Citrus Sinensis ID: 014310

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------
Protein Sequence
MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPKVDPVTPKLVTPDPPRTERHPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSKAIN
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccEEccccccccccccEEEEEEEEEEEEEcccccccccccccEEEEEccccccccccccEEEEEEEEEccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccHHHHccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEcccccHEEEccccccccHHHHHHcccccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHcccEccccccccccccccccccccccEEEEEccccccccccccccccccccccccEEEEcccccccEEcccEEEEEEEEEEEEEccccccccccccEEEEEEEcccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccHHccccccccccccccccccccccccccccccccccccHcccccHHHHHHHHcccccccccccccccccccccHHccccccccccccccccccccccHcccccccccccccccccccccHHHcccccccc
Coil and Loop (DISEMBL)
magpswlvdsnrIATKiksasgtgdpervkwksnptkacpnchhvidnsdvahewpglprgvkfdpsdQEIIWHLLAKAgleglnphpfidefiptvdqdggicythpqnlpgvkqdgsaAHFFYRAIKAYSTGTrkrrkingddfgevrwhktgrtkpvmldgvqKGCKKIMVLYMSMVRGGKAEKTNWVMHQYhlgteedekdRDYVISKISYQQQQAKYGDKIEQDILEstgaiipkvdpvtpklvtpdpprterhpdfgprqespttdafdqqseirhveevqplcenpgsndkieaenhanvmvgnndngsqagddskwwdsesqNILDTQQLAEALTLCEEFLnsqsdgnandgtskgkpglsdyarLGSEHLKKDLEECqmlvhdpanieldtppefglsqlefnsqdsfipfggskain
Flexible Loop (DISEMBL)
magpswlvdsnriatkiksasgtgdpervkwksnptkacpnCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKaystgtrkrrkingddfgevrwhktgrtkpvmldgvqkGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLgteedekdrDYVISKISYQQQQAKYGDKIEQDILESTgaiipkvdpvtpklvtpdpprterhpdfgprqespttdaFDQQSEIRHVEEVQPLCENPGSNDKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNsqsdgnandgtskgkpgLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEfnsqdsfipfggskain
Low Complexity Region (SEG)
MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPKVDPVTPKLVTPDPPRTERHPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSKAIN
Disordered region (IsUnstruct)
*************************************ACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEE***DRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK*******************************************************************************************ILDTQQLAEALTLCEEF***************************************MLV*************************************
Disordered Region (DISOPRED)
*AGPSWLVDSNRIAT********************TKACPNC***************LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV****AEKTNWVMHQYHLG****EKDRDYVISKIS********************************************************************************************************************************TLC********************************************VHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSKA**
Disordered Region (DISEMBL)
MAGPSWLVDSNRIATKIK*************KSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPKVDPVTPKLVTPDPPRTERHPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSKAIN
Disordered Region (DISPRO)
*AGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQ*****************************************************DAFDQ*S*I*HV*EVQ*********D**E************************WDSESQNILDTQQLAEALTLCEEFLNSQS*****DGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSKAI*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPKVDPVTPKLVTPDPPRTERHPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSKAIN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	427	2.2.26 [Sep-21-2011]
Q6NQK2	449	NAC domain-containing pro	yes	no	0.983	0.935	0.598	1e-146
O81913	359	NAC domain-containing pro	no	no	0.393	0.467	0.284	3e-13
Q5PP28	394	NAC domain-containing pro	no	no	0.327	0.355	0.312	1e-10
O04017	375	Protein CUP-SHAPED COTYLE	no	no	0.355	0.405	0.294	5e-10
Q9FLJ2	336	NAC domain-containing pro	no	no	0.442	0.562	0.285	6e-10
Q39013	289	NAC domain-containing pro	no	no	0.381	0.564	0.275	7e-10
O81914	362	NAC domain-containing pro	no	no	0.384	0.453	0.283	1e-09
Q52QH4	318	NAC domain-containing pro	no	no	0.391	0.525	0.278	5e-09
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.372	0.521	0.268	9e-09
A2YMR0	425	NAC transcription factor	N/A	no	0.297	0.298	0.315	2e-08

>sp|Q6NQK2|NAC8_ARATH NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1

 Score =  519 bits (1336), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 271/453 (59%), Positives = 321/453 (70%), Gaps = 33/453 (7%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAG SWL+DSNRIATKI SAS + DP +V WKSNP++ CP C HVIDNSDV  +WPGLPR
Sbjct: 1   MAGRSWLIDSNRIATKIMSASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPR 60

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSD EIIWHLLAK+GL GL+ HPFIDEFIPTV+QD GICYTHP+NLPGVK DG+ 
Sbjct: 61  GVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTV 120

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF++AIKAYSTGTRKRRKI+ DDFG+VRWHKTGRTKPV+LDGVQ+GCKKIMVLY    
Sbjct: 121 SHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLY---- 176

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQ---AKYGDKIEQDILEST-GA 236
            GGKA KTNWVMHQYHLG EEDEK+ DYV+SKI YQQ Q    K GDK EQ++ E    A
Sbjct: 177 -GGKAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAA 235

Query: 237 IIPKVDPVTPKLVTPDPPRTER-------------HPDFGPRQESPTTDAFDQQSEIRHV 283
           + P  DPVTPKL TP+P    R               D+    E    +  +       V
Sbjct: 236 VTPTADPVTPKLATPEPRNAVRICSDSHIASDYVTPSDYVSAHEVSLAETSEVMCMEDEV 295

Query: 284 EEVQPLCENPGSNDKIE--AENHANVMVG-------NNDNGSQAGDDSKWWDSESQNILD 334
           + +QP  E P S  ++E   EN A  M+        + DN +Q  +D  W+DS SQ IL+
Sbjct: 296 QSIQPNHERPSSGPELEHGLENGAKEMLDDKEEQEKDRDNENQGEEDPTWFDSGSQFILN 355

Query: 335 TQQLAEALTLCEEFLNSQS-DGNANDGTSKGK-PGLSDYARLGSEHLKKDLEECQMLVHD 392
           +QQL EAL+LC++ L SQ  + N N G+ K K P ++DYA LG E  K+DLEECQ +V D
Sbjct: 356 SQQLVEALSLCDDLLGSQDREENTNSGSLKDKQPCIADYAHLGPEDFKRDLEECQKIVLD 415

Query: 393 PANIELDTPPEFGLSQLEFNSQDSFIPFGGSKA 425
           P+NIELDTPPEF LSQLEF SQDSF+ +G  K 
Sbjct: 416 PSNIELDTPPEFRLSQLEFGSQDSFLAWGTGKT 448

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 76.6 bits (187), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 22/190 (11%)

Query: 59  PRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG---VK 115
           P G +F P+D+EI+ H L    L+    H  +DE I TVD    IC   P +LP    +K
Sbjct: 4   PVGFRFRPNDEEIVDHYLRPKNLDSDTSH--VDEVISTVD----ICSFEPWDLPSKSMIK 57

Query: 116 QDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK---GCKKI 172
                 +FF      Y+ G ++RR+ N        W KTG+T  VM     +   G K++
Sbjct: 58  SRDGVWYFFSVKEMKYNRGDQQRRRTNSG-----FWKKTGKTMTVMRKRGNREKIGEKRV 112

Query: 173 MVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILE 232
           +V      +     KT+WVMH+YH  +    +   Y + K+ ++ ++ +         +E
Sbjct: 113 LVF-----KNRDGSKTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIE 167

Query: 233 STGAIIPKVD 242
              ++IP V+
Sbjct: 168 QIHSLIPLVN 177

Arabidopsis thaliana (taxid: 3702)

>sp|Q5PP28|NAC3_ARATH NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 20/160 (12%)

Query: 59  PRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG---VK 115
           P G++F P+D+EI+   L     +    H  +D FI TV     +C   P  LP    +K
Sbjct: 4   PVGLRFCPTDEEIVVDYLWPKNSDRDTSH--VDRFINTV----PVCRLDPWELPCQSRIK 57

Query: 116 QDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVL 175
               A  FF      Y  G ++ RK          W  TGR KP+M +  Q G KKI++ 
Sbjct: 58  LKDVAWCFFRPKENKYGRGDQQMRKTKSG-----FWKSTGRPKPIMRNRQQIGEKKILMF 112

Query: 176 YMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISY 215
           Y S     K  K++WV+H+YH G   ++    Y + K+ +
Sbjct: 113 YTS-----KESKSDWVIHEYH-GFSHNQMMMTYTLCKVMF 146

Arabidopsis thaliana (taxid: 3702)

>sp|O04017|NAC98_ARATH Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1

 Score = 66.2 bits (160), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 80/190 (42%), Gaps = 38/190 (20%)

Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D+E+I H L +  L+G     F    I  VD +       P  LPG  + 
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGC----FSSRAIAEVDLNK----CEPWQLPGRAKM 68

Query: 118 GSAAHFFYRAI-KAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK--GCKKIMV 174
           G    +F+    + Y TG R  R           W  TG+ + +         G KK +V
Sbjct: 69  GEKEWYFFSLRDRKYPTGLRTNRATEAG-----YWKATGKDREIFSSKTCALVGMKKTLV 123

Query: 175 LYMSMVRGGKAEKTNWVMHQYHL-------GTEEDEKDRDYVISKISYQQQQAKYGDKIE 227
            Y    R  K EK+NWVMH+Y L             KD ++VIS++             +
Sbjct: 124 FYKG--RAPKGEKSNWVMHEYRLEGKFSYHFISRSSKD-EWVISRV------------FQ 168

Query: 228 QDILESTGAI 237
           +  L STGA+
Sbjct: 169 KTTLASTGAV 178

Transcription activator of STM and KNAT6. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for the fusion of septa of gynoecia along the length of the ovaries. Activates the shoot formation in callus in a STM-dependent manner. Controls leaf margin development and required for leaf serration. Involved in axillary meristem initiation and separation of the meristem from the main stem. Regulates the phyllotaxy throughout the plant development. Seems to act as an inhibitor of cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 28/217 (12%)

Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D+E+I H L K  L+      F  + I  VD +     + P  LP + + 
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDT----SFSAKAIGEVDLNK----SEPWELPWMAKM 67

Query: 118 GSAA-HFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLY 176
           G    +FF    + Y TG R  R           W  TG+ K +       G KK +V Y
Sbjct: 68  GEKEWYFFCVRDRKYPTGLRTNRATEAG-----YWKATGKDKEIYRGKSLVGMKKTLVFY 122

Query: 177 MSMVRGGKAEKTNWVMHQYHLGTEEDEKD------RDYVISKISYQQQQAKYGDKIEQDI 230
               R  K +KTNWVMH+Y L  +    +       ++VI ++    Q++  G KI    
Sbjct: 123 RG--RAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVF---QKSAGGKKIPISS 177

Query: 231 LESTGAIIPKVDP-VTPKLVTPDP--PRTERHPDFGP 264
           L   G++    +P + P L    P   +T+  P + P
Sbjct: 178 LIRIGSLGTDFNPSLLPSLTDSSPYNDKTKTEPVYVP 214

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 65.5 bits (158), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 40/203 (19%)

Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D+E++ H L +         P I E          +    P  LPG+   
Sbjct: 7   LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEI--------DLYKYDPWELPGLALY 58

Query: 118 GSAAHFFYRAI-KAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK--GCKKIMV 174
           G    +F+    + Y  G+R  R       G   W  TG  KP+   G+ K  G KK +V
Sbjct: 59  GEKEWYFFSPRDRKYPNGSRPNRSA-----GSGYWKATGADKPI---GLPKPVGIKKALV 110

Query: 175 LYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDR--------DYVISKISYQQQQAK----- 221
            Y    +  K EKTNW+MH+Y L   +    +        D+V+ +I Y ++ A      
Sbjct: 111 FYAG--KAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRI-YNKKGATERRGP 167

Query: 222 -----YGDKIEQDILESTGAIIP 239
                YGD+I ++  + T  ++P
Sbjct: 168 PPPVVYGDEIMEEKPKVTEMVMP 190

Arabidopsis thaliana (taxid: 3702)

>sp|O81914|NAC5_ARATH NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 23/187 (12%)

Query: 59  PRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG---VK 115
           P G +F P+D EI+   L    LE    H  +DE I TVD    IC   P +LP    +K
Sbjct: 4   PVGFRFRPTDGEIVDIYLRPKNLESNTSH--VDEVISTVD----ICSFDPWDLPSHSRMK 57

Query: 116 QDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVML---DGVQKGCKKI 172
                 +FF R    Y  G R+ RK          W KTG T  +M    D  + G K++
Sbjct: 58  TRDQVWYFFGRKENKYGKGDRQIRKTKSG-----FWKKTGVTMDIMRKTGDREKIGEKRV 112

Query: 173 MVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILE 232
           +V      +     K++W MH+YH       +   Y + K+ ++ ++ ++       I +
Sbjct: 113 LVF-----KNHGGSKSDWAMHEYHATFSSPNQIMTYTLCKVKFKGERREFSVATGSGI-K 166

Query: 233 STGAIIP 239
            T ++IP
Sbjct: 167 HTHSLIP 173

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 27/194 (13%)

Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D+E++ H L +       P P I E    VD    +    P +LP     
Sbjct: 21  LPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAE----VD----LYKLDPWDLPEKALF 72

Query: 118 GSAAHFFYRAI-KAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK--GCKKIMV 174
           G    +F+    + Y  G+R  R       G   W  TG  KPV   G  +  G KK +V
Sbjct: 73  GRKEWYFFTPRDRKYPNGSRPNRAA-----GRGYWKATGADKPVAPKGSARTVGIKKALV 127

Query: 175 LYMSMVRGGKAEKTNWVMHQYHL--------GTEEDEKDRDYVISKISYQQQQAKYGDKI 226
            Y    +  +  KT+W+MH+Y L        G +  +K  ++V+ ++ Y ++      K+
Sbjct: 128 FYSG--KAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRL-YNKKNNWEKVKL 184

Query: 227 EQDILESTGAIIPK 240
           EQ  + S  A  P+
Sbjct: 185 EQQDVASVAAAAPR 198

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 20/179 (11%)

Query: 57  GLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQ 116
           G+P G +F P+D+E++ + L K     ++   F  E I  VD +       P +L    +
Sbjct: 7   GVPPGFRFHPTDEELLHYYLKKK----ISYEKFEMEVIKEVDLNK----IEPWDLQDRCK 58

Query: 117 DGSAA----HFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKI 172
            GS      +FF    + Y TG+R  R  +        W  TGR K +     + G +K 
Sbjct: 59  IGSTPQNEWYFFSHKDRKYPTGSRTNRATHSG-----FWKATGRDKCIRNSYKKIGMRKT 113

Query: 173 MVLYMSMVRGGKAEKTNWVMHQYHL-GTEEDEKDRDYVISKISYQQQQAKYGDKIEQDI 230
           +V Y    R    +KT+W+MH+Y +  TE+D  +  +V+ ++  ++   K G+ +  +I
Sbjct: 114 LVFYKG--RAPHGQKTDWIMHEYRIEDTEDDPCEDGWVVCRVFKKKNLFKVGNDVGSNI 170

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 61/146 (41%), Gaps = 19/146 (13%)

Query: 56  PGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVK 115
           P LP G +F P+D+E++ H L K       P   I E    VD    +    P  LP   
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAE----VD----LYKFDPWELPEKA 78

Query: 116 QDGSAAHFFYRAI-KAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK---GCKK 171
             G    +F+    + Y  G R  R           W  TG  KP+M  G  +   G KK
Sbjct: 79  NFGEQEWYFFSPRDRKYPNGARPNRAATSG-----YWKATGTDKPIMASGSTREKVGVKK 133

Query: 172 IMVLYMSMVRGGKAEKTNWVMHQYHL 197
            +V Y    +  K  KTNW+MH+Y L
Sbjct: 134 ALVFYRG--KPPKGVKTNWIMHEYRL 157

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	427
225423879	433	PREDICTED: NAC domain-containing protein	0.990	0.976	0.693	1e-169
297737867	430	unnamed protein product [Vitis vinifera]	0.981	0.974	0.693	1e-168
224099315	428	NAC domain protein, IPR003441 [Populus t	0.978	0.976	0.689	1e-167
224111738	422	NAC domain protein, IPR003441 [Populus t	0.976	0.988	0.706	1e-164
255566843	467	conserved hypothetical protein [Ricinus	0.967	0.884	0.652	1e-159
357488265	445	NAC domain-containing protein [Medicago	0.990	0.950	0.637	1e-158
388502202	445	unknown [Medicago truncatula]	0.990	0.950	0.635	1e-157
357488267	442	NAC domain-containing protein [Medicago	0.983	0.950	0.633	1e-157
449493468	419	PREDICTED: NAC domain-containing protein	0.969	0.988	0.659	1e-157
217074036	440	unknown [Medicago truncatula]	0.978	0.95	0.638	1e-156

>gi|225423879|ref|XP_002281522.1| PREDICTED: NAC domain-containing protein 8-like [Vitis vinifera]

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 301/434 (69%), Positives = 350/434 (80%), Gaps = 11/434 (2%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAG SWLVDSNR ATKIK+ASGT + ERVKWKSNP++ACPNC H+IDNSDV  EWPGLPR
Sbjct: 1   MAGMSWLVDSNRFATKIKNASGTRETERVKWKSNPSRACPNCQHIIDNSDVTQEWPGLPR 60

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQEIIWHLLAK G+  L  HPFIDEFIPTV++D GICYTHPQNLPGVKQDGSA
Sbjct: 61  GVKFDPSDQEIIWHLLAKVGVGNLEAHPFIDEFIPTVEEDDGICYTHPQNLPGVKQDGSA 120

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           AHFF++AIKAY+TGTRKRRKI+GD FG+VRWHKTG+TKPV+LDGVQ+GCKKIMVLY S+V
Sbjct: 121 AHFFHQAIKAYNTGTRKRRKIHGDVFGDVRWHKTGKTKPVILDGVQRGCKKIMVLYASIV 180

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
           RGGK EKTNWVMHQYHLGT EDEKD +YVISK+ YQQQQ K  DKIEQD  ES+GA+I K
Sbjct: 181 RGGKPEKTNWVMHQYHLGTGEDEKDGEYVISKVFYQQQQIKQSDKIEQDFPESSGALIAK 240

Query: 241 VDPVTPKLVTPDPPRTE-RHPDFGPRQESPTT--DAFDQQSEIRHVE-EVQPLCENPGSN 296
           VDPVTPK  TP+ P TE R+ DF P QESP    D+  QQ ++ H+E EVQ  CE     
Sbjct: 241 VDPVTPKSATPEHPLTERRNSDFNPGQESPIACMDSSVQQPDMGHLEGEVQTECEQIDCQ 300

Query: 297 DKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDG- 355
           + ++AEN  + ++ +NDN  +  +++KWWD+ESQ +LD+QQL E L++C+EFL SQS   
Sbjct: 301 NILKAENRVDEVLDHNDNHGE--EEAKWWDNESQFLLDSQQLVEGLSICDEFLQSQSPNR 358

Query: 356 ----NANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEF 411
               N NDG    KP LSDYA LG+E LKKDLE+CQ LV DPANIELDTPP+F LSQLEF
Sbjct: 359 EGHENGNDGHVTSKPRLSDYANLGAEDLKKDLEDCQDLVLDPANIELDTPPDFRLSQLEF 418

Query: 412 NSQDSFIPFGGSKA 425
            SQDSFI +GG + 
Sbjct: 419 GSQDSFIAWGGEQG 432

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737867|emb|CBI27068.3| unnamed protein product [Vitis vinifera]

