
T Consensus 28 ~g~~VlI~G~Gg-~g~~~~~~~~~~g-~~~Vi~~~~~~~rl~~a~-~~GAd-~--~in~~~~~~~~~~~~~~~~~~G~d~ 101 (175)
T d1cdoa2 28 PGSTCAVFGLGA-VGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAK-VFGAT-D--FVNPNDHSEPISQVLSKMTNGGVDF 101 (175)
T ss_dssp TTCEEEEECCSH-HHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH-HTTCC-E--EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCEEEEEecCC-ccchHHHHHHHHh-hchheeecchHHHHHHHH-HcCCc-E--EEcCCCcchhHHHHHHhhccCCcce
Confidence 346899999755 7887777777753 558899999999876544 45421 2 2233221 2333332 27999
Q ss_pred EEecCCC
Q 014177 112 VVHAAGP 118 (429)
Q Consensus 112 Vi~~agp 118 (429)
+|.++|.
T Consensus 102 vid~~G~ 108 (175)
T d1cdoa2 102 SLECVGN 108 (175)
T ss_dssp EEECSCC
T ss_pred eeeecCC
Confidence 9999874
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.91 E-value=0.038 Score=42.48 Aligned_cols=36 Identities=19% Similarity=0.361 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.+++++|+|| |++|..++..|.+. |.+|+++.|...
T Consensus 21 ~p~~v~IiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGG-GYIGIELGTAYANF--GTKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred cCCeEEEECC-Cccceeeeeeeccc--ccEEEEEEecce
Confidence 4589999995 99999999999997 899999987654
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=93.89 E-value=0.045 Score=44.93 Aligned_cols=80 Identities=21% Similarity=0.260 Sum_probs=55.8
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEE
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLV 112 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvV 112 (429)
+.-++.+|+|+|+|.+..+|+-++..|.++ ++.|+++...... +.+.++++|+|
T Consensus 31 y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t~~------------------------l~~~~~~ADiv 84 (166)
T d1b0aa1 31 YNIDTFGLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFTKN------------------------LRHHVENADLL 84 (166)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSCSC------------------------HHHHHHHCSEE
T ss_pred cCcccccceEEEEeccccccHHHHHHHHHh--hccccccccccch------------------------hHHHHhhhhHh
Confidence 455688999999999999999999999887 7888887643321 34556789999
Q ss_pred EecCCCCCCCchHHHHHHHHHcCCcEEEeCC
Q 014177 113 VHAAGPFQQAPKCTVLEAAIETKTAYIDVCD 143 (429)
Q Consensus 113 i~~agp~~~~~~~~v~~aa~~~gv~~vdis~ 143 (429)
|.++|-...... . -++.|.-.||+..
T Consensus 85 I~a~G~p~~i~~-~----~vk~g~vvIDvGi 110 (166)
T d1b0aa1 85 IVAVGKPGFIPG-D----WIKEGAIVIDVGI 110 (166)
T ss_dssp EECSCCTTCBCT-T----TSCTTCEEEECCC
T ss_pred hhhccCcccccc-c----ccCCCcEEEecCc
Confidence 999874432111 1 1245555666553
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.59 E-value=0.096 Score=43.12 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=57.9
Q ss_pred ccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 32 HFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 32 ~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
++.-++.+|+|+|+|.+..+|+-++..|.++ +..|++++..... +.+.++++|+
T Consensus 32 ~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~t~~------------------------l~~~~~~aDi 85 (170)
T d1a4ia1 32 ETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSKTAH------------------------LDEEVNKGDI 85 (170)
T ss_dssp TTTCCCTTCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTCSS------------------------HHHHHTTCSE
T ss_pred HhCcccccceEEEEecCCccchHHHHHHHhc--cCceEEEeccccc------------------------HHHHHhhccc
Confidence 3455688999999999999999999999987 7888887654332 3345667888
Q ss_pred EEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 112 VVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 112 Vi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
||.++|-..... ...++.|+-.||+..+
T Consensus 86 vi~a~G~~~~i~-----~~~vk~g~iviDvgi~ 113 (170)
T d1a4ia1 86 LVVATGQPEMVK-----GEWIKPGAIVIDCGIN 113 (170)
T ss_dssp EEECCCCTTCBC-----GGGSCTTCEEEECCCB
T ss_pred hhhccccccccc-----cccccCCCeEeccCcc
Confidence 888887543211 1234566666777644
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.52 E-value=0.054 Score=42.04 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=30.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
..++|+|+|| |++|..++..|.+. |.+|+++.+..
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~--g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKA--GKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhcc--ceEEEEEEecC
Confidence 4579999995 99999999999997 89999998754
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=93.48 E-value=0.043 Score=42.14 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=30.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
.+++|+|+|| |++|..++..|.+. |.+|+++.|..
T Consensus 20 ~p~~vvIiGg-G~ig~E~A~~l~~~--G~~Vtlve~~~ 54 (116)
T d1gesa2 20 LPERVAVVGA-GYIGVELGGVINGL--GAKTHLFEMFD 54 (116)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCCEEEEECC-ChhhHHHHHHhhcc--ccEEEEEeecc
Confidence 3579999995 99999999999987 88999998864
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=93.39 E-value=0.37 Score=36.73 Aligned_cols=111 Identities=15% Similarity=0.077 Sum_probs=66.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
++.||+|-|-+|..|+.-++...+. |-+|+. +-++.|.- -+. .++=-.++++++.+ ++|.-+-.
T Consensus 5 k~trVlvQGiTG~~G~~ht~~m~~y--GT~vVa-GVtPgkgG---------~~~--~giPVf~sV~eAv~~~~~~~SvIf 70 (119)
T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQAIAY--GTKMVG-GVTPGKGG---------TTH--LGLPVFNTVREAVAATGATASVIY 70 (119)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH--TCEEEE-EECTTCTT---------EEE--TTEEEESSHHHHHHHHCCCEEEEC
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHh--CCceEE-EEccCCCC---------ccc--CCCchhhHHHHHHHHhCCCeEEEe
Confidence 4568999999999999999999986 666554 44555421 111 11111233445444 67765555
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
..|... ...+-.|+++|++.+-+-.+..-......+...+++++..+
T Consensus 71 VPp~~a---~dA~~EAi~agI~~iV~ITEgIP~~D~~~i~~~~~~~~~~l 117 (119)
T d2nu7a1 71 VPAPFC---KDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRM 117 (119)
T ss_dssp CCGGGH---HHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred ccHHHH---HHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHhhCCCEE
Confidence 555443 23334455899999766655433333444455566666554
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.30 E-value=0.046 Score=45.89 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=31.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
|||+|+|| |++|..++..|.+.+++.+|++..|+.
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999995 999999999999987888999988754
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.25 E-value=0.043 Score=42.06 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
.+++++|+|| |++|..++..|.+. |.+|+++.+..
T Consensus 20 ~p~~vvIiGg-G~~G~E~A~~l~~~--g~~Vtlve~~~ 54 (115)
T d1lvla2 20 LPQHLVVVGG-GYIGLELGIAYRKL--GAQVSVVEARE 54 (115)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHhhc--ccceEEEeeec
Confidence 4579999995 99999999999998 89999998754
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=93.20 E-value=0.049 Score=46.98 Aligned_cols=33 Identities=33% Similarity=0.531 Sum_probs=29.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
++|+|+|| |..|...|..|.++ |++|++++|+.
T Consensus 7 ~kVvVIGa-GiaGl~~A~~L~~~--G~~V~vier~~ 39 (268)
T d1c0pa1 7 KRVVVLGS-GVIGLSSALILARK--GYSVHILARDL 39 (268)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CcEEEECc-cHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 68999995 99999999999998 78999999864
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.20 E-value=0.047 Score=42.08 Aligned_cols=34 Identities=12% Similarity=0.294 Sum_probs=30.2
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
+++|+|+|| |++|..++..|.+. |.+|+++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRL--GIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTT--TCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhc--cccceeeehhc
Confidence 589999995 99999999999987 89999998754
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.17 E-value=0.067 Score=41.46 Aligned_cols=36 Identities=22% Similarity=0.366 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.+++++|+|| |++|..++..|.+. |.+|+++.++..
T Consensus 22 ~p~~~vIiG~-G~ig~E~A~~l~~l--G~~Vtii~~~~~ 57 (122)
T d1v59a2 22 IPKRLTIIGG-GIIGLEMGSVYSRL--GSKVTVVEFQPQ 57 (122)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CCCeEEEECC-CchHHHHHHHHHhh--CcceeEEEeccc
Confidence 4589999995 99999999999997 899999987653
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=93.15 E-value=0.42 Score=39.16 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=60.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcC-CCceEEEEecCchhHHHHHHHhC-----C----Cc-------------EEEEeeC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLC-PDLQIVVGSRNREKGAAMVSTLG-----K----NS-------------EFAEVNI 96 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v~~R~~~~~~~l~~~l~-----~----~v-------------~~~~~Dl 96 (429)
+||.|-| -|.||+.+.|.+.++. +..+|+... ++...+.++..+. + .+ .+....-
T Consensus 1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaIN-d~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~ 78 (172)
T d1rm4a1 1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVIN-DTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD 78 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEE-CTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEc-CCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecC
Confidence 4789998 8999999999988752 235666543 2233444332211 0 01 1111222
Q ss_pred CChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCC
Q 014177 97 YNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDD 144 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~ 144 (429)
.|++.+.=.-.++|+||-|.|.|.. ..-++.-++.|+++|-++..
