Citrus Sinensis ID: 014185

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MNVEMKITSSTTMVFLFLVMSANFPGTFSYTKQIPAKLNSFQLPQPKSGAASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
ccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEccccccccccccccccccccccccccccHHHccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEEEcccccccccEEEEcccccccccccccccccEEEEccccccHHHHHHHHccccccEEEEEcccccccEEEEccccccccccEEEcccccccccccEEEEEEEEEEccEEEccccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEEEEccccEEEEccccEEEEEEcccEEEEEEEEcccccccccEEEEcEEEEEEEEEEEccccEEEEEcccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccHHHHHHHcccccccccccccccccccccccEEEEEEEEEccccccEEEEEEccccccEEEcccccHHccccccccccccccccccccHHHHHccccccccccccccccEEEEEEEccccccEEEEEEEEEEEcccccccccccEEEcEEcccccccccccccccEcccccccccHHHHHHHccccccEEEEEEEccccEEEEEcccccccccEEEEEEEcccccccEEEEEccEEEEccEEEEccccEEEEEccccEEcccHHHHHHHHHHHccccccccccccccccccccEccccEEEEcccccccccEEEEEEcccccEEEcccHHHEEEEEcccEEEEEEccccccccccEEEEEEEEEEcEEEEEEccccEEEEEcccccccccccccc
MNVEMKITSSTTMVFLFLVMSanfpgtfsytkqipaklnsfqlpqpksgaaSSVFLRALGSIYPLGYFAvnltvgkppklfdfdfdtgsdltwvqcdapctgctkppekqykphknivpcsnprcaalhwpnpprckhpndqcdyeieygdggssigalvtdlfplrfsngsvfnvpltfgcgynqhnpgplsppdtagvlglgrgrISIVSQLREYGLIRNVIGhcigqngrgvlflgdgkvpssgvawtpmlqnsadlkhyilgpaellysgkscglkdltlifdsgasyayFTSRVYQEIVSLIMRDLigtplklapddktlpicwrgpfkalgQVTEYFKPLAlsftnrrnsvrlvvppeaylvISGRKNVCLGilngseaevgenniigeifmqdkmviydnekqrigwkpedcntllslnhfi
MNVEMKITSSTTMVFLFLVMSANFPGTFSYTKQIPAKLNSFQLPQPKSGAASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALsftnrrnsvrlvVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKqrigwkpedcntllslnhfi
MNVEMKITSSTTMVFLFLVMSANFPGTFSYTKQIPAKLNSFQLPQPKSGAASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
**********TTMVFLFLVMSANFPGTFSYTKQIPAKLNSF*********ASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTK*****YKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHN********TAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSL****
*********STTMVFLFLVMSANF************************************SIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAA*************DQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIG*****APDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLS*NH**
********SSTTMVFLFLVMSANFPGTFSYTKQIPAKLNSFQLPQPKSGAASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
*NVEMKITSSTTMVFLFLVMSANFPGTFSYTKQIPAKLNSFQLPQ*****ASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLS*****
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNVEMKITSSTTMVFLFLVMSANFPGTFSYTKQIPAKLNSFQLPQPKSGAASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHFI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query429 2.2.26 [Sep-21-2011]
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.853 0.892 0.407 2e-75
Q0IU52410 Aspartic proteinase Asp1 no no 0.853 0.892 0.4 4e-74
Q9S9K4475 Aspartic proteinase-like no no 0.799 0.722 0.282 8e-31
Q766C3437 Aspartic proteinase nepen N/A no 0.748 0.734 0.272 9e-22
Q766C2438 Aspartic proteinase nepen N/A no 0.750 0.735 0.270 9e-21
Q3EBM5447 Probable aspartic proteas no no 0.780 0.749 0.283 1e-20
Q9LX20528 Aspartic proteinase-like no no 0.764 0.621 0.263 5e-20
Q9LZL3453 Aspartic proteinase PCS1 no no 0.766 0.726 0.251 4e-14
Q6XBF8437 Aspartic proteinase CDR1 no no 0.762 0.748 0.254 1e-13
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.745 0.64 0.264 2e-13
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function desciption
 Score =  283 bits (724), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/385 (40%), Positives = 225/385 (58%), Gaps = 19/385 (4%)

Query: 51  ASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQ 110
           +S+V L   G++YP+G+F V + +G P K +  D DTGS LTW+QCD PC  C K P   
Sbjct: 21  SSAVVLELHGNVYPIGHFFVTMNIGDPAKPYFLDIDTGSTLTWLQCDYPCINCNKVPHGL 80

Query: 111 YKPH-KNIVPCSNPRCAALH--WPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLR 167
           YKP  K  V C+  RCA L+     P +C  P +QC Y I+Y  GGSSIG L+ D F L 
Sbjct: 81  YKPELKYAVKCTEQRCADLYADLRKPMKCG-PKNQCHYGIQY-VGGSSIGVLIVDSFSLP 138

Query: 168 FSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI-RNVIGH 226
            SNG+     + FGCGYNQ       P    G+LGLGRG+++++SQL+  G+I ++V+GH
Sbjct: 139 ASNGT-NPTSIAFGCGYNQGKNNHNVPTPVNGILGLGRGKVTLLSQLKSQGVITKHVLGH 197

Query: 227 CIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYI--LGPAELLYSGKSCGLKDLTL 284
           CI   G+G LF GD KVP+SGV W+PM   + + KHY    G  +   + K      + +
Sbjct: 198 CISSKGKGFLFFGDAKVPTSGVTWSPM---NREHKHYSPRQGTLQFNSNSKPISAAPMEV 254

