Citrus Sinensis ID: 014181
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 429 | ||||||
| 255552782 | 483 | conserved hypothetical protein [Ricinus | 0.990 | 0.879 | 0.571 | 1e-141 | |
| 296087747 | 479 | unnamed protein product [Vitis vinifera] | 0.990 | 0.887 | 0.577 | 1e-139 | |
| 224140901 | 478 | predicted protein [Populus trichocarpa] | 0.927 | 0.832 | 0.580 | 1e-136 | |
| 225452618 | 532 | PREDICTED: uncharacterized protein LOC10 | 0.776 | 0.625 | 0.714 | 1e-135 | |
| 449461897 | 439 | PREDICTED: uncharacterized protein LOC10 | 0.904 | 0.883 | 0.610 | 1e-133 | |
| 255638564 | 440 | unknown [Glycine max] | 0.965 | 0.940 | 0.562 | 1e-132 | |
| 356572108 | 440 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.943 | 0.555 | 1e-132 | |
| 356550488 | 436 | PREDICTED: uncharacterized protein LOC10 | 0.897 | 0.883 | 0.607 | 1e-132 | |
| 356497824 | 512 | PREDICTED: uncharacterized protein LOC10 | 0.769 | 0.644 | 0.658 | 1e-130 | |
| 255558294 | 512 | conserved hypothetical protein [Ricinus | 0.755 | 0.632 | 0.688 | 1e-128 |
| >gi|255552782|ref|XP_002517434.1| conserved hypothetical protein [Ricinus communis] gi|223543445|gb|EEF44976.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/485 (57%), Positives = 337/485 (69%), Gaps = 60/485 (12%)
Query: 1 MGACGSK-----FLSKKKLKS---------KRISKRRVSFNKLDKIDECGKRDARCHSNS 46
MG C S+ LS KK K+ +RI KRRVS + + D G+ D R SN
Sbjct: 1 MGGCASRPKGCIGLSSKKKKNGTNKPRIRRRRIIKRRVSSHNFGRPDLSGQTD-RSFSNP 59
Query: 47 STLLASKEFAWFDCCSALDQSEIDDDFYSVHDDA-------STLRVASPRDSFNQKD--- 96
+ + AW D S L +SEIDD+FYSVH+D S L ++SPRD FNQKD
Sbjct: 60 AFQGSIDAAAWSDAISVL-ESEIDDEFYSVHEDGFSVIGTESVLSISSPRD-FNQKDYYE 117
Query: 97 ---------------QNGDAWNGQ-----------------LPCVASAMSSDDKARVSSP 124
GD Q LPC+AS + S +K R SP
Sbjct: 118 NNTRNEVVKAQVSGNGGGDVNVMQMQQQVEENNCGLLPNICLPCLASTVPSIEKKRSLSP 177
Query: 125 RA-PGAKRKLLSRLSFKFKEGHNNQNSFPPKVLLQRPKAGSSLSFCPLEKKMSNSWSPIE 183
P ++RK RLSFK++EGH+ F PK LLQRP AGSSL CPLEKKM + WSPIE
Sbjct: 178 SGTPSSRRKPSLRLSFKWREGHSTPTFFSPKALLQRPIAGSSLPCCPLEKKMPDCWSPIE 237
Query: 184 PSTFRVRGQNYLRDKKKDFAPNFAAYCPFAADVFLSQRKIDHIARFVDLPVIDSSEELPS 243
PSTF+VRGQNY RDKKKD APN AA+ PF AD+FLS RKI HIAR+V+LP + +++E+PS
Sbjct: 238 PSTFKVRGQNYFRDKKKDRAPNCAAFYPFGADLFLSPRKIHHIARYVELPTVSATDEVPS 297
Query: 244 ILVVNLQIPLYPAAIFQGENDGEGMNLVLYFKLSESYSKDLPVHFQEHVNRIINDEVERV 303
+LVVNLQIPLYPA IFQ ENDGEGM+LV+YFKLSE+YSK+LP HF++++NR+INDEVERV
Sbjct: 298 VLVVNLQIPLYPATIFQSENDGEGMSLVMYFKLSENYSKELPSHFRDNINRLINDEVERV 357
Query: 304 KGFPLDTINSFRERLKILSRLVNGEDLHLSTTEKKILNTYNEKPVLSRPQHEFYLGENYF 363
