Citrus Sinensis ID: 014316
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 427 | 2.2.26 [Sep-21-2011] | |||||||
| Q9BT22 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.906 | 0.834 | 0.437 | 2e-85 | |
| Q5R7A2 | 464 | Chitobiosyldiphosphodolic | yes | no | 0.908 | 0.836 | 0.434 | 2e-84 | |
| Q921Q3 | 482 | Chitobiosyldiphosphodolic | yes | no | 0.913 | 0.809 | 0.431 | 4e-83 | |
| P90522 | 493 | Chitobiosyldiphosphodolic | yes | no | 0.920 | 0.797 | 0.393 | 1e-79 | |
| O13933 | 424 | Chitobiosyldiphosphodolic | yes | no | 0.829 | 0.834 | 0.390 | 2e-68 | |
| Q6C3K2 | 463 | Chitobiosyldiphosphodolic | yes | no | 0.838 | 0.773 | 0.383 | 5e-66 | |
| P16661 | 449 | Chitobiosyldiphosphodolic | yes | no | 0.859 | 0.817 | 0.349 | 1e-55 | |
| Q75BA5 | 471 | Chitobiosyldiphosphodolic | yes | no | 0.857 | 0.777 | 0.347 | 2e-55 | |
| Q59Q79 | 456 | Chitobiosyldiphosphodolic | N/A | no | 0.833 | 0.780 | 0.331 | 6e-55 | |
| Q6CVU2 | 447 | Chitobiosyldiphosphodolic | yes | no | 0.852 | 0.814 | 0.331 | 2e-54 |
| >sp|Q9BT22|ALG1_HUMAN Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Homo sapiens GN=ALG1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/427 (43%), Positives = 253/427 (59%), Gaps = 40/427 (9%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K ++Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVLQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W EK++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
+LA NW I+A +YD+P FF T L+ +H LF +L +H P + + E
Sbjct: 201 EDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR----SEPEDPVT 255
Query: 239 DETIFTSL---AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
+ + FT +G+ L+ RPAL+VSSTSWT DEDF ILL A
Sbjct: 256 ERSAFTERDAGSGLVTRLR-ERPALLVSSTSWTEDEDFSILLAAL--------------- 299
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
E F + DG P L+ +ITGKGP +E Y I + + + T WL AEDY
Sbjct: 300 ----EKFEQLTLDGHNL--PSLVCVITGKGPLREYYSRLIHQKHFQHIQVCTPWLEAEDY 353
Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 415
PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F S
Sbjct: 354 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFEDS 413
Query: 416 SELADQL 422
ELA QL
Sbjct: 414 EELAAQL 420
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Homo sapiens (taxid: 9606) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4EC: 2 |
| >sp|Q5R7A2|ALG1_PONAB Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Pongo abelii GN=ALG1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/426 (43%), Positives = 250/426 (58%), Gaps = 38/426 (8%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGR VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRTARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G P+V + +K + Q LLW L + +FL QNPP +P++
Sbjct: 86 VGLTELQSLAVG-PRVFQ---YGVKVVFQAMYLLWKLMWREPGAYIFL-QNPPGLPSIAV 140
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ L S ++DWHN+GY+++ L G V + +W E+++G++++ LCVT AM+
Sbjct: 141 CWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYERFFGRLSHLNLCVTNAMR 200
Query: 179 HELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
+LA+NW I+A +YD+P FF T L+ +H LF +L H P + + E
Sbjct: 201 EDLAENWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGGT-HSPFRAR----SEPEDPAT 255
Query: 239 DETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 296
+ + FT AG + + RPAL+VSSTSWT DEDF ILL A
Sbjct: 256 ERSAFTERDAGSGLVTRLHERPALLVSSTSWTEDEDFSILLAAL---------------- 299
Query: 297 TNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYP 356
E F + DG P L+ +ITGKGP +E Y I + + + T WL AEDYP
Sbjct: 300 ---EKFEQLTLDGHSL--PSLVCVITGKGPLREYYSHLIHQKHFQHIQVCTPWLEAEDYP 354
Query: 357 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 416
LLLGSADLGVCLHTSSSGLDLPMKVVDMFGC LPVCAV++ C+ ELVK ++NGL+F S
Sbjct: 355 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVKHEENGLVFEDSE 414
Query: 417 ELADQL 422
ELA QL
Sbjct: 415 ELAAQL 420
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q921Q3|ALG1_MOUSE Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Mus musculus GN=Alg1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 308 bits (790), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/422 (43%), Positives = 250/422 (59%), Gaps = 32/422 (7%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T + G P++L+ +K + Q LLW + + +FL QNPP +P + +
Sbjct: 89 TDLRGLGAG-PRILQ---YGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPAIAVCWF 143
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +L
Sbjct: 144 VGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMREDL 203
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM-EGQKADE 240
A+NW ++A LYD+P FF T L+ +HELF +L+ H Q C + +++
Sbjct: 204 AENWCVRAVTLYDKPASFFKETPLDLQHELFMKLS---HTYSPFQSCSDPSHPDTERSAF 260
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T +G+ L RPAL+VSSTSWT DEDF ILL A ++++ L D
Sbjct: 261 TERDCQSGVVRRLH-GRPALLVSSTSWTEDEDFSILLRALEKFEQQA---LTGDS----- 311
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
P L+ +ITGKGP +E Y I + L+ V F T WL AEDYPLLLG
Sbjct: 312 -------------LPSLVCVITGKGPLREHYRHLISQKHLQHVRFCTPWLEAEDYPLLLG 358
Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
SADLGVCLH SSSGLDLPMKVVDMFGC LPVCAV++ C+ ELV+ +NGL+F + ELA
Sbjct: 359 SADLGVCLHMSSSGLDLPMKVVDMFGCHLPVCAVNFKCLHELVRHGENGLVFKDAEELAA 418
Query: 421 QL 422
QL
Sbjct: 419 QL 420
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P90522|ALG1_DICDI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Dictyostelium discoideum GN=alg1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 242/427 (56%), Gaps = 34/427 (7%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
R VVVLGD+GRSPRMQY ++SL++ + +V ++ Y S+PH I+ + SI I + +
Sbjct: 2 NRVAVVVLGDIGRSPRMQYHSMSLSKLENTKVTLIGYRESEPHPQIVNNDSITIEPLKPF 61
Query: 65 P-TIPRGLPKV------LKPVLLLLKPLIQFFMLLWFLCVKIASP-DVFLVQNPPSVPTL 116
P ++ K+ + P+L + K L Q L++ L VK+ SP + LVQ+PP++PT+
Sbjct: 62 PISMSNSFKKIPLISIFMWPLLAICKVLFQIIQLMYVLLVKVPSPLNTILVQSPPAIPTI 121
Query: 117 VAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH--FVSIYRWIEKYYGKMANGCLCVT 174
++ +R ++DWHN GYTLL LSL + + + + ++IE+Y+ K A L VT
Sbjct: 122 FVMQIVCWIRGVHLVIDWHNLGYTLLKLSLSKSDNHPIIRLAKFIERYFAKNAYAHLFVT 181
Query: 175 QAMQHELAQNWGIKAT--VLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232
M+ +L ++W +K V +D+ F + E+ E N
Sbjct: 182 NEMKIQLVRDWNLKGKTFVFHDKASPIFKSLTDREQEEFL--------------KTFINK 227
Query: 233 MEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAIL 291
+ D+ S+ P + ++++SSTSWT DEDF ILL+A + YD + +
Sbjct: 228 YSIKGEDKVYIESVISKKSIRNPKQQTSIIISSTSWTQDEDFSILLDAIVKYD--IEHAI 285
Query: 292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS 351
N +++ EE D L LLFIITGKGP KE Y+EKI L LK+ T+WL
Sbjct: 286 NNNNNKVEEA-----QDESVVLAENLLFIITGKGPQKEYYQEKINSLSLKKSRIITVWLD 340
Query: 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411
+EDYP LL DLGV LH SSSG+DLPMKVVDMFGC LPV A+ + CI ELVKV+ NG L
Sbjct: 341 SEDYPKLLACCDLGVSLHNSSSGIDLPMKVVDMFGCCLPVLAIDFKCIGELVKVNYNGFL 400
Query: 412 FSSSSEL 418
F S +L
Sbjct: 401 FKDSDQL 407
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|O13933|ALG1_SCHPO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/425 (39%), Positives = 229/425 (53%), Gaps = 71/425 (16%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILE-HPSIHIHTMT 62
+ R V+VLGD+ RSPRMQY A+S A+ + +VD++ Y + E H +I + +
Sbjct: 24 KKRIIVLVLGDIARSPRMQYHAVSFAK-LGWKVDLLGYQHPGSSVGLFESHENIRFYPI- 81
Query: 63 QWPTIPRGL-PKVLKPVLLL--LKPLIQFFMLLWFLCVKIASPDVFL-VQNPPSVPTLVA 118
P++P L PK L L LK L QF L W L V+ P FL +QNPP +P
Sbjct: 82 --PSLPAYLQPKNRLQFLFLGPLKVLHQFLALNWALFVR--KPASFLFIQNPPCIPVFFI 137
Query: 119 VKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ LR + FI+DWHNFGY++L+L LG++ FV + + EKY + A L V++ M+
Sbjct: 138 AQCLHILRGTKFIIDWHNFGYSILALKLGKQHTFVKLLKIYEKYMARGAYAHLTVSKRMK 197
Query: 179 HELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
++ Q WG+ V YD+PP F P E+K ++
Sbjct: 198 -DVLQTWGMNPCYVCYDRPPNHFTPIKNEQKKQM-------------------------- 230
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
S+ I P+ L+++STSWTPDED IL EA LNE D T
Sbjct: 231 -------SIKKIPCEYNPSSTKLLITSTSWTPDEDIYILWEA-----------LNEYDKT 272
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
+ P+LL +ITGKGP KE + + I++ L +V F WLS EDYP
Sbjct: 273 LDT--------------PKLLVLITGKGPMKEEFSQYIKKHPLHKVRFCMPWLSIEDYPQ 318
Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
++ ADLGVCLHTSSSGLDLPMKVVD+FGCG+PV A+SY I ELV +NGL+ + S
Sbjct: 319 VMACADLGVCLHTSSSGLDLPMKVVDLFGCGVPVIALSYPTISELVHDGENGLIVNDSKA 378
Query: 418 LADQL 422
L+ ++
Sbjct: 379 LSKKM 383
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6C3K2|ALG1_YARLI Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 252 bits (643), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 224/428 (52%), Gaps = 70/428 (16%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
+R R V+VLGDLGRSPRM Y A SLAR +VD+ Y G+KP IL + I IH +
Sbjct: 38 KRKRTIVLVLGDLGRSPRMLYHARSLARS-GHKVDLCGYDGAKPFDEILNNDLIKIHHI- 95
Query: 63 QWPTI--PRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
P I R LP V V +LK + Q ++L+ L K+ D LVQNPPS+PTL V+
Sbjct: 96 --PLILNTRKLPFV---VFGILKVIRQHWLLISLLY-KLRGADYLLVQNPPSIPTLGVVR 149
Query: 121 WASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178
+ + R+ ++DWHNFGYT+L+L L V ++ E ++G A LCVT M
Sbjct: 150 FYNLFLSTRTKVVLDWHNFGYTILALKLPETHPMVKFAKFYEGFFGGRAFVHLCVTVLMG 209
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235
+ + +G+ + L+D+P F P S EK ++ + L+ +
Sbjct: 210 QAMRKTFGMSGRRIVPLHDRPAFHFKPLSESEKLDVLRDFKETLY-------------DD 256
Query: 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
AD I +VSSTS+TPDE+F ILL+A +YD +
Sbjct: 257 MTADHKI------------------IVSSTSYTPDENFNILLDALALYDESKLDL----- 293
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
P L IITGKGP + K+ +L+LKRV+ RT WL DY
Sbjct: 294 -------------------PPLRVIITGKGPMMPEFLAKVEKLQLKRVSIRTAWLEFADY 334
Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 415
P +LG+A LGV LH SSSG DLPMKVVDMFGCG+PV +V Y+ + ELVK + NG+
Sbjct: 335 PRILGAAHLGVSLHESSSGYDLPMKVVDMFGCGIPVVSVDYAALSELVKTNTNGVAVKGH 394
Query: 416 SELADQLL 423
E+ + +
Sbjct: 395 VEMGNTFM 402
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|P16661|ALG1_YEAST Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALG1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 219/426 (51%), Gaps = 59/426 (13%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R + VLGD+G SPR+ Y A+S ++ + +V++ Y I P+I +H M+
Sbjct: 38 KKRIIIFVLGDVGHSPRICYHAISFSK-LGWQVELCGYVEDTLPKIISSDPNITVHHMSN 96
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTL-VAVKWA 122
G V+ V +L ++ F LLW ++ D LVQNPPS+P L +AV +
Sbjct: 97 LKR-KGGGTSVIFMVKKVLFQVLSIFKLLW----ELRGSDYILVQNPPSIPILPIAVLY- 150
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL-GRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
L I+DWHN Y++L L G H V I +E + K A+ L VT+AM+
Sbjct: 151 -KLTGCKLIIDWHNLAYSILQLKFKGNFYHPLVLISYMVEMIFSKFADYNLTVTEAMRKY 209
Query: 181 LAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
L Q++ + + VLYD+P F P + + + K L +++ + + + +K
Sbjct: 210 LIQSFHLNPKRCAVLYDRPASQFQPLAGDISRQ------KALTTKAFIKNYIRDDFDTEK 263
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
D+ ++V+STS+TPDED GILL A +Y+ DS+
Sbjct: 264 GDK-------------------IIVTSTSFTPDEDIGILLGALKIYENSYVKF----DSS 300
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
P++L ITGKGP KE Y +++ KR +WLSAEDYP
Sbjct: 301 ----------------LPKILCFITGKGPLKEKYMKQVEEYDWKRCQIEFVWLSAEDYPK 344
Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
LL D GV LHTSSSGLDLPMK++DMFG GLPV A++Y ++ELV+ + NGL F E
Sbjct: 345 LLQLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVIAMNYPVLDELVQHNVNGLKFVDRRE 404
Query: 418 LADQLL 423
L + L+
Sbjct: 405 LHESLI 410
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Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q75BA5|ALG1_ASHGO Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ALG1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 216/426 (50%), Gaps = 60/426 (14%)
Query: 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWP 65
R + VLGDLG SPR+ Y A S + EV++ Y +P +L+ P + I +
Sbjct: 64 RIAIYVLGDLGHSPRICYHARSFS-AAGWEVELCGYLEEQPPKDLLDDPRVTIRALPGAS 122
Query: 66 TIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL 125
+ L + + V+L +++ LW ++ D L+QNPPS+P L V L
Sbjct: 123 NAGKSLGQTARKVVLQTCHIVR---QLW----ELRGCDYILIQNPPSIPLLPIVAIFKVL 175
Query: 126 RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
R+ I+DWHNF YT+L L +GR H V + +E + +MA+ + VT AM+ L Q+
Sbjct: 176 TRTRLILDWHNFAYTVLQLRVGRFLHPLVLVSYAVEFLFSRMADYHITVTAAMKDYLVQS 235
Query: 185 WGIKA---TVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADET 241
+ + A V+YD+P E F P E+ L +P ++ + G + Q+ D
Sbjct: 236 FLLPARRIAVMYDRPGEQFRPLPAGER-------GAALAEPF-IRGYIPAGFDVQRGD-- 285
Query: 242 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
++V+STS+T DED +L A +Y+ A D+T
Sbjct: 286 -----------------TILVTSTSFTLDEDINVLFGALKIYESAAAKF----DTT---- 320
Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
PR+L +TGKGP K Y E++R + +R +WLSAEDYP LL
Sbjct: 321 ------------LPRILLFVTGKGPLKGKYMEEVRNYKWERCTIHFLWLSAEDYPRLLQL 368
Query: 362 ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQ 421
D GV LHTS+SGLDLPMKV+DMFG GLP + Y I ELV+ NGL F++ EL +Q
Sbjct: 369 CDFGVSLHTSTSGLDLPMKVLDMFGSGLPAFVMDYPAIGELVQDRVNGLRFTTRREL-EQ 427
Query: 422 LLVNAL 427
L+ A+
Sbjct: 428 CLIFAI 433
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q59Q79|ALG1_CANAL Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (547), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 219/428 (51%), Gaps = 72/428 (16%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
+R + VLGDLG SPRM Y A S ++ + V++ Y ++P I++ +I I +
Sbjct: 49 NKRKTISIFVLGDLGHSPRMCYHASSFSK-LDYYVNLCGYVETEPSHQIVDDVNIDIIPI 107
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
LP ++ +L +++ + + +LW D ++QNPPS+P L+ V
Sbjct: 108 EAIKNT-NNLPYIMFAILKVVRQCGKIWSILW----DTRGSDYIMIQNPPSIPILLIVIL 162
Query: 122 ASSL--RRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAMQ 178
++ R + I+DWHN YT+L+L +H FV + + EK G+ AN + VT++M+
Sbjct: 163 FKTVFSRETKLIIDWHNLNYTILNLRYNNLNHPFVKLVKLYEKILGQFANLNITVTKSMK 222
Query: 179 HELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235
L + +G K LYD+P F P L K E M
Sbjct: 223 KYLVKEFGFQKSKIVTLYDRPGVQFQP--LSNKREF---------------------MSE 259
Query: 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
K E ID+ + +++SSTS+TPDEDF ILL+A + N ++
Sbjct: 260 HKLFE-------DIDI----EKYKVLISSTSFTPDEDFNILLDA----------LKNYEN 298
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAED 354
+ N P +L I+TGKGP K + E + +L +V ++ WLS+ED
Sbjct: 299 TPNT---------------PPILLIVTGKGPLKGKFLETVDKLEFTNKVCVKSAWLSSED 343
Query: 355 YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS 414
YP +L ADLG+ LHTSSSG+DLPMK+VD FGCG+PV ++ + I+ELVK NGL+ +S
Sbjct: 344 YPKVLACADLGISLHTSSSGIDLPMKIVDFFGCGVPVVSLDFPAIDELVKNKVNGLITNS 403
Query: 415 SSELADQL 422
S+ ++
Sbjct: 404 KSDQTKEV 411
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
| >sp|Q6CVU2|ALG1_KLULA Chitobiosyldiphosphodolichol beta-mannosyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ALG1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 215/428 (50%), Gaps = 64/428 (14%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
+ R +VVLGDLG SPR+ Y A S ++ +V++ Y S IL+ +I IH + +
Sbjct: 42 KTRILIVVLGDLGHSPRILYHARSFSK-AGFQVELSGYVDSDIPTDILDDDNIEIHGLKK 100
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
+ + L K LK L Q + W K+ + D L+QNPP++P L
Sbjct: 101 YGSEKGLLVKALKQGL-------QLCSMFW----KLRAVDYILLQNPPTIPILPIAVVVK 149
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRR--SHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
+ R+ I+DWHN GYT+L + + V + IE + K AN L VT+AM+ L
Sbjct: 150 TFSRAKLIIDWHNLGYTILQMKFKDQFLHPLVLLAYLIEWIFAKFANYHLTVTKAMKTYL 209
Query: 182 AQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238
+ +GI K VLYD+P + F P + E + Q+ ++ + +
Sbjct: 210 VEKFGIDGKKIAVLYDRPGKQFSPLKEADDREALLK-----------QEFIAKYIPKE-- 256
Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
D+ ++ + V+STS+TPDED +L+ + +Y+ D T
Sbjct: 257 ----------FDI----SKDKIFVTSTSFTPDEDISVLIGSFKIYENSFQKF----DQT- 297
Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
PR+L ITGKGP +E ++++ + RV +WLS+EDYP L
Sbjct: 298 ---------------LPRILCFITGKGPLQEKIVKQVQDFKWDRVQVEFLWLSSEDYPKL 342
Query: 359 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418
L D GV LHTSSSGLDLPMK++DMFG GLPV ++Y ++ELV+ + NGL F+ EL
Sbjct: 343 LRLCDYGVSLHTSSSGLDLPMKILDMFGSGLPVICMNYPVLDELVQQNVNGLKFADRREL 402
Query: 419 ADQLLVNA 426
+ L+ +
Sbjct: 403 HEALIFSV 410
|
Participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. Involved in assembling the dolichol-pyrophosphate-GlcNAc(2)-Man(5) intermediate on the cytoplasmic surface of the ER. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 427 | ||||||
| 225458860 | 598 | PREDICTED: chitobiosyldiphosphodolichol | 0.992 | 0.709 | 0.805 | 0.0 | |
| 302142187 | 484 | unnamed protein product [Vitis vinifera] | 0.992 | 0.876 | 0.805 | 0.0 | |
| 388521579 | 484 | unknown [Medicago truncatula] | 0.990 | 0.873 | 0.793 | 0.0 | |
| 357451823 | 498 | Chitobiosyldiphosphodolichol beta-mannos | 0.990 | 0.849 | 0.793 | 0.0 | |
| 356555181 | 521 | PREDICTED: chitobiosyldiphosphodolichol | 0.990 | 0.811 | 0.783 | 0.0 | |
| 224121616 | 481 | predicted protein [Populus trichocarpa] | 0.990 | 0.879 | 0.791 | 0.0 | |
| 255582792 | 476 | beta1,4 mannosyltransferase, putative [R | 0.985 | 0.884 | 0.783 | 0.0 | |
| 449445120 | 480 | PREDICTED: chitobiosyldiphosphodolichol | 0.988 | 0.879 | 0.767 | 0.0 | |
| 186478554 | 496 | beta-1,4-mannosyltransferase [Arabidopsi | 0.974 | 0.838 | 0.734 | 0.0 | |
| 297850068 | 465 | predicted protein [Arabidopsis lyrata su | 0.971 | 0.892 | 0.735 | 0.0 |
| >gi|225458860|ref|XP_002283369.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/427 (80%), Positives = 377/427 (88%), Gaps = 3/427 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 124 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 183