T Consensus 79 ~~p~~i~W~~~gvDiViEcTG~f~~---~~~~~~hl~~GakkViiSAP 123 (172)
T d1rm4a1 79 RNPVNLPWGDMGIDLVIEGTGVFVD---RDGAGKHLQAGAKKVLITAP 123 (172)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCB---HHHHHHHHHTTCSCEEESSC
T ss_pred CChHHCChhhcCCCEEEecCceEcc---HHHHHHHHhcCCceEEeecc
Confidence 3444321111279999999999875 45567778889999888753
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.07 E-value=0.091 Score=43.23 Aligned_cols=96 Identities=7% Similarity=-0.048 Sum_probs=52.8
Q ss_pred CeEEEEcCC-hHHHHHHHHHHhHcCC--CceEEEEecCchh--HHHHHHH----h-CCCcEEEEeeCCChHHHHHHhcCc
Q 014177 40 ARVLVLGGT-GRVGGSTAVALSKLCP--DLQIVVGSRNREK--GAAMVST----L-GKNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 40 ~~VlV~Ga~-G~iG~~l~~~L~~~~~--g~~v~v~~R~~~~--~~~l~~~----l-~~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
+||.|+||+ .+.+..++..+..... ..++++.|.++++ ++.+... . ..+........+|. .+.++++
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~---~~al~ga 78 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDR---RRALDGA 78 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCH---HHHHTTC
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCc---hhhcCCC
Confidence 689999963 2344555555554311 2489999988754 3333211 0 01233333344453 4568899
Q ss_pred cEEEecCCCCCCCchHHHHHHHHHcCCcE
Q 014177 110 DLVVHAAGPFQQAPKCTVLEAAIETKTAY 138 (429)
Q Consensus 110 DvVi~~agp~~~~~~~~v~~aa~~~gv~~ 138 (429)
|+||++++.....+..+.-....++|+-+
T Consensus 79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~ 107 (169)
T d1s6ya1 79 DFVTTQFRVGGLEARAKDERIPLKYGVIG 107 (169)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCC
T ss_pred CEEEEccccCCCCCeehhhhhhhhcCcee
Confidence 99999998654322223333345566533
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=93.06 E-value=0.16 Score=44.14 Aligned_cols=117 Identities=15% Similarity=0.098 Sum_probs=64.6
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEE-ec----------CchhHHHHHHHhCC-----CcEEEEeeCCC
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG-SR----------NREKGAAMVSTLGK-----NSEFAEVNIYN 98 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~-~R----------~~~~~~~l~~~l~~-----~v~~~~~Dl~d 98 (429)
+++++++|+|-| .|.+|+++++.|.+.. +..|+.. |. +.+.+.+....... ..+.+ +
T Consensus 28 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~~-G~kvv~vsD~~g~i~~~~G~d~~~l~~~~~~~~~~~~~~~~~~~-----~ 100 (239)
T d1gtma1 28 DTLKGKTIAIQG-YGNAGYYLAKIMSEDF-GMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNI-----T 100 (239)
T ss_dssp SCSTTCEEEEEC-CSHHHHHHHHHHHHTT-CCEEEEEECSSCEEEEEEEECHHHHHHHHHHHSSSTTCTTSEEE-----C
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhc-CcceeeccccccceecCCcCCHHHHHHHHHhccccccCCCCeee-----c
Confidence 457889999999 6999999999997632 6666544 32 22333333333221 12222 2
Q ss_pred hHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
.+++ +-.+||+++-||....... +.+.+.++++|--......... -++...++|+.++|+
T Consensus 101 ~~~i--~~~~~DIl~PcA~~~~I~~-----~~a~~i~ak~I~e~AN~p~t~e---a~~~L~~rgI~~iPD 160 (239)
T d1gtma1 101 NEEL--LELEVDVLAPAAIEEVITK-----KNADNIKAKIVAEVANGPVTPE---ADEILFEKGILQIPD 160 (239)
T ss_dssp HHHH--HHSCCSEEEECSCSCCBCT-----TGGGGCCCSEEECCSSSCBCHH---HHHHHHHTTCEEECH
T ss_pred cccc--ccccccEEeeccccccccH-----HHHHhccccEEEecCCCCCCHH---HHHHHHHCCCEEecc
Confidence 2333 2238999999996543221 2233456676643333322221 133445677777665
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=93.03 E-value=0.17 Score=46.45 Aligned_cols=96 Identities=18% Similarity=0.220 Sum_probs=66.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCC--CcEEEEeeCCChHHHHHHhcCccEEEecCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGK--NSEFAEVNIYNEGSLLMALRDVDLVVHAAG 117 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~--~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ag 117 (429)
+++.|+| +|..+..-++.+....+--+|.+.+|++++.+++.+++.. .+++..+ ++++++++++|+|+-|..
T Consensus 129 ~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~-----~s~~eav~~ADIi~t~Ta 202 (340)
T d1x7da_ 129 RKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRA-----SSVAEAVKGVDIITTVTA 202 (340)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEEC-----SSHHHHHTTCSEEEECCC
T ss_pred ceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceec-----CCHHHHHhcCCceeeccc
Confidence 6899999 6889998888887755556899999999999998887753 3454444 246788999999997764
Q ss_pred CCCCCchHHHHH-HHHHcCCcEEEeCCC
Q 014177 118 PFQQAPKCTVLE-AAIETKTAYIDVCDD 144 (429)
Q Consensus 118 p~~~~~~~~v~~-aa~~~gv~~vdis~~ 144 (429)
.... .++++ ..++.|+|..-++++
T Consensus 203 s~s~---~Pv~~~~~l~pG~hI~aiGs~ 227 (340)
T d1x7da_ 203 DKAY---ATIITPDMLEPGMHLNAVGGD 227 (340)
T ss_dssp CSSE---EEEECGGGCCTTCEEEECSCC
T ss_pred cCCC---CcccchhhcCCCCEEeecccc
Confidence 2211 12222 235566666655543
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.97 E-value=0.1 Score=42.63 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=46.1
Q ss_pred CeEEEEcCChHHHHHHH-HHHhHc---CCCceEEEEecCchhHHHHHHHh----CCCcEEEEeeCCChHHHHHHhcCccE
Q 014177 40 ARVLVLGGTGRVGGSTA-VALSKL---CPDLQIVVGSRNREKGAAMVSTL----GKNSEFAEVNIYNEGSLLMALRDVDL 111 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~-~~L~~~---~~g~~v~v~~R~~~~~~~l~~~l----~~~v~~~~~Dl~d~~~l~~~~~~~Dv 111 (429)
|||.|+|| |.+|...+ ..|++. .+..++++.|.++++++...+.. ....... .. ++ ..+.++++|+
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~-~t-~~---~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL-IS-DT---FEGAVVDAKY 74 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE-EC-SS---HHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE-Ee-cC---cccccCCCCE
Confidence 58999997 54665544 333322 12358999999999877543321 1222222 22 22 3467889999
Q ss_pred EEecCCCCC
Q 014177 112 VVHAAGPFQ 120 (429)
Q Consensus 112 Vi~~agp~~ 120 (429)
||.+++...
T Consensus 75 VVita~~~~ 83 (162)
T d1up7a1 75 VIFQFRPGG 83 (162)
T ss_dssp EEECCCTTH
T ss_pred EEEecccCC
Confidence 999998654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.83 E-value=0.071 Score=41.33 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=29.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
.+++++|+|| |+||..++..|.+. |.+|+++.|+
T Consensus 19 ~P~~vvIIGg-G~iG~E~A~~l~~l--G~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGA-SYVALECAGFLAGI--GLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CCCeEEEECC-CccHHHHHHHHhhc--CCeEEEEEec
Confidence 4578999995 99999999999997 7889988875
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.74 E-value=0.059 Score=41.73 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.++++|+|| |++|-.++..|.+. |.+|+++.|++.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~--g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEA--GYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHT--TCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcc--cceEEEEecccc
Confidence 378999995 99999999999997 899999987643
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.67 E-value=0.066 Score=41.64 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=30.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
+++++|+|| |++|..++..|.+. |.+|+++.|+.
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~--G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSAL--GSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcC--CcEEEEEeecc
Confidence 589999995 99999999999997 88999998864
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=92.59 E-value=0.44 Score=36.40 Aligned_cols=111 Identities=21% Similarity=0.159 Sum_probs=66.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
++.||+|-|-+|..|+.-++...+. |-+|+. +-++.|.- -++.-+-+ .++++++.+ ++|+-+-.
T Consensus 6 k~trVivQGiTG~~G~~ht~~m~~y--GT~iVa-GVtPgkgG---------~~~~giPV--f~tV~eAv~~~~~d~SvIf 71 (121)
T d1oi7a1 6 RETRVLVQGITGREGQFHTKQMLTY--GTKIVA-GVTPGKGG---------MEVLGVPV--YDTVKEAVAHHEVDASIIF 71 (121)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH--TCEEEE-EECTTCTT---------CEETTEEE--ESSHHHHHHHSCCSEEEEC
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHh--CCceEe-eeecCCCC---------cEEECCch--HhhHHHHHHhcCCeEEEEe
Confidence 3468999999999999999999996 666655 44555421 11111111 223444443 78877767
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcE
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPA 165 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~ 165 (429)
..|... ...+-.|+++|++.+-+-.+..-......+...+++++..+
T Consensus 72 VPp~~a---~dAi~EAi~agI~liv~ITEgVPv~Dm~~i~~~~~~~~~~l 118 (121)
T d1oi7a1 72 VPAPAA---ADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRL 118 (121)
T ss_dssp CCHHHH---HHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEE
T ss_pred eCHHHH---HHHHHHHHhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCEE
Confidence 766443 33344456889999766655433333344445556666544
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.32 E-value=0.081 Score=41.63 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
..++|+|+| +|++|..++..|.+. +.+|++..+...