+GFP+DTI FRERLKIL RL N ++L L + EKK+LN YNEKPVLSRPQHEFYLGE+YF
Sbjct: 358 RGFPVDTIAPFRERLKILGRLANADELQLGSAEKKLLNAYNEKPVLSRPQHEFYLGESYF 417
Query: 364 EIDLDVHRFSYLSRKTFAAFQDRFKLCKLDFGLTIQENKTENLPENMLCCIRLNEIDYSN 423
EIDLD+H+FSY+SRK F AFQDR KLC LDFGLTIQ +K E+LPE+MLCC+RLNE+DY+
Sbjct: 418 EIDLDMHKFSYISRKGFEAFQDRLKLCVLDFGLTIQGHKAEDLPEHMLCCMRLNELDYAK 477
Query: 424 YRQLG 428
++QLG
Sbjct: 478 HQQLG 482
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296087747|emb|CBI35003.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224140901|ref|XP_002323816.1| predicted protein [Populus trichocarpa] gi|118482376|gb|ABK93111.1| unknown [Populus trichocarpa] gi|222866818|gb|EEF03949.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225452618|ref|XP_002276119.1| PREDICTED: uncharacterized protein LOC100266380 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449461897|ref|XP_004148678.1| PREDICTED: uncharacterized protein LOC101209394 [Cucumis sativus] gi|449519689|ref|XP_004166867.1| PREDICTED: uncharacterized protein LOC101231709 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255638564|gb|ACU19589.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356572108|ref|XP_003554212.1| PREDICTED: uncharacterized protein LOC100808949 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356550488|ref|XP_003543619.1| PREDICTED: uncharacterized protein LOC100797844 isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356497824|ref|XP_003517757.1| PREDICTED: uncharacterized protein LOC100787325 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255558294|ref|XP_002520174.1| conserved hypothetical protein [Ricinus communis] gi|223540666|gb|EEF42229.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 429 | ||||||
| TAIR|locus:2012848 | 485 | AT1G10410 [Arabidopsis thalian | 0.750 | 0.663 | 0.631 | 9.7e-118 | |
| TAIR|locus:2202877 | 492 | CW14 "AT1G59650" [Arabidopsis | 0.804 | 0.701 | 0.598 | 7.8e-110 | |
| TAIR|locus:2093868 | 513 | AT3G29180 "AT3G29180" [Arabido | 0.724 | 0.606 | 0.528 | 7.1e-90 | |
| TAIR|locus:2175648 | 511 | AT5G39430 "AT5G39430" [Arabido | 0.729 | 0.612 | 0.493 | 1.2e-83 | |
| TAIR|locus:2014819 | 504 | AT1G13970 "AT1G13970" [Arabido | 0.631 | 0.537 | 0.519 | 2e-79 | |
| TAIR|locus:2102465 | 733 | AT3G54800 [Arabidopsis thalian | 0.188 | 0.110 | 0.310 | 4.4e-05 | |
| TAIR|locus:2198866 | 313 | AT1G06050 "AT1G06050" [Arabido | 0.221 | 0.303 | 0.271 | 0.00065 |
| TAIR|locus:2012848 AT1G10410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1097 (391.2 bits), Expect = 9.7e-118, Sum P(2) = 9.7e-118