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 184 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 243
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 244 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 303
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG-ME--GQK 237
LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ G ME Q
Sbjct: 304 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 363
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 364 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 423
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 424 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 483
Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
LLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLFSSSSE
Sbjct: 484 LLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSE 543
Query: 418 LADQLLV 424
LA++LL+
Sbjct: 544 LANELLM 550
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142187|emb|CBI19390.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/427 (80%), Positives = 377/427 (88%), Gaps = 3/427 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
+GRRGRA VVVLGD+GRSPRMQY ALSLARQ SLEVD+VAYGGS PH+A+LE+PSIHIHT
Sbjct: 9 IGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHT 68
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWPTIPR + K+ P++LL K L QFF L WFLCVKI SPDVF+VQNPPSVPTLVAVK
Sbjct: 69 MKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVK 128
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR SAFIVDWHNFGYTLL LSLGR S FV++Y W EKYYGK ANG LCVT+AMQHE
Sbjct: 129 WASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHE 188
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG-ME--GQK 237
LAQNWGIKATVLYDQPPEFF PT +EEKH+LFCRL+K L P G QDCV+ G ME Q
Sbjct: 189 LAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQD 248
Query: 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
DET+FT+ D+FLK NRPALVVSSTSWTPDEDFG+LLEAA+MYDRRVAAILNEDDST
Sbjct: 249 TDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDST 308
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
EEV KE + GKQ+LYPRLLFIITGKGP+KE YEEKIR+L+L RVAFRTMWLSAEDYPL
Sbjct: 309 KEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPL 368
Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
LLGSADLG+CLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV+KNGLLFSSSSE
Sbjct: 369 LLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSE 428
Query: 418 LADQLLV 424
LA++LL+
Sbjct: 429 LANELLM 435
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388521579|gb|AFK48851.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/426 (79%), Positives = 378/426 (88%), Gaps = 3/426 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG---MEGQKA 238
AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSNG M Q
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251
Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
+ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311
Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371
Query: 359 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418
LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFSSSSEL
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSEL 431
Query: 419 ADQLLV 424
AD+LL
Sbjct: 432 ADELLT 437
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357451823|ref|XP_003596188.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] gi|355485236|gb|AES66439.1| Chitobiosyldiphosphodolichol beta-mannosyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/426 (79%), Positives = 378/426 (88%), Gaps = 3/426 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSL+ Q LEVD+VAYGGS+PH ++L +PSIHIH M
Sbjct: 12 GRRGRACVVVLGDIGRSPRMQYHALSLSNQAFLEVDIVAYGGSEPHTSLLANPSIHIHLM 71
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QWPT + LPK+L+P +LLLKPLIQF MLLW+LCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 72 KQWPTARQNLPKILQPFMLLLKPLIQFVMLLWYLCVKIPSPDIFIVQNPPSVPTLVAVKW 131
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL +SLGR S FVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 132 ASWLRNSSFVIDWHNFGYTLLGMSLGRNSRFVSLYKWFEKHYGKMADTSLCVTKAMQHEL 191
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG---MEGQKA 238
AQNWGI ATVLYDQPP+FFHP SLEE+H+LFCRLN+ + PLGV DCVSNG M Q
Sbjct: 192 AQNWGINATVLYDQPPDFFHPASLEERHKLFCRLNEHFYHPLGVGDCVSNGTSLMSSQIQ 251
Query: 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTN 298
+ET+FT+ AG +V LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS +
Sbjct: 252 NETLFTTEAGSNVSLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSLD 311
Query: 299 EEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLL 358
EEV KEISDGKQ LYPRLLF+ITGKGP+K YE KI+ L+LKRVAFRTMWLSA+DYPLL
Sbjct: 312 EEVIWKEISDGKQCLYPRLLFVITGKGPEKAKYEAKIKSLKLKRVAFRTMWLSADDYPLL 371
Query: 359 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418
LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI+ELV VDKNGLLFSSSSEL
Sbjct: 372 LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIKELVSVDKNGLLFSSSSEL 431
Query: 419 ADQLLV 424
AD+LL
Sbjct: 432 ADELLT 437
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555181|ref|XP_003545914.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/429 (78%), Positives = 381/429 (88%), Gaps = 6/429 (1%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GRRGRACVVVLGD+GRSPRMQY ALSLA Q SLEVD+VAYGGS+PH A+L +PSIHI+ M
Sbjct: 11 GRRGRACVVVLGDIGRSPRMQYHALSLANQASLEVDIVAYGGSEPHTALLANPSIHIYIM 70
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
QW T + LPK+L+P++LLLKPL+QF MLLWFLCVKI SPD+F+VQNPPSVPTLVAVKW
Sbjct: 71 KQWLTASQSLPKILRPIMLLLKPLVQFCMLLWFLCVKIPSPDIFIVQNPPSVPTLVAVKW 130
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
AS LR S+F++DWHNFGYTLL+LSLGR SHFVS+Y+W EK+YGKMA+ LCVT+AMQHEL
Sbjct: 131 ASWLRNSSFVIDWHNFGYTLLALSLGRNSHFVSLYKWFEKHYGKMADASLCVTKAMQHEL 190
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK---- 237
AQNWGI ATVLYDQPP+ FHP SLEE+H+LFCRLN+ L + LGV+DCVSNG G
Sbjct: 191 AQNWGINATVLYDQPPDIFHPASLEERHKLFCRLNEDLFRSLGVRDCVSNGKIGNSLVAS 250
Query: 238 --ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295
+ET+F + G +++LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAIL EDD
Sbjct: 251 CHQNETLFATEVGSNIYLKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILGEDD 310
Query: 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDY 355
S +EEV KEISDGKQ LYPRLLFIITGKGP+KE YE KI+R++LKRVAFRTMWLSA+DY
Sbjct: 311 SVDEEVIWKEISDGKQCLYPRLLFIITGKGPEKEKYEVKIKRMKLKRVAFRTMWLSADDY 370
Query: 356 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSS 415
PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELV+VDKNGLLFSSS
Sbjct: 371 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIRELVRVDKNGLLFSSS 430
Query: 416 SELADQLLV 424
SELAD+LL+
Sbjct: 431 SELADELLL 439
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121616|ref|XP_002330745.1| predicted protein [Populus trichocarpa] gi|222872521|gb|EEF09652.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/427 (79%), Positives = 376/427 (88%), Gaps = 4/427 (0%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGD+GRSPRMQY ALSLARQ SL+VD+VAYGGS+PH A+ E+ SIHIH
Sbjct: 1 MGKRGRACVVVLGDIGRSPRMQYHALSLARQASLQVDIVAYGGSEPHMALRENQSIHIHK 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M QWP IP+GLPK+ KP +LLLKPL QF MLLW+LCVKI PDVFLVQNPPSVPTLVAVK
Sbjct: 61 MKQWPAIPQGLPKMFKPFMLLLKPLFQFLMLLWYLCVKIPPPDVFLVQNPPSVPTLVAVK 120
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WAS LR + FIVDWHNFGYTLL+LSLGR S FV++YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 121 WASWLRNAKFIVDWHNFGYTLLALSLGRNSRFVTVYRWFERHYGKMAHGSLCVTRAMQHE 180
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA-- 238
L QNWGIKA VLYDQPPEFFHP SLEEKH+LFCRL K + + GV DC S+G G +
Sbjct: 181 LTQNWGIKAAVLYDQPPEFFHPASLEEKHKLFCRLGKHISESQGVHDCASHGAVGMGSPN 240
Query: 239 -DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDST 297
+ET+FT++ D+FLKPNRPALVVSSTSWT DEDFGILLEAA+MYDRRVAAILNEDDST
Sbjct: 241 LNETLFTTMVADDIFLKPNRPALVVSSTSWTADEDFGILLEAAVMYDRRVAAILNEDDST 300
Query: 298 NEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357
EV E+S GK+ LYPRLLFIITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPL
Sbjct: 301 -VEVLWNEMSAGKECLYPRLLFIITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPL 359
Query: 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417
LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELVKV+KNGLLFSSSSE
Sbjct: 360 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVKVEKNGLLFSSSSE 419
Query: 418 LADQLLV 424
LAD+LL+
Sbjct: 420 LADELLM 426
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255582792|ref|XP_002532170.1| beta1,4 mannosyltransferase, putative [Ricinus communis] gi|223528138|gb|EEF30207.1| beta1,4 mannosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/421 (78%), Positives = 375/421 (89%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
RGRACVVVLGD+GRSPRMQY ALSLA Q SL+VD+VAYGGS+PH A+L++ SIHIH M Q
Sbjct: 8 RGRACVVVLGDIGRSPRMQYHALSLALQASLQVDIVAYGGSEPHMALLQNQSIHIHKMKQ 67
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
WP +P+ LPK+LK ++L+LKPL QFF+LLW LC K+ +PDVF+VQNPPSVPTLVAVKWAS
Sbjct: 68 WPVLPQSLPKLLKALVLVLKPLFQFFVLLWHLCFKVPAPDVFIVQNPPSVPTLVAVKWAS 127
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
LR SAFIVDWHNFGYTLL+LSLGR S FV++YRW E++YG+MANG LCVT+AMQHELAQ
Sbjct: 128 WLRNSAFIVDWHNFGYTLLALSLGRNSRFVAVYRWFERHYGRMANGSLCVTKAMQHELAQ 187
Query: 184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243
NWGI ATVLYDQPPEFF+PTSLEEKH+LFCRL+K + QP + DC S GM +ET+F
Sbjct: 188 NWGINATVLYDQPPEFFNPTSLEEKHKLFCRLDKYIIQPGSIHDCASYGMGNHNVNETMF 247
Query: 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFL 303
T+ D LKPNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAAILNE+DS+ +EV
Sbjct: 248 TTSVDGDTILKPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAAILNENDSSLDEVLW 307
Query: 304 KEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD 363
KE++ GKQ LYPRLLF+ITGKGP+KE YEEKIRRL LKRVAFRTMWLSAEDYPLLLGSAD
Sbjct: 308 KELTKGKQCLYPRLLFVITGKGPEKEKYEEKIRRLHLKRVAFRTMWLSAEDYPLLLGSAD 367
Query: 364 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLL 423
LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV+YSCI+ELV+VDKNGLLFSSSSELAD+LL
Sbjct: 368 LGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVAYSCIKELVEVDKNGLLFSSSSELADELL 427
Query: 424 V 424
+
Sbjct: 428 M 428
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449445120|ref|XP_004140321.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] gi|449507727|ref|XP_004163113.1| PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/425 (76%), Positives = 365/425 (85%), Gaps = 3/425 (0%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
G+ GRACVVVLGDLGRSPRMQY ALSLARQ +LEVD+VAYGGS+PH+A+LEH SIHIHTM
Sbjct: 9 GKGGRACVVVLGDLGRSPRMQYHALSLARQANLEVDIVAYGGSQPHSALLEHRSIHIHTM 68
Query: 62 TQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T WP + LP + +PV LL+KPL+QF MLLWFL V+I SP F+VQNPPSVPTL+AVKW
Sbjct: 69 TPWPKFLQNLPWIFRPVTLLVKPLVQFLMLLWFL-VRICSPAFFIVQNPPSVPTLIAVKW 127
Query: 122 ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181
S L+RSAFI+DWHNFG+TLL+LSLGR S FV++YRWIEKY+GKMA+ CVT+AMQHEL
Sbjct: 128 VSVLKRSAFIIDWHNFGHTLLALSLGRNSSFVAVYRWIEKYFGKMADDSFCVTKAMQHEL 187
Query: 182 AQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS--NGMEGQKAD 239
A+NW IKATV YDQPPEFFH SL EKHELF RL+ + QPLG+QDCVS GM G +
Sbjct: 188 AENWDIKATVFYDQPPEFFHVASLLEKHELFYRLHSNIIQPLGLQDCVSYGAGMLGHEHQ 247
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE 299
ET T L G D+FLK NRPA+VVSSTSWTPDEDF ILLEAA+MYDRRVAA+LNEDDS +
Sbjct: 248 ETFSTRLVGKDIFLKQNRPAVVVSSTSWTPDEDFNILLEAAVMYDRRVAALLNEDDSIPD 307
Query: 300 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359
E KEI D KQ L+PRLLFIITGKGPDK+ YE+KI +L LKRVAFRTMWLSAEDYPLLL
Sbjct: 308 EFVWKEIYDEKQCLFPRLLFIITGKGPDKQEYEDKISKLHLKRVAFRTMWLSAEDYPLLL 367
Query: 360 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 419
GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVKV KNGLLFSSSSELA
Sbjct: 368 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCINELVKVGKNGLLFSSSSELA 427
Query: 420 DQLLV 424
D+LL+
Sbjct: 428 DELLM 432
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186478554|ref|NP_001117297.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] gi|332191352|gb|AEE29473.1| beta-1,4-mannosyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/425 (73%), Positives = 355/425 (83%), Gaps = 9/425 (2%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +E
Sbjct: 180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRELENQELNE 239
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA ++
Sbjct: 240 TLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA--- 296
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 297 ----EISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLLG 351
Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSSSSELAD
Sbjct: 352 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELAD 411
Query: 421 QLLVN 425
QLLV+
Sbjct: 412 QLLVS 416
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850068|ref|XP_002892915.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338757|gb|EFH69174.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/424 (73%), Positives = 354/424 (83%), Gaps = 9/424 (2%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + PK+L PV LLLK IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFLQLFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + FVS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLFVSLYRWFENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +E
Sbjct: 180 LDQNWGVRAQVLYDQPPEFFRPALLEERHELFCRVKKDLCHPIGVYDIISIELENQELNE 239
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA ++
Sbjct: 240 TLFTTKINTDISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAARSKGSETA--- 296
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
EIS+ Q+LYP LLFIITGKGP+KE YE KI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 297 ----EISE-DQHLYPNLLFIITGKGPEKEMYEGKIKRLNLRHVAFRTMWLAAEDYPLLLG 351
Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSSSSELAD
Sbjct: 352 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELAD 411
Query: 421 QLLV 424
QLL+
Sbjct: 412 QLLI 415
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 427 | ||||||
| TAIR|locus:2017963 | 496 | AT1G16570 [Arabidopsis thalian | 0.974 | 0.838 | 0.717 | 3.6e-160 | |
| ZFIN|ZDB-GENE-030131-6093 | 488 | alg1 "asparagine-linked glycos | 0.625 | 0.547 | 0.404 | 8.1e-87 | |
| UNIPROTKB|E1BRK4 | 462 | ALG1 "Uncharacterized protein" | 0.639 | 0.590 | 0.394 | 3.1e-85 | |
| FB|FBgn0038552 | 446 | CG18012 [Drosophila melanogast | 0.644 | 0.616 | 0.395 | 3.5e-84 | |
| UNIPROTKB|F1RKX2 | 468 | LOC100524193 "Uncharacterized | 0.644 | 0.587 | 0.379 | 4.5e-82 | |
| UNIPROTKB|Q9BT22 | 464 | ALG1 "Chitobiosyldiphosphodoli | 0.634 | 0.584 | 0.386 | 9.4e-82 | |
| UNIPROTKB|F1N2J7 | 464 | ALG1 "Uncharacterized protein" | 0.639 | 0.588 | 0.398 | 2.5e-81 | |
| MGI|MGI:2384774 | 482 | Alg1 "asparagine-linked glycos | 0.641 | 0.568 | 0.383 | 4e-81 | |
| RGD|1310700 | 481 | Alg1 "ALG1, chitobiosyldiphosp | 0.641 | 0.569 | 0.383 | 1.4e-80 | |
| UNIPROTKB|D4A5S6 | 465 | Alg1 "Protein Alg1" [Rattus no | 0.641 | 0.589 | 0.383 | 1.4e-80 |
| TAIR|locus:2017963 AT1G16570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1560 (554.2 bits), Expect = 3.6e-160, P = 3.6e-160
Identities = 305/425 (71%), Positives = 345/425 (81%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MG+RGRACVVVLGDLGRSPRMQY ALSLARQ S +VD+VAYGGS PH A+L HPSIHIHT
Sbjct: 1 MGKRGRACVVVLGDLGRSPRMQYHALSLARQASFQVDIVAYGGSIPHEAVLNHPSIHIHT 60
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + IQF MLLWFL VK+ +PD+FLVQNPPSVPTL+AVK
Sbjct: 61 MAQ-PRFIQYFPKILYPVTLLLKAFIQFTMLLWFLFVKVPAPDIFLVQNPPSVPTLIAVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
WASS RR+AF+VDWHNFGYTLL+LSLGR + VS+YRW E +YGKMA G LCVT+AMQHE
Sbjct: 120 WASSWRRAAFVVDWHNFGYTLLALSLGRNNLLVSLYRWSENHYGKMATGSLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWG++A VLYDQPPEFF P LEE+HELFCR+ K L P+GV D +S +E Q+ +E
Sbjct: 180 LDQNWGVRAKVLYDQPPEFFRPALLEERHELFCRVRKDLCHPIGVYDFISRELENQELNE 239
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
T+FT+ D+ LK NRPALVVSSTSWTPDE+FGILLEAA+MYDRRVAA S E
Sbjct: 240 TLFTTKFNADISLKQNRPALVVSSTSWTPDENFGILLEAAVMYDRRVAA-----RSKGSE 294
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
EIS+ +Q+ YP LLFIITGKGP+KE YEEKI+RL L+ VAFRTMWL+AEDYPLLLG
Sbjct: 295 T--AEISE-EQHHYPNLLFIITGKGPEKEMYEEKIKRLNLRHVAFRTMWLAAEDYPLLLG 351
Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC+VSYSCI+ELVK KNGLLFSSSSELAD
Sbjct: 352 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCSVSYSCIQELVKDGKNGLLFSSSSELAD 411
Query: 421 QLLVN 425
QLLV+
Sbjct: 412 QLLVS 416
|
|
| ZFIN|ZDB-GENE-030131-6093 alg1 "asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 8.1e-87, Sum P(2) = 8.1e-87
Identities = 115/284 (40%), Positives = 165/284 (58%)
Query: 8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTI 67
CV+VLGD+GRSPRMQY ALSL++ V ++ + G+KPH ILE I I +++
Sbjct: 58 CVLVLGDIGRSPRMQYHALSLSKH-GYNVTIIGFLGTKPHQDILEDDRIDILPISEL--- 113
Query: 68 PRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW-ASSLR 126
+G +Q F LL+ L + I L+QNPP +P +AV W AS +R
Sbjct: 114 -KGLTVGPRIFRYISKVTLQSFQLLYVL-MTIEDQGYILMQNPPGLPA-IAVTWMASRIR 170
Query: 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG 186
+ FI+DWHN+GYT+++LS G V + +W EK +G +++ LCVT AM+ +L +NW
Sbjct: 171 GNQFIIDWHNYGYTIMALSHGENHLIVRLAKWYEKIFGCLSDHNLCVTSAMREDLCKNWN 230
Query: 187 IKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT-- 244
I+AT LYD+PP F T L+ +HELF R+ + P V+ + + T FT
Sbjct: 231 IEATTLYDKPPSIFRETPLKLQHELFVRMGSA-YLPFRPSSAVTK----EYMELTAFTER 285
Query: 245 -SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