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 298/430 (69%), Positives = 347/430 (80%), Gaps = 11/430 (2%)

Query: 5   SWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKF 64
           SWLVDSNR ATKIK+ASGT + ERVKWKSNP++ACPNC H+IDNSDV  EWPGLPRGVKF
Sbjct: 2   SWLVDSNRFATKIKNASGTRETERVKWKSNPSRACPNCQHIIDNSDVTQEWPGLPRGVKF 61

Query: 65  DPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFF 124
           DPSDQEIIWHLLAK G+  L  HPFIDEFIPTV++D GICYTHPQNLPGVKQDGSAAHFF
Sbjct: 62  DPSDQEIIWHLLAKVGVGNLEAHPFIDEFIPTVEEDDGICYTHPQNLPGVKQDGSAAHFF 121

Query: 125 YRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGK 184
           ++AIKAY+TGTRKRRKI+GD FG+VRWHKTG+TKPV+LDGVQ+GCKKIMVLY S+VRGGK
Sbjct: 122 HQAIKAYNTGTRKRRKIHGDVFGDVRWHKTGKTKPVILDGVQRGCKKIMVLYASIVRGGK 181

Query: 185 AEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPKVDPV 244
            EKTNWVMHQYHLGT EDEKD +YVISK+ YQQQQ K  DKIEQD  ES+GA+I KVDPV
Sbjct: 182 PEKTNWVMHQYHLGTGEDEKDGEYVISKVFYQQQQIKQSDKIEQDFPESSGALIAKVDPV 241

Query: 245 TPKLVTPDPPRTE-RHPDFGPRQESPTT--DAFDQQSEIRHVE-EVQPLCENPGSNDKIE 300
           TPK  TP+ P TE R+ DF P QESP    D+  QQ ++ H+E EVQ  CE     + ++
Sbjct: 242 TPKSATPEHPLTERRNSDFNPGQESPIACMDSSVQQPDMGHLEGEVQTECEQIDCQNILK 301

Query: 301 AENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDG----- 355
           AEN  + ++ +NDN  +  +++KWWD+ESQ +LD+QQL E L++C+EFL SQS       
Sbjct: 302 AENRVDEVLDHNDNHGE--EEAKWWDNESQFLLDSQQLVEGLSICDEFLQSQSPNREGHE 359

Query: 356 NANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQD 415
           N NDG    KP LSDYA LG+E LKKDLE+CQ LV DPANIELDTPP+F LSQLEF SQD
Sbjct: 360 NGNDGHVTSKPRLSDYANLGAEDLKKDLEDCQDLVLDPANIELDTPPDFRLSQLEFGSQD 419

Query: 416 SFIPFGGSKA 425
           SFI +GG + 
Sbjct: 420 SFIAWGGEQG 429

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099315|ref|XP_002311435.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222851255|gb|EEE88802.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 293/425 (68%), Positives = 334/425 (78%), Gaps = 7/425 (1%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAGP WLVD NR ATKIKSAS   + ERV WKS+P K CPNCHHVIDNSDV  EWPGLPR
Sbjct: 1   MAGP-WLVDGNRFATKIKSASSASNHERVAWKSDPCKTCPNCHHVIDNSDVVQEWPGLPR 59

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQEIIWHLLAKAG  G+  HPFI EFIPTV+ D GICYTHP+NLPGVKQDGS 
Sbjct: 60  GVKFDPSDQEIIWHLLAKAGNGGIKSHPFIKEFIPTVENDDGICYTHPKNLPGVKQDGSI 119

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF+RAIKAY+TGTRKRRKI GDD G+VRWHKTGRTKPV+LDGVQKGCKKIMVLY S V
Sbjct: 120 SHFFHRAIKAYNTGTRKRRKIQGDDSGDVRWHKTGRTKPVILDGVQKGCKKIMVLYTSTV 179

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
           RGGKAEKTNWVMHQYHLGT EDE+D +YV+SK+ YQQQ A  G+K E+D+ E   A++ K
Sbjct: 180 RGGKAEKTNWVMHQYHLGTGEDERDGEYVVSKVFYQQQAANKGEKTEEDLSEIANAVVAK 239

Query: 241 VDPVTPKLVTPDPPRTERHP---DFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSND 297
           VDPVTPK VTPDPPR ER     D G    +  T+ + +   + ++EE     E+P  ND
Sbjct: 240 VDPVTPKSVTPDPPRAERRCQDFDLGKESTNVCTEPYAEHPGVENLEEANLQHESPCYND 299

Query: 298 KIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDGNA 357
           +   ENH + MVG+NDN ++ G  +KWWDSESQ++LD+QQL E L+LC+EFL SQS    
Sbjct: 300 QPGMENHVDQMVGDNDNCAEEG--TKWWDSESQHLLDSQQLVEGLSLCDEFLQSQSPSRG 357

Query: 358 NDGT-SKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDS 416
             GT + GK GLSDYARLG EHLKKDLEECQ L  DPANIELDTPPEF LSQLEF SQDS
Sbjct: 358 GHGTGASGKSGLSDYARLGPEHLKKDLEECQNLELDPANIELDTPPEFRLSQLEFGSQDS 417

Query: 417 FIPFG 421
           F+ +G
Sbjct: 418 FMAWG 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111738|ref|XP_002315960.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222865000|gb|EEF02131.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 301/426 (70%), Positives = 334/426 (78%), Gaps = 9/426 (2%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAGP WLVD NR ATKIKSASG  + ERV+WKS+P K CPNCHHVIDNSDV  EWPGLPR
Sbjct: 1   MAGP-WLVDGNRFATKIKSASGASNLERVEWKSDPCKTCPNCHHVIDNSDVVQEWPGLPR 59

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQEIIWHLLAK    G+ PHPFI EFIPTVD D GICYTHPQNLPGVKQDGS 
Sbjct: 60  GVKFDPSDQEIIWHLLAKVSDGGIKPHPFIKEFIPTVDNDDGICYTHPQNLPGVKQDGSI 119

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF+RAIKAY+TGTRKRRKI GD+FG+VRWHKTGRTKPV+LDG+QKGCKKIMVLYMS V
Sbjct: 120 SHFFHRAIKAYNTGTRKRRKIQGDNFGDVRWHKTGRTKPVILDGIQKGCKKIMVLYMSTV 179

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
           RGGKAEKTNWVMHQYHLGT EDE+D +YV+SKI Y QQQA  G+K E+D+ E    ++ K
Sbjct: 180 RGGKAEKTNWVMHQYHLGTSEDERDGEYVVSKIFY-QQQANKGEKPEEDLSEIVDDVVAK 238

Query: 241 VDPVTPKLVTPDPPRTERH-PDFGPRQESP--TTDAFDQQSEIRHV-EEVQPLCENPGSN 296
           VDPVTPK VTPDPPR ER   DF   QES    TD   QQ  I  + EEV  L +N    
Sbjct: 239 VDPVTPKSVTPDPPRAERRCQDFEMGQESTNICTDPCAQQPGIECLEEEVNLLQKNLSYV 298

Query: 297 DKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSDGN 356
           D++E EN+ N MVG+NDN   AG++ KWWDSESQ +LD+QQL E L+LC EFL SQS   
Sbjct: 299 DQLETENNVNHMVGDNDNC--AGEERKWWDSESQQLLDSQQLVEGLSLCAEFLQSQSPDR 356

Query: 357 ANDGT-SKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQD 415
              GT + GK GLSDYA LG E+LKKDLEECQ L  D ANIELDTPPEF LSQLEF SQD
Sbjct: 357 GGHGTEANGKTGLSDYALLGPEYLKKDLEECQNLELDQANIELDTPPEFRLSQLEFGSQD 416

Query: 416 SFIPFG 421
           SF  +G
Sbjct: 417 SFTAWG 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566843|ref|XP_002524405.1| conserved hypothetical protein [Ricinus communis] gi|223536366|gb|EEF38016.1| conserved hypothetical protein [Ricinus communis]

 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 284/435 (65%), Positives = 336/435 (77%), Gaps = 22/435 (5%)

Query: 4   PSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVK 63
           PSWLVD NR ATKIKSA+   +PE+V W+SNP+K CP C HVIDN+DV  +WPGLP+GVK
Sbjct: 44  PSWLVDGNRFATKIKSAA---NPEKVIWQSNPSKPCPKCQHVIDNADVTQQWPGLPKGVK 100

Query: 64  FDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHF 123
           FDP+DQEIIWHLLAK G  G  PHPFI+EFIPTV++D GICYTHPQNLPGV+QDGS +HF
Sbjct: 101 FDPTDQEIIWHLLAKVGAGGFEPHPFINEFIPTVNKDDGICYTHPQNLPGVRQDGSVSHF 160

Query: 124 FYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGG 183
           F+RAIKAY+TGTRKRRKI GDD G+VRWHKTGR KPV+LDGVQ+GCKKIMVLYMS VRGG
Sbjct: 161 FHRAIKAYNTGTRKRRKIQGDDLGDVRWHKTGRNKPVLLDGVQRGCKKIMVLYMSTVRGG 220

Query: 184 KAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPKVDP 243
           KAEKTNWVMHQYHLGT +DE++ DYV+SKI YQQQ    GDK E D+ E+   +I KVDP
Sbjct: 221 KAEKTNWVMHQYHLGTGDDEREGDYVVSKIFYQQQHINKGDKTEDDLFENIDPVIAKVDP 280

Query: 244 VTPKLVTPDPPRTERH-PDFGPRQESPTTDAFD-------QQSEIRHVE-EVQPLCENPG 294
           VTP  VTP+PP  ER  PD         TD +D       +   + H E +VQP  ENP 
Sbjct: 281 VTPVSVTPEPPSIERRCPDL-----DLDTDIYDIPFFFFLKHPGMEHAEIQVQPERENPS 335