Identities = 204/323 (63%), Positives = 256/323 (79%)
Query: 106 LPCV-ASAMSSDDKARVSSPRAPGAKRKLLSRLSFKFKEGHNNQNSFPPKVLLQRPKAGS 164
LPC+ + + S DK R S P +++K RLS+K++EGH + F K+ L+RP AGS
Sbjct: 158 LPCLNTTTVPSIDKRRSLSSSPPSSRKKSSLRLSYKWREGHASGALFLSKMQLKRPIAGS 217
Query: 165 SLSFCPLEKKMSNSWSPIEPSTFRVRGQNYLRDKKKDFAPNFAAYCPFAADVFLSQRKID 224
+ FCP++KKM + WS I+P++FRVRG+ YLR+KKK+FAP+ AAY PF DVFLS+ KI
Sbjct: 218 QVPFCPIDKKMLDCWSTIDPNSFRVRGKTYLREKKKEFAPSHAAYNPFGVDVFLSEHKIH 277
Query: 225 HIARFVDLPVIDSSEELPSILVVNLQIPLYPAAIFQGENDGEGMNLVLYFKLSESYSKDL 284
H+A++V LPV +S +LPSILVVN+QIPLYP AIFQGE+DGEGMN+VLYFKLS++YSK+L
Sbjct: 278 HVAQYVKLPVTTTSTKLPSILVVNVQIPLYPTAIFQGESDGEGMNIVLYFKLSDNYSKEL 337
Query: 285 PVHFQEHVNRIINDEVERVKGFPLDTINSFRERLKILSRLVNGEDLHLSTTEKKILNTYN 344
P+HFQE + R+I+DEVE+VKGFPLDT FRERLKIL R+ N +DLHLS EKK++ YN
Sbjct: 338 PLHFQESIRRLIDDEVEKVKGFPLDTTAPFRERLKILGRVANVDDLHLSGPEKKLMQAYN 397
Query: 345 EKPVLSRPQHEFYLGENYFEIDLDVHRFSYLSRKTFAAFQDRFKLCKLDFGLTIQENKTE 404
EKPVLSRPQHEFYLG+NYFEID+D+HRF Y+SRK F F DR K+C LD GLTIQ NK E
Sbjct: 398 EKPVLSRPQHEFYLGDNYFEIDIDMHRFGYISRKGFETFIDRLKICVLDVGLTIQGNKPE 457
Query: 405 NLPENMLCCIRLNEIDYSNYRQL 427
LPE +LCC+RLN ID+ NY QL
Sbjct: 458 ELPEQILCCVRLNGIDFMNYHQL 480
|
|
| TAIR|locus:2202877 CW14 "AT1G59650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2093868 AT3G29180 "AT3G29180" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2175648 AT5G39430 "AT5G39430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014819 AT1G13970 "AT1G13970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2102465 AT3G54800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2198866 AT1G06050 "AT1G06050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 429 | |||
| pfam07059 | 215 | pfam07059, DUF1336, Protein of unknown function (D | 2e-75 |
| >gnl|CDD|219281 pfam07059, DUF1336, Protein of unknown function (DUF1336) | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 2e-75
Identities = 98/246 (39%), Positives = 128/246 (52%), Gaps = 35/246 (14%)
Query: 179 WSPIEPSTFRVRGQNYLRDKKKDFAPNFAAYCPFAADVFLSQRKIDHIARFVDLPVID-S 237
WS +PSTF+VRG+ YL+DKKK A N Y D F S +KIDHIA DL V +
Sbjct: 1 WSEPDPSTFKVRGKTYLKDKKKIPAGNPL-YTLIGVDWFKSDKKIDHIANHPDLRVQKAA 59
Query: 238 SEELPSILVVNLQIPLYPAAIFQGENDGEGMNLVLYFKLSESYSKDLPVHFQEHVNRIIN 297
+ LP +L+VN+Q+P GEG +LVLYF L E K+L F + R ++
Sbjct: 60 KKGLPFVLIVNIQVP-----------GGEGYSLVLYFALEEPVEKELSPAFGSLLRRFVD 108
Query: 298 -DEVERVKGFPLDTINSFRERLKILSRLVNGEDLHLSTTEKKILNTYNEKPVL--SRPQH 354
DE F ERLKI+ R+V G S ++++ YNEKP L PQ
Sbjct: 109 GDE----DAFR-------NERLKIIPRIVKG-----SWIVRQLV--YNEKPCLVGKAPQC 150