+ G V RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 286 NTQTGA-VTRSAGRPALLISSTSWTEDEDFSVLLQALEEYEKFV 328
|
|
| UNIPROTKB|E1BRK4 ALG1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 3.1e-85, Sum P(2) = 3.1e-85
Identities = 112/284 (39%), Positives = 163/284 (57%)
Query: 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW 64
GR CV VLGDLGRSPRMQY ALSLAR V ++ Y ++PH +L I + +++
Sbjct: 30 GRVCVAVLGDLGRSPRMQYHALSLARH-GRGVALLGYFQTRPHRDVLSSGEIRVVPLSEL 88
Query: 65 PTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS 124
+ G Q LL+ + +++ P L+QNPP +P+ +AV W +
Sbjct: 89 RCLRVGPKLFQYVVKVVA----QTVQLLYTM-LRMDPPSYVLLQNPPGLPS-IAVAWVAC 142
Query: 125 LR-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
L RS I+DWHN+GYT++SL+ GR V I +W EK +G++++ LCVT AM+ +L
Sbjct: 143 LFWRSKLIIDWHNYGYTIMSLNHGRNHPLVLIAKWYEKLFGRLSDYNLCVTDAMKEDLWV 202
Query: 184 NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243
N IKA LYD+P +F T LE +H+L+ +L K ++P S +++ T
Sbjct: 203 NCNIKAVTLYDRPASYFKETPLELQHQLYLKLAKD-YEPFKPHT-ESVSWNAERSAFTER 260
Query: 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
+G DV RPAL++SSTSWT DEDF +LL+A Y++ V
Sbjct: 261 DEKSG-DVIKSRGRPALLISSTSWTEDEDFSVLLKALEDYEQYV 303
|
|
| FB|FBgn0038552 CG18012 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 502 (181.8 bits), Expect = 3.5e-84, Sum P(2) = 3.5e-84
Identities = 115/291 (39%), Positives = 160/291 (54%)
Query: 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62
++ ACV+VLGD+GRSPRMQY A SL + + VD++ Y ++P + +HP IH +T
Sbjct: 7 KKRNACVIVLGDIGRSPRMQYHAQSLLEE-NYHVDMIGYLETRPLEELTQHPRCRIHELT 65
Query: 63 QWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWA 122
P Q LL L + I P LVQNPP +PTL+
Sbjct: 66 AVPV-----TNLTPKLRLLFKAFWQTLSLLMAL-ISIGRPSFLLVQNPPGIPTLIVCYLY 119
Query: 123 SSLRRSAFIVDWHNFGYTLLSLSL--GRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
++ R+ +DWHN+ YT+L+L + G +S + + R +E+Y+G A+ CVT+AMQ +
Sbjct: 120 CAVTRTKLAIDWHNYTYTVLALGMSKGEQSPLIRLVRRLERYFGSKAHTHFCVTRAMQED 179
Query: 181 LAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239
L QNWGI VLYD+ P FHP L KHEL+ +L K Q +D + + +
Sbjct: 180 LQQNWGIGPVKVLYDRAPAQFHPIDLTHKHELYLKLAKDYPQ-FQAKDAEQSDV----LE 234
Query: 240 ETIFTS-LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAA 289
T T LA V +P R A++VSSTSWTPDEDFGILL+A Y+ A
Sbjct: 235 ATALTQKLASGVVQYRPQRQAVLVSSTSWTPDEDFGILLKALQAYEETAQA 285
|
|
| UNIPROTKB|F1RKX2 LOC100524193 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 472 (171.2 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
Identities = 115/303 (37%), Positives = 169/303 (55%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGDLGRSPRMQY ALSLA+ V ++ + S+P +L+ I I +
Sbjct: 33 GRASRHVMVVVLGDLGRSPRMQYHALSLAKN-GFSVTLLGFCNSRPREELLQSDRIQIVS 91
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
+T+ P + G Q LLW L + + +FL QNPP +P +AV
Sbjct: 92 LTELPRLTVGPHILQYGVKVV----FQAVHLLWKLMCRDPAAYIFL-QNPPGLPA-IAVC 145
Query: 121 W-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
W A+ L S ++DWHN+GY+++ L G V + +W EK G++++ LCVT AM+
Sbjct: 146 WFAACLCGSKLVIDWHNYGYSIMGLVHGPGHRLVLLAKWYEKLCGRLSHLNLCVTNAMRE 205
Query: 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILH------QPLGVQDCVSNGM 233
+LA+NWGIKA +YD+P FF T L+ +H+LF +L++I +P + D +
Sbjct: 206 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFMKLSRIYSVFRARSEPSDL-DMERSAF 264
Query: 234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293
+ A + T L G RPAL+VSSTSWT DEDF +LL A +++ ++N+
Sbjct: 265 TERDAQSAVVTHLHG--------RPALLVSSTSWTEDEDFSVLLAALEKFEQ----LIND 312
Query: 294 DDS 296
+S
Sbjct: 313 GES 315
|
|
| UNIPROTKB|Q9BT22 ALG1 "Chitobiosyldiphosphodolichol beta-mannosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 469 (170.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 112/290 (38%), Positives = 162/290 (55%)
Query: 3 RRGRAC----VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHI 58
RRGRA VVLGD+GRSPRMQY ALSLA V ++ + SKPH +L++ I I
Sbjct: 27 RRGRAARHVVAVVLGDVGRSPRMQYHALSLAMH-GFSVTLLGFCNSKPHDELLQNNRIQI 85
Query: 59 HTMTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVA 118
+T+ ++ G +Q LLW L + +FL QNPP +P+ +A
Sbjct: 86 VGLTELQSLAVGPRVFQYGVKVV----LQAMYLLWKLMWREPGAYIFL-QNPPGLPS-IA 139
Query: 119 VKW-ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177
V W L S ++DWHN+GY+++ L G V + +W EK++G++++ LCVT AM
Sbjct: 140 VCWFVGCLCGSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAM 199
Query: 178 QHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237
+ +LA NW I+A +YD+P FF T L+ +H LF +L +H P + + E
Sbjct: 200 REDLADNWHIRAVTVYDKPASFFKETPLDLQHRLFMKLGS-MHSPFRAR----SEPEDPV 254
Query: 238 ADETIFTSL-AGIDVFLK-PNRPALVVSSTSWTPDEDFGILLEAALMYDR 285
+ + FT AG + + RPAL+VSSTSWT DEDF ILL A +++
Sbjct: 255 TERSAFTERDAGSGLVTRLRERPALLVSSTSWTEDEDFSILLAALEKFEQ 304
|
|
| UNIPROTKB|F1N2J7 ALG1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.5e-81, Sum P(2) = 2.5e-81
Identities = 116/291 (39%), Positives = 164/291 (56%)
Query: 2 GRRGR-ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
GR R VVVLGD+GRSPRMQY ALSLA+ V ++ + SKPH +L+ I I
Sbjct: 29 GRTARHVIVVVLGDVGRSPRMQYHALSLAKS-GFSVTLLGFCNSKPHDELLQSDKIQIVG 87
Query: 61 MTQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLW-FLCVKIASPDVFLVQNPPSVPTLVAV 119
+T + G Q LLW +C + A+ +FL QNPP +P +V
Sbjct: 88 LTDLQRLAVGPHVLQYGVKVV----FQAVHLLWKLMCTEPAAY-IFL-QNPPGLPAIVVC 141
Query: 120 KWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179
+A LR S +VDWHN+GY+++ L G V + +W EK G++++ LCVT AM+
Sbjct: 142 WFAGCLRGSKLVVDWHNYGYSIMGLVHGPSHPLVLLAKWYEKLCGRLSHLNLCVTNAMRD 201
Query: 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239
+LA+NWGIKA +YD+P FF T L+ +H+LF +L+ P+ + C + G +
Sbjct: 202 DLAENWGIKAVTVYDKPASFFKETPLDLQHQLFVKLSHTY--PV-FRACSESSDPG--TE 256
Query: 240 ETIFT---SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRV 287
+ FT +L+G L RPAL+VSSTSWT DEDF ILL A ++ +
Sbjct: 257 RSAFTERDALSGAVTHLC-GRPALLVSSTSWTEDEDFSILLAALEKFEHLI 306
|
|
| MGI|MGI:2384774 Alg1 "asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 465 (168.7 bits), Expect = 4.0e-81, Sum P(2) = 4.0e-81
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L++ I I +
Sbjct: 30 GRARHMVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQNDRIRIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRMDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVGCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTNAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
LA+NW ++A LYD+P FF T L+ +HELF +L+ + P Q C + + +++
Sbjct: 203 LAENWCVRAVTLYDKPASFFKETPLDLQHELFMKLSHT-YSPF--QSCSDPSHPDTERSA 259
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
T +G+ V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDCQSGV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
|
| RGD|1310700 Alg1 "ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 463 (168.0 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + + +++
Sbjct: 203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
|
| UNIPROTKB|D4A5S6 Alg1 "Protein Alg1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 463 (168.0 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 110/287 (38%), Positives = 161/287 (56%)
Query: 2 GRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTM 61
GR VVVLGD+GRSPRMQY ALSLA Q V ++ + SKP +L+ I I +
Sbjct: 30 GRARHVVVVVLGDVGRSPRMQYHALSLA-QSGFSVTLLGFYNSKPRDELLQSDRIQIVKL 88
Query: 62 TQWPTIPRGXXXXXXXXXXXXXXXIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKW 121
T RG Q LLW + + +FL QNPP +P +AV W
Sbjct: 89 TDL----RGLGAGPRILQYGVKVVFQAVYLLWKMMRTDPAAYIFL-QNPPGLPA-IAVCW 142
Query: 122 -ASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
+ S ++DWHN+GY+++ L G R V + +W EK++G++++ LCVT AM+ +
Sbjct: 143 FVCCICGSKLVIDWHNYGYSIMGLVHGPRHPIVLLAKWYEKFFGRLSHLNLCVTHAMRED 202
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVS-NGMEGQKAD 239
LA+NW ++A LYD+P FF T L+ +HELF +L++ + P Q C + + +++
Sbjct: 203 LAENWCLRAVTLYDKPASFFKETPLDLQHELFMKLSRT-YSPF--QSCSEPSDPDTERSA 259
Query: 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286
T S + + V RPAL+VSSTSWT DEDF ILL A ++++
Sbjct: 260 FTERDSQSRV-VRRLHGRPALLVSSTSWTEDEDFSILLRALEKFEQQ 305
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P16661 | ALG1_YEAST | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3497 | 0.8594 | 0.8173 | yes | no |
| Q9BT22 | ALG1_HUMAN | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4379 | 0.9063 | 0.8340 | yes | no |
| Q6FLZ2 | ALG1_CANGA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3364 | 0.8454 | 0.8022 | yes | no |
| Q6CVU2 | ALG1_KLULA | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3317 | 0.8524 | 0.8143 | yes | no |
| O13933 | ALG1_SCHPO | 2, ., 4, ., 1, ., 1, 4, 2 | 0.3905 | 0.8290 | 0.8349 | yes | no |
| Q5R7A2 | ALG1_PONAB | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4342 | 0.9086 | 0.8362 | yes | no |
| Q921Q3 | ALG1_MOUSE | 2, ., 4, ., 1, ., 1, 4, 2 | 0.4312 | 0.9133 | 0.8091 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.766 |
| 4th Layer | 2.4.1.142 | 0.824 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 427 | |||
| PLN02275 | 371 | PLN02275, PLN02275, transferase, transferring glyc | 0.0 | |
| cd03816 | 415 | cd03816, GT1_ALG1_like, This family is most closel | 0.0 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 9e-13 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 9e-11 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-09 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 2e-09 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-09 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-07 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 2e-06 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 4e-06 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 5e-05 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 2e-04 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 4e-04 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 5e-04 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 5e-04 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 0.001 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 0.001 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 0.002 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 0.003 |
| >gnl|CDD|215155 PLN02275, PLN02275, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 687 bits (1775), Expect = 0.0
Identities = 293/423 (69%), Positives = 315/423 (74%), Gaps = 55/423 (13%)
Query: 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60
MGRRGRA VVVLGD GRSPRMQY ALSLARQ S +VDVVAYGGS+P A+L HPSIHIH
Sbjct: 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHL 60
Query: 61 MTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVK 120
M Q P + + LP+VL + LLLK IQF MLLWFLCVKI PDVFLVQNPPSVPTL VK
Sbjct: 61 MVQ-PRLLQRLPRVLYALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVK 119
Query: 121 WASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180
A LRR+ F++DWHNFGYTLL+LSLGR V +YRW E++YGKMA+G LCVT+AMQHE
Sbjct: 120 LACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179
Query: 181 LAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240
L QNWGI+ATVLYDQPPEFF P SLE
Sbjct: 180 LDQNWGIRATVLYDQPPEFFRPASLE---------------------------------- 205
Query: 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEE 300
+ L+PNRPALVVSSTSWTPDEDFGILLEAA+MYDRRVAA LNE DS
Sbjct: 206 ----------IRLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDS---- 251
Query: 301 VFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360
+ GKQ LYPRLLFIITGKGP K YEEKI RL L+ VAFRTMWL AEDYPLLLG
Sbjct: 252 ------ASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLG 305
Query: 361 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
SADLGV LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI ELVK KNGLLFSSSSELAD
Sbjct: 306 SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFSSSSELAD 365
Query: 421 QLL 423
QLL
Sbjct: 366 QLL 368
|
Length = 371 |
| >gnl|CDD|99986 cd03816, GT1_ALG1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 544 bits (1404), Expect = 0.0
Identities = 216/422 (51%), Positives = 267/422 (63%), Gaps = 50/422 (11%)
Query: 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ 63
R R CV+VLGD+GRSPRMQY ALSLA+ +VD+V Y + PH IL +P+I IH +
Sbjct: 3 RKRVCVLVLGDIGRSPRMQYHALSLAK-HGWKVDLVGYLETPPHDEILSNPNITIHPL-- 59
Query: 64 WPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWAS 123
P P+ L K+ + LK L QFF LLW L K+ D L+QNPPS+PTL+
Sbjct: 60 -PPPPQRLNKLPFLLFAPLKVLWQFFSLLWLL-YKLRPADYILIQNPPSIPTLLIAWLYC 117
Query: 124 SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183
LRR+ I+DWHN+GYT+L+L LG V + +W EK +G++A+ LCVT+AM+ +L Q
Sbjct: 118 LLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ 177
Query: 184 --NWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADET 241
NW I+ATVLYD+PPE F P LEEKHELF +L K
Sbjct: 178 FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK----------------------TF 215
Query: 242 IFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
+ L V L RPAL+VSSTSWTPDEDFGILL+A + Y++ A
Sbjct: 216 LTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAA---TGPKL----- 267
Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
P+LL IITGKGP KE Y E+I+ L+LK+V RT WLSAEDYP LL S
Sbjct: 268 -------------PKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLAS 314
Query: 362 ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQ 421
ADLGV LHTSSSGLDLPMKVVDMFGCGLPVCA+ + CI+ELVK +NGL+F S ELA+Q
Sbjct: 315 ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFGDSEELAEQ 374
Query: 422 LL 423
L+
Sbjct: 375 LI 376
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. Length = 415 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 9e-13
Identities = 83/426 (19%), Positives = 146/426 (34%), Gaps = 94/426 (22%)
Query: 14 DLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS------IHIHTMTQW-PT 66
G + R A L ++ EV V+ + P I + + +H P
Sbjct: 13 LGGGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVH----RVPL 67
Query: 67 IPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR 126
P +LK +L L L L + PDV + +PP + +A + L+
Sbjct: 68 PPYKKNGLLKRLLNYLS---FALSALLALLKRRRRPDVIIATSPP-LLIALAALLLARLK 123
Query: 127 RSAFIVDWHN-FGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQN 184
+ F+++ + + + ++L L + + R +E+ + A+ + ++ M+ E
Sbjct: 124 GAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMR-EYLVR 182
Query: 185 WGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT 244
G+ KI + NG D +F
Sbjct: 183 RGVPP--------------------------EKIS--------VIPNG-----VDLELFK 203
Query: 245 SLAGIDVFLKPNRPA---LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301
+ K +V+ + + + LLEAA A+L +
Sbjct: 204 PPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAA--------ALLKD-------- 247
Query: 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361
P + F+I G GP+KE +E + L L V F + E+ P LL +
Sbjct: 248 ------------RPDIRFLIVGDGPEKEELKELAKALGLDNVTF-LGRVPKEELPELLAA 294
Query: 362 ADLGVC--LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSS--SSE 417
AD+G+ + P K+ + G PV A ELV+ GL+
Sbjct: 295 ADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEA 354
Query: 418 LADQLL 423
LA +L
Sbjct: 355 LAAAIL 360
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 9e-11
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 312 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHT 370
P + +I G GP++E EE R L L RV F T ++ E+ P +ADL V
Sbjct: 229 KEEPDVKLVIVGDGPEREELEELARELGLADRVIF-TGFVPREELPDYYKAADLFV--FA 285
Query: 371 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVNAL 427
S++ + +++ GLPV AV + +LV +NG LF E + L+ L
Sbjct: 286 STTET-QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEALLRLL 341
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 1e-09
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
P L +I G GP++E EE + L L RV F E LLL +AD+ V S
Sbjct: 133 GPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFV---LPS 189
Query: 373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412
+ V++ CGLPV A E+V+ GLL
Sbjct: 190 LREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 2e-09
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 300 EVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359
L+E + P + I G GP++ + RL V F ED LL
Sbjct: 18 LWLLEEALPLLRKALPDVELHIIGSGPEE------LARL-APNVHFLGFV---EDLAALL 67
Query: 360 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 419
SAD+ + +G P+K+++ GLPV A + L+ E A
Sbjct: 68 ASADVALAPLRFGAGS--PLKLLEALAAGLPVVATDIGAEGLPEDLGWGVLVADDPEEFA 125
Query: 420 DQLL 423
+ ++
Sbjct: 126 EAIV 129
|
Length = 134 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 58.4 bits (140), Expect = 2e-09
Identities = 68/385 (17%), Positives = 125/385 (32%), Gaps = 81/385 (21%)
Query: 47 HAAILEHPSIHIHTMTQWPTIPRGLPKV---LKPVLLLLKPLIQFFMLLWFLCVKIASPD 103
A L + + G+ + + LL+ L + L L ++ D
Sbjct: 26 KALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYD 85
Query: 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEK 161
+ + P + L +V H +L L + + + ++K
Sbjct: 86 IIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKK 145
Query: 162 YYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQ 221
+A+ + V+ A++ L NKI+
Sbjct: 146 ALRLLADRVIAVSPALKELLEALGVP----------------------------NKIVVI 177
Query: 222 PLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAAL 281
P G+ D F + A I + + + ++ P++ +L+EAA
Sbjct: 178 PNGI-------------DTEKF-APARIGLLPEGGKFVVLYVGR-LDPEKGLDLLIEAAA 222
Query: 282 MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEKIRRLRL 340
+R P + +I G GP++ E E+ ++L L
Sbjct: 223 KLKKR---------------------------GPDIKLVIVGDGPERREELEKLAKKLGL 255
Query: 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400
+ ++ E+ LL SAD V + S S + +++ G PV A I
Sbjct: 256 EDNVKFLGYVPDEELAELLASAD--VFVLPSLSE-GFGLVLLEAMAAGTPVIASDVGGIP 312
Query: 401 ELVKVDKNGLLF--SSSSELADQLL 423
E+V+ + GLL ELAD L
Sbjct: 313 EVVEDGETGLLVPPGDVEELADALE 337
|
Length = 381 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-07