Query: 285 IFDSGASYAYFTSRVYQEIVSLIMRDLIGTP---LKLAPDDKTLPICWRG--PFKALGQV 339
           IFDSGA+Y YF  + Y   +S++   L        ++   D+ L +CW+G    + + +V
Sbjct: 255 IFDSGATYTYFALQPYHATLSVVKSTLSKECKFLTEVKEKDRALTVCWKGKDKIRTIDEV 314

Query: 340 TEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAE--VGENNIIGEIF 397
            + F+ L+L F +      L +PPE YL+IS   +VCLGIL+GS+    +   N+IG I 
Sbjct: 315 KKCFRSLSLKFADGDKKATLEIPPEHYLIISQEGHVCLGILDGSKEHPSLAGTNLIGGIT 374

Query: 398 MQDKMVIYDNEKQRIGWKPEDCNTL 422
           M D+MVIYD+E+  +GW    C+ +
Sbjct: 375 MLDQMVIYDSERSLLGWVNYQCDRI 399
Possesses protease activity in vitro.
Oryza sativa subsp. indica (taxid: 39946)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
224082314410 predicted protein [Populus trichocarpa] 0.944 0.987 0.555 1e-129
15219354405 aspartyl protease-like protein [Arabidop 0.862 0.913 0.573 1e-127
224066811422 predicted protein [Populus trichocarpa] 0.955 0.971 0.535 1e-125
297841447410 hypothetical protein ARALYDRAFT_475850 [ 0.869 0.909 0.564 1e-124
255558640424 nucellin, putative [Ricinus communis] gi 0.934 0.945 0.533 1e-123
356554625452 PREDICTED: aspartic proteinase Asp1-like 0.969 0.920 0.521 1e-123
356509401407 PREDICTED: aspartic proteinase Asp1-like 0.857 0.904 0.569 1e-119
30699261466 aspartyl protease-like protein [Arabidop 0.911 0.839 0.540 1e-119
297842525467 hypothetical protein ARALYDRAFT_476912 [ 0.878 0.807 0.552 1e-118
30699263432 aspartyl protease-like protein [Arabidop 0.899 0.893 0.542 1e-117
>gi|224082314|ref|XP_002306645.1| predicted protein [Populus trichocarpa] gi|222856094|gb|EEE93641.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/412 (55%), Positives = 291/412 (70%), Gaps = 7/412 (1%)

Query: 13  MVFLFLVMSANFPGTFSYTKQIPAKLNSFQLPQPKSGAASSVFLRALGSIYPLGYFAVNL 72
           M   F+V+SA+  G FS   Q P K  S      + G  SSVF R  G++YP GY++V L
Sbjct: 1   MFLFFIVISADLQGCFSAASQTPIKGESSTPANDRVG--SSVFFRVTGNVYPTGYYSVIL 58

Query: 73  TVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPN 132
            +G PPK FDFD DTGSDLTWVQCDAPC GCTKP +K YKP  N+VPCSN  C A+    
Sbjct: 59  NIGNPPKAFDFDIDTGSDLTWVQCDAPCKGCTKPRDKLYKPKNNLVPCSNSLCQAVSTGE 118

Query: 133 PPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPL 192
              C  P+DQCDYEIEY D GSSIG L++D FPLR SNG++    + FGCGY+Q + GP 
Sbjct: 119 NYHCDAPDDQCDYEIEYADLGSSIGVLLSDSFPLRLSNGTLLQPKMAFGCGYDQKHLGPH 178

Query: 193 SPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTP 252
            PPDTAG+LGLGRG++SI+SQLR  G+ +NV+GHC  +   G LF GD   PSS + WTP
Sbjct: 179 PPPDTAGILGLGRGKVSILSQLRTLGITQNVVGHCFSRARGGFLFFGDHLFPSSRITWTP 238

Query: 253 MLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLI 312
           ML++S+D   Y  GPAELL+ GK  G+K L LIFDSG+SY YF ++VYQ I++L+ +DL 
Sbjct: 239 MLRSSSD-TLYSSGPAELLFGGKPTGIKGLQLIFDSGSSYTYFNAQVYQSILNLVRKDLA 297

Query: 313 GTPLKLAPDDKTLPICWR--GPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVIS 370
           G PLK AP +K L +CW+   P K++  +  YFKPL +SF N +N V+L + PE YL+I+
Sbjct: 298 GKPLKDAP-EKELAVCWKTAKPIKSILDIKSYFKPLTISFMNAKN-VQLQLAPEDYLIIT 355

Query: 371 GRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 422
              NVCLGILNGSE ++G  N+IG+IFMQD++VIYDNEKQ+IGW P +C+ L
Sbjct: 356 KDGNVCLGILNGSEQQLGNFNVIGDIFMQDRVVIYDNEKQQIGWFPANCDRL 407