Query: 295 SNDKIEAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQSD 354
            +D+++ EN  N M+ NND+  +  ++ KWWDSESQN+LD+QQL EAL+LC+EFL SQS 
Sbjct: 336 YDDQLKTEN-TNEMMENNDDCVE--ENQKWWDSESQNLLDSQQLVEALSLCDEFLQSQSP 392

Query: 355 GN--ANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFN 412
               + +G + GKP L+DYARLG E LKKDLEECQ LV DPANIELDTPP+F LSQLEF 
Sbjct: 393 NRYESGNGRANGKPCLADYARLGPEDLKKDLEECQNLVLDPANIELDTPPDFRLSQLEFG 452

Query: 413 SQDSFIPFGGSKAIN 427
           SQ+SFI +GG K I+
Sbjct: 453 SQESFIAWGGGKTID 467

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357488265|ref|XP_003614420.1| NAC domain-containing protein [Medicago truncatula] gi|355515755|gb|AES97378.1| NAC domain-containing protein [Medicago truncatula]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/447 (63%), Positives = 334/447 (74%), Gaps = 24/447 (5%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAGPSWLVD +RIATKIKSASG  DPE V WKSNPTKACPNC H IDNSDV  EWPGLP+
Sbjct: 1   MAGPSWLVDKSRIATKIKSASGACDPENVTWKSNPTKACPNCQHTIDNSDVVKEWPGLPK 60

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQE+IWHLLAK G+    PHPF+DEFI T++ + GICYTHPQNLPGVKQDG+A
Sbjct: 61  GVKFDPSDQEVIWHLLAKCGVGNSKPHPFVDEFIITLEVNDGICYTHPQNLPGVKQDGNA 120

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF+RAIKAY+TGTRKRRKI+  DFG+VRWHKTGRTKPV+L+GVQKGCKKIMVLYMS  
Sbjct: 121 SHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGVQKGCKKIMVLYMSSA 180

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
            GGKAEKTNWVMHQYHLGTEEDEKD ++VISK+ YQQQQ K GDK EQDI E+  A I K
Sbjct: 181 GGGKAEKTNWVMHQYHLGTEEDEKDGEFVISKVFYQQQQVKLGDKDEQDIPEAIEATIAK 240

Query: 241 VDPVTPKLVTPDPPRTER-HPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKI 299
           VDPVTPK VTP+PP TER + D    Q++P   A  Q  ++  ++E+QP CE    +D  
Sbjct: 241 VDPVTPKSVTPEPPYTERLYSDVDLGQDTP---AIPQPPQMNCLDEIQPYCEEQAKDDLS 297

Query: 300 EAENHANVMVGNNDNGSQAG---------------DDSKWWDSESQNILDTQQLAEALTL 344
             E   N    NN+N +  G               +  KWWDSESQN+LD+QQL +AL+L
Sbjct: 298 MVETERNEGKDNNENNADDGQKWCEGTDNNENNADEGQKWWDSESQNLLDSQQLVDALSL 357

Query: 345 CEEFLNSQS-DGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIEL----D 399
           C++ L SQS   +  D   K +P LS YA+LG EHLKKD+E+CQ LV +P+N+E     D
Sbjct: 358 CDDLLRSQSPTRDGKDEEQKNQPSLSIYAQLGPEHLKKDIEDCQNLVLEPSNVESNVEND 417

Query: 400 TPPEFGLSQLEFNSQDSFIPFGGSKAI 426
           TP EF LSQLEF SQDSFI FG +K +
Sbjct: 418 TPSEFRLSQLEFGSQDSFIAFGYNKVV 444

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502202|gb|AFK39167.1| unknown [Medicago truncatula]

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 284/447 (63%), Positives = 334/447 (74%), Gaps = 24/447 (5%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAGPSWLVD +RIATKIKSASG  DPE V WKSNPTKACPNC H IDNSDV  EWPGLP+
Sbjct: 1   MAGPSWLVDKSRIATKIKSASGACDPENVTWKSNPTKACPNCQHTIDNSDVVKEWPGLPK 60

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQE+IWHLLAK G+    PHPF+DEFI T++ + GICYTHPQNLPGVKQDG+A
Sbjct: 61  GVKFDPSDQEVIWHLLAKCGVGNSKPHPFVDEFIITLEVNDGICYTHPQNLPGVKQDGNA 120

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF+RAIKAY+TGTRKRRKI+  DFG+VRWHKTGRTKPV+L+GVQKGCKKI+VLYMS  
Sbjct: 121 SHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGVQKGCKKIVVLYMSSA 180

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
            GGKAEKTNWVMHQYHLGTEEDEKD ++VISK+ YQQQQ K GDK EQDI E+  A I K
Sbjct: 181 GGGKAEKTNWVMHQYHLGTEEDEKDGEFVISKVFYQQQQVKLGDKDEQDIPEAIEATIAK 240

Query: 241 VDPVTPKLVTPDPPRTER-HPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKI 299
           VDPVTPK VTP+PP TER + D    Q++P   A  Q  ++  ++E+QP CE    +D  
Sbjct: 241 VDPVTPKSVTPEPPYTERLYSDVDLGQDTP---AIPQPPQMNCLDEIQPYCEEQAKDDLS 297

Query: 300 EAENHANVMVGNNDNGSQAG---------------DDSKWWDSESQNILDTQQLAEALTL 344
             E   N    NN+N +  G               +  KWWDSESQN+LD+QQL +AL+L
Sbjct: 298 MVETERNEGKDNNENNADDGQKWCEGTDNNENNADEGQKWWDSESQNLLDSQQLVDALSL 357

Query: 345 CEEFLNSQS-DGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIEL----D 399
           C++ L SQS   +  D   K +P LS YA+LG EHLKKD+E+CQ LV +P+N+E     D
Sbjct: 358 CDDLLRSQSPTRDGKDEEQKNQPSLSIYAQLGPEHLKKDIEDCQNLVLEPSNVESNVEND 417

Query: 400 TPPEFGLSQLEFNSQDSFIPFGGSKAI 426
           TP EF LSQLEF SQDSFI FG +K +
Sbjct: 418 TPSEFRLSQLEFGSQDSFIAFGYNKVV 444

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357488267|ref|XP_003614421.1| NAC domain-containing protein [Medicago truncatula] gi|355515756|gb|AES97379.1| NAC domain-containing protein [Medicago truncatula]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 283/447 (63%), Positives = 332/447 (74%), Gaps = 27/447 (6%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAGPSWLVD +RIATKIKSASG  DPE V WKSNPTKACPNC H IDNSDV  EWPGLP+
Sbjct: 1   MAGPSWLVDKSRIATKIKSASGACDPENVTWKSNPTKACPNCQHTIDNSDVVKEWPGLPK 60

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQE+IWHLLAK G+    PHPF+DEFI T++ + GICYTHPQNLPGVKQDG+A
Sbjct: 61  GVKFDPSDQEVIWHLLAKCGVGNSKPHPFVDEFIITLEVNDGICYTHPQNLPGVKQDGNA 120

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF+RAIKAY+TGTRKRRKI+  DFG+VRWHKTGRTKPV+L+GVQKGCKKIMVLYMS  
Sbjct: 121 SHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGVQKGCKKIMVLYMSSA 180

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
            GGKAEKTNWVMHQYHLGTEEDEKD ++VISK+ YQQQQ K GDK EQDI E+  A I K
Sbjct: 181 GGGKAEKTNWVMHQYHLGTEEDEKDGEFVISKVFYQQQQVKLGDKDEQDIPEAIEATIAK 240

Query: 241 VDPVTPKLVTPDPPRTER-HPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKI 299
           VDPVTPK VTP+PP TER + D    Q++P         ++  ++E+QP CE    +D  
Sbjct: 241 VDPVTPKSVTPEPPYTERLYSDVDLGQDTPAI------PQMNCLDEIQPYCEEQAKDDLS 294

Query: 300 EAENHANVMVGNNDNGSQAG---------------DDSKWWDSESQNILDTQQLAEALTL 344
             E   N    NN+N +  G               +  KWWDSESQN+LD+QQL +AL+L
Sbjct: 295 MVETERNEGKDNNENNADDGQKWCEGTDNNENNADEGQKWWDSESQNLLDSQQLVDALSL 354

Query: 345 CEEFLNSQS-DGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIEL----D 399
           C++ L SQS   +  D   K +P LS YA+LG EHLKKD+E+CQ LV +P+N+E     D
Sbjct: 355 CDDLLRSQSPTRDGKDEEQKNQPSLSIYAQLGPEHLKKDIEDCQNLVLEPSNVESNVEND 414

Query: 400 TPPEFGLSQLEFNSQDSFIPFGGSKAI 426
           TP EF LSQLEF SQDSFI FG +K +
Sbjct: 415 TPSEFRLSQLEFGSQDSFIAFGYNKVV 441

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493468|ref|XP_004159303.1| PREDICTED: NAC domain-containing protein 8-like [Cucumis sativus]

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 283/429 (65%), Positives = 330/429 (76%), Gaps = 15/429 (3%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MA PSWLVDSNRIATKIKSASGT +P  V+WKSNP+K+CPNC H IDNSDV  EWPGLPR
Sbjct: 1   MARPSWLVDSNRIATKIKSASGTNNPRSVEWKSNPSKSCPNCQHTIDNSDVVQEWPGLPR 60

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQEIIWHLLAK G+ G  PHPFIDEFIPTV +D GICYTHPQ LPGVKQDGS 
Sbjct: 61  GVKFDPSDQEIIWHLLAKVGIGGSRPHPFIDEFIPTVFEDDGICYTHPQKLPGVKQDGSV 120

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF+RAIKAY+TGTRKRRKI  DDFG+VRWHKTGRTKPV++DGVQKGCKKIMVLYMS  
Sbjct: 121 SHFFHRAIKAYNTGTRKRRKITDDDFGDVRWHKTGRTKPVVIDGVQKGCKKIMVLYMSFA 180