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 13/116 (11%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
YP + +I G GP +E E L L RV F ++ ED P L +AD V + S
Sbjct: 228 YPDVRLVIVGDGPLREELEALAAELGLGDRVTF-LGFVPDEDLPALYAAAD--VFVLPSL 284
Query: 373 S-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLL 423
G + +++ GLPV V+ I E+V+ + GLL LA+ +L
Sbjct: 285 YEG--FGLVLLEAMAAGLPV--VASDVGGIPEVVEDGETGLLVPPGDPEALAEAIL 336
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 31/201 (15%)
Query: 21 MQYQALSLARQMSL---EVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
+ L LAR ++ EV V+ G + +
Sbjct: 16 AERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGGIVVVR--------------PPPL 61
Query: 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
+ + L+ L ++ DV + ++ L ++ H
Sbjct: 62 LRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAAR---LLGIPLVLTVHGL 118
Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLY- 193
+ LG R +E+ + A+ + V++A + EL + G+ K TV+
Sbjct: 119 EFGRPGNELGLLLKL---ARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPN 175
Query: 194 --DQPPEFFHPTSLEEKHELF 212
D E F P + L
Sbjct: 176 GVD--TERFRPAPRAARRRLG 194
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 4e-06
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
P + +I G GP +E+ E L L RV F + E+ P +AD+ L +
Sbjct: 231 RPDVHLVIVGDGPLREALEALAAELGLEDRVTF-LGAVPHEEVPAYYAAADV-FVLPSLR 288
Query: 373 SGLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLL 423
G + +++ CGLPV V+ I E++ +NGLL LA+ +L
Sbjct: 289 EG--FGLVLLEAMACGLPV--VATDVGGIPEIITDGENGLLVPPGDPEALAEAIL 339
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 5e-05
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 373
+P L +I G G +++ ++ +L L+ ++ ED L ADL V S
Sbjct: 31 HPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIFVGFVPDEDLIELYRIADLFV--LPSRY 88
Query: 374 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLL 423
+ +++ G+PV A E+VK + GLL LA+ +
Sbjct: 89 E-GFGLVLLEAMAAGVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIE 139
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 28/172 (16%)
Query: 21 MQYQALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77
+ L LAR ++ EV VV G P LE + +H + P R
Sbjct: 3 AERYVLELARALAARGHEVTVVTPRGP-PGRPELEEDGVRVHRL---PVPRRPSL----- 53
Query: 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137
L+ L + LL + PDV P + + + A+ R +V H
Sbjct: 54 -PGDLRALRRLRRLL-----RRERPDVVHAHGPLA---GLLARLAARRRGVPVVVTPHGL 104
Query: 138 GYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKA 189
S R + R +E+ + A+ + V++A L G+ A
Sbjct: 105 ALRQGSGLKRR------LARALERRLLRRADAVVAVSEAEAELLRA-LGVPA 149
|
Length = 158 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE--DYPLLLGSADLGVCLHTSS 372
RL +I G GP + + E+ +R L + WL E D P L+ + DL V S
Sbjct: 228 ERLRLVIVGDGPARGACEQMVRAAGLAHLV----WLPGERDDVPALMQALDLFV---LPS 280
Query: 373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLL 423
+ +++ GLPV A + ELV+ G L LA L
Sbjct: 281 LAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 42/209 (20%), Positives = 69/209 (33%), Gaps = 24/209 (11%)
Query: 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL 75
G ++ A +LA++ +EV V+A G P L + L K
Sbjct: 15 GGGIFVKELARALAKR-GVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGP 73
Query: 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWH 135
LL + L++ L F PD+ + P A +V H
Sbjct: 74 LLYLLAARALLKLLKLKRF------RPDLIHAHF--AYPDGFAAALLKRKLGIPLVVTLH 125
Query: 136 NFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY 193
LL + R + + + A+ + V++A+ EL K TV+
Sbjct: 126 GSDVNLLP--------RKRLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIP 177
Query: 194 ---DQPPEFFHPTSLEEKHELFCRLNKIL 219
D E F P E +L +K +
Sbjct: 178 NGVD--TERFSPADRAEARKLGLPEDKKV 204
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 314 YPRLLFIITGKG-PDKESYE----EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC 367
+P + ++ G+ PD E Y RL L RV F +L E+ P L +AD+ V
Sbjct: 214 HPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADV-VV 272
Query: 368 L-----HTSSSGLDLPMKVVDM-FGCGLPVCAVSYSCIEELVKVDKNGLL--FSSSSELA 419
L + SG V+ G G PV + EE++ GLL + LA
Sbjct: 273 LPYRSADQTQSG------VLAYAIGFGKPVISTPVGHAEEVLD-GGTGLLVPPGDPAALA 325
Query: 420 DQLL 423
+ +
Sbjct: 326 EAIR 329
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 315 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLH--TS 371
RL+ I G GP + E R L L RV F + L+ A + T+
Sbjct: 220 VRLVII--GDGPLLAALEALARALGLGGRVTFLG-AQPHAEVRELMRRARI-FLQPSVTA 275
Query: 372 SSGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLL 423
SG D LP+ +++ G+PV A + I E V+ + GLL + LA L
Sbjct: 276 PSG-DAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALG 331
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.001
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 321 ITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGV--CLHTSSSGLD- 376
I G GP ++ E I L L RV S E+ LL +ADL V + + +
Sbjct: 215 IVGDGPLRDELEALIAELGLEDRVTL-LGAKSQEEVRELLRAADLFVLPSVTAADGDREG 273
Query: 377 LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411
LP+ +++ GLPV + S I ELV+ + GLL
Sbjct: 274 LPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLL 308
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 319 FIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLD 376
I G GP++E+ E I+ L L RV + E+Y A + L TS G
Sbjct: 212 LRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEY---YAKASI-FVL-TSRFEG-- 264
Query: 377 LPMKVVDMFGCGLPVCAVSYSC---IEELVKVDKNGLLF--SSSSELADQLL 423
PM +++ GLPV +S+ C E+++ NGLL LA+ LL
Sbjct: 265 FPMVLLEAMAFGLPV--ISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALL 314
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.003
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 366 VCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQL 422
+ L+ S M+V + CG P+ +EEL + + +L+ ELA++L
Sbjct: 1 IVLNPSRRD-SPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEELAEKL 56
|
Length = 92 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 427 | |||
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 100.0 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.98 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.98 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.98 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.98 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.98 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.98 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.98 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.98 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.98 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.97 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.97 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.97 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.97 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.97 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.97 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| PLN00142 | 815 | sucrose synthase | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.97 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.97 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.96 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.96 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.96 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.94 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.93 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.92 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.91 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.89 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.87 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.86 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.84 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.84 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.84 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.82 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.81 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.8 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.8 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.78 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.78 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.74 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.72 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.71 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.71 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.71 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.68 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.63 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.59 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.52 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.52 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.43 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.4 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.32 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.32 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 99.24 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.22 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.21 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.2 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 99.16 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 99.16 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.15 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.15 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.09 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.87 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.78 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.71 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.63 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.63 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.57 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.56 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.54 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.4 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.38 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.33 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.31 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 98.03 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.01 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 97.94 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 97.91 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 97.88 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.8 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.79 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.79 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.77 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 97.77 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 97.76 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.66 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.56 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 97.46 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 97.45 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 97.42 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 97.29 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.28 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 97.24 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.22 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.22 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 97.21 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.19 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 97.08 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 96.71 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.67 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.51 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.45 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 96.16 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 96.16 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 96.14 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 95.95 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 95.91 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 95.82 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 95.78 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 95.45 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 95.41 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 95.35 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 95.29 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 95.2 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 94.91 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 94.81 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 94.61 | |
| PLN02208 | 442 | glycosyltransferase family protein | 94.23 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 94.22 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 93.93 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 93.79 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 92.91 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 92.39 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 91.93 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 89.98 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 88.31 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 87.93 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 87.73 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 87.1 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 86.45 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 86.04 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 85.91 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 85.49 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 83.15 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 82.87 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 82.56 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 82.1 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 80.22 |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-59 Score=445.26 Aligned_cols=391 Identities=55% Similarity=0.912 Sum_probs=344.3
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
|.++++++|+|+||+||||||+|||++||+. |++|++++|.++.+..+..++++|++|.++ ..+ .....++.+..
T Consensus 9 ~~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~-gf~VdliGy~~s~p~e~l~~hprI~ih~m~--~l~--~~~~~p~~~~l 83 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGDVGRSPRMQYHALSLAKL-GFQVDLIGYVESIPLEELLNHPRIRIHGMP--NLP--FLQGGPRVLFL 83 (444)
T ss_pred ccccceEEEEEecccCCChHHHHHHHHHHHc-CCeEEEEEecCCCChHHHhcCCceEEEeCC--CCc--ccCCCchhhhh
Confidence 3568999999999999999999999999997 999999999999889999999999999999 332 23445666778
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchh-hhhhhcCCCchHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLSLSLGRRSHFVSIYRWI 159 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ 159 (427)
++|.++|++.++|+++. ...+|++.++|||++|+++++++++.++|.++++||||++|+ .+..+.+..+++.++.+|+
T Consensus 84 ~lKvf~Qfl~Ll~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~ 162 (444)
T KOG2941|consen 84 PLKVFWQFLSLLWALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWL 162 (444)
T ss_pred HHHHHHHHHHHHHHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHH
Confidence 99999999999999887 689999999999999999999999999999999999999997 7778888999999999999
Q ss_pred HHHHhccCCEEEEcCHHHHHHHHHhhCC-eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 160 EKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 160 e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
|++++|.||+.+|||++|++++.++||+ ++.|+|+.+++ ++++.+++|++|+++..-.. |. .++ -.+.+..
T Consensus 163 E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps--~~~~l~~~H~lf~~l~~d~~-~f--~ar---~~q~~~~ 234 (444)
T KOG2941|consen 163 EKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS--KPTPLDEQHELFMKLAGDHS-PF--RAR---EPQDKAL 234 (444)
T ss_pred HHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCC--CCCchhHHHHHHhhhccccc-hh--hhc---ccccchh
Confidence 9999999999999999999999999996 69999999776 77888899999999874211 00 000 1123334
Q ss_pred cchhhhcccc-cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCE
Q 014316 239 DETIFTSLAG-IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (427)
Q Consensus 239 ~~~~~~~~~~-~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
+.++|+.+.. ..+...+++|.+++.+.+|+|++++..|++|+..+.+. -+.+.-++|++
T Consensus 235 ~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~--------------------~~~~~~~lP~l 294 (444)
T KOG2941|consen 235 ERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQ--------------------LYDKTHNLPSL 294 (444)
T ss_pred hhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhh--------------------hhhccCCCCcE
Confidence 4556766544 55667888999999999999999999999999987543 12234468999
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.++|.|+||.++.+.+.++++++++|.+...|++.||++.+++.||++||+|++|++.++|||+++++.||+||+|.+..
T Consensus 295 lciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk 374 (444)
T KOG2941|consen 295 LCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK 374 (444)
T ss_pred EEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 398 CIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
++.|+|+|++||++|+|.++||++|..+
T Consensus 375 cl~ELVkh~eNGlvF~Ds~eLa~ql~~l 402 (444)
T KOG2941|consen 375 CLDELVKHGENGLVFEDSEELAEQLQML 402 (444)
T ss_pred hHHHHHhcCCCceEeccHHHHHHHHHHH
Confidence 9999999999999999999999998754
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-48 Score=393.12 Aligned_cols=370 Identities=79% Similarity=1.255 Sum_probs=288.6
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
|++++++.|++++++|..+|+..++..++++.+++|+|+|+.+.....+..+..++++++++. +.....+.+..+.+..