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|15219354|ref|NP_175079.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|12320825|gb|AAG50556.1|AC074228_11 nucellin, putative [Arabidopsis thaliana] gi|332193902|gb|AEE32023.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224066811|ref|XP_002302227.1| predicted protein [Populus trichocarpa] gi|222843953|gb|EEE81500.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297841447|ref|XP_002888605.1| hypothetical protein ARALYDRAFT_475850 [Arabidopsis lyrata subsp. lyrata] gi|297334446|gb|EFH64864.1| hypothetical protein ARALYDRAFT_475850 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255558640|ref|XP_002520345.1| nucellin, putative [Ricinus communis] gi|223540564|gb|EEF42131.1| nucellin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356554625|ref|XP_003545645.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max] Back     alignment and taxonomy information
>gi|356509401|ref|XP_003523438.1| PREDICTED: aspartic proteinase Asp1-like [Glycine max] Back     alignment and taxonomy information
>gi|30699261|ref|NP_850981.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|17065172|gb|AAL32740.1| nucellin-like protein [Arabidopsis thaliana] gi|24899795|gb|AAN65112.1| nucellin-like protein [Arabidopsis thaliana] gi|332197863|gb|AEE35984.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297842525|ref|XP_002889144.1| hypothetical protein ARALYDRAFT_476912 [Arabidopsis lyrata subsp. lyrata] gi|297334985|gb|EFH65403.1| hypothetical protein ARALYDRAFT_476912 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30699263|ref|NP_177872.3| aspartyl protease-like protein [Arabidopsis thaliana] gi|332197862|gb|AEE35983.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
TAIR|locus:2205861405 AT1G44130 [Arabidopsis thalian 0.911 0.965 0.559 3.5e-123
TAIR|locus:2204725466 AT1G77480 [Arabidopsis thalian 0.948 0.873 0.526 5.4e-118
TAIR|locus:2028466583 AT1G49050 [Arabidopsis thalian 0.909 0.668 0.382 2.8e-73
TAIR|locus:2200023492 AT1G08210 [Arabidopsis thalian 0.771 0.672 0.295 1.9e-35
TAIR|locus:2040545512 AT2G36670 [Arabidopsis thalian 0.815 0.683 0.279 2e-33
TAIR|locus:2167776 631 AT5G43100 [Arabidopsis thalian 0.909 0.618 0.269 4.9e-33
TAIR|locus:2172661493 AT5G22850 [Arabidopsis thalian 0.794 0.691 0.273 1.4e-32
TAIR|locus:2183617482 AT5G36260 [Arabidopsis thalian 0.790 0.703 0.299 7.7e-32
TAIR|locus:2200365475 AT1G65240 [Arabidopsis thalian 0.792 0.715 0.284 1.6e-31
TAIR|locus:2075512488 AT3G02740 [Arabidopsis thalian 0.780 0.686 0.301 8.8e-31
TAIR|locus:2205861 AT1G44130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1211 (431.4 bits), Expect = 3.5e-123, P = 3.5e-123
 Identities = 222/397 (55%), Positives = 283/397 (71%)

Query:    28 FSYTKQIPAKLNSFQLPQPKSGAASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDT 87
             F +   +P   +S      KS  +S VF  + G+++PLGY++V + +G PPK F FD DT
Sbjct:    10 FLFLVIVPLSKSSIFKTFIKSSPSSVVFPLS-GNVFPLGYYSVLMQIGSPPKAFQFDIDT 68

Query:    88 GSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEI 147
             GSDLTWVQCDAPC+GCT PP  QYKP  NI+PCSNP C ALHWPN P C +P +QCDYE+
Sbjct:    69 GSDLTWVQCDAPCSGCTLPPNLQYKPKGNIIPCSNPICTALHWPNKPHCPNPQEQCDYEV 128

Query:   148 EYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR 207
             +Y D GSS+GALVTD FPL+  NGS    P+ FGCGY+Q  P    PP TAGVLGLGRG+
Sbjct:   129 KYADQGSSMGALVTDQFPLKLVNGSFMQPPVAFGCGYDQSYPSAHPPPATAGVLGLGRGK 188

Query:   208 ISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGP 267
             I +++QL   GL RNV+GHC+   G G LF GD  VPS GVAWTP+L  S D  HY  GP
Sbjct:   189 IGLLTQLVSAGLTRNVVGHCLSSKGGGFLFFGDNLVPSIGVAWTPLL--SQD-NHYTTGP 245

Query:   268 AELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPI 327
             A+LL++GK  GLK L LIFD+G+SY YF S+ YQ I++LI  DL  +PLK+A +DKTLPI
Sbjct:   246 ADLLFNGKPTGLKGLKLIFDTGSSYTYFNSKAYQTIINLIGNDLKVSPLKVAKEDKTLPI 305

Query:   328 CWRG--PFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEA 385
             CW+G  PFK++ +V  +FK + ++FTN R + +L + PE YL++S   NVCLG+LNGSE 
Sbjct:   306 CWKGAKPFKSVLEVKNFFKTITINFTNGRRNTQLYLAPELYLIVSKTGNVCLGLLNGSEV 365