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
           +GG+AEKTNWVMHQYHLGTEEDE+D +YVISKI +QQQ  K G+ IEQ+  E    I  K
Sbjct: 181 KGGRAEKTNWVMHQYHLGTEEDERDGEYVISKIFHQQQNVKQGEVIEQEAPEIIDTI--K 238

Query: 241 VDPVTPKLVTPDPPRTE-RHPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKI 299
           VDP TPK  TP+PPR E R  +  P Q+S  T           + EV P  E    ++ I
Sbjct: 239 VDPHTPKSATPEPPRVEIRCVNIDPEQDSVITST-------SVLVEVPPEFEKSEKHNMI 291

Query: 300 EAENHANVMVGNNDNGSQAGDDSKWWDSESQNILDTQQLAEALTLCEEFLNSQS---DGN 356
           + + +++ ++ +NDN  +  ++ KWW+ ESQNILD+QQL EAL+LC++ L SQS   DGN
Sbjct: 292 KPDGYSDEVIDDNDNHIE--EEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGN 349

Query: 357 ANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDS 416
            N G S  K   S+YA+LG E LKKDLEECQ LV DPANIELDTPPEF LSQL+F SQ+S
Sbjct: 350 FNHGASGSKSCFSEYAKLGPEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQES 409

Query: 417 FIPFGGSKA 425
           F+ +GG  A
Sbjct: 410 FLAWGGKTA 418

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074036|gb|ACJ85378.1| unknown [Medicago truncatula]

 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 282/442 (63%), Positives = 330/442 (74%), Gaps = 24/442 (5%)

Query: 1   MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
           MAGPSWLVD +RIATKIKSASG  DPE V WKSNPTKACPNC H IDNSDV  EWPGLP+
Sbjct: 1   MAGPSWLVDKSRIATKIKSASGACDPENVTWKSNPTKACPNCQHTIDNSDVVKEWPGLPK 60

Query: 61  GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
           GVKFDPSDQE+IWHLLAK G+    PHPF+DEFI T++ + GICYTHPQNLPGVKQDG+A
Sbjct: 61  GVKFDPSDQEVIWHLLAKCGVGNSKPHPFVDEFIITLEVNDGICYTHPQNLPGVKQDGNA 120

Query: 121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
           +HFF+RAIKAY+TGTRKRRKI+  DFG+VRWHKTGRTKPV+L+GVQKGCKKI+VLYMS  
Sbjct: 121 SHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGVQKGCKKIVVLYMSSA 180

Query: 181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK 240
            GGKAEKTNWVMHQYHLGTEEDEKD ++VISK+ YQQQQ K GDK EQDI E+  A I K
Sbjct: 181 GGGKAEKTNWVMHQYHLGTEEDEKDGEFVISKVFYQQQQVKLGDKDEQDIPEAIEATIAK 240

Query: 241 VDPVTPKLVTPDPPRTER-HPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKI 299
           VDP TPK VTP+PP TER + D    Q++P   A  Q  ++  ++E+QP CE    +D  
Sbjct: 241 VDPGTPKSVTPEPPYTERLYSDVDLGQDTP---AIPQPPQMNCLDEIQPYCEEQAKDDLS 297

Query: 300 EAENHANVMVGNNDNGSQAG---------------DDSKWWDSESQNILDTQQLAEALTL 344
             E   N    NN+N +  G               +  KWWDSESQN+LD+QQL +AL+L
Sbjct: 298 MVETERNEGKDNNENNADDGQKWCEGTDNNENNADEGQKWWDSESQNLLDSQQLVDALSL 357

Query: 345 CEEFLNSQS-DGNANDGTSKGKPGLSDYARLGSEHLKKDLEECQMLVHDPANIEL----D 399
           C++ L SQS   +  D   K +P LS YA+LG EHLKKD+E+CQ LV +P+N+E     D
Sbjct: 358 CDDLLRSQSPTRDGKDEEQKNQPSLSIYAQLGPEHLKKDIEDCQNLVLEPSNVESNVEND 417

Query: 400 TPPEFGLSQLEFNSQDSFIPFG 421
           TP EF LSQLEF SQDSFI FG
Sbjct: 418 TPSEFRLSQLEFGSQDSFIAFG 439

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	427
TAIR|locus:2031170	449	SOG1 "SUPPRESSOR OF GAMMA RADI	0.740	0.703	0.611	2.1e-141
TAIR|locus:2084148	370	NAC044 "NAC domain containing	0.564	0.651	0.535	5.4e-67
TAIR|locus:2145743	350	NAC085 "NAC domain containing	0.555	0.677	0.522	3.4e-61
TAIR|locus:2118264	498	NAC075 "NAC domain containing	0.423	0.363	0.567	2.8e-57
TAIR|locus:2121387	305	NAC073 "NAC domain containing	0.519	0.727	0.486	1.4e-55
TAIR|locus:2032580	314	NAC010 "NAC domain containing	0.503	0.684	0.509	2.9e-55
TAIR|locus:2165031	386	NAC099 "NAC domain containing	0.686	0.759	0.416	1.9e-53
TAIR|locus:2204783	359	NAC004 "NAC domain containing	0.400	0.476	0.288	1.6e-12
TAIR|locus:2089205	303	AT3G12910 [Arabidopsis thalian	0.306	0.432	0.337	2.6e-11
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.348	0.474	0.309	7e-11

TAIR|locus:2031170 SOG1 "SUPPRESSOR OF GAMMA RADIATION 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1049 (374.3 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
 Identities = 208/340 (61%), Positives = 246/340 (72%)

Query:     1 MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPR 60
             MAG SWL+DSNRIATKI SAS + DP +V WKSNP++ CP C HVIDNSDV  +WPGLPR
Sbjct:     1 MAGRSWLIDSNRIATKIMSASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPR 60

Query:    61 GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
             GVKFDPSD EIIWHLLAK+GL GL+ HPFIDEFIPTV+QD GICYTHP+NLPGVK DG+ 
Sbjct:    61 GVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTV 120

Query:   121 AHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMV 180
             +HFF++AIKAYSTGTRKRRKI+ DDFG+VRWHKTGRTKPV+LDGVQ+GCKKIMVLY    
Sbjct:   121 SHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLY---- 176

Query:   181 RGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQ---AKYGDKIEQDILEST-GA 236
              GGKA KTNWVMHQYHLG EEDEK+ DYV+SKI YQQ Q    K GDK EQ++ E    A
Sbjct:   177 -GGKAVKTNWVMHQYHLGIEEDEKEGDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAA 235

Query:   237 IIPKVDPVTPKLVTPDPPRTER-----H--PDFGPRQE--SPTTDAFDQQSEIR----HV 283
             + P  DPVTPKL TP+P    R     H   D+    +  S    +  + SE+      V
Sbjct:   236 VTPTADPVTPKLATPEPRNAVRICSDSHIASDYVTPSDYVSAHEVSLAETSEVMCMEDEV 295

Query:   284 EEVQPLCENPGSNDKIE--AENHANVMVGNNDNGSQAGDD 321
             + +QP  E P S  ++E   EN A  M+ + +   +  D+
Sbjct:   296 QSIQPNHERPSSGPELEHGLENGAKEMLDDKEEQEKDRDN 335

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000077 "DNA damage checkpoint" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0010332 "response to gamma radiation" evidence=IMP

TAIR|locus:2084148 NAC044 "NAC domain containing protein 44" [Arabidopsis thaliana (taxid:3702)]

 Score = 658 (236.7 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
 Identities = 135/252 (53%), Positives = 171/252 (67%)

Query:     5 SWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKF 64
             +W+VD   IA K+K+AS      +++      K CPNC + IDNS+V   WPGLP+GVKF
Sbjct:     4 AWIVDGRGIAAKVKNAS-LSSALQIQDCGAHIK-CPNCTYRIDNSNVLIPWPGLPKGVKF 61

Query:    65 DPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFF 124
             +P+D++II  L AK G+ G  PH  I+EFI  V +D GI YTHPQNLPG  +DG +  FF
Sbjct:    62 EPTDEDIIEFLEAKCGIGGSEPHVLIEEFIRPVTEDVGINYTHPQNLPGANKDGVSVFFF 121

Query:   125 YRAIKAYSTGTRKRRKINGDDFGE--VRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRG 182
             ++ ++AY TG RKRRKI      +  VRWHKTGRTKPVML GVQ+GCKKIMVLY S  +G
Sbjct:   122 HKTVQAYGTGQRKRRKITPTLVNDEPVRWHKTGRTKPVMLSGVQRGCKKIMVLYKSARKG 181

Query:   183 GKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPKVD 242
              K EK+NWV+HQYHLGTE  E   DYV+SKI+YQQQ  K G+  ++   ES+  +  +  
Sbjct:   182 TKPEKSNWVLHQYHLGTEGKEIG-DYVVSKITYQQQ--KLGENPDEG--ESSSGV--RGG 234

Query:   243 PVTPKLVTPDPP 254
             P TPK  TP PP
Sbjct:   235 PTTPKTNTPTPP 246

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2145743 NAC085 "NAC domain containing protein 85" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 128/245 (52%), Positives = 164/245 (66%)

Query:     5 SWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKF 64
             +W+VD   I+  +K+AS      ++K        C NC + IDNS+V   WPGLP+GVKF
Sbjct:     7 TWIVDGPWISRNVKNAS-LSSALQIK-DCGAYINCFNCSYRIDNSNVLTPWPGLPKGVKF 64

Query:    65 DPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFF 124
             +P+D+E+I HL AK G++GL PH  I +FI +V QD GI YTHPQNLPGV +DG++  FF
Sbjct:    65 EPTDEEVIEHLEAKCGIDGLKPHLLIQDFICSVTQDVGINYTHPQNLPGVSKDGTSVFFF 124