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~--g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKA--NMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhh--Ccceeeeeeccc
Confidence 358999999 499999999999997 899999987543
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.20 E-value=0.1 Score=42.96 Aligned_cols=68 Identities=19% Similarity=0.294 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a 116 (429)
+++|+|.|+| +|-.|.+=+..|.++ |++|++.-|.-.+-.+.++. +.++. -++.++.+..|+|..+.
T Consensus 14 ik~k~IaViG-YGsQG~AhAlNLrDS--G~~V~VGLr~gs~s~~~A~~--~Gf~v--------~~~~eA~~~aDiim~L~ 80 (182)
T d1np3a2 14 IQGKKVAIIG-YGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEA--HGLKV--------ADVKTAVAAADVVMILT 80 (182)
T ss_dssp HHTSCEEEEC-CSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHH--TTCEE--------ECHHHHHHTCSEEEECS
T ss_pred HCCCEEEEEe-eCcHhHHHHhhhhhc--CCCEEEEcCCCCccHHHHhh--hcccc--------ccHHHHhhhcCeeeeec
Confidence 5689999999 999999999999997 88999987765443333332 23433 23667888999999886
Q ss_pred C
Q 014177 117 G 117 (429)
Q Consensus 117 g 117 (429)
.
T Consensus 81 P 81 (182)
T d1np3a2 81 P 81 (182)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.12 E-value=0.33 Score=42.21 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=29.7
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe
Q 014177 36 KNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS 72 (429)
Q Consensus 36 ~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~ 72 (429)
++.+++|+|-| .|.+|+++++.|.+. |.+|+.++
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~--Gakvv~vs 61 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKM--GAKVIAVS 61 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHc--CCeEEEee
Confidence 57889999999 799999999999997 78887554
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=92.00 E-value=0.57 Score=40.92 Aligned_cols=122 Identities=13% Similarity=0.050 Sum_probs=68.4
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe-c----------CchhHHHHHHHh----CCCc-------EEE
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS-R----------NREKGAAMVSTL----GKNS-------EFA 92 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~-R----------~~~~~~~l~~~l----~~~v-------~~~ 92 (429)
.++++++|+|-| .|.+|+++++.|.+. |.+|+.+. . +.+.+.+...+. ...+ ...
T Consensus 32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~--GakvvavsD~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (255)
T d1bgva1 32 DTLVGKTVALAG-FGNVAWGAAKKLAEL--GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQ 108 (255)
T ss_dssp CCSTTCEEEECC-SSHHHHHHHHHHHHH--TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHc--CCeEEEEecCCceEecCCCCCHHHHHHHHHHHhhhcCcchhhhhhhcCce
Confidence 357889999999 799999999999998 78877543 2 223322222111 0000 011
Q ss_pred EeeCCChHHHHHHhcCccEEEecCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 93 EVNIYNEGSLLMALRDVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 93 ~~Dl~d~~~l~~~~~~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
..+-.+ + +-.+||+++-||...... ..-++.....+|++|-=.......... .....+++|+.++|+
T Consensus 109 ~~~~~~---~--~~~~~DiliPcA~~~~I~--~~~a~~l~a~~ck~I~EgAN~p~t~ea--~~~ll~~~gI~vvPD 175 (255)
T d1bgva1 109 FFPGEK---P--WGQKVDIIMPCATQNDVD--LEQAKKIVANNVKYYIEVANMPTTNEA--LRFLMQQPNMVVAPS 175 (255)
T ss_dssp EEETCC---G--GGSCCSEEECCSCTTCBC--HHHHHHHHHTTCCEEECCSSSCBCHHH--HHHHHHCTTCEEECH
T ss_pred eechhh---c--ccccccEEeecccccccc--HHHHHhhhhcCceEEecCCCCCcchHH--HHHHHHhcCCEEehH
Confidence 122111 1 123899999998654432 345566667788887544333222221 111234467777765
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=91.89 E-value=0.082 Score=41.16 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
-.+++++|+|| |+||..++..|.+. |.+|+++.+..
T Consensus 24 ~~p~~vvIiGg-G~IG~E~A~~~~~~--G~~Vtive~~~ 59 (125)
T d1ojta2 24 EVPGKLLIIGG-GIIGLEMGTVYSTL--GSRLDVVEMMD 59 (125)
T ss_dssp CCCSEEEEESC-SHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred ccCCeEEEECC-CHHHHHHHHHhhcC--CCEEEEEEeec
Confidence 34589999995 99999999999998 89999998754
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.78 E-value=0.062 Score=41.69 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=31.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.+++++|+|| |++|-.++..|.+. |.+|+++.|+..
T Consensus 24 ~p~~~viiG~-G~iglE~A~~~~~~--G~~Vtvi~~~~~ 59 (123)
T d1dxla2 24 IPKKLVVIGA-GYIGLEMGSVWGRI--GSEVTVVEFASE 59 (123)
T ss_dssp CCSEEEESCC-SHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred cCCeEEEEcc-chHHHHHHHHHHhc--CCeEEEEEEccc
Confidence 4589999995 99999999999998 899999988654
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=91.74 E-value=0.094 Score=43.95 Aligned_cols=40 Identities=28% Similarity=0.299 Sum_probs=33.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHH
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVS 83 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~ 83 (429)
|+|.|+| .|++|..++..|+ . |++|+..|-++++.+.+.+
T Consensus 1 MkI~ViG-lG~vGl~~a~~~a-~--g~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLLS-L--QNEVTIVDILPSKVDKINN 40 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHHT-T--TSEEEEECSCHHHHHHHHT
T ss_pred CEEEEEC-CChhHHHHHHHHH-C--CCcEEEEECCHHHHHHHhh
Confidence 6899998 7999999987664 4 7899999999988877764
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.59 E-value=0.21 Score=45.33 Aligned_cols=92 Identities=14% Similarity=0.056 Sum_probs=61.7
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCC-cEEEEeeCCChHHHHHHhcCccEEEecCCC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKN-SEFAEVNIYNEGSLLMALRDVDLVVHAAGP 118 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~-v~~~~~Dl~d~~~l~~~~~~~DvVi~~agp 118 (429)
+++.|+| +|..++.-++.|....+-.+|.+.+|+.++.+.+.+++... +.. ..+ . .+.+.++|+|+.|..-
T Consensus 126 ~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~-~~~--~----~~a~~~aDiV~taT~s 197 (320)
T d1omoa_ 126 SVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISA-SVQ--P----AEEASRCDVLVTTTPS 197 (320)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCE-EEC--C----HHHHTSSSEEEECCCC
T ss_pred cEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcc-ccc--h----hhhhccccEEEEeccC
Confidence 6799998 69999999999987655568999999999998888766422 222 222 2 2446789999977532
Q ss_pred CCCCchHHHHH-HHHHcCCcEEEeCCC
Q 014177 119 FQQAPKCTVLE-AAIETKTAYIDVCDD 144 (429)
Q Consensus 119 ~~~~~~~~v~~-aa~~~gv~~vdis~~ 144 (429)
. .++++ ..++.|.|..-++++
T Consensus 198 ~-----~P~~~~~~l~~G~hv~~iGs~ 219 (320)
T d1omoa_ 198 R-----KPVVKAEWVEEGTHINAIGAD 219 (320)
T ss_dssp S-----SCCBCGGGCCTTCEEEECSCC
T ss_pred c-----ccccchhhcCCCCeEeecCCc
Confidence 1 12332 235667766655543
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=91.55 E-value=0.097 Score=41.41 Aligned_cols=108 Identities=16% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCCeEEEEcCC---hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLGGT---GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~Ga~---G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
..++|.|+|++ +..|..+++.|.+. |+++..+.-++.. + .+.-..+ ..++.++-..+|+|+-
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~--g~~~~~v~~~~~~-~--------~i~g~~~----~~~l~~i~~~iD~v~v 76 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQ--GYRVLPVNPRFQG-E--------ELFGEEA----VASLLDLKEPVDILDV 76 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHT--TCEEEEECGGGTT-S--------EETTEEC----BSSGGGCCSCCSEEEE
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcC--CCCceEEEecccc-c--------eeeceec----ccchhhccCCCceEEE
Confidence 46899999987 56899999999997 7888887543321 0 0110111 1223334457899998
Q ss_pred cCCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEe
Q 014177 115 AAGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAIT 167 (429)
Q Consensus 115 ~agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~ 167 (429)
+..+... ..+++.|.+.|++.+-+..... ..++.+.++++|+.++-
T Consensus 77 ~~p~~~v---~~~v~~~~~~g~k~i~~q~G~~----~~e~~~~a~~~Gi~vV~ 122 (136)
T d1iuka_ 77 FRPPSAL---MDHLPEVLALRPGLVWLQSGIR----HPEFEKALKEAGIPVVA 122 (136)
T ss_dssp CSCHHHH---TTTHHHHHHHCCSCEEECTTCC----CHHHHHHHHHTTCCEEE
T ss_pred eccHHHH---HHHHHHHHhhCCCeEEEecCcc----CHHHHHHHHHcCCEEEc
Confidence 8865433 5678999999999876653321 12345678889988764
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.51 E-value=0.12 Score=44.46 Aligned_cols=41 Identities=20% Similarity=0.380 Sum_probs=34.4
Q ss_pred cCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 33 FQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 33 ~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
....-..++|+|+|| |..|...+..|.++ |++|++..++..