Query:   386 EVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTL 422
              +  +N+IG+I MQ  M+IYDNEKQ++GW   DCN L
Sbjct:   366 GLQNSNVIGDISMQGLMMIYDNEKQQLGWVSSDCNKL 402
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2204725 AT1G77480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028466 AT1G49050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040545 AT2G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167776 AT5G43100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200365 AT1G65240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075512 AT3G02740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT1G44130
nucellin protein, putative; nucellin protein, putative; FUNCTIONS IN- aspartic-type endopeptidase activity; INVOLVED IN- proteolysis; LOCATED IN- plant-type cell wall; EXPRESSED IN- stem, embryo, pedicel, stamen; EXPRESSED DURING- 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s- Peptidase aspartic, catalytic (InterPro-IPR009007), Peptidase A1 (InterPro-IPR001461), Peptidase aspartic, active site (InterPro-IPR001969); BEST Arabidopsis thaliana protein match is- nucellin protein, putative (TAIR-AT1G77480.2); Has 1109 Blast hits to 1105 [...] (405 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G42360
zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (236 aa)
   •    0.524
AT1G01680
U-box domain-containing protein; U-box domain-containing protein; FUNCTIONS IN- ubiquitin-prote [...] (308 aa)
   •    0.508
ACA13
calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13); [...] (1017 aa)
   •    0.505
YLS9
YLS9 (YELLOW-LEAF-SPECIFIC GENE 9); Encodes a protein whose sequence is similar to tobacco hair [...] (227 aa)
   •    0.500
AT3G47480
calcium-binding EF hand family protein; calcium-binding EF hand family protein; FUNCTIONS IN- c [...] (183 aa)
   •    0.499
AT5G02780
In2-1 protein, putative; In2-1 protein, putative; FUNCTIONS IN- molecular_function unknown; INV [...] (237 aa)
   •    0.489
anac042
anac042 (Arabidopsis NAC domain containing protein 42); transcription factor; Arabidopsis NAC d [...] (275 aa)
   •    0.481
AT1G08050
zinc finger (C3HC4-type RING finger) family protein; zinc finger (C3HC4-type RING finger) famil [...] (641 aa)
   •    0.481
AtRLP7
AtRLP7 (Receptor Like Protein 7); kinase/ protein binding; Receptor Like Protein 7 (AtRLP7); FU [...] (1019 aa)
   •    0.480
ATGSTU11
ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11); glutathione transferase; Encodes glutathione trans [...] (234 aa)
   •    0.480

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 1e-130
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 6e-49
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 8e-36
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 4e-34
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-23
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 2e-14
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 9e-13
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 6e-12
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 2e-10
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 1e-04
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 0.003
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information 
 Score =  377 bits (969), Expect = e-130
 Identities = 164/354 (46%), Positives = 197/354 (55%), Gaps = 81/354 (22%)

Query: 66  GYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC 125
           GY+ V + +G PPK +  D DTGSDLTW+QCDAPCTGC                      
Sbjct: 1   GYYYVTINIGNPPKPYFLDIDTGSDLTWLQCDAPCTGC---------------------- 38

Query: 126 AALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYN 185
                           QCDYEIEY DGGSS+G LVTD+F L+ +NGS     + FGCGY+
Sbjct: 39  ----------------QCDYEIEYADGGSSMGVLVTDIFSLKLTNGSRAKPRIAFGCGYD 82

Query: 186 QHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPS 245
           Q  P    PP T G+LGLGRG+IS+ SQL   G+I+NVIGHC+  NG G LF GD  VPS
Sbjct: 83  QQGPLLNPPPPTDGILGLGRGKISLPSQLASQGIIKNVIGHCLSSNGGGFLFFGDDLVPS 142

Query: 246 SGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASYAYFTSRVYQEIVS 305
           SGV WTPM + S   KHY  GPA LL++G+  G K L ++FDSG+SY YF ++       
Sbjct: 143 SGVTWTPMRRESQK-KHYSPGPASLLFNGQPTGGKGLEVVFDSGSSYTYFNAQA------ 195

Query: 306 LIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEA 365
                                               YFKPL L F     +  L +PPE 
Sbjct: 196 ------------------------------------YFKPLTLKFGKGWRTRLLEIPPEN 219

Query: 366 YLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDC 419
           YL+IS + NVCLGILNGSE  +G  NIIG+I MQ  MVIYDNEKQ+IGW   DC
Sbjct: 220 YLIISEKGNVCLGILNGSEIGLGNTNIIGDISMQGLMVIYDNEKQQIGWVRSDC 273

Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. This degradation is a characteristic of programmed cell death. Nucellins are plant aspartic proteases specifically expressed in nucellar cells during degradation. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region, and two other regions nearly identical to two regions of plant aspartic proteases. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. Although the three-dimensional structures of the two lobes are very similar, the amino acid sequences are more divergent, except for the conserved catalytic site motif. Length = 273
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 429
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.95
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.92
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.89
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.15
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.41
PF1365090 Asp_protease_2: Aspartyl protease 96.85
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.79
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 94.75
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.91
COG3577215 Predicted aspartyl protease [General function pred 93.59
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 93.04
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 92.26
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 90.51
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 90.31
PF1528461 PAGK: Phage-encoded virulence factor 89.62
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 87.07
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 86.31
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 85.85
PF1365090 Asp_protease_2: Aspartyl protease 85.43
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 84.47
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 81.49
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.2e-57  Score=450.23  Aligned_cols=331  Identities=27%  Similarity=0.519  Sum_probs=270.9

Q ss_pred             CCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCC----ccCCCcccccCCCCCCCCCCCCC
Q 014185           64 PLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKN----IVPCSNPRCAALHWPNPPRCKHP  139 (429)
Q Consensus        64 ~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S----~~~C~~~~C~~~~~~~t~~~~~~  139 (429)
                      .+++|+++|.||||||++.|++||||+++||+|. +|..|..+.++.|||++|    .++|.++.|..++.  ...|..+
T Consensus        81 ~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~-~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~--~~~c~~~  157 (431)
T PLN03146         81 NGGEYLMNISIGTPPVPILAIADTGSDLIWTQCK-PCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGN--QASCSDE  157 (431)
T ss_pred             CCccEEEEEEcCCCCceEEEEECCCCCcceEcCC-CCcccccCCCCcccCCCCCCCcccCCCCcccccCCC--CCCCCCC
Confidence            3668999999999999999999999999999999 999999888999999998    58999999987653  2346544