Query:   125 YRAIKAYSTGTRKRRKINGDDFGE--VRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRG 182
              +   AY  G RKRR+I      +  VRWHKTG+TKPVML+G+QKGCKKIMVLY S  +G
Sbjct:   125 NKTAHAYQNGQRKRRRITPTSLKDDTVRWHKTGQTKPVMLNGIQKGCKKIMVLYKSARKG 184

Query:   183 GKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQ--QQAKYGDKIEQDILESTGAIIPK 240
              K EK+NWV+HQYHLGTEE E   +YV+SKI+YQQ  QQ K  D+ E   +   G   PK
Sbjct:   185 FKPEKSNWVLHQYHLGTEEGEIG-EYVVSKITYQQPKQQEKTIDESESSGVRG-GPSTPK 242

Query:   241 VDPVT 245
                +T
Sbjct:   243 TSTIT 247

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2118264 NAC075 "NAC domain containing protein 75" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 109/192 (56%), Positives = 137/192 (71%)

Query:    36 TKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIP 95
             +K CP+C H ++      +W GLP GVKFDP+DQE+I HL AK   +    HP IDEFIP
Sbjct:    28 SKKCPSCGHKLEGKP--QDWVGLPAGVKFDPTDQELIEHLEAKVLAKDFKSHPLIDEFIP 85

Query:    96 TVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGD---------DF 146
             T++ + GICYTHP+ LPGV +DG + HFF+R  KAY+TGTRKRRKI  +           
Sbjct:    86 TIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDNNLQGSSSS 145

Query:   147 GEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDR 206
             GE RWHKTG+T+PVM++G QKGCKKI+VLY +  +  K EKTNWVMHQYHLGT E+EK+ 
Sbjct:   146 GETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGTHEEEKEG 205

Query:   207 DYVISKISYQQQ 218
             + V+SKI YQ Q
Sbjct:   206 ELVVSKIFYQTQ 217

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2121387 NAC073 "NAC domain containing protein 73" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 111/228 (48%), Positives = 148/228 (64%)

Query:     5 SWLVDSNRIAT--KIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVA--HEWPGLPR 60
             +W  D + + T  +I  + G  +        +  K CP+C H     + A  H+ PGLP 
Sbjct:     2 TWCNDRSDVQTVERIIPSPGAAESPVASLPVSCHKTCPSCGHNFKFHEQAGIHDLPGLPA 61

Query:    61 GVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSA 120
             GVKFDP+DQE++ HL  K   +    HP IDEFI T+D + GICYTHP+ LPGV +DG+ 
Sbjct:    62 GVKFDPTDQEVLEHLEGKVRDDAKKLHPLIDEFIRTIDGENGICYTHPEKLPGVNKDGTV 121

Query:   121 AHFFYRAIKAYSTGTRKRRKINGD-DFG-EVRWHKTGRTKPVMLDGVQKGCKKIMVLYMS 178
              HFF+R  KAY+TGTRKRRK++ D D G E RWHKTG+T+PV+  G  +G KKI+VLY +
Sbjct:   122 RHFFHRPSKAYTTGTRKRRKVHTDSDVGGETRWHKTGKTRPVLAGGRVRGYKKILVLYTN 181

Query:   179 MVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKI 226
               +  K EKTNWVMHQYHLGT E+EK+ + V+SK+ YQ Q  + G  +
Sbjct:   182 YGKQKKPEKTNWVMHQYHLGTSEEEKEGELVVSKVFYQTQPRQCGGSV 229

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2032580 NAC010 "NAC domain containing protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 113/222 (50%), Positives = 142/222 (63%)

Query:     9 DSNRIATKIKSASG-TGDPERVKWKSNPTKACPNC-----HHVIDNSDVAHEWPGLPRGV 62
             D   +  K +S S  T  P+       P   CP+C     HH  D      + P LP GV
Sbjct:    22 DHPSVQLKDQSQSCVTSRPDSKISAETPITTCPSCGHKLHHHQDDQVGSIKDLPSLPAGV 81

Query:    63 KFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAH 122
             KFDPSD+EI+ HL AK   +    HP IDEFIPT++ + GICYTHP+ LPGV +DG   H
Sbjct:    82 KFDPSDKEILMHLEAKVSSDKRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRH 141

Query:   123 FFYRAIKAYSTGTRKRRKINGDDFG-EVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVR 181
             FF+R  KAY+TGTRKRRK++ D+ G E RWHKTG+T+PV+    + G KKI+VLY +  R
Sbjct:   142 FFHRPSKAYTTGTRKRRKVSTDEEGHETRWHKTGKTRPVLSQSGETGFKKILVLYTNYGR 201

Query:   182 GGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYG 223
               K EKTNWVMHQYHLG+ EDEKD + V+SK+ YQ Q  + G
Sbjct:   202 QKKPEKTNWVMHQYHLGSSEDEKDGEPVLSKVFYQTQPRQCG 243

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2165031 NAC099 "NAC domain containing protein 99" [Arabidopsis thaliana (taxid:3702)]

 Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
 Identities = 134/322 (41%), Positives = 181/322 (56%)

Query:    36 TKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIIWHLLAKA-GLEG----LNPHPFI 90
             +K CP C  +I  +   + W GLP GVKFDP+DQE+I HL AK  G E      + HP I
Sbjct:    22 SKHCPGCGRMIQAATKPN-WVGLPAGVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPLI 80

Query:    91 DEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDF---- 146
             DEFIPT+D + GICYTHPQ LPGV +DG + HFF++  +AY+TGTRKRRKI   D     
Sbjct:    81 DEFIPTIDGEDGICYTHPQKLPGVTRDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDSEL 140

Query:   147 ---GEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEEDE 203
                 E RWHKTG+T+PVM++G Q+GCKKI+VLY +  +  + EKTNWVMHQYHLG  E+E
Sbjct:   141 TGSSETRWHKTGKTRPVMINGQQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEEE 200

Query:   204 KDRDYVISKISYQQQ------QAKYGDKI-EQDILE-STGAIIPKVDPVTPKLVTPDP-P 254
             ++ + V+SKI YQ Q         + D    +D++    G  I  V      L + D   
Sbjct:   201 REGELVVSKIFYQTQPRQCVSNTNWSDHHGSKDVIGIGVGDEISSVAATLQSLGSGDVVS 260

Query:   255 RTERHPDFGPRQESPTTDAFDQQSEIRHVEEVQPLCENPGSNDKIEAENHANVMVGNNDN 314
             R   HP      E  T +A    S+ R  + V   CE    +  I +   ++ M+ ++ N
Sbjct:   261 RVNMHPHTRSFDEG-TAEA----SKGRENQHVSGTCEEV-HDGIITSSMSSHHMIHDHHN 314

Query:   315 GS-QAGDDSKWWDSESQNILDT 335
                Q GD  ++  S S  +  T
Sbjct:   315 QHHQIGDRREFHMSSSYPMTPT 336

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2204783 NAC004 "NAC domain containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 54/187 (28%), Positives = 88/187 (47%)

Query:    59 PRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG---VK 115
             P G +F P+D+EI+ H L    L+    H  +DE I TVD    IC   P +LP    +K
Sbjct:     4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSH--VDEVISTVD----ICSFEPWDLPSKSMIK 57

Query:   116 QDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVL 175
                   +FF      Y+ G ++RR+ N   F    W KTG+T  VM     +  +KI   
Sbjct:    58 SRDGVWYFFSVKEMKYNRGDQQRRRTNSG-F----WKKTGKTMTVMRKRGNR--EKIGEK 110

Query:   176 YMSMVRGGKAEKTNWVMHQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTG 235
              + + +     KT+WVMH+YH  +    +   Y + K+ ++ ++ +         +E   
Sbjct:   111 RVLVFKNRDGSKTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQIH 170

Query:   236 AIIPKVD 242
             ++IP V+
Sbjct:   171 SLIPLVN 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2089205 AT3G12910 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 50/148 (33%), Positives = 72/148 (48%)

Query:    58 LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
             LP G +F P+D+E++ + L+K  L  L     IDE +  +D    I    P +LP  +  
Sbjct:    22 LP-GFRFHPTDEELVGYYLSKKVL--LKKTSKIDEIVSQID----IYKFDPWDLPRSRNT 74

Query:   118 GSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQK---GCKKIMV 174
                ++FF +  + Y    R  R + G  F    W  TG  KPV  DG  K   G KK +V
Sbjct:    75 EKESYFFCKRGRKYRNSIRPNR-VTGSGF----WKATGIDKPVYSDGSNKAVIGLKKTLV 129

Query:   175 LYMSMVRGGKAEKTNWVMHQYHLGTEED 202
              Y+     GK  KT+W+MH++ L T  D
Sbjct:   130 YYLGSA--GKGNKTDWMMHEFRLPTAND 155

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 7.0e-11, P = 7.0e-11
 Identities = 52/168 (30%), Positives = 80/168 (47%)

Query:    58 LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
             LP G +F P+D+E+I H L +     ++   F  + +  VD D   C   P +LP     
Sbjct:     5 LPPGFRFHPTDEELITHYLCRK----VSDIGFTGKAV--VDVDLNKC--EPWDLPAKASM 56

Query:   118 GSAA-HFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLY 176
             G    +FF +  + Y TG R  R     + G   W  TG+ K +   GV  G KK +V Y
Sbjct:    57 GEKEWYFFSQRDRKYPTGLRTNR---ATEAGY--WKTTGKDKEIYRSGVLVGMKKTLVFY 111

Query:   177 MSMVRGGKAEKTNWVMHQYHLGTEED---EKDRDYVISKISYQQQQAK 221
                 R  K EK+NWVMH+Y L +++        ++V+ ++  +   AK
Sbjct:   112 KG--RAPKGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAK 157

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NQK2	NAC8_ARATH	No assigned EC number	0.5982	0.9836	0.9354	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	427
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-40