T Consensus 1 ~~~~~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~~~~~~~~~~~~~~~ 79 (371)
T PLN02275 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PRLLQRLPRVLYALAL 79 (371)
T ss_pred CCCccEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCC-cccccccccchHHHHH
Confidence 899999999999999999999999999999733589999998766566666777899999983 2222223334443334
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 160 (427)
+.+..+.+..++|.+..+..+||+||+|+|+.+...+.+++++++.+.|+|+++|+.++........+...+.++++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 159 (371)
T PLN02275 80 LLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYE 159 (371)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHH
Confidence 55555555666666555668999999999887777676888888899999999999844332222223455567889999
Q ss_pred HHHhccCCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
+++++.+|.++++|+.+++.+.+.++.++.+|||++.+.|.+.... +
T Consensus 160 ~~~~~~ad~ii~~S~~~~~~l~~~~g~~i~vi~n~~~~~f~~~~~~---~------------------------------ 206 (371)
T PLN02275 160 RHYGKMADGHLCVTKAMQHELDQNWGIRATVLYDQPPEFFRPASLE---I------------------------------ 206 (371)
T ss_pred HHHHhhCCEEEECCHHHHHHHHHhcCCCeEEECCCCHHHcCcCCch---h------------------------------
Confidence 9999999999999999999998777777889999965556543210 0
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
....+.+.+++++||+.+.||++.+++|+..+..+.+...+.++ ..++.....|+++|+
T Consensus 207 -----------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~----------~~~~~~~~~~~i~l~ 265 (371)
T PLN02275 207 -----------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESD----------SASGKQSLYPRLLFI 265 (371)
T ss_pred -----------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccccc----------ccccccccCCCeEEE
Confidence 11122345788999999999999999999988643211111000 000111235789999
Q ss_pred EEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc
Q 014316 321 ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 321 i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~ 400 (427)
|+|+|+.+++++++++++++++|.|.++|++.++++.+|++||++|+|..++.+|++|++++||||||+|||+|+.||.+
T Consensus 266 ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~ 345 (371)
T PLN02275 266 ITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG 345 (371)
T ss_pred EEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence 99999999999999999999999998877999999999999999998654455699999999999999999999999999
Q ss_pred cceecCCcEEEeCChHHHHHHHHHh
Q 014316 401 ELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 401 e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
|+|+++.+|++++++++||++|.++
T Consensus 346 eiv~~g~~G~lv~~~~~la~~i~~l 370 (371)
T PLN02275 346 ELVKDGKNGLLFSSSSELADQLLEL 370 (371)
T ss_pred HHccCCCCeEEECCHHHHHHHHHHh
Confidence 9999999999999999999999875
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=378.99 Aligned_cols=375 Identities=56% Similarity=0.940 Sum_probs=283.6
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHH
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 82 (427)
+++|+++++++++|...|+.+++.+|+++ ||+|+|+|+.......+.....|++++.++ ..+ ....+..+.+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~-G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~~~~~~~~~~~~~ 77 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKH-GWKVDLVGYLETPPHDEILSNPNITIHPLP--PPP-QRLNKLPFLLFAPL 77 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhc-CceEEEEEecCCCCCHHHhcCCCEEEEECC--CCc-cccccchHHHHHHH
Confidence 57899999999999999999999999996 999999998765534343556799999998 322 11223344444555
Q ss_pred HHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHH
Q 014316 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKY 162 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~ 162 (427)
+.+.+++.+++.++. ..+||+||+|+|+.++..+++++++++.+.|+|+++|++.++......+....+.+++.++|++
T Consensus 78 ~~~~~~~~~~~~l~~-~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~ 156 (415)
T cd03816 78 KVLWQFFSLLWLLYK-LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKL 156 (415)
T ss_pred HHHHHHHHHHHHHHh-cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHH
Confidence 555555555555443 4689999999988887777788888888999999999985444333333345556788999999
Q ss_pred HhccCCEEEEcCHHHHHHHHHhhCC---eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCcc
Q 014316 163 YGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (427)
+++.+|.++|+|+.+++++.+ ++. ++.+|||++...|.|.+.......+..+.. .+. .
T Consensus 157 ~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~~~f~p~~~~~~~~~~~~~~~-~~~-----------------~ 217 (415)
T cd03816 157 FGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK-TFL-----------------T 217 (415)
T ss_pred HhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCHHHceeCcHHHHHHHHHhccc-ccc-----------------c
Confidence 999999999999999999976 443 389999997666766643322221111000 000 0
Q ss_pred chhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE
Q 014316 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (427)
... ........++++.+++++||+.+.||++.|++|++.+.+.... ....|+++|
T Consensus 218 ~~~----~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~---------------------~~~~~~i~l 272 (415)
T cd03816 218 REL----RIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT---------------------GPKLPKLLC 272 (415)
T ss_pred ccc----ccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc---------------------cccCCCEEE
Confidence 000 0000122334556888999999999999999999998753000 012478999
Q ss_pred EEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 320 IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 320 ~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
+|+|+|+.++++++++++++++++.|.++|++.++++++|++||++++|+.++.+|++|++++||||||+|||+|+.||.
T Consensus 273 ~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~ 352 (415)
T cd03816 273 IITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCI 352 (415)
T ss_pred EEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCH
Confidence 99999999999999999999998887765699999999999999999765555678999999999999999999999999
Q ss_pred ccceecCCcEEEeCChHHHHHHHHHhc
Q 014316 400 EELVKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 400 ~e~v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
.|+++++.+|++++|++++|++|.++.
T Consensus 353 ~eiv~~~~~G~lv~d~~~la~~i~~ll 379 (415)
T cd03816 353 DELVKHGENGLVFGDSEELAEQLIDLL 379 (415)
T ss_pred HHHhcCCCCEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999998763
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=307.60 Aligned_cols=311 Identities=14% Similarity=0.128 Sum_probs=225.3
Q ss_pred CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCC-CCCcchhhHHHHHHHHHHHHHHHH
Q 014316 15 LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-RGLPKVLKPVLLLLKPLIQFFMLL 92 (427)
Q Consensus 15 ~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 92 (427)
.|+..+ +...+..|+++ ||+|+|+|...+..........+++++++|...... ..+......+..+.+.+
T Consensus 13 ~GG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l~~~~------- 84 (398)
T cd03796 13 LGGVETHIYQLSQCLIKR-GHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLLRNIL------- 84 (398)
T ss_pred cccHHHHHHHHHHHHHHc-CCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHHHHHH-------
Confidence 444444 45567788885 999999997543222222234589999998321100 01111111112222222
Q ss_pred HHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEE
Q 014316 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (427)
Q Consensus 93 ~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 172 (427)
+..+||+||+|++..... ..+.++++..++|+|++.|+. +. ..........+++++..+.+|.+++
T Consensus 85 -----~~~~~DiIh~~~~~~~~~-~~~~~~~~~~~~~~v~t~h~~-~~-------~~~~~~~~~~~~~~~~~~~~d~ii~ 150 (398)
T cd03796 85 -----IRERITIVHGHQAFSALA-HEALLHARTMGLKTVFTDHSL-FG-------FADASSIHTNKLLRFSLADVDHVIC 150 (398)
T ss_pred -----HhcCCCEEEECCCCchHH-HHHHHHhhhcCCcEEEEeccc-cc-------ccchhhHHhhHHHHHhhccCCEEEE
Confidence 237899999998543322 225566778899999999986 21 1111112234566777889999999
Q ss_pred cCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 173 VTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 173 vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
+|+..++.+....+. ++.+|||| |.+.|.+...
T Consensus 151 ~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~------------------------------------------- 187 (398)
T cd03796 151 VSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPS------------------------------------------- 187 (398)
T ss_pred ecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcc-------------------------------------------
Confidence 999998876443343 38899999 6665644320
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
. ..++.++++|+||+.+.||++.|++|++.+.+. .|+++|+++|+|+..
T Consensus 188 ---~-~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~ 236 (398)
T cd03796 188 ---K-RDNDKITIVVISRLVYRKGIDLLVGIIPEICKK---------------------------HPNVRFIIGGDGPKR 236 (398)
T ss_pred ---c-CCCCceEEEEEeccchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEeCCchH
Confidence 0 112345899999999999999999999998775 789999999999999
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 329 ~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
+.+++++++++++ +|.|+|. ++.+++.++|++||++++| |..|++|++++||||||+|||+|++||.+|++.++.
T Consensus 237 ~~l~~~~~~~~l~~~v~~~G~-~~~~~~~~~l~~ad~~v~p---S~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~ 312 (398)
T cd03796 237 ILLEEMREKYNLQDRVELLGA-VPHERVRDVLVQGHIFLNT---SLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDM 312 (398)
T ss_pred HHHHHHHHHhCCCCeEEEeCC-CCHHHHHHHHHhCCEEEeC---ChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCc
Confidence 9999999999995 6999997 9999999999999999997 777999999999999999999999999999998765
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
.++...|.++++++|.++
T Consensus 313 ~~~~~~~~~~l~~~l~~~ 330 (398)
T cd03796 313 ILLAEPDVESIVRKLEEA 330 (398)
T ss_pred eeecCCCHHHHHHHHHHH
Confidence 444337889999998865
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=306.19 Aligned_cols=340 Identities=17% Similarity=0.191 Sum_probs=237.1
Q ss_pred eEEEEEe---CCCCCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCc-----------ccccCCCceEEEEeecCCCCCCC
Q 014316 6 RACVVVL---GDLGRSP-RMQYQALSLARQMSLEVDVVAYGGSKPH-----------AAILEHPSIHIHTMTQWPTIPRG 70 (427)
Q Consensus 6 ~~~v~~~---~~~~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~~-----------~~~~~~~~i~v~~~~~~~~~~~~ 70 (427)
+++++.. .+.|+.+ ++...+..|.++ ||+|+|+|.....+. ......+|+++++++.+.. ..
T Consensus 2 kIlii~~~~~P~~~g~~~~~~~l~~~L~~~-G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~--~~ 78 (412)
T PRK10307 2 KILVYGINYAPELTGIGKYTGEMAEWLAAR-GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVP--KQ 78 (412)
T ss_pred eEEEEecCCCCCccchhhhHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCC--CC
Confidence 4555553 3334333 455677888886 999999996532110 0112246999999984321 11
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC--
Q 014316 71 LPKVLKPVLLLLKPLIQFFMLLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-- 147 (427)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-- 147 (427)
.....+.... ..+... .+..+..+ ..+||+||+|+|+.... ..+.+++++.++|+++++||+.. ......+
T Consensus 79 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~Div~~~~p~~~~~-~~~~~~~~~~~~~~v~~~~d~~~-~~~~~~~~~ 152 (412)
T PRK10307 79 PSGLKRLLHL-GSFALS---SFFPLLAQRRWRPDRVIGVVPTLFCA-PGARLLARLSGARTWLHIQDYEV-DAAFGLGLL 152 (412)
T ss_pred ccHHHHHHHH-HHHHHH---HHHHHhhccCCCCCEEEEeCCcHHHH-HHHHHHHHhhCCCEEEEeccCCH-HHHHHhCCc
Confidence 1111111111 111111 11111111 26899999998664433 33677888889999999999833 2211111
Q ss_pred CCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCC
Q 014316 148 RRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPL 223 (427)
Q Consensus 148 ~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 223 (427)
+...+.++..++|+++++.||.++++|+.+++.+.+. +. ++.+|||| +.+.|.+........+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~--------- 222 (412)
T PRK10307 153 KGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADADVDALRAQ--------- 222 (412)
T ss_pred cCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCccchHHHHHH---------
Confidence 2344456677889999999999999999999998764 43 38899999 7666655432111121111
Q ss_pred CccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhh
Q 014316 224 GVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFL 303 (427)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~ 303 (427)
.+.+. +..+++|+|++.+.||++.|++|++.+.+
T Consensus 223 ---------------------------~~~~~-~~~~i~~~G~l~~~kg~~~li~a~~~l~~------------------ 256 (412)
T PRK10307 223 ---------------------------LGLPD-GKKIVLYSGNIGEKQGLELVIDAARRLRD------------------ 256 (412)
T ss_pred ---------------------------cCCCC-CCEEEEEcCccccccCHHHHHHHHHHhcc------------------
Confidence 12333 34589999999999999999999998743
Q ss_pred hhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC----Cch
Q 014316 304 KEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD----LPM 379 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~----~p~ 379 (427)
.++++|+|+|+|+..++++++++++++++|.|+|. ++.+++.++|++||++++| |..|+ +|+
T Consensus 257 ----------~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~-~~~~~~~~~~~~aDi~v~p---s~~e~~~~~~p~ 322 (412)
T PRK10307 257 ----------RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPL-QPYDRLPALLKMADCHLLP---QKAGAADLVLPS 322 (412)
T ss_pred ----------CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCC-CCHHHHHHHHHhcCEeEEe---eccCcccccCcH
Confidence 57899999999999999999999999989999997 9999999999999999997 33344 799
Q ss_pred HHHHHHcCCCcEEEeccCc--cccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 380 KVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 380 ~~lEama~G~PVIas~~~g--~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
+++||||||+|||+|+.+| ..|++. ++|+++ +|+++||++|.++.
T Consensus 323 kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~ 371 (412)
T PRK10307 323 KLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA 371 (412)
T ss_pred HHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999876 468886 699999 67899999998763
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=298.11 Aligned_cols=325 Identities=20% Similarity=0.229 Sum_probs=233.9
Q ss_pred cceEEEEEeCCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHH
Q 014316 4 RGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~-~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 82 (427)
++.++|+...+.||.+++.. .+..|.++ ||+++|++........+.....|+++++++. ... ........+.
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~--~~~----~~~~~~~~l~ 74 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPAD-RYRHAVVALTEVSAFRKRIQRPDVAFYALHK--QPG----KDVAVYPQLY 74 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhcccc-ccceEEEEcCCCChhHHHHHhcCceEEEeCC--CCC----CChHHHHHHH
Confidence 45666766677777766543 35566664 8999999865433333444456899998872 111 1222223333
Q ss_pred HHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcE-EEEecccchhhhhhhcCCCchHHHHHHHHHH
Q 014316 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 161 (427)
+.+.+ .+||+||+|++ .+.. +.++++..++|. +++.|+... . ........+.++++
T Consensus 75 ~~l~~------------~~~Divh~~~~---~~~~-~~~~~~~~~~~~~i~~~h~~~~--~-----~~~~~~~~~~~~~~ 131 (374)
T TIGR03088 75 RLLRQ------------LRPDIVHTRNL---AALE-AQLPAALAGVPARIHGEHGRDV--F-----DLDGSNWKYRWLRR 131 (374)
T ss_pred HHHHH------------hCCCEEEEcch---hHHH-HHHHHHhcCCCeEEEeecCccc--c-----cchhhHHHHHHHHH
Confidence 33332 79999999983 3322 445566667775 455565421 0 11111223456777
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
++.+.+|.++++|+.+++.+.+.++.+ +.+|||| +.+.|.+..... ......
T Consensus 132 ~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~-~~~~~~----------------------- 187 (374)
T TIGR03088 132 LYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDR-SPILPP----------------------- 187 (374)
T ss_pred HHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccch-hhhhHh-----------------------
Confidence 788889999999999999998877653 7899999 777775542111 110000
Q ss_pred ccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCE
Q 014316 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (427)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
....+++.+++++||+.++||++.+++|++.+.++... ..+++
T Consensus 188 --------------~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~-----------------------~~~~~ 230 (374)
T TIGR03088 188 --------------DFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPE-----------------------GAERL 230 (374)
T ss_pred --------------hcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcc-----------------------cccce
Confidence 11223456999999999999999999999998765100 02479
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 318 LFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
+|+++|+|+..+++++.+++++++ +|.|.|. .+++.++|++||++|+| |..|+||++++|||+||+|||+|+.
T Consensus 231 ~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---S~~Eg~~~~~lEAma~G~Pvv~s~~ 304 (374)
T TIGR03088 231 RLVIVGDGPARGACEQMVRAAGLAHLVWLPGE---RDDVPALMQALDLFVLP---SLAEGISNTILEAMASGLPVIATAV 304 (374)
T ss_pred EEEEecCCchHHHHHHHHHHcCCcceEEEcCC---cCCHHHHHHhcCEEEec---cccccCchHHHHHHHcCCCEEEcCC
Confidence 999999999999999999999996 6899887 88999999999999997 7789999999999999999999999
Q ss_pred CccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 397 SCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 397 ~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
||.+|++.++.+|+++ +|++++|++|.++
T Consensus 305 ~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l 335 (374)
T TIGR03088 305 GGNPELVQHGVTGALVPPGDAVALARALQPY 335 (374)
T ss_pred CCcHHHhcCCCceEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999 5789999999865
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=303.82 Aligned_cols=326 Identities=19% Similarity=0.240 Sum_probs=225.3
Q ss_pred cceEEEEEe-CCCCCCh----hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCC-CCcchhhH
Q 014316 4 RGRACVVVL-GDLGRSP----RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPR-GLPKVLKP 77 (427)
Q Consensus 4 ~~~~~v~~~-~~~~~~~----r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~~~~~~~ 77 (427)
+++|++++. ..+...+ ++...+..|.++ ||+|+|+|.....+ + ...+++++.++.++.+.. ........
T Consensus 58 ~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~-G~eV~vlt~~~~~~--~--~~~g~~v~~~~~~~~~~~~~~~~~~~~ 132 (465)
T PLN02871 58 PRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM-GDEVLVVTTDEGVP--Q--EFHGAKVIGSWSFPCPFYQKVPLSLAL 132 (465)
T ss_pred CceEEEEECCcCCcccccHHHHHHHHHHHHHHC-CCeEEEEecCCCCC--c--cccCceeeccCCcCCccCCCceeeccC
Confidence 455665553 3232223 455566777775 99999999765431 1 123666665542211111 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHH
Q 014316 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
...+.+.+ +..+||+||+|+|... .+.+.++++..++|+|+++|+.. ....... ....+.+...
T Consensus 133 ~~~l~~~i------------~~~kpDiIh~~~~~~~--~~~~~~~ak~~~ip~V~~~h~~~-~~~~~~~-~~~~~~~~~~ 196 (465)
T PLN02871 133 SPRIISEV------------ARFKPDLIHASSPGIM--VFGALFYAKLLCVPLVMSYHTHV-PVYIPRY-TFSWLVKPMW 196 (465)
T ss_pred CHHHHHHH------------HhCCCCEEEECCCchh--HHHHHHHHHHhCCCEEEEEecCc-hhhhhcc-cchhhHHHHH
Confidence 01122222 2379999999985422 23355567778999999999862 2111111 1112222234
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhh---CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM 233 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (427)
.+++++.+.+|.++++|+.+++.+.+.+ ..++.+++|| |.+.|.+.... .+...++.