Q ss_pred             CCCCeeEeEeCCCCeEEEEEEEEEEEEeecCC-cccccceEEeeeeecCCCCCCCCCCCceEEecCCCCCcHHHHHhhcC
Q 014185          140 NDQCDYEIEYGDGGSSIGALVTDLFPLRFSNG-SVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYG  218 (429)
Q Consensus       140 ~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g-~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~l~~~g  218 (429)
                       +.|.|.+.|++|+.+.|.+++|+|+|+...+ ...++++.|||++...+.+.   ...+||||||++..|++.||..+ 
T Consensus       158 -~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~---~~~~GilGLG~~~~Sl~sql~~~-  232 (431)
T PLN03146        158 -NTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFD---EKGSGIVGLGGGPLSLISQLGSS-  232 (431)
T ss_pred             -CCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCcc---CCCceeEecCCCCccHHHHhhHh-
Confidence             5799999999997789999999999943211 24688999999998744321   35899999999999999999763 


Q ss_pred             CccceEEEEeCC-----CCceeEEeCCCCCCCC-CcEEeecccCCCCCCCEEeeecEEEECCEEeccCC--------CcE
Q 014185          219 LIRNVIGHCIGQ-----NGRGVLFLGDGKVPSS-GVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKD--------LTL  284 (429)
Q Consensus       219 ~i~~~Fsl~l~~-----~~~G~l~~Gd~~~~~g-~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~--------~~a  284 (429)
                       +.++||+||.+     ...|.|+||..+++.+ .+.|+|++.... ..+|.|.|++|+||++.+..+.        ..+
T Consensus       233 -~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~-~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~  310 (431)
T PLN03146        233 -IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDP-DTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNI  310 (431)
T ss_pred             -hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCC-CCeEEEeEEEEEECCEECcCCccccccCCCCcE
Confidence             55699999963     2479999996555554 589999985421 3789999999999999876532        479


Q ss_pred             EEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCC
Q 014185          285 IFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPE  364 (429)
Q Consensus       285 iiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~  364 (429)
                      ||||||++++||+++|++|.+++...+......  .....+..||+...      ...+|+|+|+|++    +++.|+++
T Consensus       311 iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~--~~~~~~~~C~~~~~------~~~~P~i~~~F~G----a~~~l~~~  378 (431)
T PLN03146        311 IIDSGTTLTLLPSDFYSELESAVEEAIGGERVS--DPQGLLSLCYSSTS------DIKLPIITAHFTG----ADVKLQPL  378 (431)
T ss_pred             EEeCCccceecCHHHHHHHHHHHHHHhccccCC--CCCCCCCccccCCC------CCCCCeEEEEECC----CeeecCcc
Confidence            999999999999999999999998877532111  12234567987421      1358999999986    79999999


Q ss_pred             eEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCC
Q 014185          365 AYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNT  421 (429)
Q Consensus       365 ~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~  421 (429)
                      +|+++..++..|+++....     +.||||+.|||++|+|||++++|||||+.+|+.
T Consensus       379 ~~~~~~~~~~~Cl~~~~~~-----~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        379 NTFVKVSEDLVCFAMIPTS-----SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             eeEEEcCCCcEEEEEecCC-----CceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            9999877778899887542     369999999999999999999999999999975

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>PF15284 PAGK: Phage-encoded virulence factor Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 1e-06
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 1e-05
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 2e-05
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 4e-04
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 5e-04
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 6e-04
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure 
Iteration: 1

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 145/368 (39%), Gaps = 77/368 (20%)
Query: 67  YFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCA 126
           Y+ V +++G PP+ F   FDTGS   WV   + C+        ++KP ++       +  
Sbjct: 14  YYGV-ISIGTPPESFKVIFDTGSSNLWVSS-SHCSAQACSNHNKFKPRQSSTYVETGKTV 71
Query: 127 ALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQ 186
                              ++ YG GG   G L  D   +    GS  N  L    G +Q
Sbjct: 72  -------------------DLTYGTGGMR-GILGQDT--VSVGGGSDPNQEL----GESQ 105
Query: 187 HNPGPL---SPPDTAGVLGL------GRGRISIVSQLREYGLI-RNVIGHCI---GQNGR 233
             PGP    +P D  G+LGL        G + +   +    L+ +++    +   G NG 
Sbjct: 106 TEPGPFQAAAPFD--GILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGS 163
Query: 234 GVLFLG-DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLTLIFDSGASY 292
            V+  G D    +  + W P+       K++ +    +  +G++   +    I D+G   
Sbjct: 164 EVMLGGVDNSHYTGSIHWIPVTAE----KYWQVALDGITVNGQTAACEGCQAIVDTG--- 216
Query: 293 AYFTSRVYQEIVSL--IMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSF 350
              TS++   + +L  IM+D+  +                   + +G          ++F
Sbjct: 217 ---TSKIVAPVSALANIMKDIGAS---------------ENQGEMMGNCASVQSLPDITF 258
Query: 351 TNRRNSVRLVVPPEAYLVISGRKNVCLGIL--NGSEAEVGENNIIGEIFMQDKMVIYDNE 408
           T   N V+  +PP AY  I G +  C   L  +G  +   E  I G++F+++   IYD  
Sbjct: 259 T--INGVKQPLPPSAY--IEGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRT 314
Query: 409 KQRIGWKP 416
             ++G+ P
Sbjct: 315 NNKVGFAP 322
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-70
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 5e-68
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 4e-65
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-17
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 2e-16
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 8e-16
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 2e-15
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 4e-14
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 8e-13
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 4e-12
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 7e-12
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 4e-11
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 1e-10
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 1e-10
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 1e-10
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 1e-10
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 2e-10
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 2e-10
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 3e-10
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 3e-10
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 7e-10
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-09
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 2e-09
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 3e-09
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 8e-09
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 1e-08
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 1e-08
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-08
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 2e-08
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 4e-08
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-07
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 8e-05
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-04
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  227 bits (579), Expect = 2e-70
 Identities = 62/398 (15%), Positives = 123/398 (30%), Gaps = 43/398 (10%)