T Consensus 43 ~~~~~~~k~VvIIGa-GpAGl~aA~~l~~~--G~~v~l~E~~~~ 83 (233)
T d1djqa3 43 FRQTKNKDSVLIVGA-GPSGSEAARVLMES--GYTVHLTDTAEK 83 (233)
T ss_dssp CCCCSSCCEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred cCcccCCceEEEEcc-cHHHHHHHHHHHHh--ccceeeEeeccc
Confidence 344456799999995 99999999999998 899999987654
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=91.29 E-value=0.15 Score=38.98 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
..++|+|+| +|++|..++..|.+. +.+++++.|++.
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~--g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNAT--GRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHT--TCEEEEECSSCT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhc--chhheEeeccch
Confidence 358999999 599999999999987 789999987643
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=91.18 E-value=0.12 Score=36.72 Aligned_cols=52 Identities=21% Similarity=0.186 Sum_probs=37.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCC
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYN 98 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d 98 (429)
+|+|.|+| +|..|+-++..-.+. |+++.+.+-+.+..... ...+.+.++.++
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~L--G~~v~vldp~~~~pa~~-----~a~dvIT~e~E~ 52 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPL--GIAVWPVGLDAEPAAVP-----FQQSVITAEIER 52 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGG--TEEEEEECTTSCGGGSC-----GGGSEEEESSSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHc--CCEEEEEcCCCCCcccc-----cccceEEEeecc
Confidence 57999999 599999999999887 89999998765432111 123456666664
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=91.17 E-value=0.083 Score=46.30 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=29.0
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
.|+|+|| |.+|..++..|+++ |.+|++.+++.
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~--G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKE--NKNTALFESGT 37 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 5999995 99999999999998 78999999864
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.15 E-value=0.088 Score=43.52 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~ 76 (429)
.++||+|+|| |..|...|..|.++ |+ +|++..|+..
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~--G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARL--GYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHT--TCCCEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHC--CCCeEEEEEecCc
Confidence 3589999995 99999999999997 77 5999887654
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=91.08 E-value=0.19 Score=38.59 Aligned_cols=92 Identities=16% Similarity=0.119 Sum_probs=60.0
Q ss_pred CCeEEEEcCCh----------HHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc-
Q 014177 39 NARVLVLGGTG----------RVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR- 107 (429)
Q Consensus 39 ~~~VlV~Ga~G----------~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~- 107 (429)
.++|||+|+.. +.+.+.++.|.+. |++++++..|++....- . +-.+-+.+.=-..+.+.+.++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVstd---~-d~aD~lYfeplt~e~v~~Ii~~ 77 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVSTD---Y-DTSDRLYFEPVTLEDVLEIVRI 77 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSSTTS---T-TSSSEEECCCCSHHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhhcC---h-hhcCceEEccCCHHHHHHHHHH
Confidence 47999999633 7899999999997 89999999998864311 1 122334444445566666655
Q ss_pred -CccEEEecCCCCCCCchHHHHHHHHHcCCcEE
Q 014177 108 -DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYI 139 (429)
Q Consensus 108 -~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~v 139 (429)
++|.|+-..|--. ..++.....+.|++.+
T Consensus 78 E~p~~ii~~~GGQt---alnla~~L~~~gv~iL 107 (121)
T d1a9xa4 78 EKPKGVIVQYGGQT---PLKLARALEAAGVPVI 107 (121)
T ss_dssp HCCSEEECSSSTHH---HHTTHHHHHHTTCCBC
T ss_pred hCCCEEEeehhhhh---HHHHHHHHHHcCCcEE
Confidence 7888876554211 1455555566776654
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=90.90 E-value=0.25 Score=40.39 Aligned_cols=72 Identities=17% Similarity=0.077 Sum_probs=49.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC----------------CCcEEEEeeCCChHH
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG----------------KNSEFAEVNIYNEGS 101 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~----------------~~v~~~~~Dl~d~~~ 101 (429)
.+++||.+| || .|+. +..|+++ |++|+.+|.++..++...+... ....+.+.|..+...
T Consensus 20 ~~~rvLd~G-CG-~G~~-a~~la~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 94 (201)
T d1pjza_ 20 PGARVLVPL-CG-KSQD-MSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 94 (201)
T ss_dssp TTCEEEETT-TC-CSHH-HHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred CCCEEEEec-Cc-CCHH-HHHHHHc--CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence 457999999 46 6764 4577777 8999999999887777665542 234677778776543
Q ss_pred HHHHhcCccEEEecC
Q 014177 102 LLMALRDVDLVVHAA 116 (429)
Q Consensus 102 l~~~~~~~DvVi~~a 116 (429)
. .....|+|+...
T Consensus 95 ~--~~~~~D~i~~~~ 107 (201)
T d1pjza_ 95 R--DIGHCAAFYDRA 107 (201)
T ss_dssp H--HHHSEEEEEEES
T ss_pred c--cccceeEEEEEe
Confidence 2 223578777543
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=90.86 E-value=0.17 Score=42.00 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
...|+|+|+|| |..|...+..|.++ |++|++.+++..
T Consensus 41 ~~~k~V~IIGa-GPAGL~AA~~la~~--G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVGA-GPAGLAFAINAAAR--GHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHTT--TCEEEEEESSSS
T ss_pred CCCcEEEEECc-cHHHHHHHHHHHhh--ccceEEEeccCc
Confidence 45689999995 99999999999998 899999998653
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=90.84 E-value=0.12 Score=46.99 Aligned_cols=36 Identities=17% Similarity=0.358 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
++|+|+|+| +|..|..+|..|.+. |++|++..++..
T Consensus 1 k~KKI~IIG-aG~sGL~aA~~L~k~--G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVG-AGFSGAVIGRQLAEK--GHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHTT--TCEEEEEESSSS
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHhC--CCCEEEEECCCC
Confidence 468999999 599999999999986 899999987654
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=90.82 E-value=0.12 Score=44.71 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=31.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.+||+|+|| |..|..++..|.++ |++|++.+|+++
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~--G~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDA--GVDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 378999995 99999999999997 899999998654
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=90.82 E-value=0.71 Score=38.50 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=63.9
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHHHHHHhCCCcEEEEeeC--------------------CC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNI--------------------YN 98 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl--------------------~d 98 (429)
+||.|+|- |.-|..++..|.+.+. +.+.+.++-+.+.++... .. .-+++.- .+
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~----a~-~ki~iG~~~t~G~G~g~~p~~g~~aa~e~ 74 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASN----AD-VKIQIGENITRGLGAGGRPEIGEQAALES 74 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCC----CS-EEEECCTTTTTTSCCTTCHHHHHHHHHHT
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCC----cc-eEEecccccCCCcccccCchhhHhHHHHH
Confidence 47899994 7799999999988643 457777776665544221 11 1222221 24
Q ss_pred hHHHHHHhcCccEEEecCCCCCCCc---hHHHHHHHHHcCCcEEEe
Q 014177 99 EGSLLMALRDVDLVVHAAGPFQQAP---KCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 99 ~~~l~~~~~~~DvVi~~agp~~~~~---~~~v~~aa~~~gv~~vdi 141 (429)
.+.+.+.++++|+||-+||.-..+| ..-+.+.|.+.++..+-+
T Consensus 75 ~~~I~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~lvv~i 120 (194)
T d1w5fa1 75 EEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAI 120 (194)
T ss_dssp HHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCceEEE
Confidence 5678888899999999998655433 245678888888766533
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.74 E-value=0.21 Score=40.83 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=51.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe--cCchh-----------HHHHHHHhCCCcEEEEeeCCChHHHHH
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS--RNREK-----------GAAMVSTLGKNSEFAEVNIYNEGSLLM 104 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~--R~~~~-----------~~~l~~~l~~~v~~~~~Dl~d~~~l~~ 104 (429)
++.+|.|+| +|.||+.+++.|.++..+.++.+.+ .+... .....+.+. ....+..+.+.+.+
T Consensus 3 k~i~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 77 (168)
T d1ebfa1 3 KVVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALA----ASTTKTLPLDDLIA 77 (168)
T ss_dssp SEEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHH----TCCCBCCCHHHHHH
T ss_pred CEEEEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhh----hcccccccHHHHHH
Confidence 446899998 7999999999998764444443322 11100 000111110 01112223344444
Q ss_pred Hhc---CccEEEecCCCCCCCchHHHHHHHHHcCCcEEEe
Q 014177 105 ALR---DVDLVVHAAGPFQQAPKCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 105 ~~~---~~DvVi~~agp~~~~~~~~v~~aa~~~gv~~vdi 141 (429)
.+. ..++++.|.+-.. ....+..+++.|+|.|-.