Query: 355 EFYLGENYFEIDLDVHRFSYLSRKTFAAFQDRFKLCKLDFGLTIQENKTENLPENMLCCI 414
+Y G NY EID+D+ S ++RK F LD TIQ E LPE +L +
Sbjct: 151 NYYRGPNYLEIDVDIGS-SSIARKGLELFLGYLTNLVLDLAFTIQGQTEEELPERLLGAV 209
Query: 415 RLNEID 420
RLN+ID
Sbjct: 210 RLNKID 215
|
This family represents the C-terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function. Length = 215 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 429 | |||
| PF07059 | 227 | DUF1336: Protein of unknown function (DUF1336); In | 100.0 | |
| PLN00188 | 719 | enhanced disease resistance protein (EDR2); Provis | 100.0 |
| >PF07059 DUF1336: Protein of unknown function (DUF1336); InterPro: IPR009769 This entry represents the C terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-76 Score=565.54 Aligned_cols=222 Identities=43% Similarity=0.745 Sum_probs=209.3
Q ss_pred cccCCCCCeEEcCCCccCCCccccCCCCCccceeeeeEeeeCcccchhhccCCCcccccCC-CCCeEEEEEEEcCCCccc
Q 014181 179 WSPIEPSTFRVRGQNYLRDKKKDFAPNFAAYCPFAADVFLSQRKIDHIARFVDLPVIDSSE-ELPSILVVNLQIPLYPAA 257 (429)
Q Consensus 179 Ws~p~~s~FkVRG~~Yl~DKkKvpA~~~~l~~lvgvDlF~s~~kidhIa~~~~lp~~~~~~-~~P~vfIVNiqlP~~p~~ 257 (429)
||+|++++|+|||+|||+||||+||+++ +|+++|||||+|++|++|||+|++++.+.... +.|++||||||||+||++
T Consensus 1 Ws~p~~~~FkVRG~~Yl~DkkKvpa~~~-l~~lvgvDlf~s~~~~~hia~~~~~~~~~~~~~~~P~~fIVNlqvP~~p~~ 79 (227)
T PF07059_consen 1 WSEPDASTFKVRGPNYLKDKKKVPAGPP-LFELVGVDLFKSDKKIDHIARRPSSPVQKALEKGVPFTFIVNLQVPGYPPS 79 (227)
T ss_pred CCCCCCCEEEEeCCCcccCCCCCcCCCc-ceeeEEEEEEecCCcchhhhhCcCCccccccccCCCcEEEEEEEccCCccc
Confidence 9999999999999999999999999985 99999999999999999999999999877654 589999999999999999
Q ss_pred ccCCCCCCCCeEEEEEEeeCccccCCCCcchHHHhhhhhhhhhhhhcCCCCCChhhhh-hhcceeeeecCCCcccchhhH
Q 014181 258 IFQGENDGEGMNLVLYFKLSESYSKDLPVHFQEHVNRIINDEVERVKGFPLDTINSFR-ERLKILSRLVNGEDLHLSTTE 336 (429)
Q Consensus 258 ~F~~~~DGeg~slVlYF~~~e~~~~~l~~~f~~ll~rf~~deve~vkgf~~d~~d~fR-~RfKLIp~Vvng~wi~l~~~~ 336 (429)
+| ++.||+|||+|+||++++++.++.+++|.++++||++++ +.+|+|| +||||||+|+||+|+
T Consensus 80 ~f-~~~~~~~~s~V~Yf~~~~~~~~~~~~~~~~ll~rF~~gd---------~~~d~frn~RfKlIp~vv~gpwi------ 143 (227)
T PF07059_consen 80 MF-GEIDGPGYSLVLYFRMPEPIEDDDSPPFGRLLHRFLNGD---------EVEDAFRNERFKLIPRVVNGPWI------ 143 (227)
T ss_pred cc-cccccCCceEEEEEecCCccccccCchhHHHHHHHHhcC---------ccchhhhhccEEEEEEEcCCchh------
Confidence 99 999999999999999999998888889999999999743 1128899 899999999999999
Q ss_pred HHHhhhc-CCeeeeec--CceeeccCCCeEEEEEeccCchHHHHHHHHHhhhccceeEEeeeEeeecCCCCCCcccccce
Q 014181 337 KKILNTY-NEKPVLSR--PQHEFYLGENYFEIDLDVHRFSYLSRKTFAAFQDRFKLCKLDFGLTIQENKTENLPENMLCC 413 (429)