Query: 66  GYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC 125
             +   +    P    +   D G    WV CD      T  P +            +  C
Sbjct: 20  LQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQC--SLSGSIAC 77

Query: 126 AALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLT-----F 180
                   P C + N    +        ++ G +  D+  +  ++GS     +T     F
Sbjct: 78  GDCFNGPRPGC-NNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIF 136

Query: 181 GCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIG--QNGRGVLFL 238
            C     +          G+ GLGR RI++ SQ       +     C+    +   V+  
Sbjct: 137 SCAPT--SLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIF 194

Query: 239 GDGK--------VPSSGVAWTPMLQNSADLK----------HYILGPAELLYSGKSCGLK 280
           G+          V    + +TP+L N                Y +G   +  + K   L 
Sbjct: 195 GNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALN 254

Query: 281 DLTL----------IFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWR 330
              L             +   Y    + +Y+ +    +++     +           C+ 
Sbjct: 255 TSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFS 314

Query: 331 GPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGEN 390
                  ++      + L    +  SV   +     +V      VCLG+++G    +  +
Sbjct: 315 TDNILSTRLGPSVPSIDLVL--QSESVVWTITGSNSMVYINDNVVCLGVVDGGS-NLRTS 371

Query: 391 NIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNHF 428
            +IG   ++D +V +D    R+G+      +  +  +F
Sbjct: 372 IVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANF 409
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.85
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.59
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 93.35
2hs1_A99 HIV-1 protease; ultra-high resolution active site 87.62
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 87.6
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 85.35
3ec0_A99 Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1 85.21
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 80.28
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=1.4e-59  Score=462.71  Aligned_cols=351  Identities=18%  Similarity=0.339  Sum_probs=278.3

Q ss_pred             CCceeEEeeccCCCCCceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCCCCCCCCCCCCCcCCCCccCCCcccccCCC
Q 014185           50 AASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRCAALH  129 (429)
Q Consensus        50 ~~~~~~~p~~~~~~~~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c~~C~~~~~~~y~~~~S~~~C~~~~C~~~~  129 (429)
                      +++.+.+|+.++. .+++|+++|.||||||++.|+|||||+++||+|. +|   .  ....|.    .++|.++.|...+
T Consensus         5 ~~~~~~~pv~~d~-~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c---~--~Sst~~----~v~C~s~~C~~~~   73 (413)
T 3vla_A            5 RPSALVVPVKKDA-STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN---Y--VSSTYR----PVRCRTSQCSLSG   73 (413)
T ss_dssp             CCSEEEEEEEECT-TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS---C--CCTTCE----ECBTTSHHHHHTT
T ss_pred             CCccEEEEeeecC-CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC---C--CCCCcC----ccCCCcccccccc
Confidence            4678899999875 6899999999999999999999999999999987 55   2  111222    4899999998765


Q ss_pred             CCCC--------CCCCCCCCCCeeEeEeC-CCCeEEEEEEEEEEEEeecCCc-----ccccceEEeeeeecCCCCCCCCC
Q 014185          130 WPNP--------PRCKHPNDQCDYEIEYG-DGGSSIGALVTDLFPLRFSNGS-----VFNVPLTFGCGYNQHNPGPLSPP  195 (429)
Q Consensus       130 ~~~t--------~~~~~~~~~~~~~~~Y~-~gs~~~G~~~~D~v~l~~~~g~-----~~~~~~~fg~~~~~~~~~~~~~~  195 (429)
                      .+..        ..|.  ++.|.|.+.|+ +++.+.|.+++|+|+|+..+|.     +.++++.|||++.......+  .
T Consensus        74 ~~~~~~c~s~~~~~c~--~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~--~  149 (413)
T 3vla_A           74 SIACGDCFNGPRPGCN--NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLA--S  149 (413)
T ss_dssp             CCEEECCSSCCBTTBC--SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSC--T
T ss_pred             cCCCcccccCCCCCCC--CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcc--c
Confidence            3311        1233  25799999994 7778999999999999654443     57789999999985211112  5


Q ss_pred             CCceEEecCCCCCcHHHHHhhcCCccceEEEEeCC--CCceeEEeCCCC-------CCCCC-cEEeecccCCCC------
Q 014185          196 DTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQ--NGRGVLFLGDGK-------VPSSG-VAWTPMLQNSAD------  259 (429)
Q Consensus       196 ~~~GIlGLg~~~~s~~~~l~~~g~i~~~Fsl~l~~--~~~G~l~~Gd~~-------~~~g~-l~~~p~~~~~~~------  259 (429)
                      ..+||||||++..|++.||.+++.++++||+||.+  +..|.|+||+..       ++.++ ++|+|+...+..      
T Consensus       150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~  229 (413)
T 3vla_A          150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST  229 (413)
T ss_dssp             TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred             ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence            78999999999999999999998889999999986  467999999432       25678 999999976421      


Q ss_pred             ----CCCEEeeecEEEECCEEeccC----------CCcEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Q 014185          260 ----LKHYILGPAELLYSGKSCGLK----------DLTLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTL  325 (429)
Q Consensus       260 ----~~~w~v~l~~i~v~~~~~~~~----------~~~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~  325 (429)
                          ..+|.|.+++|+||++.+..+          ...+||||||++++||+++|++|.++|.+.+....+.+.+....+
T Consensus       230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~  309 (413)
T 3vla_A          230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPF  309 (413)
T ss_dssp             TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTC
T ss_pred             ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCC
Confidence                269999999999999988754          368999999999999999999999999987641112233233446