T Consensus 78 ~~~~~~~~~vivd~t~~~~---~~~~~~~aL~~G~hVVTA 114 (168)
T d1ebfa1 78 HLKTSPKPVILVDNTSSAY---IAGFYTKFVENGISIATP 114 (168)
T ss_dssp HHTTCSSCEEEEECSCCHH---HHTTHHHHHHTTCEEECC
T ss_pred HhccCCCceEEEEecCChH---HHHHHHHHHHcCCeEEec
Confidence 433 4678888765321 134456788999888843
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=90.59 E-value=0.11 Score=45.21 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=30.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
.|||+|+|| |.-|...+..|.+. |++|++..++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~--G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIH--GLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTT--SCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 389999995 99999999999987 89999998754
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.19 E-value=0.35 Score=37.49 Aligned_cols=75 Identities=13% Similarity=0.131 Sum_probs=53.5
Q ss_pred CCCCeEEEEcCC----------hHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHh
Q 014177 37 NRNARVLVLGGT----------GRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMAL 106 (429)
Q Consensus 37 ~~~~~VlV~Ga~----------G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~ 106 (429)
...++|||+|+. -+.+.++++.|.+. |+++++++.|++....-. +-.+-+.+.=-..+.+.+.+
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TVstd~----d~aD~lYfePlt~e~v~~Ii 78 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATIMTDP----EMADATYIEPIHWEVVRKII 78 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGCG----GGSSEEECSCCCHHHHHHHH
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhhhcCh----hhcceeeeecCCHHHHHHHH
Confidence 345899999973 37899999999998 899999999988653211 11233444445567777777
Q ss_pred c--CccEEEecCC
Q 014177 107 R--DVDLVVHAAG 117 (429)
Q Consensus 107 ~--~~DvVi~~ag 117 (429)
+ ++|.|+-..|
T Consensus 79 ~~E~pd~il~~~G 91 (127)
T d1a9xa3 79 EKERPDAVLPTMG 91 (127)
T ss_dssp HHHCCSEEECSSS
T ss_pred HHhCcCCeEEEee
Confidence 6 8999886654
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.16 E-value=0.91 Score=34.97 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=64.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhc--CccEEEec
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALR--DVDLVVHA 115 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~--~~DvVi~~ 115 (429)
++.||+|-|-+|..|+.-++...+. |-+|+. +-++.|.- -++.-+-+ .++++++.+ ++|.-+-.
T Consensus 14 k~TrVivQGiTG~~G~~ht~~m~~Y--GT~iVa-GVtPgKgG---------~~~~giPV--f~tV~eA~~~~~~daSvIf 79 (130)
T d1euca1 14 KNTKVICQGFTGKQGTFHSQQALEY--GTNLVG-GTTPGKGG---------KTHLGLPV--FNTVKEAKEQTGATASVIY 79 (130)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH--TCEEEE-EECTTCTT---------CEETTEEE--ESSHHHHHHHHCCCEEEEC
T ss_pred CCCeEEEEcCCCcHHHHHHHHHHHh--cCCeEE-eeccCCCC---------ccccCccc--hhhHHHHHHhcCCcEEEEe
Confidence 4578999999999999999999996 666655 44555421 11111111 233444444 67876666
Q ss_pred CCCCCCCchHHHHHHHHHcCCcEEEeCCChhHHHHHHhhHHHHHHcCCcEEec
Q 014177 116 AGPFQQAPKCTVLEAAIETKTAYIDVCDDTIYSQRAKSFKDRAIAANIPAITT 168 (429)
Q Consensus 116 agp~~~~~~~~v~~aa~~~gv~~vdis~~~~~~~~~~~~~~~a~~~g~~~i~~ 168 (429)
..|... ...+-.|+++|++.+-+-.+..-......+...+.+.+...++|
T Consensus 80 VPp~~a---~dAi~EAi~agI~liV~ITEgIPv~Dm~~i~~~~~~~~~~~liG 129 (130)
T d1euca1 80 VPPPFA---AAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIG 129 (130)
T ss_dssp CCHHHH---HHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred cCHHHH---HHHHHHHHhCCCCEEEEecCCCCHHHHHHHHHHHHhCCCcEEeC
Confidence 665433 33344456789999766555433333333333333333333443
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=89.45 E-value=0.21 Score=44.25 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
-..++|+|+| +|..|...+..|.++ |++|++..++.
T Consensus 28 ~~pkkV~IIG-aG~aGLsaA~~L~~~--G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVG-AGMAGLSAAYVLAGA--GHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEEC-CBHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 3558999999 599999999999998 89999998754
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=89.34 E-value=0.51 Score=39.92 Aligned_cols=96 Identities=16% Similarity=0.125 Sum_probs=63.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHHHHHHhCCCcEEEEeeC--------------------C
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAAMVSTLGKNSEFAEVNI--------------------Y 97 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl--------------------~ 97 (429)
..+|.|+|- |.-|..++..|.+.+. +.+.++++-+.+.+.... .. .-++... .
T Consensus 15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~----~~-~ki~ig~~~t~g~Gag~~p~~g~~aa~e 88 (209)
T d2vapa1 15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTK----AD-KKILIGKKLTRGLGAGGNPKIGEEAAKE 88 (209)
T ss_dssp CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSC----CS-EEEECCTTTTTTBCCTTCHHHHHHHHHH
T ss_pred CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCC----cc-hhcccccccccccccccchHHHHHHHHH
Confidence 368999994 7799999999988743 467777777665554321 11 1122211 2
Q ss_pred ChHHHHHHhcCccEEEecCCCCCCCc---hHHHHHHHHHcCCcEEE
Q 014177 98 NEGSLLMALRDVDLVVHAAGPFQQAP---KCTVLEAAIETKTAYID 140 (429)
Q Consensus 98 d~~~l~~~~~~~DvVi~~agp~~~~~---~~~v~~aa~~~gv~~vd 140 (429)
+.+.+.+.++++|+||-+||.-..+| ..-+.+.|.+.|+..+-
T Consensus 89 ~~~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~ 134 (209)
T d2vapa1 89 SAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVA 134 (209)
T ss_dssp THHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEE
Confidence 34578888899999999998665433 24567778888876553
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.71 E-value=0.16 Score=44.79 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=30.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.+|+|+|| |-.|..++..|.++ |++|++.+++++
T Consensus 3 ~~V~IvGa-Gp~Gl~~A~~L~~~--G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIGA-GPSGLLLGQLLHKA--GIDNVILERQTP 36 (292)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred CCEEEECc-CHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 47999995 99999999999998 899999998764
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=88.46 E-value=0.23 Score=45.04 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=31.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.+|+|+|+|| |..|..++..|++.+.+.+|++..|+..
T Consensus 3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 3589999995 9999999999987644579999988754
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=87.62 E-value=0.2 Score=43.44 Aligned_cols=33 Identities=27% Similarity=0.284 Sum_probs=29.3
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
|+|+|+|| |..|...+..|.++ |++|++..++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~--G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSR--GTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTT--TCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 57999995 99999999999997 89999998754
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.61 E-value=0.2 Score=44.78 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
|..|+|+| +|..|..+|+.|++. |.+|++..++..
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~--g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKL--NKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGG--TCCEEEECSSSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhC--CCcEEEEECCCC
Confidence 56899999 599999999999987 789999887643
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=87.41 E-value=1.5 Score=36.59 Aligned_cols=95 Identities=15% Similarity=0.058 Sum_probs=63.9
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCchhHHHHHHHhCCCcEEEEee--------------------CCCh
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNREKGAAMVSTLGKNSEFAEVN--------------------IYNE 99 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~D--------------------l~d~ 99 (429)
+|-|+|- |..|..++..|.+++. +.+++.++-+...+.... ....+... ..+.
T Consensus 3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~~-----~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~ 76 (198)
T d1rq2a1 3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSD-----ADVKLDVGRDSTRGLGAGADPEVGRKAAEDAK 76 (198)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCC-----CSEEEECCTTTC-----CCCHHHHHHHHHHTH
T ss_pred eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHHHhcCC-----cchhhccccccccCCCcCcChhhhHhhHHHHH
Confidence 4678884 6689999999988643 467777776655544321 11222222 1356
Q ss_pred HHHHHHhcCccEEEecCCCCCCCc---hHHHHHHHHHcCCcEEEe
Q 014177 100 GSLLMALRDVDLVVHAAGPFQQAP---KCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 100 ~~l~~~~~~~DvVi~~agp~~~~~---~~~v~~aa~~~gv~~vdi 141 (429)
+.+.+.++++|+||-+||.-..+| ..-+++.|.+.|+..+-+
T Consensus 77 ~~I~~~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g~l~v~i 121 (198)
T d1rq2a1 77 DEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGV 121 (198)
T ss_dssp HHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcCCcEEEE
Confidence 778888999999999998765543 244778888888776543
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=87.28 E-value=1.5 Score=37.23 Aligned_cols=77 Identities=13% Similarity=0.077 Sum_probs=57.8
Q ss_pred CCCeEEEEc-CChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 38 RNARVLVLG-GTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 38 ~~~~VlV~G-a~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
.+++||=+| |+|..-+++++..-. +-.|+.+|.++..++.+.+... .++..+..|..+.+........+|+|++
T Consensus 73 pG~~VLDlGaGsG~~t~~la~~VG~---~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~ 149 (227)
T d1g8aa_ 73 PGKSVLYLGIASGTTASHVSDIVGW---EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCT---TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHHhCC---CCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEE
Confidence 357999999 567777777775533 4589999999988887766554 4577889999988876655668898887
Q ss_pred cCC
Q 014177 115 AAG 117 (429)
Q Consensus 115 ~ag 117 (429)
...
T Consensus 150 d~~ 152 (227)
T d1g8aa_ 150 DVA 152 (227)
T ss_dssp CCC
T ss_pred Ecc
Confidence 643
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=87.11 E-value=0.63 Score=39.24 Aligned_cols=74 Identities=16% Similarity=0.086 Sum_probs=51.1
Q ss_pred CCeEEEEc-CChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--CCCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLG-GTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--GKNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~G-a~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+++||=+| |+|..-+++++. .+..+|+.+|.++..++.+.+.. .+++.++..|..+.+........+|+|++.