T Consensus 197 ~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~--~~~~~~~~----------------- 257 (465)
T PLN02871 197 DIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRS--EEMRARLS----------------- 257 (465)
T ss_pred HHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCcccc--HHHHHHhc-----------------
Confidence 5678888999999999999999998764 2348899999 87777654311 11111110
Q ss_pred CCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccC
Q 014316 234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 313 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (427)
...+++ .+|+|+||+.++||++.|+++++.
T Consensus 258 ------------------~~~~~~-~~i~~vGrl~~~K~~~~li~a~~~------------------------------- 287 (465)
T PLN02871 258 ------------------GGEPEK-PLIVYVGRLGAEKNLDFLKRVMER------------------------------- 287 (465)
T ss_pred ------------------CCCCCC-eEEEEeCCCchhhhHHHHHHHHHh-------------------------------
Confidence 112233 489999999999999999999876
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
.++++|+|+|+|++.+++++++++. +|.|+|. ++.+++.++|++||++|+| |..|++|++++||||||+|||+
T Consensus 288 ~~~~~l~ivG~G~~~~~l~~~~~~~---~V~f~G~-v~~~ev~~~~~~aDv~V~p---S~~E~~g~~vlEAmA~G~PVI~ 360 (465)
T PLN02871 288 LPGARLAFVGDGPYREELEKMFAGT---PTVFTGM-LQGDELSQAYASGDVFVMP---SESETLGFVVLEAMASGVPVVA 360 (465)
T ss_pred CCCcEEEEEeCChHHHHHHHHhccC---CeEEecc-CCHHHHHHHHHHCCEEEEC---CcccccCcHHHHHHHcCCCEEE
Confidence 4689999999999888888877643 6999998 9999999999999999997 7779999999999999999999
Q ss_pred eccCccccceec---CCcEEEe--CChHHHHHHHHHhc
Q 014316 394 VSYSCIEELVKV---DKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 394 s~~~g~~e~v~~---~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|+.||+.|++.+ +.+|+++ +|+++++++|.++.
T Consensus 361 s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll 398 (465)
T PLN02871 361 ARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL 398 (465)
T ss_pred cCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 999999999998 9999999 57899999998764
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=295.06 Aligned_cols=328 Identities=18% Similarity=0.148 Sum_probs=232.6
Q ss_pred CCChh-HHHHHHHHHhhCCCcEEEEecCCCCCc-ccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPR-MQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 16 ~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
||.++ +.+.+..|+++ ||+|+|+|....... ......+|+++++++. .+...... ......+..+... +++
T Consensus 20 GG~e~~v~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~-~~~~~~~~~~~~~---~~~ 92 (405)
T TIGR03449 20 GGMNVYILETATELARR-GIEVDIFTRATRPSQPPVVEVAPGVRVRNVVA--GPYEGLDK-EDLPTQLCAFTGG---VLR 92 (405)
T ss_pred CCceehHHHHHHHHhhC-CCEEEEEecccCCCCCCccccCCCcEEEEecC--CCcccCCH-HHHHHHHHHHHHH---HHH
Confidence 44433 45667788885 999999997543211 1222245999999872 21211111 0111111111111 111
Q ss_pred HHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC-CCchHHHHHHHHHHHHhccCCEEE
Q 014316 94 FLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYRWIEKYYGKMANGCL 171 (427)
Q Consensus 94 ~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi 171 (427)
..+.+ ..++|+||+|. ....++++++++..++|+|+++|+.. ........ ...+.....+++|+.+.+.+|.++
T Consensus 93 ~~~~~~~~~~Diih~h~---~~~~~~~~~~~~~~~~p~v~t~h~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi 168 (405)
T TIGR03449 93 AEARHEPGYYDLIHSHY---WLSGQVGWLLRDRWGVPLVHTAHTLA-AVKNAALADGDTPEPEARRIGEQQLVDNADRLI 168 (405)
T ss_pred HHhhccCCCCCeEEech---HHHHHHHHHHHHhcCCCEEEeccchH-HHHHHhccCCCCCchHHHHHHHHHHHHhcCeEE
Confidence 11221 24799999998 44455577778888999999999873 22111110 111222344567888889999999
Q ss_pred EcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 172 CVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
++|+...+.+.+.++.+ +.+|+|| +.+.|.+.+.. ....
T Consensus 169 ~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~---~~~~---------------------------------- 211 (405)
T TIGR03449 169 ANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRA---TERA---------------------------------- 211 (405)
T ss_pred ECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHH---HHHH----------------------------------
Confidence 99999998887776653 7899999 77777554211 1111
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC--EEEEEEeC-
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR--LLFIITGK- 324 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~G~- 324 (427)
++..+.+ +.+|+|+||+.+.||++.|++|++.+.++ .|+ ++|+|+|+
T Consensus 212 --~~~~~~~-~~~i~~~G~l~~~K~~~~li~a~~~l~~~---------------------------~~~~~~~l~ivG~~ 261 (405)
T TIGR03449 212 --RLGLPLD-TKVVAFVGRIQPLKAPDVLLRAVAELLDR---------------------------DPDRNLRVIVVGGP 261 (405)
T ss_pred --hcCCCCC-CcEEEEecCCCcccCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCC
Confidence 1123333 35899999999999999999999998765 555 99999995
Q ss_pred ---C-CChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 325 ---G-PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 325 ---G-~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
| +..++++++++++++. +|.|+|. ++.+++.++|+.||++++| |..|++|++++|||++|+|||+|+.||.
T Consensus 262 ~~~g~~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~l~~ad~~v~p---s~~E~~g~~~lEAma~G~Pvi~~~~~~~ 337 (405)
T TIGR03449 262 SGSGLATPDALIELAAELGIADRVRFLPP-RPPEELVHVYRAADVVAVP---SYNESFGLVAMEAQACGTPVVAARVGGL 337 (405)
T ss_pred CCCcchHHHHHHHHHHHcCCCceEEECCC-CCHHHHHHHHHhCCEEEEC---CCCCCcChHHHHHHHcCCCEEEecCCCc
Confidence 3 4567888999999985 7999997 9999999999999999997 7779999999999999999999999999
Q ss_pred ccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 400 EELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 400 ~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
.|++.++.+|+++ +|.++++++|.++
T Consensus 338 ~e~i~~~~~g~~~~~~d~~~la~~i~~~ 365 (405)
T TIGR03449 338 PVAVADGETGLLVDGHDPADWADALARL 365 (405)
T ss_pred HhhhccCCceEECCCCCHHHHHHHHHHH
Confidence 9999999999999 4889999998875
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=289.71 Aligned_cols=337 Identities=18% Similarity=0.232 Sum_probs=228.1
Q ss_pred EEEEEeCCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcc-cccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHA-AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~-~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
+.+......||++++ ...|.+|+++ ||+|+|+|...+.... ......++.++....+. +...+.+ ...+...
T Consensus 4 l~~~~~~~~gG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~----~~~~~~~ 77 (392)
T cd03805 4 AFIHPDLGIGGAERLVVDAALALQSR-GHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWL-PRSIFGR----FHILCAY 77 (392)
T ss_pred EEECCCCCCchHHHHHHHHHHHHHhC-CCeEEEEcCCCCchhcchhccCCeeEEEEEeEEE-cchhhHh----HHHHHHH
Confidence 334333356676665 6677888886 9999999975432111 11222235555554111 0111111 1111111
Q ss_pred HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCC-chHHHHHHHHHHHH
Q 014316 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVSIYRWIEKYY 163 (427)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~-~~~~~~~~~~e~~~ 163 (427)
+......++....+..++|+||+++ +.... .+.....+.|+++++|.... ......+.. ..+....+++|++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~Dvi~~~~---~~~~~--~~~~~~~~~~~i~~~h~~~~-~~~~~~~~~~~~~~~~~~~~e~~~ 151 (392)
T cd03805 78 LRMLYLALYLLLLPDEKYDVFIVDQ---VSACV--PLLKLFSPSKILFYCHFPDQ-LLAQRGSLLKRLYRKPFDWLEEFT 151 (392)
T ss_pred HHHHHHHHHHHhcccCCCCEEEEcC---cchHH--HHHHHhcCCcEEEEEecChH-HhcCCCcHHHHHHHHHHHHHHHHH
Confidence 2211111111123457999999987 32222 22333444899999994422 111100001 11233457889999
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCe----EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIK----ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~----~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
++.+|.++++|+.+++.+.+.++.. ..+|+|+ +.+.|.+.......+
T Consensus 152 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~---------------------------- 203 (392)
T cd03805 152 TGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPG---------------------------- 203 (392)
T ss_pred hhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCccccccccc----------------------------
Confidence 9999999999999999988766432 3489999 766665432110000
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC---C
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY---P 315 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 315 (427)
. ....++..+++++||+.+.||++.+++|++.+.++ . |
T Consensus 204 -----------~-~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~ 244 (392)
T cd03805 204 -----------L-LIPKSGKKTFLSINRFERKKNIALAIEAFAILKDK---------------------------LAEFK 244 (392)
T ss_pred -----------c-cccCCCceEEEEEeeecccCChHHHHHHHHHHHhh---------------------------ccccc
Confidence 0 11223345899999999999999999999999875 4 7
Q ss_pred CEEEEEEeCCCCh--------HHHHHHHHH-cCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH
Q 014316 316 RLLFIITGKGPDK--------ESYEEKIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 316 ~~~l~i~G~G~~~--------~~~~~~~~~-l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam 385 (427)
+++|+++|+|+.. +++++++++ ++++ +|.|+|. ++.+++..+|++||++++| |..|+||++++|||
T Consensus 245 ~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~-~~~~~~~~~l~~ad~~l~~---s~~E~~g~~~lEAm 320 (392)
T cd03805 245 NVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPS-ISDSQKELLLSSARALLYT---PSNEHFGIVPLEAM 320 (392)
T ss_pred CeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCC-CChHHHHHHHhhCeEEEEC---CCcCCCCchHHHHH
Confidence 8999999998753 678888888 8884 8999998 9999999999999999986 77799999999999
Q ss_pred cCCCcEEEeccCccccceecCCcEEEe-CChHHHHHHHHHhc
Q 014316 386 GCGLPVCAVSYSCIEELVKVDKNGLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 386 a~G~PVIas~~~g~~e~v~~~~~G~l~-~~~~~la~~l~~~~ 426 (427)
|||+|||+|+.||..|++.++.+|+++ .|+++++++|.++.
T Consensus 321 a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~ 362 (392)
T cd03805 321 YAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLA 362 (392)
T ss_pred HcCCCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999 67899999988653
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=287.90 Aligned_cols=242 Identities=19% Similarity=0.251 Sum_probs=189.6
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHh--hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~--~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
+..++|+||+|.. .....+.+++. ..+.|.++++|+.... .. .....++...+..++.+|.++++|+
T Consensus 115 ~~~~~diihaH~~---~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~-------~~-~~~~~~~~~~~~~~~~ad~vv~~S~ 183 (406)
T PRK15427 115 TPFVADVFIAHFG---PAGVTAAKLRELGVLRGKIATIFHGIDIS-------SR-EVLNHYTPEYQQLFRRGDLMLPISD 183 (406)
T ss_pred ccCCCCEEEEcCC---hHHHHHHHHHHhCCCCCCeEEEEcccccc-------cc-hhhhhhhHHHHHHHHhCCEEEECCH
Confidence 4468999999983 33333444444 2345778899986321 11 1111112233445678999999999
Q ss_pred HHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccc
Q 014316 176 AMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (427)
Q Consensus 176 ~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
..++.+.+ ++.+ +.++||| |.+.|.+..
T Consensus 184 ~~~~~l~~-~g~~~~ki~vi~nGvd~~~f~~~~----------------------------------------------- 215 (406)
T PRK15427 184 LWAGRLQK-MGCPPEKIAVSRMGVDMTRFSPRP----------------------------------------------- 215 (406)
T ss_pred HHHHHHHH-cCCCHHHEEEcCCCCCHHHcCCCc-----------------------------------------------
Confidence 99999876 4553 8899999 766664321
Q ss_pred ccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
....+.++.|+|+||+.+.||++.+++|++.+.++ .++++|.|+|+|+..+++
T Consensus 216 ~~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~ivG~G~~~~~l 268 (406)
T PRK15427 216 VKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQ---------------------------GVAFRYRILGIGPWERRL 268 (406)
T ss_pred cccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEECchhHHHH
Confidence 00122356899999999999999999999999876 688999999999999999
Q ss_pred HHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCC---CCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 332 EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 332 ~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s---~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
++++++++++ +|.|+|. ++.+++.++|+.||++|+|+... ..||+|++++||||||+|||+|++||++|++.++.
T Consensus 269 ~~~~~~~~l~~~V~~~G~-~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~ 347 (406)
T PRK15427 269 RTLIEQYQLEDVVEMPGF-KPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADK 347 (406)
T ss_pred HHHHHHcCCCCeEEEeCC-CCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCC
Confidence 9999999995 7999996 99999999999999999984321 13999999999999999999999999999999999
Q ss_pred cEEEe--CChHHHHHHHHHhc
Q 014316 408 NGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 408 ~G~l~--~~~~~la~~l~~~~ 426 (427)
+|+++ +|++++|++|.++.
T Consensus 348 ~G~lv~~~d~~~la~ai~~l~ 368 (406)
T PRK15427 348 SGWLVPENDAQALAQRLAAFS 368 (406)
T ss_pred ceEEeCCCCHHHHHHHHHHHH
Confidence 99999 57899999998764
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=291.16 Aligned_cols=329 Identities=19% Similarity=0.111 Sum_probs=212.9
Q ss_pred HHHHHHHHHhhCCC--cEEEEecCCCC------C-cccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 014316 21 MQYQALSLARQMSL--EVDVVAYGGSK------P-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (427)
Q Consensus 21 ~~~~a~~La~~~g~--~V~vi~~~~~~------~-~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
+...+..|+++ || +|+|+|..... . .......+|+++++++..+ ..... .......+..+...+.
T Consensus 32 v~~La~~L~~~-G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~--~~~~~-~~~~~~~~~~~~~~l~-- 105 (439)
T TIGR02472 32 VLELARALARR-SEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGP--RRYLR-KELLWPYLDELADNLL-- 105 (439)
T ss_pred HHHHHHHHHhC-CCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCC--CCCcC-hhhhhhhHHHHHHHHH--
Confidence 34455667775 87 99999953211 0 1111224699999998322 11111 0011111111111111
Q ss_pred HHHHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC----CCchHHHH---HH--HHHH
Q 014316 92 LWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG----RRSHFVSI---YR--WIEK 161 (427)
Q Consensus 92 ~~~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~----~~~~~~~~---~~--~~e~ 161 (427)
. .+.+ ..+||+||+|+ ....+++.++++..++|+|+|.|+...... .... ....+.+. .. ..|+
T Consensus 106 -~-~~~~~~~~~DvIH~h~---~~~~~~~~~~~~~~~~p~V~t~H~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (439)
T TIGR02472 106 -Q-HLRQQGHLPDLIHAHY---ADAGYVGARLSRLLGVPLIFTGHSLGREKR-RRLLAAGLKPQQIEKQYNISRRIEAEE 179 (439)
T ss_pred -H-HHHHcCCCCCEEEEcc---hhHHHHHHHHHHHhCCCEEEecccccchhh-hhcccCCCChhhhhhhcchHHHHHHHH
Confidence 1 1122 23799999998 345555777888889999999998643211 0000 00111111 11 2477
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhh-CC---eEEEecCC-CCCCcCCCChH-HHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNW-GI---KATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~-~~---~~~vi~n~-~~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
..++.+|.++++|..........+ +. ++.+|||| |.+.|.+.... ...++...+
T Consensus 180 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~-------------------- 239 (439)
T TIGR02472 180 ETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLL-------------------- 239 (439)
T ss_pred HHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHH--------------------
Confidence 888999999999976544332222 32 38899999 87777664311 111110000
Q ss_pred CCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC
Q 014316 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 315 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (427)
+.....+++ .+|+|+||+.+.||++.|++|++.+.+.. ..+
T Consensus 240 -------------~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~A~~~l~~~~-------------------------~~~ 280 (439)
T TIGR02472 240 -------------APFLKDPEK-PPILAISRPDRRKNIPSLVEAYGRSPKLQ-------------------------EMA 280 (439)
T ss_pred -------------HhhccccCC-cEEEEEcCCcccCCHHHHHHHHHhChhhh-------------------------hhc
Confidence 001222333 48999999999999999999998754210 023
Q ss_pred CEEEEEEeCCCChHH-----------HHHHHHHcCCC-cEEEecCCCCcccHHHHHhcC----cEEEeeccCCCCCCCch
Q 014316 316 RLLFIITGKGPDKES-----------YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPM 379 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~-----------~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~ 379 (427)
++. +++|+|++.+. +.++++++++. +|+|+|. ++.++++++|+.| |++|+| |..|+||+
T Consensus 281 ~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~-~~~~~~~~~~~~a~~~~Dv~v~p---S~~E~fg~ 355 (439)
T TIGR02472 281 NLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKH-HRPDDVPELYRLAARSRGIFVNP---ALTEPFGL 355 (439)
T ss_pred cEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCC-CCHHHHHHHHHHHhhcCCEEecc---cccCCccc
Confidence 443 36788875432 34456778885 7999997 8999999999987 999997 77899999
Q ss_pred HHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 380 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 380 ~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+++||||||+|||+|+.||++|++.++.+|+++ +|+++||++|.++
T Consensus 356 ~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~l 403 (439)
T TIGR02472 356 TLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDA 403 (439)
T ss_pred HHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999 6899999999875
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=281.18 Aligned_cols=322 Identities=19% Similarity=0.246 Sum_probs=224.8
Q ss_pred eEEEEEeCCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHH
Q 014316 6 RACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
+++++.....|+.+++ ...+..|+++ ||+|+|+|...+. ......+++.++.++. ............. ...+.