Q ss_pred             CceecCCCcCcccccccCccEEEEEeCCCCceEEEeCCCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEE
Q 014185          326 PICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIY  405 (429)
Q Consensus       326 ~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vf  405 (429)
                      ..||+.+.......+..+|+|+|+|+++  ++.++|++++|+++..++.+|++++..... ....||||+.|||++|+||
T Consensus       310 ~~C~~~~~~~~~~~~~~lP~i~f~f~g~--~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~-~~~~~IlGd~fl~~~~vvf  386 (413)
T 3vla_A          310 GACFSTDNILSTRLGPSVPSIDLVLQSE--SVVWTITGSNSMVYINDNVVCLGVVDGGSN-LRTSIVIGGHQLEDNLVQF  386 (413)
T ss_dssp             SCEEECTTCCEETTEECCCCEEEECSST--TCEEEECHHHHEEEEETTEEEECEEEEESS-CSSSEEECHHHHTTEEEEE
T ss_pred             cceeccCCccccccccCCCcEEEEEcCC--cEEEEeCccceEEEeCCCcEEEEEEecCCC-cccceeEehhhhcCeEEEE
Confidence            6799875433223345799999999984  489999999999987667889988765421 2358999999999999999


Q ss_pred             eCCCCEEEEecCC
Q 014185          406 DNEKQRIGWKPED  418 (429)
Q Consensus       406 D~~~~~iGfa~~~  418 (429)
                      |++++|||||++.
T Consensus       387 D~~~~riGfa~~~  399 (413)
T 3vla_A          387 DLATSRVGFSGTL  399 (413)
T ss_dssp             ETTTTEEEEEEEG
T ss_pred             ECCCCEEEEEEec
Confidence            9999999999864
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ... Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 429
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 4e-45
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 1e-31
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 5e-30
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 4e-28
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 1e-27
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 1e-27
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 3e-27
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 5e-26
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-25
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 8e-25
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-24
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 1e-24
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 3e-24
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 8e-24
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 1e-23
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-23
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 5e-23
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 9e-23
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-21
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 1e-20
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 2e-18
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 2e-17
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  158 bits (400), Expect = 4e-45
 Identities = 64/384 (16%), Positives = 115/384 (29%), Gaps = 49/384 (12%)

Query: 66  GYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHKNIVPCSNPRC 125
             + +    G          D    L W  CD                    +PCS+P C
Sbjct: 14  SLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAE-------------IPCSSPTC 55

Query: 126 AALHWPNPPRCKHP--------NDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVP 177
              +    P C  P             Y      G  + G+L    F    ++GS     
Sbjct: 56  LLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSK 115

Query: 178 LTFGCGYN--QHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGV 235
           +  G              P  + GV GL    +++ +Q+     + N    C+   G GV
Sbjct: 116 VNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGV 175

Query: 236 LFLGDGKVP----SSGVAWTPMLQNSADLKHYI----LGPAELLYSGKSCGLKDLTLIFD 287
              G G VP    +  + +TP++       HYI    +   +         L    ++  
Sbjct: 176 AIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLS 235

Query: 288 SGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKT------LPICWRGPFKALGQVTE 341
           +   Y      VY+ ++    + L       AP  +         +C+            
Sbjct: 236 TRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGY 295

Query: 342 YFKPLALSFTNRRNSVRLVVPPEAYLVISGRKNVCLGILNGSEAEVGEN----NIIGEIF 397
               + L            +  +  +V   +   C+  +       G+      I+G   
Sbjct: 296 AVPNVQLGL---DGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQ 352

Query: 398 MQDKMVIYDNEKQRIGWKPEDCNT 421
           M+D ++ +D EK+R+G+      T
Sbjct: 353 MEDFVLDFDMEKKRLGFSRLPHFT 376
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d2nmza199 Human immunodeficiency virus type 1 protease {Huma 85.62
d3ecga199 Human immunodeficiency virus type 2 (HIV-2) protea 83.89
d4fiva_113 Feline immunodeficiency virus (FIV) protease {Feli 83.1
d2fmba_104 EIAV protease {Equine infectious anemia virus [Tax 82.16
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=100.00  E-value=2.4e-54  Score=413.93  Aligned_cols=301  Identities=18%  Similarity=0.329  Sum_probs=250.9

Q ss_pred             CceEEEEEEeCCCCcEEEEEEecCCCceeeeCCCCC--CCCCC-------CCCCCCcCCCCccCCCcccccCCCCCCCCC
Q 014185           65 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPC--TGCTK-------PPEKQYKPHKNIVPCSNPRCAALHWPNPPR  135 (429)
Q Consensus        65 ~~~y~~~i~iGtP~q~~~~~~DTGSs~~wv~~~~~c--~~C~~-------~~~~~y~~~~S~~~C~~~~C~~~~~~~t~~  135 (429)
                      +..|+++|.||||||++.|++||||+++||+|. .|  ..|..       ..++.|+|++|               +|++
T Consensus        11 ~~~Y~~~i~iGtP~q~~~~i~DTGS~~~Wv~~~-~~~c~~~~~~~~~~~c~~~~~y~~~~S---------------sT~~   74 (334)
T d1j71a_          11 GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDT-DAECQVTYSGQTNNFCKQEGTFDPSSS---------------SSAQ   74 (334)
T ss_dssp             SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGGSSCCBCGGGC---------------TTCE
T ss_pred             CCEEEEEEEEcCCCeEEEEEEECCCcceEEeeC-CCCccccccccCCcccccCCcCCcccC---------------Cccc
Confidence            568999999999999999999999999999765 32  22221       24567999888               3554