T Consensus 57 g~~VLDlGcG~G~~~~~la~~----v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~ 132 (209)
T d1nt2a_ 57 DERVLYLGAASGTTVSHLADI----VDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 132 (209)
T ss_dssp SCEEEEETCTTSHHHHHHHHH----TTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCEEEEeCCcCCHHHHHHHHh----ccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEec
Confidence 47999999 344443444433 23348999999988776654433 257889999999887666566678888876
Q ss_pred C
Q 014177 116 A 116 (429)
Q Consensus 116 a 116 (429)
.
T Consensus 133 ~ 133 (209)
T d1nt2a_ 133 I 133 (209)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=86.09 E-value=0.55 Score=37.28 Aligned_cols=37 Identities=22% Similarity=0.160 Sum_probs=29.7
Q ss_pred CCeEEEEc-CChHHHHHHHHHHhHcCCCceEEEEecCchh
Q 014177 39 NARVLVLG-GTGRVGGSTAVALSKLCPDLQIVVGSRNREK 77 (429)
Q Consensus 39 ~~~VlV~G-a~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~ 77 (429)
.++++|++ ++|++|..++..|+++ |.+|+++.+...-
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~--G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVHLA 76 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSCTT
T ss_pred CCceEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcc
Confidence 45677762 3699999999999998 8999999887543
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=85.86 E-value=0.29 Score=43.38 Aligned_cols=32 Identities=28% Similarity=0.421 Sum_probs=27.8
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR 75 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~ 75 (429)
+|+|+|| |.+|..++..|+++ |. +|++.+|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~--G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTR--GWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHT--TCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHc--CCCcEEEEeCCC
Confidence 6999995 99999999999997 64 699998864
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=85.80 E-value=1.9 Score=36.68 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=52.8
Q ss_pred CCeEEEEc-CChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--CCcEEEEeeCCChHHHHHHhcCccEEEec
Q 014177 39 NARVLVLG-GTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--KNSEFAEVNIYNEGSLLMALRDVDLVVHA 115 (429)
Q Consensus 39 ~~~VlV~G-a~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~ 115 (429)
+++||=+| |+|+.-+++++. .++..|+.+|.++..++.+.+... +++..+..|..++.........+|++++.
T Consensus 75 G~~VLDlGcGsG~~~~~la~~----~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~ 150 (230)
T d1g8sa_ 75 DSKILYLGASAGTTPSHVADI----ADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED 150 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHH----TTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCEEEEeCEEcCHHHHHHHHh----CCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeecc
Confidence 57999999 566666666553 345699999999987777665433 46778889998887655544566777765
Q ss_pred CC
Q 014177 116 AG 117 (429)
Q Consensus 116 ag 117 (429)
..
T Consensus 151 ~~ 152 (230)
T d1g8sa_ 151 VA 152 (230)
T ss_dssp CC
T ss_pred cc
Confidence 43
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=85.73 E-value=0.54 Score=37.94 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=26.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEe
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGS 72 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~ 72 (429)
.+++|+|+|| |++|-.++..|.+.+....|+...
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEec
Confidence 4579999995 999999999999974344454444
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=85.73 E-value=0.42 Score=38.89 Aligned_cols=34 Identities=29% Similarity=0.218 Sum_probs=26.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEec
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSR 73 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R 73 (429)
+.+|+|+| +|++|-.++..|.+.+....++..++
T Consensus 3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~~ 36 (183)
T d1d7ya1 3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVVGD 36 (183)
T ss_dssp CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEec
Confidence 45799999 59999999999999855556665543
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.67 E-value=1.4 Score=38.96 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=47.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--------CCCcEEEEeeCCChHHHHHHhc-C
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--------GKNSEFAEVNIYNEGSLLMALR-D 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--------~~~v~~~~~Dl~d~~~l~~~~~-~ 108 (429)
..++|||+|+++. .+++.+++..+..+|++++.+++-.+...+.+ +++++.+..|. .+-+.+.-+ +
T Consensus 80 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da--~~~l~~~~~~~ 154 (290)
T d1xj5a_ 80 NPKKVLVIGGGDG---GVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDG--VAFLKNAAEGS 154 (290)
T ss_dssp CCCEEEEETCSSS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCH--HHHHHTSCTTC
T ss_pred CCcceEEecCCch---HHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccH--HHHHhhccccC
Confidence 4589999996442 35667777434458999999987655444332 25677777775 333444333 6
Q ss_pred ccEEEecC
Q 014177 109 VDLVVHAA 116 (429)
Q Consensus 109 ~DvVi~~a 116 (429)
.|+||.-+
T Consensus 155 yDvIi~D~ 162 (290)
T d1xj5a_ 155 YDAVIVDS 162 (290)
T ss_dssp EEEEEECC
T ss_pred ccEEEEcC
Confidence 89888754
|
| >d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: D-Alanine ligase N-terminal domain domain: D-Ala-D-Ala ligase, N-domain species: Escherichia coli, gene ddlB [TaxId: 562]
Probab=85.39 E-value=0.99 Score=32.98 Aligned_cols=62 Identities=13% Similarity=-0.004 Sum_probs=37.6
Q ss_pred HHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEecC-CCCCCCchHHHHH
Q 014177 51 VGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVHAA-GPFQQAPKCTVLE 129 (429)
Q Consensus 51 iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~~a-gp~~~~~~~~v~~ 129 (429)
.|+++.+.|.+. ++++...+.+.... ..+ ...++|+|||+. |.+...| .+-.
T Consensus 22 Sa~~v~~~L~~~--~~~v~~i~~~~~~~---------------------~~~--~~~~~d~vF~~lHG~~GEdG--~iQ~ 74 (96)
T d1iowa1 22 SGAAVLAGLREG--GIDAYPVDPKEVDV---------------------TQL--KSMGFQKVFIALHGRGGEDG--TLQG 74 (96)
T ss_dssp HHHHHHHHHHHT--TCEEEEECTTTSCG---------------------GGT--TTTTEEEEEECCCSTTTSSS--HHHH
T ss_pred hHHHHHHHHHHc--CeeEeeecCccccc---------------------hhh--hccCceeEEEeccCcchhcc--HHHH
Confidence 567777777665 67766655432211 001 122689999998 6666655 3445
Q ss_pred HHHHcCCcEE
Q 014177 130 AAIETKTAYI 139 (429)
Q Consensus 130 aa~~~gv~~v 139 (429)
.+...+++|.
T Consensus 75 ~le~l~IPyt 84 (96)
T d1iowa1 75 MLELMGLPYT 84 (96)
T ss_dssp HHHHHTCCBS
T ss_pred HHHHcCCCcc
Confidence 5566788876
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.11 E-value=1.7 Score=36.25 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=24.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEE
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVG 71 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~ 71 (429)
|||+++| ++.+|..+.+.|.+. +++|..+
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~--g~~I~~V 29 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAA--GYEISAI 29 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHT--TCEEEEE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHC--CCCEEEE
Confidence 6899997 577999999999987 7787654
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.11 E-value=0.4 Score=39.95 Aligned_cols=33 Identities=24% Similarity=0.175 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
..|+|+| +|..|..+|..|+++ |++|++..++.
T Consensus 6 yDviViG-aG~~Gl~~A~~La~~--G~~V~vlE~~~ 38 (297)
T d2bcgg1 6 YDVIVLG-TGITECILSGLLSVD--GKKVLHIDKQD 38 (297)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCEEEEC-cCHHHHHHHHHHHHC--CCCEEEEcCCC
Confidence 4699999 599999999999997 89999998865
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=85.11 E-value=0.83 Score=34.34 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=28.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcC-CCceEEEEecCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLC-PDLQIVVGSRNR 75 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v~~R~~ 75 (429)
.+++++|+|| |++|-.++..|.+.. .+.+|++..|.+
T Consensus 17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence 3589999995 999999998776532 267899988754
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.07 E-value=0.96 Score=40.06 Aligned_cols=74 Identities=11% Similarity=0.095 Sum_probs=48.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--------CCCcEEEEeeCCChHHHHHHhcCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--------GKNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--------~~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
..++|||+|+++. .+++.+++..+..+|+++..+++-.+...+.+ .++++++..|.. +-+++.-++.
T Consensus 78 ~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~--~~l~~~~~~y 152 (285)
T d2o07a1 78 NPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGF--EFMKQNQDAF 152 (285)
T ss_dssp SCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH--HHHHTCSSCE
T ss_pred CcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHH--HHHhcCCCCC
Confidence 4589999996432 35666776434568999999887655443332 257888877753 3344444478
Q ss_pred cEEEecC
Q 014177 110 DLVVHAA 116 (429)
Q Consensus 110 DvVi~~a 116 (429)
|+||.-+
T Consensus 153 DvIi~D~ 159 (285)
T d2o07a1 153 DVIITDS 159 (285)
T ss_dssp EEEEEEC
T ss_pred CEEEEcC
Confidence 9998764
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.97 E-value=0.48 Score=40.74 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCch
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNRE 76 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~~ 76 (429)
+++|+|+|| |..|..++..|.+. |. .|++..|+++
T Consensus 1 ~~~V~IvGa-G~aGl~~A~~L~~~--Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 1 PIDILIAGA-GIGGLSCALALHQA--GIGKVTLLESSSE 36 (288)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEESSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhC--CCCeEEEEeCCCC
Confidence 368999995 99999999999987 74 8889888654
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=84.85 E-value=1.3 Score=39.62 Aligned_cols=74 Identities=14% Similarity=0.115 Sum_probs=47.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC--------CCcEEEEeeCCChHHHHHHhcCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG--------KNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~--------~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
..++|||+|+++ | .+++.+++..+..+|.++..+++-.+...+.++ ++++++..|.. +-+++.-++.