T Consensus 2 ki~~~~~p~~gG~~~~~~~la~~L~~~-G~~v~v~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~ 75 (371)
T cd04962 2 KIGIVCYPTYGGSGVVATELGKALARR-GHEVHFITSSRPF--RLDEYSPNIFFHEVEV--PQYPLFQYPPYDL-ALASK 75 (371)
T ss_pred ceeEEEEeCCCCccchHHHHHHHHHhc-CCceEEEecCCCc--chhhhccCeEEEEecc--cccchhhcchhHH-HHHHH
Confidence 4666667778877775 4566788886 9999999975432 1112234666654441 1000011000000 01111
Q ss_pred HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhh---cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHH
Q 014316 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL---RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (427)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~---~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 161 (427)
+. .++ +..+||+||+|.+. +....+.+..+. .++|+|+++|+..+... +.. ..++++++
T Consensus 76 l~-------~~i-~~~~~divh~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----~~~----~~~~~~~~ 137 (371)
T cd04962 76 IA-------EVA-KRYKLDLLHVHYAV--PHAVAAYLAREILGKKDLPVVTTLHGTDITLV----GQD----PSFQPATR 137 (371)
T ss_pred HH-------HHH-hcCCccEEeecccC--CccHHHHHHHHhcCcCCCcEEEEEcCCccccc----ccc----ccchHHHH
Confidence 11 111 33799999999732 222223333332 38999999997633111 111 12345667
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
...+.+|.++++|+.+++.+.+.++. ++.+++|+ +...|.+.... ....
T Consensus 138 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~---~~~~------------------------- 189 (371)
T cd04962 138 FSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDE---ALKR------------------------- 189 (371)
T ss_pred HHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchH---HHHH-------------------------
Confidence 77889999999999999988876543 38899999 65555433211 1000
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
+.+..++ ..+++++|++.+.||++.+++|+..+.++ ++++
T Consensus 190 -----------~~~~~~~-~~~il~~g~l~~~K~~~~li~a~~~l~~~----------------------------~~~~ 229 (371)
T cd04962 190 -----------RLGAPEG-EKVLIHISNFRPVKRIDDVIRIFAKVRKE----------------------------VPAR 229 (371)
T ss_pred -----------hcCCCCC-CeEEEEecccccccCHHHHHHHHHHHHhc----------------------------CCce
Confidence 1123333 35899999999999999999999998653 4589
Q ss_pred EEEEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 319 FIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 319 l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
|+++|+|++.+.+++.+++++++ +|.|.|. .+++.++|+.||++++| |..|++|++++|||+||+|||+|+.|
T Consensus 230 l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~v~p---s~~E~~~~~~~EAma~g~PvI~s~~~ 303 (371)
T cd04962 230 LLLVGDGPERSPAERLARELGLQDDVLFLGK---QDHVEELLSIADLFLLP---SEKESFGLAALEAMACGVPVVASNAG 303 (371)
T ss_pred EEEEcCCcCHHHHHHHHHHcCCCceEEEecC---cccHHHHHHhcCEEEeC---CCcCCCccHHHHHHHcCCCEEEeCCC
Confidence 99999999999999999999885 7999997 67899999999999997 67899999999999999999999999
Q ss_pred ccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 398 CIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 398 g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+..|++.++.+|+++ +|.++++++|.++
T Consensus 304 ~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l 333 (371)
T cd04962 304 GIPEVVKHGETGFLVDVGDVEAMAEYALSL 333 (371)
T ss_pred CchhhhcCCCceEEcCCCCHHHHHHHHHHH
Confidence 999999999999999 4789999998765
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=272.73 Aligned_cols=313 Identities=17% Similarity=0.153 Sum_probs=218.2
Q ss_pred CCCCChhH-HHHHHHHHhhCCCcEEEEecCCCC-CcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 014316 14 DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSK-PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (427)
Q Consensus 14 ~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~-~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
+.||.++. ...+.+|++ .||+|++++..... .........++++++++ .. .......+..+.+.+
T Consensus 10 ~~GG~~~~~~~l~~~L~~-~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~------ 76 (358)
T cd03812 10 NRGGIETFIMNYYRNLDR-SKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIP--AR----KKNPLKYFKKLYKLI------ 76 (358)
T ss_pred CCccHHHHHHHHHHhcCc-cceEEEEEEeCCCCcchHHHHHHcCCeEEEec--CC----CccHHHHHHHHHHHH------
Confidence 34444443 334455665 49999999976543 12223344577777765 21 111222222222222
Q ss_pred HHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcE-EEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEE
Q 014316 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC 170 (427)
Q Consensus 92 ~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 170 (427)
+..+||+||+|++. . ..+..+.++..+.|. +++.|+..+.. .........+++++++.+.+|.+
T Consensus 77 ------~~~~~Dvv~~~~~~--~-~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 141 (358)
T cd03812 77 ------KKNKYDIVHVHGSS--A-SGFILLAAKKAGVKVRIAHSHNTSDSH------DKKKKILKYKVLRKLINRLATDY 141 (358)
T ss_pred ------hcCCCCEEEEeCcc--h-hHHHHHHHhhCCCCeEEEEeccccccc------cccchhhHHHHHHHHHHhcCCEE
Confidence 23899999999844 2 222344444456664 66788774311 11111111156677888899999
Q ss_pred EEcCHHHHHHHHHhh-CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 171 LCVTQAMQHELAQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 171 i~vS~~~~~~l~~~~-~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
+++|+...+.+.+.. ..++.+|||+ |...|.+.... +.. ..
T Consensus 142 i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~-~~~-~~----------------------------------- 184 (358)
T cd03812 142 LACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEI-RKK-RR----------------------------------- 184 (358)
T ss_pred EEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCchh-hhH-HH-----------------------------------
Confidence 999999998886642 2348999999 66555443211 111 00
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
.... .++...|+|+||+.+.||++.+++|++.+.+. .++++|+|+|+|+..
T Consensus 185 -~~~~-~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~ 235 (358)
T cd03812 185 -ELGI-LEDKFVIGHVGRFSEQKNHEFLIEIFAELLKK---------------------------NPNAKLLLVGDGELE 235 (358)
T ss_pred -HcCC-CCCCEEEEEEeccccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchH
Confidence 0122 23446899999999999999999999999876 789999999999999
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 329 ~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
+.+++.+++++++ +|.|+|. .+++.++|+.||++|+| |..|++|++++||||+|+|||+|+.||.+|++.++.
T Consensus 236 ~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~~ 309 (358)
T cd03812 236 EEIKKKVKELGLEDKVIFLGV---RNDVPELLQAMDVFLFP---SLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDLV 309 (358)
T ss_pred HHHHHHHHhcCCCCcEEEecc---cCCHHHHHHhcCEEEec---ccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccCc
Confidence 9999999999885 8999997 88999999999999997 777999999999999999999999999999998844
Q ss_pred cEEEe-CChHHHHHHHHHhc
Q 014316 408 NGLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 408 ~G~l~-~~~~~la~~l~~~~ 426 (427)
.++.. ++++++|++|.++.
T Consensus 310 ~~~~~~~~~~~~a~~i~~l~ 329 (358)
T cd03812 310 KFLSLDESPEIWAEEILKLK 329 (358)
T ss_pred cEEeCCCCHHHHHHHHHHHH
Confidence 43333 44699999998864
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=278.12 Aligned_cols=327 Identities=17% Similarity=0.159 Sum_probs=217.8
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 014316 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (427)
Q Consensus 20 r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (427)
.+...|.+|+++ ||+|+++|........ . |+++++++..+........+..............+.....+..+.
T Consensus 12 ~~~~la~~L~~~-G~~v~~~~~~~~~~~~---~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
T cd03818 12 QFRHLAPALAAQ-GHEVVFLTEPNAAPPP---G--GVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRAKG 85 (396)
T ss_pred hHHHHHHHHHHC-CCEEEEEecCCCCCCC---C--CeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhcC
Confidence 456788999997 9999999987654222 1 799999883211111111111111111111112222233333344
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhc--C---CCch----HHHHHHHHHHHHhccCCEE
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL--G---RRSH----FVSIYRWIEKYYGKMANGC 170 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~--~---~~~~----~~~~~~~~e~~~~~~ad~v 170 (427)
.+||+||+|.-. ... ..+...+.++|+|...|-+ ++...... . ..+. ..+...++....++.+|.+
T Consensus 86 ~~pdvi~~h~~~--~~~--~~l~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 86 FRPDVIVAHPGW--GET--LFLKDVWPDAPLIGYFEFY-YRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred CCCCEEEECCcc--chh--hhHHHhCCCCCEEEEEeee-ecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 689999999722 111 1122233578888766533 21111000 0 0111 0111122345677899999
Q ss_pred EEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 171 LCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 171 i~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
|++|+.+++.+.+.++.++.+|||| |.+.|.+..... ... +.
T Consensus 161 i~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~~-~~~------------------------------------~~ 203 (396)
T cd03818 161 VSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQAR-LRL------------------------------------PN 203 (396)
T ss_pred ECCCHHHHhhCcHhhccceEEeCCCccccccCCCchhh-hcc------------------------------------cc
Confidence 9999999998877666679999999 877776653111 000 00
Q ss_pred ccccCCCCCeEEEEEee-cCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-
Q 014316 250 DVFLKPNRPALVVSSTS-WTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD- 327 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~-~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~- 327 (427)
.....+++ .+|+|+|| +.+.||++.|++|++.+.+. .|+++|+|+|++..
T Consensus 204 ~~~~~~~~-~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~lvivG~~~~~ 255 (396)
T cd03818 204 GRVLTPGD-EVITFVARNLEPYRGFHVFMRALPRLLRA---------------------------RPDARVVIVGGDGVS 255 (396)
T ss_pred cccCCCCC-eEEEEECCCcccccCHHHHHHHHHHHHHH---------------------------CCCcEEEEEcCCCcc
Confidence 00122333 48999997 99999999999999999876 78999999997421
Q ss_pred -------hH-HHHHHHHHcC----CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 328 -------KE-SYEEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 328 -------~~-~~~~~~~~l~----l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.+ ..++++++++ .++|.|+|. ++.+++.++|+.||++++| |..|++|++++||||||+|||+|+
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~-v~~~~~~~~l~~adv~v~~---s~~e~~~~~llEAmA~G~PVIas~ 331 (396)
T cd03818 256 YGAPPPDGESWKQHMLDELGGRLDLSRVHFLGR-VPYDQYLALLQVSDVHVYL---TYPFVLSWSLLEAMACGCLVVGSD 331 (396)
T ss_pred cCCCCCCcccHHHHHHHHhhcccCcceEEEeCC-CCHHHHHHHHHhCcEEEEc---CcccccchHHHHHHHCCCCEEEcC
Confidence 11 2333444443 468999998 9999999999999999997 778999999999999999999999
Q ss_pred cCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 396 YSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 396 ~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
.||.+|++.++.+|+++ +|++++|++|.++.
T Consensus 332 ~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll 364 (396)
T cd03818 332 TAPVREVITDGENGLLVDFFDPDALAAAVIELL 364 (396)
T ss_pred CCCchhhcccCCceEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999 57899999998763
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=293.42 Aligned_cols=247 Identities=19% Similarity=0.185 Sum_probs=184.7
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEE-EecccchhhhhhhcCCCchHHHHHHHHHHH-HhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKY-YGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~-~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~ad~vi~vS~~ 176 (427)
..+|||||+|+ ....+++.++++..++|+|+ ++|++.. .. ....+...+..+.+. ....++.++++|+.
T Consensus 398 ~~kpDIVH~h~---~~a~~lg~lAa~~~gvPvIv~t~h~~~~-~~-----~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~ 468 (694)
T PRK15179 398 SSVPSVVHIWQ---DGSIFACALAALLAGVPRIVLSVRTMPP-VD-----RPDRYRVEYDIIYSELLKMRGVALSSNSQF 468 (694)
T ss_pred HcCCcEEEEeC---CcHHHHHHHHHHHcCCCEEEEEeCCCcc-cc-----chhHHHHHHHHHHHHHHhcCCeEEEeCcHH
Confidence 47999999998 44455577888888999876 5676521 10 111122222222222 22234567777888
Q ss_pred HHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 177 MQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 177 ~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
.++.+.+.++.+ +.||||| |.+.|.+.+...... .++ . ..
T Consensus 469 ~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~--~~~----------------------------~------~~ 512 (694)
T PRK15179 469 AAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMM--AQF----------------------------D------AR 512 (694)
T ss_pred HHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHH--Hhh----------------------------c------cc
Confidence 888887766764 8999999 766665432111100 000 0 01
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
. ++..++|+++||+.+.||++.|++|++.+.+. .|+++|+|+|+|+..+.++
T Consensus 513 ~-~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~---------------------------~p~~~LvIvG~G~~~~~L~ 564 (694)
T PRK15179 513 T-SDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS---------------------------HPKVRFIMVGGGPLLESVR 564 (694)
T ss_pred c-CCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH---------------------------CcCeEEEEEccCcchHHHH
Confidence 1 22345899999999999999999999998876 7899999999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEE
Q 014316 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 333 ~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
+++++++++ +|.|+|. .+++..+|+.+|++|+| |..|+||++++||||||+|||+|++||.+|+|.++.+|++
T Consensus 565 ~l~~~lgL~~~V~flG~---~~dv~~ll~aaDv~Vlp---S~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlL 638 (694)
T PRK15179 565 EFAQRLGMGERILFTGL---SRRVGYWLTQFNAFLLL---SRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLT 638 (694)
T ss_pred HHHHHcCCCCcEEEcCC---cchHHHHHHhcCEEEec---cccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEE
Confidence 999999995 8999998 67899999999999997 7789999999999999999999999999999999999999
Q ss_pred eC--C--hHHHHHHHHH
Q 014316 412 FS--S--SSELADQLLV 424 (427)
Q Consensus 412 ~~--~--~~~la~~l~~ 424 (427)
++ | +++++++|.+
T Consensus 639 v~~~d~~~~~La~aL~~ 655 (694)
T PRK15179 639 LPADTVTAPDVAEALAR 655 (694)
T ss_pred eCCCCCChHHHHHHHHH
Confidence 93 4 3577777654
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=275.77 Aligned_cols=246 Identities=23% Similarity=0.245 Sum_probs=195.0
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
+..+||+||+|... ....+..+++..++|+++++|+........ ...... .+.+..+++.+.+.+|.++++|+.+
T Consensus 79 ~~~~~dvvh~~~~~---~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 79 RRHRPDLVHAHFGF---DGVYALPLARRLGVPLVVTFHGFDATTSLA-LLLRSR-WALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HhhCCCEEEeccCc---hHHHHHHHHHHcCCCEEEEEeCccccccch-hhcccc-hhHHHHHHHHHHHhcCEEEECCHHH
Confidence 34799999999732 233355567778999999999763211110 000011 3345667788889999999999999
Q ss_pred HHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 178 QHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 178 ~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
++.+.+. +.+ +.+++|+ +.+.|.+..
T Consensus 154 ~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~~------------------------------------------------- 183 (367)
T cd05844 154 RDRLLAL-GFPPEKVHVHPIGVDTAKFTPAT------------------------------------------------- 183 (367)
T ss_pred HHHHHHc-CCCHHHeEEecCCCCHHhcCCCC-------------------------------------------------
Confidence 9998764 443 8899998 655553321
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
....+..++|+|++.+.||++.+++|++.+.++ .++++|+++|+|+..+++++
T Consensus 184 ~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~~~~~ 236 (367)
T cd05844 184 PARRPPRILFVGRFVEKKGPLLLLEAFARLARR---------------------------VPEVRLVIIGDGPLLAALEA 236 (367)
T ss_pred CCCCCcEEEEEEeeccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCchHHHHHHH
Confidence 111234899999999999999999999999876 78999999999998889999
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCC---CCCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s---~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
+++++++ ++|.|+|. ++.+++..+|+.||++++|...+ ..|++|++++||||||+|||+|+.++..|++.++.+|
T Consensus 237 ~~~~~~~~~~v~~~g~-~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g 315 (367)
T cd05844 237 LARALGLGGRVTFLGA-QPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETG 315 (367)
T ss_pred HHHHcCCCCeEEECCC-CCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCee
Confidence 9999888 48999998 99999999999999999973322 2499999999999999999999999999999999999
Q ss_pred EEe--CChHHHHHHHHHhc
Q 014316 410 LLF--SSSSELADQLLVNA 426 (427)
Q Consensus 410 ~l~--~~~~~la~~l~~~~ 426 (427)
+++ +|+++++++|.++.
T Consensus 316 ~~~~~~d~~~l~~~i~~l~ 334 (367)
T cd05844 316 LLVPEGDVAALAAALGRLL 334 (367)
T ss_pred EEECCCCHHHHHHHHHHHH
Confidence 999 47899999998764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=269.43 Aligned_cols=306 Identities=21% Similarity=0.243 Sum_probs=218.1
Q ss_pred CCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 014316 14 DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (427)
Q Consensus 14 ~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (427)
+.||.+++ ...+..|+++ ||+|++++.... ........+++++.++ ..... ..........+.+.+
T Consensus 8 ~~gG~e~~~~~l~~~L~~~-g~~v~v~~~~~~--~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~l~~~~------- 74 (355)
T cd03819 8 ESGGVERGTLELARALVER-GHRSLVASAGGR--LVAELEAEGSRHIKLP--FISKN-PLRILLNVARLRRLI------- 74 (355)
T ss_pred ccCcHHHHHHHHHHHHHHc-CCEEEEEcCCCc--hHHHHHhcCCeEEEcc--ccccc-hhhhHHHHHHHHHHH-------
Confidence 34555554 4456777775 999999986543 2233444588888777 22111 111111111111111
Q ss_pred HHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEE
Q 014316 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (427)
Q Consensus 93 ~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 172 (427)
+..+||+||+|++. ..+.+.++++..++|+++++|+. +.... ..+.+.+.+|.+++
T Consensus 75 -----~~~~~dii~~~~~~---~~~~~~~~~~~~~~~~i~~~h~~-~~~~~---------------~~~~~~~~~~~vi~ 130 (355)
T cd03819 75 -----REEKVDIVHARSRA---PAWSAYLAARRTRPPFVTTVHGF-YSVNF---------------RYNAIMARGDRVIA 130 (355)
T ss_pred -----HHcCCCEEEECCCc---hhHHHHHHHHhcCCCEEEEeCCc-hhhHH---------------HHHHHHHhcCEEEE
Confidence 23799999999832 23335566677799999999998 31110 22334567999999
Q ss_pred cCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 173 VTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 173 vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
+|+.+++.+.+.++.+ +.+|+|| +.+.|.+......... . .+
T Consensus 131 ~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~--~--------------------------------~~ 176 (355)
T cd03819 131 VSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERIL--A--------------------------------LA 176 (355)
T ss_pred eCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHH--H--------------------------------HH
Confidence 9999999998777653 8899999 7666654321111000 0 00
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
++... +++..+++|+||+.+.||++.+++|+..+.+. .++++++++|+|+..