Q ss_pred             CCCCCCCCeeEeEeCCCCeEEEEEEEEEEEEeecCCcccccceEEeeeeecCCCCCCCCCCCceEEecCCCC--------
Q 014185          136 CKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGR--------  207 (429)
Q Consensus       136 ~~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~l~~~~g~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~--------  207 (429)
                      .    ..|.+.+.|++|+++.|.+++|+++|    ++.+++++.||++...        ...+|++|||+..        
T Consensus        75 ~----~~~~~~~~Y~~g~~~~G~~~~D~~~~----g~~~~~~~~f~~~~~~--------~~~~GilGlg~~~~~~~~~~~  138 (334)
T d1j71a_          75 N----LNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTT--------SVDQGIMGIGFTADEAGYNLY  138 (334)
T ss_dssp             E----EEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEE--------SSSSCEEECSCGGGSSTTCCC
T ss_pred             C----CCcCEEEEeCCCceEEEEEEeeEEEE----eeeeccCceeeeeeee--------ccccCcccccccccccccccc
Confidence            3    67899999999879999999999999    8888999999999987        4569999999843        


Q ss_pred             CcHHHHHhhcCCc-cceEEEEeCC--CCceeEEeC--CCCCCCCCcEEeecccCCCCCCCEEeeecEEEECCEEeccCCC
Q 014185          208 ISIVSQLREYGLI-RNVIGHCIGQ--NGRGVLFLG--DGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDL  282 (429)
Q Consensus       208 ~s~~~~l~~~g~i-~~~Fsl~l~~--~~~G~l~~G--d~~~~~g~l~~~p~~~~~~~~~~w~v~l~~i~v~~~~~~~~~~  282 (429)
                      .+++.+|.+||.| +++|++|+.+  ..+|.|+||  |..++.+++.|+|+...    .+|.+.+++|.+++..+.. +.
T Consensus       139 ~~~~~~l~~q~~i~~~~fs~~l~~~~~~~g~l~lGg~d~~~~~g~~~~~~~~~~----~~~~v~l~~i~v~g~~~~~-~~  213 (334)
T d1j71a_         139 DNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS----VELRVHLGSINFDGTSVST-NA  213 (334)
T ss_dssp             CCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS----SSCEEEEEEEEETTEEEEE-EE
T ss_pred             chhhHHHHhccccccceEEEEeccCCCCCceEEecccChhhcccceeEeeeccc----cceEEeeceEEECCEEecc-cc
Confidence            3589999999999 9999999985  356999999  77888999999999866    7899999999999998765 56


Q ss_pred             cEEEecCCcceeecHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceecCCCcCcccccccCccEEEEEeCCCCceEEEeC
Q 014185          283 TLIFDSGASYAYFTSRVYQEIVSLIMRDLIGTPLKLAPDDKTLPICWRGPFKALGQVTEYFKPLALSFTNRRNSVRLVVP  362 (429)
Q Consensus       283 ~aiiDSGt~~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~~~~~g~~~~l~  362 (429)
                      .++|||||++++||+++|++|++.++.....     .  .    .||..+|-      ...|.++|+|++   |++++|+
T Consensus       214 ~aiiDSGt~~~~lp~~~~~~l~~~~~~~~~~-----~--~----~~~~~~~~------~~~p~i~f~f~~---g~~~~i~  273 (334)
T d1j71a_         214 DVVLDSGTTITYFSQSTADKFARIVGATWDS-----R--N----EIYRLPSC------DLSGDAVFNFDQ---GVKITVP  273 (334)
T ss_dssp             EEEECTTCSSEEECHHHHHHHHHHHTCEEET-----T--T----TEEECSSS------CCCSEEEEEEST---TCEEEEE
T ss_pred             cccccCCCcceeccHHHHHHHHHHhCCEEcC-----C--C----Ceeecccc------ccCCCceEEeCC---CEEEEEC
Confidence            8999999999999999999999998654331     1  1    12322221      235899999987   6999999


Q ss_pred             CCeEEEEeCCCcEEEEEEcCCCCCCCCceeEcccceeceEEEEeCCCCEEEEecCCCCCccccCc
Q 014185          363 PEAYLVISGRKNVCLGILNGSEAEVGENNIIGEIFMQDKMVIYDNEKQRIGWKPEDCNTLLSLNH  427 (429)
Q Consensus       363 ~~~y~~~~~~~~~C~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~iGfa~~~c~~~~~~~~  427 (429)
                      +++|+++..++..|+..+...     +.||||.+|||++|+|||+|++|||||+++|++.+++.+
T Consensus       274 ~~~y~~~~~~~~~C~~~i~~~-----~~~ILG~~fl~~~y~vfD~~n~~iGfA~~~~~~~~~v~~  333 (334)
T d1j71a_         274 LSELILKDSDSSICYFGISRN-----DANILGDNFLRRAYIVYDLDDKTISLAQVKYTSSSDISA  333 (334)
T ss_dssp             GGGGEEECSSSSCEEESEEEC-----TTCEECHHHHTTEEEEEETTTTEEEEEEECCCSCCCEEE
T ss_pred             hHHeEEecCCCCEEEEEecCC-----CCcEECHHhhCcEEEEEECCCCEEEEEECCCCCcCCeeE
Confidence            999999877777897555433     468999999999999999999999999999999988875
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]} Back     information, alignment and structure
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]} Back     information, alignment and structure
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]} Back     information, alignment and structure
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]} Back     information, alignment and structure