T Consensus 106 ~pk~VLIiGgG~--G-~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~--~~l~~~~~~y 180 (312)
T d2b2ca1 106 DPKRVLIIGGGD--G-GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF--EFLKNHKNEF 180 (312)
T ss_dssp SCCEEEEESCTT--S-HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH--HHHHHCTTCE
T ss_pred CCCeEEEeCCCc--h-HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHH--HHHHhCCCCC
Confidence 458999999643 2 256667774334589999999887665544432 45666666652 3354444478
Q ss_pred cEEEecC
Q 014177 110 DLVVHAA 116 (429)
Q Consensus 110 DvVi~~a 116 (429)
|+||.-+
T Consensus 181 DvII~D~ 187 (312)
T d2b2ca1 181 DVIITDS 187 (312)
T ss_dssp EEEEECC
T ss_pred CEEEEcC
Confidence 9999764
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=84.84 E-value=1.3 Score=39.40 Aligned_cols=74 Identities=15% Similarity=0.092 Sum_probs=47.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--------CCCcEEEEeeCCChHHHHHHhcCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--------GKNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--------~~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
..++|||+|+++. .+++.+++..+..+|++++.+++-.+...+.+ .++++++..|.. +-+++.-++.
T Consensus 89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~--~~l~~~~~~y 163 (295)
T d1inla_ 89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGA--EYVRKFKNEF 163 (295)
T ss_dssp SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH--HHGGGCSSCE
T ss_pred CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHH--HHHhcCCCCC
Confidence 3589999996443 35677777544568999999987655433322 256777777763 2233333378
Q ss_pred cEEEecC
Q 014177 110 DLVVHAA 116 (429)
Q Consensus 110 DvVi~~a 116 (429)
|+||.-+
T Consensus 164 DvIi~D~ 170 (295)
T d1inla_ 164 DVIIIDS 170 (295)
T ss_dssp EEEEEEC
T ss_pred CEEEEcC
Confidence 9988653
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=84.76 E-value=0.36 Score=42.11 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
..|+|+|| |.+|..++..|+++ |++|+++++..
T Consensus 4 yDvvIIGa-Gi~Gls~A~~La~~--G~~V~viE~~~ 36 (281)
T d2gf3a1 4 FDVIVVGA-GSMGMAAGYQLAKQ--GVKTLLVDAFD 36 (281)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHT--TCCEEEECSSC
T ss_pred CCEEEECc-CHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 46999995 99999999999998 89999998753
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.59 E-value=0.49 Score=41.43 Aligned_cols=34 Identities=18% Similarity=0.440 Sum_probs=29.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
+..||+|+| +|.-|-..+..|.++ |++|++.-.+
T Consensus 4 ~~~kViVIG-aG~aGL~aA~~L~~~--G~~V~VlEa~ 37 (449)
T d2dw4a2 4 KTGKVIIIG-SGVSGLAAARQLQSF--GMDVTLLEAR 37 (449)
T ss_dssp CCCEEEEEC-CBHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhC--CCCEEEEeCC
Confidence 457899999 599999999999997 8999998654
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=83.53 E-value=0.53 Score=37.47 Aligned_cols=31 Identities=26% Similarity=0.427 Sum_probs=26.1
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRN 74 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~ 74 (429)
.||+|+|| |++|..++..|.+ +.+|+++++.
T Consensus 1 ~rVvIIGg-G~~G~e~A~~l~~---~~~Vtvv~~~ 31 (167)
T d1xhca1 1 SKVVIVGN-GPGGFELAKQLSQ---TYEVTVIDKE 31 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT---TSEEEEECSS
T ss_pred CeEEEECC-cHHHHHHHHHHHc---CCCEEEEecc
Confidence 38999995 9999999999965 4689998864
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=83.25 E-value=3.1 Score=36.31 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=47.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh--------CCCcEEEEeeCCChHHHHHHhcCc
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL--------GKNSEFAEVNIYNEGSLLMALRDV 109 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l--------~~~v~~~~~Dl~d~~~l~~~~~~~ 109 (429)
..++|||+|+++ |. +++.+++..+..+|+++..+++-.+...+.+ .++++++..|.. +-+++.-++.
T Consensus 75 ~p~~vLiiGgG~--G~-~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~--~~l~~~~~~y 149 (274)
T d1iy9a_ 75 NPEHVLVVGGGD--GG-VIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGF--MHIAKSENQY 149 (274)
T ss_dssp SCCEEEEESCTT--CH-HHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSH--HHHHTCCSCE
T ss_pred CcceEEecCCCC--cH-HHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHH--HHHhhcCCCC
Confidence 458999999643 22 4555566433468999999987655443322 146788887773 3344444479
Q ss_pred cEEEecC
Q 014177 110 DLVVHAA 116 (429)
Q Consensus 110 DvVi~~a 116 (429)
|+||.-+
T Consensus 150 DvIi~D~ 156 (274)
T d1iy9a_ 150 DVIMVDS 156 (274)
T ss_dssp EEEEESC
T ss_pred CEEEEcC
Confidence 9998765
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=83.00 E-value=0.46 Score=35.38 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=29.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCc
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNR 75 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~ 75 (429)
+.+++|+|+|+| +|.-|..++..|++. ..+++...|+.
T Consensus 28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~--ak~v~~~~~r~ 65 (107)
T d2gv8a2 28 ELFVGESVLVVG-GASSANDLVRHLTPV--AKHPIYQSLLG 65 (107)
T ss_dssp GGGTTCCEEEEC-SSHHHHHHHHHHTTT--SCSSEEEECTT
T ss_pred hhcCCCeEEEEC-CCCCHHHHHHHHHHh--cCEEEEEEecC
Confidence 458899999999 589999999999885 33455555543
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.72 E-value=0.56 Score=39.85 Aligned_cols=72 Identities=10% Similarity=0.029 Sum_probs=47.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhC---------------------CCcEEEEeeC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLG---------------------KNSEFAEVNI 96 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~---------------------~~v~~~~~Dl 96 (429)
.+.+||.+| || .|+. +..|+++ |++|+.+|.++..++...++.. .++++...|+
T Consensus 45 ~~~rvLd~G-CG-~G~~-a~~LA~~--G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 119 (229)
T d2bzga1 45 SGLRVFFPL-CG-KAVE-MKWFADR--GHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSI 119 (229)
T ss_dssp CSCEEEETT-CT-TCTH-HHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCG
T ss_pred CCCEEEEeC-CC-CcHH-HHHHHhC--CCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcch
Confidence 457999999 56 5654 6667776 8999999999988876655432 2455666666
Q ss_pred CChHHHHHHhcCccEEEecC
Q 014177 97 YNEGSLLMALRDVDLVVHAA 116 (429)
Q Consensus 97 ~d~~~l~~~~~~~DvVi~~a 116 (429)
.+... ......|+|+.+.
T Consensus 120 ~~l~~--~~~~~fd~i~~~~ 137 (229)
T d2bzga1 120 FDLPR--TNIGKFDMIWDRG 137 (229)
T ss_dssp GGGGG--SCCCCEEEEEESS
T ss_pred hhccc--cccCceeEEEEEE
Confidence 54321 1122567777654
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=82.59 E-value=0.82 Score=36.44 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=37.7
Q ss_pred cccccccccccccccccccccccccCCccCCCCCCCeEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecC
Q 014177 5 LPRLNSTATAIMASATSATKETVLDGAHFQMKNRNARVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRN 74 (429)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~ 74 (429)
||+.|.....++|.-.+.- ...+++|+|+|| |.+|.-.+..+.+. +. .|+++.|.
T Consensus 23 L~~~~~~~~~~~~~~~~~~------------p~~~~kVvVIGG-GdtA~D~A~~a~r~--GA~~V~vi~rr 78 (153)
T d1gtea3 23 LPLVAKSSKAGMCACHSPL------------PSIRGAVIVLGA-GDTAFDCATSALRC--GARRVFLVFRK 78 (153)
T ss_dssp HHHHHHHHCBTTBSCCCCC------------CCCCSEEEEECS-SHHHHHHHHHHHHT--TCSEEEEECSS
T ss_pred HHHHHhccccCCCcccCcc------------ccCCCEEEEECC-ChhHHHHHHHHHHc--CCcceeEEEeC
Confidence 6666666666666543331 113468999995 99999999998886 44 57777664
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=82.27 E-value=1.3 Score=33.23 Aligned_cols=38 Identities=29% Similarity=0.347 Sum_probs=29.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCC-CceEEEEecCch
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCP-DLQIVVGSRNRE 76 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~-g~~v~v~~R~~~ 76 (429)
.+++++|+|| |++|-.++..|.+.+. +.+|+++.|...
T Consensus 19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 3579999995 9999999987765432 468999887543
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=82.21 E-value=0.86 Score=38.89 Aligned_cols=73 Identities=18% Similarity=0.064 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHH---hCCCcEEEEeeCCChHHHHHHhcCccEEE
Q 014177 37 NRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVST---LGKNSEFAEVNIYNEGSLLMALRDVDLVV 113 (429)
Q Consensus 37 ~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~---l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi 113 (429)
...++||=+|+ | .|+ ++..|++. +.+|+.+|.+++-++...+. .+.+++++..|+.+.+ .-+..|+|+
T Consensus 36 ~~~~~vLDiGC-G-~G~-~~~~l~~~--g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~i~ 106 (246)
T d1y8ca_ 36 LVFDDYLDLAC-G-TGN-LTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN----INRKFDLIT 106 (246)
T ss_dssp CCTTEEEEETC-T-TST-THHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC----CSCCEEEEE
T ss_pred CCCCeEEEEeC-c-CCH-HHHHHHHh--CCccEeeccchhhhhhccccccccCccceeeccchhhhc----ccccccccc
Confidence 34578999994 5 454 45667776 67999999998766544332 2346888888887643 234689999
Q ss_pred ecCCC
Q 014177 114 HAAGP 118 (429)
Q Consensus 114 ~~agp 118 (429)
.+.+.