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  140 bits (356), Expect = 1e-40
 Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 17/144 (11%)

Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG--VK 115
           LP G +F P+D+E++ + L K  + G      + + IP VD    I    P +LP    K
Sbjct: 1   LPPGFRFHPTDEELVVYYL-KRKVLGKPLP--LLDVIPEVD----IYKFEPWDLPDGKAK 53

Query: 116 QDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVML-DGVQKGCKKIMV 174
                 +FF    + Y  G+R  R           W  TG+ KPV+   G   G KK +V
Sbjct: 54  GGDREWYFFSPRDRKYPNGSRTNRATGS-----GYWKATGKDKPVLSKGGEVVGMKKTLV 108

Query: 175 LYMSMVRGGKAEKTNWVMHQYHLG 198
            Y    R  K EKT+WVMH+Y L 
Sbjct: 109 FYK--GRAPKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	427
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=6.3e-39  Score=280.14  Aligned_cols=127  Identities=37%  Similarity=0.607  Sum_probs=90.3

Q ss_pred             CCCCceeCCChHHHHHHHHHhhhcCCCCCCCcccccccccccCCCCCCCCCCCCCC-CCCCCCceEEEEecccccCCCCc
Q 014310           58 LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPG-VKQDGSAAHFFYRAIKAYSTGTR  136 (427)
Q Consensus        58 LPpGfRF~PTDeELI~hYL~kKi~G~~~p~Pli~~~Ip~vD~d~~Iy~~ePwdLPg-~~~dG~~wYFFs~r~kky~~G~R  136 (427)
                      |||||||+|||+|||.+||++|+.|.+.+   ...+|+++|    ||+.|||+||. ....++.||||+++.+++.+|.|
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~---~~~~i~~~D----iy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r   73 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLP---CEDVIHDVD----IYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGR   73 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHC---S-CHSEE------GGGS-GGGCHHHSSS-SSEEEEEEE----------
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCC---cccceeecc----cCccChHHhhhhccCCCceEEEEEecccccCCccc
Confidence            89999999999999999999999998532   126788887    99999999994 23456799999999999999999


Q ss_pred             cceeccCCCCCccEEeecCCCceeee-CCeeeEEEEEEEeeeeccCCCCCCCcCeEEEEEEeC
Q 014310          137 KRRKINGDDFGEVRWHKTGRTKPVML-DGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLG  198 (427)
Q Consensus       137 ~rR~~~~G~~g~G~Wk~tGk~K~I~~-~G~vVG~KKtLvFY~gr~~g~kg~KT~WVMHEY~L~  198 (427)
                      ++|++.     +|+||.+|+.++|.. +|.+||+||+|+||.++.  +++.+|+|+||||+|.
T Consensus        74 ~~R~~~-----~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~--~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   74 PNRVTG-----GGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKS--PNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             S-EEET-----TEEEEEECEEEEEEE-TTCEEEEEEEEEEEESST--TS-EEEEEEEEEEEE-
T ss_pred             cccccc-----ceEEeecccccccccccceeeeeEEEEEEEeccC--CCCCcCCeEEEEEEeC
Confidence            999774     479999999999998 899999999999997753  5778999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	427
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		1e-08
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		4e-08
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		4e-08

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D E++ H L +       P P I E    VD    +    P +LP     
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAE----VD----LYKFDPWDLPERALF 66
Query: 118 GSAAHFFYRAI-KAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLY 176
           G+   +F+    + Y  G+R  R       G   W  TG  KPV   G   G KK +V Y
Sbjct: 67  GAREWYFFTPRDRKYPNGSRPNRAA-----GNGYWKATGADKPVAPRGRTLGIKKALVFY 121
Query: 177 MSMVRGGKAEKTNWVMHQYHL 197
               +  +  KT+W+MH+Y L
Sbjct: 122 AG--KAPRGVKTDWIMHEYRL 140

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D+E++   L +        + F  + I  +D    +    P  LP     
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAG----YDFSLQLIAEID----LYKFDPWVLPNKALF 68
Query: 118 GSAAHFFYRAI-KAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLY 176
           G    +F+    + Y  G+R  R + G  +    W  TG  K +  +G + G KK +V Y
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNR-VAGSGY----WKATGTDKIISTEGQRVGIKKALVFY 123
Query: 177 MSMVRGGKAEKTNWVMHQYHL----GTEEDEKDRDYVISKISYQQQQAK 221
           +   +  K  KTNW+MH+Y L          K  D+V+ +I  +Q  A+
Sbjct: 124 IG--KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 170

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D+E++   L +        + F  + I  +D    +    P  LP     
Sbjct: 20  LPPGFRFYPTDEELMVQYLCRKAAG----YDFSLQLIAEID----LYKFDPWVLPNKALF 71
Query: 118 GSAAHFFYRAI-KAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLY 176
           G    +F+    + Y  G+R  R + G  +    W  TG  K +  +G + G KK +V Y
Sbjct: 72  GEKEWYFFSPRDRKYPNGSRPNR-VAGSGY----WKATGTDKIISTEGQRVGIKKALVFY 126
Query: 177 MSMVRGGKAEKTNWVMHQYHL----GTEEDEKDRDYVISKISYQQQQAK 221
           +   +  K  KTNW+MH+Y L          K  D+V+ +I  +Q  A+
Sbjct: 127 IG--KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQ 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	427
1ut7_A	171	No apical meristem protein; transcription regulati	1e-19
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	9e-19
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score = 84.7 bits (210), Expect = 1e-19
 Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 24/163 (14%)

Query: 58  LPRGVKFDPSDQEIIWH-LLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQ 116
           LP G +F P+D+E++   L  KA       + F  + I  +D    +    P  LP    
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAG-----YDFSLQLIAEID----LYKFDPWVLPNKAL 67

Query: 117 DGSAA-HFFYRAIKAYSTGTRKRRKI-NGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMV 174
            G    +FF    + Y  G+R  R   +G       W  TG  K +  +G + G KK +V
Sbjct: 68  FGEKEWYFFSPRDRKYPNGSRPNRVAGSG------YWKATGTDKIISTEGQRVGIKKALV 121

Query: 175 LYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDR----DYVISKI 213
            Y+   +  K  KTNW+MH+Y L             D+V+ +I
Sbjct: 122 FYIG--KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRI 162

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 82.4 bits (204), Expect = 9e-19
 Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 29/168 (17%)

Query: 58  LPRGVKFDPSDQEIIWH-LLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGV-K 115
           LP G +F P+D E++ H L  KA              I  VD    +    P +LP    
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAG-----QRLPVPIIAEVD----LYKFDPWDLPERAL 65

Query: 116 QDGSAAHFFYRAIKAYSTGTRKRRKI-NGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMV 174
                 +FF    + Y  G+R  R   NG       W  TG  KPV   G   G KK +V
Sbjct: 66  FGAREWYFFTPRDRKYPNGSRPNRAAGNG------YWKATGADKPVAPRGRTLGIKKALV 119

Query: 175 LYMSMVRGGKAEKTNWVMHQYHLGTEEDEKDR---------DYVISKI 213
            Y    +  +  KT+W+MH+Y L                  D+V+ ++
Sbjct: 120 FYAG--KAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRL 165

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 43/281 (15%), Positives = 81/281 (28%), Gaps = 96/281 (34%)

Query: 193 HQYHLGTEEDEKDRDYVISKISYQQQQAKYGDKIEQDILESTGAIIPK--VDPVTPKLVT 250
           H +H+  E  E    Y    I    + A   +   +D+ +   +I+ K  +D +   +++
Sbjct: 3   HHHHMDFETGEHQYQY--KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI---IMS 57

Query: 251 PDP-PRTER---------------------HPDFG---------PRQESPTTDAFDQQSE 279
            D    T R                       ++           RQ S  T  + +Q +
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117

Query: 280 I----------RHVEEVQPLCENPGSNDKI-----EAENHANV----MVGN--------- 311
                       +V  +QP         K+     E     NV    ++G+         
Sbjct: 118 RLYNDNQVFAKYNVSRLQPY-------LKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

Query: 312 -NDNGSQAGDDSK-WWDSESQNILDTQQLAEALTLCEEF---LNSQSDGNAN--DGTSKG 364
                 Q   D K +W +          L     L  +      S+SD ++N        
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230

Query: 365 KPGLS------DYAR-L-------GSEHLKK-DLEECQMLV 390
           +  L        Y   L        ++     +L  C++L+
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL-SCKILL 270

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	427
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3e-51  Score=377.30  Aligned_cols=152  Identities=29%  Similarity=0.501  Sum_probs=129.9

Q ss_pred             CCCCCCCCCCceeCCChHHHHHHHHHhhhcCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCCC-CceEEEEecccc
Q 014310           52 AHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDG-SAAHFFYRAIKA  130 (427)
Q Consensus        52 ~~~~~~LPpGfRF~PTDeELI~hYL~kKi~G~~~p~Pli~~~Ip~vD~d~~Iy~~ePwdLPg~~~dG-~~wYFFs~r~kk  130 (427)
                      .+..++|||||||+|||||||.|||++|+.|.    +++..+|+++|    ||.+|||+||+.+..| .+||||+++.++
T Consensus         9 ~~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~----~~~~~~I~evD----vy~~~Pw~Lp~~~~~g~~ewYFFs~r~~k   80 (174)
T 3ulx_A            9 AEAELNLPPGFRFHPTDDELVEHYLCRKAAGQ----RLPVPIIAEVD----LYKFDPWDLPERALFGAREWYFFTPRDRK   80 (174)
T ss_dssp             CCSTTTCCTTCCCCCCHHHHHHHTHHHHHHTC----CCSSSCCEECC----GGGSCGGGSGGGCSSCSSEEEEEEECCC-
T ss_pred             cccccCCCCcceeCCCHHHHHHHHHHHHhcCC----CCCcCeeeecc----cccCCchhhhhhhccCCceEEEEeccccc
Confidence            45678999999999999999999999999997    44567899988    8999999999987655 479999999999