Q Consensus 337 r~l~~av-n~KPvLir--~~~~y~~G~nYlEiDvDI~sfS~iAr~~l~l~~g~~k~lvvD~GfvIEG~~eeELPE~lLG~ 413 (429)
+++++ |+|||||| ++|+||+|+||||||||||+ |+|||+++++|++|+++|||||||||||+++|||||+||||
T Consensus 144 --vr~~v~~~kP~lig~~~~~~y~~g~~y~E~dvdi~s-s~~a~~~~~~~~~~~~~lvvd~gf~ieg~~~~ELPE~lLg~ 220 (227)
T PF07059_consen 144 --VRKAVYNGKPVLIGKKLQHRYFRGPNYLEIDVDIHS-SYIARKVLHLVRGYLKKLVVDMGFVIEGQTEEELPERLLGC 220 (227)
T ss_pred --hhhhhcCCCceeecCccceEEeeCCCeEEEEEEecc-HHHHHHHHHHHHhhhceEEEEEEEEecCCChhhCchheEeE
Confidence 56666 99999998 69999999999999999999 99999999999999999999999999999999999999999
Q ss_pred EEecccc
Q 014181 414 IRLNEID 420 (429)
Q Consensus 414 vRl~~iD 420 (429)
+||+|||
T Consensus 221 ~Rl~~id 227 (227)
T PF07059_consen 221 VRLNHID 227 (227)
T ss_pred EEeeecC
Confidence 9999998
|
|
| >PLN00188 enhanced disease resistance protein (EDR2); Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 429 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.3 bits (127), Expect = 1e-07
Identities = 67/474 (14%), Positives = 138/474 (29%), Gaps = 147/474 (31%)
Query: 1 MGACGSKFLSKKKLKSKRISKRRVSFN----KLDKIDECGKRDARCHSNSSTLLASKEFA 56
+ G +++ S ++ + ++ F L C+S + L ++
Sbjct: 158 VLGSGKTWVALDVCLSYKV-QCKMDFKIFWLNL----------KNCNSPETVLEMLQKL- 205
Query: 57 WFDCCSALDQSEIDDDFYSVHDDASTLRV------ASPRDSFNQKD-QNG-----DAWNG 104
+D ++ S D +S +++ A R K +N + N
Sbjct: 206 ----LYQIDP-----NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256
Query: 105 Q------LPC----------VASAMSSDDKARVSS-----PRAPGAKRKLLSR-LSFKFK 142
+ L C V +S+ +S P + LL + L + +
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 143 EGHNNQNSFPPKVLLQRPKAGSSLSFCPLEKK-MSNSWSPIEPSTFRVRGQNYLRDKKKD 201
+ P +VL P+ LS + +W ++ DK
Sbjct: 317 D-------LPREVLTTNPRR---LSIIAESIRDGLATWDNW---------KHVNCDKLTT 357
Query: 202 FAPNFAAYCPFAADVFLSQRK-IDHIARFVDLPVIDSSEELPSILVVNLQIPLYPAAIFQ 260
+ L+ + ++ F L V S +P+IL L + ++ I
Sbjct: 358 -----------IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL---LSL-IWFDVIK- 401
Query: 261 GENDGEGMNLVLYFKLSESYSKDLPVHFQEHVNRIINDEVERVKGFPLDTINSFRERLKI 320
+ +N + + L E K+ + I + L++
Sbjct: 402 -SDVMVVVNKLHKYSLVEKQPKESTIS--------IPS---------IY--------LEL 435
Query: 321 LSRLVNGEDLHLSTTEKKILNTYNEKPVLSRPQHEFYL--GENYFEIDLDVHRFSYLSRK 378
+L N LH + I++ YN + + + YF +S++
Sbjct: 436 KVKLENEYALH-----RSIVDHYNIP--KTFDSDDLIPPYLDQYF--------YSHIGHH 480
Query: 379 TFAAFQ----DRFKLCKLDFGLTIQENKTENLPENMLCCIRLNE--IDYSNYRQ 426
F++ LDF E K + + Y+
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFL--EQKIRHDSTAWNASGSILNTLQQLKFYKP 532
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00