T Consensus 107 ~~~~~ 111 (246)
T d1y8ca_ 107 CCLDS 111 (246)
T ss_dssp ECTTG
T ss_pred eeeee
Confidence 65443
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=81.93 E-value=0.55 Score=39.31 Aligned_cols=32 Identities=31% Similarity=0.472 Sum_probs=27.7
Q ss_pred eEEEEcCChHHHHHHHHHHhHcCCCc-eEEEEecCc
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLCPDL-QIVVGSRNR 75 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~~g~-~v~v~~R~~ 75 (429)
+|+|+|| |..|...|..|.++ |+ +|++..++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~--G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEA--GITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHT--TCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhC--CCCcEEEEECCC
Confidence 6999995 99999999999997 75 699988754
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.56 E-value=0.15 Score=43.37 Aligned_cols=23 Identities=39% Similarity=0.622 Sum_probs=20.8
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcC
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLC 63 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~ 63 (429)
|||+|+|| |.+|...|..|++++
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G 23 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERY 23 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHH
T ss_pred CEEEEECc-hHHHHHHHHHHHHCC
Confidence 68999995 999999999999983
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=81.44 E-value=1.8 Score=38.75 Aligned_cols=74 Identities=18% Similarity=0.115 Sum_probs=47.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHh---------CCCcEEEEeeCCChHHHHHHhcC
Q 014177 38 RNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTL---------GKNSEFAEVNIYNEGSLLMALRD 108 (429)
Q Consensus 38 ~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l---------~~~v~~~~~Dl~d~~~l~~~~~~ 108 (429)
..++|||+|+++ | .+++.+++..+..+|+++..+++-.+...+.+ .++++++..|..+ -+++.-++
T Consensus 77 ~pk~VLiiG~G~--G-~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~--~l~~~~~~ 151 (312)
T d1uira_ 77 EPKRVLIVGGGE--G-ATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA--YLERTEER 151 (312)
T ss_dssp CCCEEEEEECTT--S-HHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH--HHHHCCCC
T ss_pred CcceEEEeCCCc--h-HHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHH--HhhhcCCc
Confidence 468999999643 3 34555666445669999999988655443332 1467777777633 34444447
Q ss_pred ccEEEecC
Q 014177 109 VDLVVHAA 116 (429)
Q Consensus 109 ~DvVi~~a 116 (429)
.|+||.-+
T Consensus 152 yDvIi~D~ 159 (312)
T d1uira_ 152 YDVVIIDL 159 (312)
T ss_dssp EEEEEEEC
T ss_pred ccEEEEeC
Confidence 99988654
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=81.42 E-value=0.82 Score=38.45 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=31.0
Q ss_pred CeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCch
Q 014177 40 ARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNRE 76 (429)
Q Consensus 40 ~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~ 76 (429)
.||.|+| +|-.|...|..|.+.+.+++|++.++.+.
T Consensus 2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 4899999 59999999999988766889999988754
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=81.42 E-value=0.97 Score=38.19 Aligned_cols=76 Identities=18% Similarity=0.175 Sum_probs=48.9
Q ss_pred CCCC-CeEEEEcCChHHHHHHHHHHhHcC----CCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCcc
Q 014177 36 KNRN-ARVLVLGGTGRVGGSTAVALSKLC----PDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVD 110 (429)
Q Consensus 36 ~~~~-~~VlV~Ga~G~iG~~l~~~L~~~~----~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~D 110 (429)
.+++ |+|.|+| +|-.|.+=+..|.+++ .+.+|++.-|...+-.+.++.- .++. .|.+ .-++.++.+.+|
T Consensus 40 ~~kg~KkIaViG-YGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~d--Gf~v--~~~~-v~~v~EAv~~AD 113 (226)
T d1qmga2 40 AFKGIKQIGVIG-WGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAA--GFSE--ENGT-LGDMWETISGSD 113 (226)
T ss_dssp HTTTCSEEEEEC-CSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHT--TCCG--GGTC-EEEHHHHHHTCS
T ss_pred HhcCCCEEEEEE-eccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHc--CCcc--CCCc-ccCHHHHHhhCC
Confidence 3566 8999999 9999999999999852 2466877766544333333322 2211 1111 123567788999
Q ss_pred EEEecCC
Q 014177 111 LVVHAAG 117 (429)
Q Consensus 111 vVi~~ag 117 (429)
+|..+..
T Consensus 114 iVmiLlP 120 (226)
T d1qmga2 114 LVLLLIS 120 (226)
T ss_dssp EEEECSC
T ss_pred EEEEecc
Confidence 9998874
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=81.36 E-value=0.73 Score=38.53 Aligned_cols=100 Identities=18% Similarity=0.242 Sum_probs=63.5
Q ss_pred eEEEEcCChHHHHHHHHHHhHcC-CCceEEEEecCchhHHHH------------HHHhCC--CcEE-EEeeCCChHHHHH
Q 014177 41 RVLVLGGTGRVGGSTAVALSKLC-PDLQIVVGSRNREKGAAM------------VSTLGK--NSEF-AEVNIYNEGSLLM 104 (429)
Q Consensus 41 ~VlV~Ga~G~iG~~l~~~L~~~~-~g~~v~v~~R~~~~~~~l------------~~~l~~--~v~~-~~~Dl~d~~~l~~ 104 (429)
.|.|+| -|..|..++..|.+.+ .+.+++.++-+.+.++.. ...++. +.+. .++=..+.+.+.+
T Consensus 3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~ 81 (198)
T d1ofua1 3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE 81 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence 588999 4779999999998864 246778877766555321 111110 0000 0011125567888
Q ss_pred HhcCccEEEecCCCCCCCc---hHHHHHHHHHcCCcEEEe
Q 014177 105 ALRDVDLVVHAAGPFQQAP---KCTVLEAAIETKTAYIDV 141 (429)
Q Consensus 105 ~~~~~DvVi~~agp~~~~~---~~~v~~aa~~~gv~~vdi 141 (429)
.++++|+||-+||.-..+| ..-+++.|.+.|+..+-+
T Consensus 82 ~l~~~d~vfi~AGlGGGTGtgaapviA~~ake~g~lvvai 121 (198)
T d1ofua1 82 VLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAV 121 (198)
T ss_dssp HHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HhCCCCeEEEEecCCCCccccHHHHHHHHHHHcCCCEEEE
Confidence 8999999999998765543 234778888888766533
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=81.16 E-value=0.69 Score=39.34 Aligned_cols=38 Identities=21% Similarity=0.401 Sum_probs=31.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHH
Q 014177 39 NARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGA 79 (429)
Q Consensus 39 ~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~ 79 (429)
...|+|+|| |..|...+..|.+. |++|++++++..-..
T Consensus 2 ~yDViIIGa-G~aGl~aA~~la~~--G~~V~liEk~~~~g~ 39 (251)
T d2i0za1 2 HYDVIVIGG-GPSGLMAAIGAAEE--GANVLLLDKGNKLGR 39 (251)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEECSSSSSCH
T ss_pred cCCEEEECc-CHHHHHHHHHHHHC--CCcEEEEeCCCCCCc
Confidence 357999995 99999999999997 899999998765433
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=80.08 E-value=2.4 Score=35.42 Aligned_cols=72 Identities=17% Similarity=0.069 Sum_probs=52.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHhHcCCCceEEEEecCchhHHHHHHHhCCCcEEEEeeCCChHHHHHHhcCccEEEe
Q 014177 35 MKNRNARVLVLGGTGRVGGSTAVALSKLCPDLQIVVGSRNREKGAAMVSTLGKNSEFAEVNIYNEGSLLMALRDVDLVVH 114 (429)
Q Consensus 35 ~~~~~~~VlV~Ga~G~iG~~l~~~L~~~~~g~~v~v~~R~~~~~~~l~~~l~~~v~~~~~Dl~d~~~l~~~~~~~DvVi~ 114 (429)
..+++++||=+|+ | .|.. ++.|++. +.+|+.+|.+++.++...+....+++++..|+.+.. .-+..|+|+.
T Consensus 17 ~~~~~~~VLDiGc-G-~G~~-~~~l~~~--g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~----~~~~fD~I~~ 87 (225)
T d2p7ia1 17 PFFRPGNLLELGS-F-KGDF-TSRLQEH--FNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ----LPRRYDNIVL 87 (225)
T ss_dssp GGCCSSCEEEESC-T-TSHH-HHHHTTT--CSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC----CSSCEEEEEE
T ss_pred hhCCCCcEEEEeC-C-CcHH-HHHHHHc--CCeEEEEeCcHHHhhhhhcccccccccccccccccc----cccccccccc
Confidence 3467789999993 5 4554 4567776 678999999998887777666667888888876532 2247899885
Q ss_pred c
Q 014177 115 A 115 (429)
Q Consensus 115 ~ 115 (429)
.
T Consensus 88 ~ 88 (225)
T d2p7ia1 88 T 88 (225)
T ss_dssp E
T ss_pred c
Confidence 4
|