Q ss_pred             cCCCCccceeccCCCCCccEEeecCCCceeeeCCeeeEEEEEEEeeeeccCCCCCCCcCeEEEEEEeCCCCC--------
Q 014310          131 YSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEED--------  202 (427)
Q Consensus       131 y~~G~R~rR~~~~G~~g~G~Wk~tGk~K~I~~~G~vVG~KKtLvFY~gr~~g~kg~KT~WVMHEY~L~~~~~--------  202 (427)
                      |++|.|++|+++     .||||+||++++|..+|.+||+||+||||.+++  +++.||+||||||+|.....        
T Consensus        81 y~~g~R~nR~t~-----~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~--p~g~kT~WvMhEY~L~~~~~~~~~~~~~  153 (174)
T 3ulx_A           81 YPNGSRPNRAAG-----NGYWKATGADKPVAPRGRTLGIKKALVFYAGKA--PRGVKTDWIMHEYRLADAGRAAAGAKKG  153 (174)
T ss_dssp             ----CCSCEEET-----TEEEEECSCCEEECCSSSCCEEEEEEEEEESST--TSCEEEEEEEEEEEECSCC---------
T ss_pred             cCCCCCceeecC-----CceEccCCCCcEEeeCCcEEEEEEEEEEecCCC--CCCCcCCeEEEEEEeCCCCCcccccccC
Confidence            999999999984     479999999999999999999999999999986  57899999999999997642        


Q ss_pred             -CCCCCEEEEEEEeeCC
Q 014310          203 -EKDRDYVISKISYQQQ  218 (427)
Q Consensus       203 -~~~~e~VLCKIf~K~~  218 (427)
                       ...++|||||||+|+.
T Consensus       154 ~~~~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          154 SLRLDDWVLCRLYNKKN  170 (174)
T ss_dssp             --CCSSEEEEEEEESCC
T ss_pred             CCCCCCEEEEEEEEcCC
Confidence             1357999999999876

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=3e-51  Score=376.24  Aligned_cols=153  Identities=29%  Similarity=0.485  Sum_probs=126.6

Q ss_pred             CCCCCCCCCCceeCCChHHHHHHHHHhhhcCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCCC-CceEEEEecccc
Q 014310           52 AHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDG-SAAHFFYRAIKA  130 (427)
Q Consensus        52 ~~~~~~LPpGfRF~PTDeELI~hYL~kKi~G~~~p~Pli~~~Ip~vD~d~~Iy~~ePwdLPg~~~dG-~~wYFFs~r~kk  130 (427)
                      ...++.|||||||+|||||||.|||++|+.|.    |++..+|+++|    ||++|||+||+.+..| .+||||+++.++
T Consensus        11 ~~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~----~~~~~~I~e~D----iy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k   82 (171)
T 1ut7_A           11 PLTQLSLPPGFRFYPTDEELMVQYLCRKAAGY----DFSLQLIAEID----LYKFDPWVLPNKALFGEKEWYFFSPRDRK   82 (171)
T ss_dssp             -CCSSCCCTTEEECCCHHHHHHHTHHHHHTTC----CCSSCCSEECC----GGGSCGGGHHHHSSSCSSEEEEEEECCC-
T ss_pred             cccccCCCCcceeCCChHHHHHHHHHHHhcCC----CCCCCeEeecc----cccCChhHhhchhhcCCccEEEEeccccc
Confidence            35578999999999999999999999999997    45568899988    8999999999987554 589999999999


Q ss_pred             cCCCCccceeccCCCCCccEEeecCCCceeeeCCeeeEEEEEEEeeeeccCCCCCCCcCeEEEEEEeCCCCC----CCCC
Q 014310          131 YSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEED----EKDR  206 (427)
Q Consensus       131 y~~G~R~rR~~~~G~~g~G~Wk~tGk~K~I~~~G~vVG~KKtLvFY~gr~~g~kg~KT~WVMHEY~L~~~~~----~~~~  206 (427)
                      |++|.|++|+++     .||||+||++++|..+|.+||+||+||||.+++  +++.||+|+||||+|.....    ...+
T Consensus        83 ~~~g~R~~R~t~-----~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~--p~g~kT~WvMhEY~l~~~~~~~~~~~~~  155 (171)
T 1ut7_A           83 YPNGSRPNRVAG-----SGYWKATGTDKIISTEGQRVGIKKALVFYIGKA--PKGTKTNWIMHEYRLIEPSRRNGSTKLD  155 (171)
T ss_dssp             ------CCEEET-----TEEEEEEEEEEEEEETTEEEEEEEEEEEEESST--TSCEEEEEEEEEEEECCCC--------C
T ss_pred             cCCCCcccccCC-----CCEEeccCCCceEEecCcEEEEEEEEEEEcCcC--CCCCcCCeEEEEEEcCCCccccCcccCC
Confidence            999999999984     479999999999999999999999999999986  57899999999999997652    2468


Q ss_pred             CEEEEEEEeeCCc
Q 014310          207 DYVISKISYQQQQ  219 (427)
Q Consensus       207 e~VLCKIf~K~~~  219 (427)
                      +|||||||+|..+
T Consensus       156 ~~VlCrv~~k~~~  168 (171)
T 1ut7_A          156 DWVLCRIYKKQSS  168 (171)
T ss_dssp             CEEEEEEEECC--
T ss_pred             CEEEEEEEEcCCC
Confidence            9999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	427
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-35

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  126 bits (318), Expect = 2e-35
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 20/165 (12%)

Query: 58  LPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD 117
           LP G +F P+D+E++   L +        + F  + I  +D    +    P  LP     
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRK----AAGYDFSLQLIAEID----LYKFDPWVLPNKALF 68

Query: 118 GSAAHFFY-RAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLY 176
           G    +F+    + Y  G+R  R       G   W  TG  K +  +G + G KK +V Y
Sbjct: 69  GEKEWYFFSPRDRKYPNGSRPNRVA-----GSGYWKATGTDKIISTEGQRVGIKKALVFY 123

Query: 177 MSMVRGGKAEKTNWVMHQYHLGTEEDE----KDRDYVISKISYQQ 217
           +   +  K  KTNW+MH+Y L          K  D+V+ +I  +Q
Sbjct: 124 IG--KAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	427
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-47  Score=347.30  Aligned_cols=151  Identities=29%  Similarity=0.474  Sum_probs=124.3

Q ss_pred             CCCCCCCCCCceeCCChHHHHHHHHHhhhcCCCCCCCcccccccccccCCCCCCCCCCCCCCCCCC-CCceEEEEecccc
Q 014310           52 AHEWPGLPRGVKFDPSDQEIIWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQD-GSAAHFFYRAIKA  130 (427)
Q Consensus        52 ~~~~~~LPpGfRF~PTDeELI~hYL~kKi~G~~~p~Pli~~~Ip~vD~d~~Iy~~ePwdLPg~~~d-G~~wYFFs~r~kk  130 (427)
                      .+..+.|||||||+|||+|||.|||++|+.|.    |++.++|+++|    ||+.|||+||+.... +++||||+++.++
T Consensus        11 ~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~----~l~~~~I~~~D----vy~~~Pw~Lp~~~~~~~~~wyFft~~~~k   82 (166)
T d1ut7a_          11 PLTQLSLPPGFRFYPTDEELMVQYLCRKAAGY----DFSLQLIAEID----LYKFDPWVLPNKALFGEKEWYFFSPRDRK   82 (166)
T ss_dssp             -CCSSCCCTTEEECCCHHHHHHHTHHHHHTTC----CCSSCCSEECC----GGGSCGGGHHHHSSSCSSEEEEEEECCC-
T ss_pred             ccccccCCCccccCCCcHHHHHHHHHHHHcCC----CCCcccceecc----CCcCChhhccchhccCcceEEEEeeeccc
Confidence            45577999999999999999999999999997    56678999987    899999999987643 4579999999999


Q ss_pred             cCCCCccceeccCCCCCccEEeecCCCceeeeCCeeeEEEEEEEeeeeccCCCCCCCcCeEEEEEEeCCCCC----CCCC
Q 014310          131 YSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEKTNWVMHQYHLGTEED----EKDR  206 (427)
Q Consensus       131 y~~G~R~rR~~~~G~~g~G~Wk~tGk~K~I~~~G~vVG~KKtLvFY~gr~~g~kg~KT~WVMHEY~L~~~~~----~~~~  206 (427)
                      +++|.|.+|+++     +|+||.+|+.++|..+|.+||+||+|+||.++.  +++.+|+|+||||+|.....    ...+
T Consensus        83 ~~~g~r~~R~~g-----~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~--~~~~~t~W~M~EY~l~~~~~~~~~~~~~  155 (166)
T d1ut7a_          83 YPNGSRPNRVAG-----SGYWKATGTDKIISTEGQRVGIKKALVFYIGKA--PKGTKTNWIMHEYRLIEPSRRNGSTKLD  155 (166)
T ss_dssp             ------CCEEET-----TEEEEEEEEEEEEEETTEEEEEEEEEEEEESST--TSCEEEEEEEEEEEECCCC--------C
T ss_pred             cCCCCccccccC-----CCEecccCCCceEecCCcEEEEEEEEEEEecCC--CCCCccCeEEEEEecCCcccccCccccC
Confidence            999999999884     479999999999999999999999999999875  57789999999999987643    2457


Q ss_pred             CEEEEEEEeeC
Q 014310          207 DYVISKISYQQ  217 (427)
Q Consensus       207 e~VLCKIf~K~  217 (427)
                      +|||||||+|+
T Consensus       156 ~~VLCrI~~Kk  166 (166)
T d1ut7a_         156 DWVLCRIYKKQ  166 (166)
T ss_dssp             CEEEEEEEECC
T ss_pred             CEEEEEEEecC
Confidence            89999999874