T Consensus 177 ~~~~~-~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~---------------------------~~~~~l~ivG~~~~~ 228 (355)
T cd03819 177 REWPL-PKGKPVILLPGRLTRWKGQEVFIEALARLKKD---------------------------DPDVHLLIVGDAQGR 228 (355)
T ss_pred HHcCC-CCCceEEEEeeccccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEECCccc
Confidence 11122 23345899999999999999999999999875 678999999998765
Q ss_pred HHH----HHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCC-CCCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 329 ESY----EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 329 ~~~----~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
+.+ .+.++++++. +|.|+|. .+++.++|++||++++| | ..|++|++++||||||+|||+++.|+..|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~l~~ad~~i~p---s~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~ 302 (355)
T cd03819 229 RFYYAELLELIKRLGLQDRVTFVGH---CSDMPAAYALADIVVSA---STEPEAFGRTAVEAQAMGRPVIASDHGGARET 302 (355)
T ss_pred chHHHHHHHHHHHcCCcceEEEcCC---cccHHHHHHhCCEEEec---CCCCCCCchHHHHHHhcCCCEEEcCCCCcHHH
Confidence 443 4566777874 7999997 88999999999999997 6 569999999999999999999999999999
Q ss_pred eecCCcEEEe--CChHHHHHHHHH
Q 014316 403 VKVDKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 403 v~~~~~G~l~--~~~~~la~~l~~ 424 (427)
+.++.+|+++ +|.++++++|..
T Consensus 303 i~~~~~g~~~~~~~~~~l~~~i~~ 326 (355)
T cd03819 303 VRPGETGLLVPPGDAEALAQALDQ 326 (355)
T ss_pred HhCCCceEEeCCCCHHHHHHHHHH
Confidence 9999999998 678999999853
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=272.36 Aligned_cols=329 Identities=20% Similarity=0.197 Sum_probs=228.8
Q ss_pred CCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 16 GRSP-RMQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 16 ~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~~~~-~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
||.+ .+...+..|++. ||+|+|+|......... .....++.+++++. .+.....+. .....+...... +.
T Consensus 21 GG~~~~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~----~~ 92 (398)
T cd03800 21 GGQNVYVLELARALARL-GHEVDIFTRRIDDALPPIVELAPGVRVVRVPA--GPAEYLPKE-ELWPYLDEFADD----LL 92 (398)
T ss_pred CceeehHHHHHHHHhcc-CceEEEEEecCCcccCCccccccceEEEeccc--ccccCCChh-hcchhHHHHHHH----HH
Confidence 4444 346677888885 99999999654432221 23456899998873 211111110 001111111111 11
Q ss_pred HHHhhh-CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC-CCchHHHHHHHHHHHHhccCCEEE
Q 014316 94 FLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYRWIEKYYGKMANGCL 171 (427)
Q Consensus 94 ~~~~~~-~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi 171 (427)
..+.+. .+||+||+|. ....+.+..+++..++|+|++.|+... ....... ............|+.+.+.+|.++
T Consensus 93 ~~~~~~~~~~Div~~~~---~~~~~~~~~~~~~~~~~~i~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii 168 (398)
T cd03800 93 RFLRREGGRPDLIHAHY---WDSGLVALLLARRLGIPLVHTFHSLGA-VKRRHLGAADTYEPARRIEAEERLLRAADRVI 168 (398)
T ss_pred HHHHhcCCCccEEEEec---CccchHHHHHHhhcCCceEEEeecccc-cCCcccccccccchhhhhhHHHHHHhhCCEEE
Confidence 112221 2899999997 333344667777889999999998742 1110000 111012233466788889999999
Q ss_pred EcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 172 CVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
++|+..++.+.+.++.+ +.+|+|+ +.+.|.+...... . .
T Consensus 169 ~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~-~-~----------------------------------- 211 (398)
T cd03800 169 ASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEA-R-R----------------------------------- 211 (398)
T ss_pred EcCHHHHHHHHHHccccccccEEECCCCCccceecccchhh-H-H-----------------------------------
Confidence 99999999888766443 7899999 7666654321110 0 0
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 327 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~ 327 (427)
.......+ ..+|+|+||+.+.||++.+++|+..+.++ .++++|+++|+|+.
T Consensus 212 -~~~~~~~~-~~~i~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~~~~ 262 (398)
T cd03800 212 -ARLLRDPD-KPRILAVGRLDPRKGIDTLIRAYAELPEL---------------------------RERANLVIVGGPRD 262 (398)
T ss_pred -HhhccCCC-CcEEEEEcccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEECCCC
Confidence 00122233 35899999999999999999999999876 67899999998864
Q ss_pred h------HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc
Q 014316 328 K------ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 328 ~------~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~ 400 (427)
. ..++++++++++. +|.|+|. ++.+++..+++.||++++| |..|++|++++||||||+|||+++.+|..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adi~l~p---s~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~ 338 (398)
T cd03800 263 DILAMDEEELRELARELGVIDRVDFPGR-VSREDLPALYRAADVFVNP---ALYEPFGLTALEAMACGLPVVATAVGGPR 338 (398)
T ss_pred cchhhhhHHHHHHHHhcCCCceEEEecc-CCHHHHHHHHHhCCEEEec---ccccccCcHHHHHHhcCCCEEECCCCCHH
Confidence 3 3356677888884 8999997 9999999999999999997 77799999999999999999999999999
Q ss_pred cceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 401 ELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 401 e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|++.++.+|+++ +|+++++++|.++.
T Consensus 339 e~i~~~~~g~~~~~~~~~~l~~~i~~l~ 366 (398)
T cd03800 339 DIVVDGVTGLLVDPRDPEALAAALRRLL 366 (398)
T ss_pred HHccCCCCeEEeCCCCHHHHHHHHHHHH
Confidence 999999999999 47899999998763
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=281.78 Aligned_cols=269 Identities=15% Similarity=0.103 Sum_probs=184.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-----cCCcEEEEecccchhhhh-----hhcCCC-chH--HH--HH--HHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-----RRSAFIVDWHNFGYTLLS-----LSLGRR-SHF--VS--IY--RWIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-----~~~p~i~~~h~~~~~~~~-----~~~~~~-~~~--~~--~~--~~~e~~ 162 (427)
.+|||||+|. +.+.+++.+++.. .++|+|+|+|+..+.-.. ...+-. ..+ .. .+ ..+.+.
T Consensus 117 ~~pDiiH~h~---w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (466)
T PRK00654 117 PRPDIVHAHD---WHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKA 193 (466)
T ss_pred CCCceEEECC---cHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHH
Confidence 5899999998 5555556556543 379999999998652100 000000 000 00 00 123455
Q ss_pred HhccCCEEEEcCHHHHHHHHHh-h-----------CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccc
Q 014316 163 YGKMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 229 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (427)
..+.||.+++||+.+++++... + ..++.+|+|| |.+.|.|.....-...|..-
T Consensus 194 ~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~-------------- 259 (466)
T PRK00654 194 GLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSAD-------------- 259 (466)
T ss_pred HHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChh--------------
Confidence 6788999999999999888642 2 1248899999 88878764211000000000
Q ss_pred cCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCC
Q 014316 230 SNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 309 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (427)
..+ .+. . -+...+++++++.++..+|+++||+.++||++.|++|++.+.+.
T Consensus 260 --~~~-~k~--~-~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~----------------------- 310 (466)
T PRK00654 260 --DLE-GKA--E-NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ----------------------- 310 (466)
T ss_pred --hhh-chH--H-HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc-----------------------
Confidence 000 000 0 00012223344443344899999999999999999999998642
Q ss_pred cccCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcC
Q 014316 310 KQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 310 ~~~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~ 387 (427)
+++|+|+|+|+. .+.+++++++++. ++.+... .+.+.+..+|++||++|+| |..|+||++++|||+|
T Consensus 311 ------~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~g-~~~~~~~~~~~~aDv~v~P---S~~E~~gl~~lEAma~ 379 (466)
T PRK00654 311 ------GGQLVLLGTGDPELEEAFRALAARYPG-KVGVQIG-YDEALAHRIYAGADMFLMP---SRFEPCGLTQLYALRY 379 (466)
T ss_pred ------CCEEEEEecCcHHHHHHHHHHHHHCCC-cEEEEEe-CCHHHHHHHHhhCCEEEeC---CCCCCchHHHHHHHHC
Confidence 689999999863 4678888888763 5665444 3556678999999999998 8899999999999999
Q ss_pred CCcEEEeccCccccceecC------CcEEEe--CChHHHHHHHHHh
Q 014316 388 GLPVCAVSYSCIEELVKVD------KNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 388 G~PVIas~~~g~~e~v~~~------~~G~l~--~~~~~la~~l~~~ 425 (427)
|+|+|+|++||++|+|.++ .+|+++ +|+++|+++|.++
T Consensus 380 G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~ 425 (466)
T PRK00654 380 GTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRA 425 (466)
T ss_pred CCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999988 899999 5789999998764
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=272.77 Aligned_cols=306 Identities=20% Similarity=0.272 Sum_probs=212.8
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCCc
Q 014316 24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPD 103 (427)
Q Consensus 24 ~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 103 (427)
.+..|.+ .++|+|++..... ....++++++++ ... ........+... . ..+....+..++|
T Consensus 25 l~~~l~~--~~~v~v~~~~~~~-----~~~~~~~~~~~~--~~~--~~~~~~~~~~~~----~----~~~~~~~~~~~~d 85 (388)
T TIGR02149 25 LTRELAR--LMDVDVRCFGDQR-----FDSEGLTVKGYR--PWS--ELKEANKALGTF----S----VDLAMANDPVDAD 85 (388)
T ss_pred HHHHHHH--hcCeeEEcCCCch-----hcCCCeEEEEec--Chh--hccchhhhhhhh----h----HHHHHhhCCCCCC
Confidence 3445544 3789999876433 234588888887 211 111111111111 0 0111122335799
Q ss_pred EEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHH
Q 014316 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183 (427)
Q Consensus 104 vv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~ 183 (427)
+||+|+ ....+.+.+++++.++|+|+++|+... ..............+..++++...+.+|.++++|+.+++.+.+
T Consensus 86 ivh~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 86 VVHSHT---WYTFLAGHLAKKLYDKPLVVTAHSLEP-LRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred eEeecc---hhhhhHHHHHHHhcCCCEEEEeecccc-cccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 999998 333344666777789999999998731 1100000001112356788999999999999999999999887
Q ss_pred hh-CC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCC
Q 014316 184 NW-GI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (427)
Q Consensus 184 ~~-~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (427)
.+ +. ++.+|+|| +.+.|.+... .....+ ++.+.+.
T Consensus 162 ~~~~~~~~~i~vi~ng~~~~~~~~~~~---~~~~~~------------------------------------~~~~~~~- 201 (388)
T TIGR02149 162 YYPDLDPEKVHVIYNGIDTKEYKPDDG---NVVLDR------------------------------------YGIDRSR- 201 (388)
T ss_pred HcCCCCcceEEEecCCCChhhcCCCch---HHHHHH------------------------------------hCCCCCc-
Confidence 66 33 38899999 6666654321 111111 1333333
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH----HHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE----SYEEK 334 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~----~~~~~ 334 (427)
..|+|+||+.+.||++.|++|++.+. ++++++++|+|++.+ .+++.
T Consensus 202 ~~i~~~Grl~~~Kg~~~li~a~~~l~------------------------------~~~~l~i~g~g~~~~~~~~~~~~~ 251 (388)
T TIGR02149 202 PYILFVGRITRQKGVPHLLDAVHYIP------------------------------KDVQVVLCAGAPDTPEVAEEVRQA 251 (388)
T ss_pred eEEEEEcccccccCHHHHHHHHHHHh------------------------------hcCcEEEEeCCCCcHHHHHHHHHH
Confidence 48999999999999999999999874 257889998877644 34555
Q ss_pred HHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 335 IRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 335 ~~~l~l--~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
+++++. ++|.|.+++++.+++.++|++||++|+| |..|++|++++|||+||+|||+|+.||.+|++.++.+|+++
T Consensus 252 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~p---s~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~ 328 (388)
T TIGR02149 252 VALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCP---SIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV 328 (388)
T ss_pred HHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeC---CccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc
Confidence 566655 3588876669999999999999999997 77899999999999999999999999999999999999999
Q ss_pred --CCh------HHHHHHHHHh
Q 014316 413 --SSS------SELADQLLVN 425 (427)
Q Consensus 413 --~~~------~~la~~l~~~ 425 (427)
++. ++++++|.++
T Consensus 329 ~~~~~~~~~~~~~l~~~i~~l 349 (388)
T TIGR02149 329 PPDNSDADGFQAELAKAINIL 349 (388)
T ss_pred CCCCCcccchHHHHHHHHHHH
Confidence 455 7899998765
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=271.90 Aligned_cols=320 Identities=14% Similarity=0.128 Sum_probs=219.1
Q ss_pred ceEEEEEeCCCC----CChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 5 GRACVVVLGDLG----RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 5 ~~~~v~~~~~~~----~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
.++.+++...+. ..++++.+...+++..-++|+++|.............+|+.+++++........+.++.. + .
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 80 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSIPNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTR-L-D 80 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccCCeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhc-c-C
Confidence 345555554443 355778887888766557999999776542222245567888888610100000011000 0 0
Q ss_pred HHHHHHHHHHHHHHH-HhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFL-CVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWI 159 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 159 (427)
...+... ++..+ ..+..++|+||+|+ ..... ..+..+..+.|+++++|+. +..
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~vi~v~~---~~~~~-~~~~~~~~~~~~v~~~h~~-~~~------------------ 134 (380)
T PRK15484 81 PLPYSQR---ILNIAHKFTITKDSVIVIHN---SMKLY-RQIRERAPQAKLVMHMHNA-FEP------------------ 134 (380)
T ss_pred chhHHHH---HHHHHHhcCCCCCcEEEEeC---cHHhH-HHHHhhCCCCCEEEEEecc-cCh------------------
Confidence 1111111 11111 11225699999999 33222 4455666788999999987 310
Q ss_pred HHHHhccCCEEEEcCHHHHHHHHHhhCC-eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 160 EKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 160 e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
...+.++.++++|+.+++.+.+.++. ++.+|||| |.+.|.+.... ++..+
T Consensus 135 --~~~~~~~~ii~~S~~~~~~~~~~~~~~~i~vIpngvd~~~~~~~~~~---~~~~~----------------------- 186 (380)
T PRK15484 135 --ELLDKNAKIIVPSQFLKKFYEERLPNADISIVPNGFCLETYQSNPQP---NLRQQ----------------------- 186 (380)
T ss_pred --hHhccCCEEEEcCHHHHHHHHhhCCCCCEEEecCCCCHHHcCCcchH---HHHHH-----------------------
Confidence 11235799999999999988776543 48899999 76666543211 11111
Q ss_pred ccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCE
Q 014316 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (427)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
.+...+ ..+|+|+||+.+.||++.|++|++.+.++ .|++
T Consensus 187 -------------~~~~~~-~~~il~~Grl~~~Kg~~~Li~A~~~l~~~---------------------------~p~~ 225 (380)
T PRK15484 187 -------------LNISPD-ETVLLYAGRISPDKGILLLMQAFEKLATA---------------------------HSNL 225 (380)
T ss_pred -------------hCCCCC-CeEEEEeccCccccCHHHHHHHHHHHHHh---------------------------CCCe
Confidence 122233 35899999999999999999999999876 7899
Q ss_pred EEEEEeCCCCh-----H----HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcC
Q 014316 318 LFIITGKGPDK-----E----SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGC 387 (427)
Q Consensus 318 ~l~i~G~G~~~-----~----~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~ 387 (427)
+|+|+|+|+.. + .+++++++++ .+|.|+|. ++.+++.++|++||++|+| |. .|+||++++|||||
T Consensus 226 ~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~-~~v~~~G~-~~~~~l~~~~~~aDv~v~p---S~~~E~f~~~~lEAma~ 300 (380)
T PRK15484 226 KLVVVGDPTASSKGEKAAYQKKVLEAAKRIG-DRCIMLGG-QPPEKMHNYYPLADLVVVP---SQVEEAFCMVAVEAMAA 300 (380)
T ss_pred EEEEEeCCccccccchhHHHHHHHHHHHhcC-CcEEEeCC-CCHHHHHHHHHhCCEEEeC---CCCccccccHHHHHHHc
Confidence 99999998642 2 3444555555 47999998 8999999999999999997 65 49999999999999
Q ss_pred CCcEEEeccCccccceecCCcEEEe---CChHHHHHHHHHhc
Q 014316 388 GLPVCAVSYSCIEELVKVDKNGLLF---SSSSELADQLLVNA 426 (427)
Q Consensus 388 G~PVIas~~~g~~e~v~~~~~G~l~---~~~~~la~~l~~~~ 426 (427)
|+|||+|+.||.+|++.++.+|+++ .|++++|++|.++.
T Consensus 301 G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 301 GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999954 57899999998753
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=292.61 Aligned_cols=348 Identities=17% Similarity=0.125 Sum_probs=229.0
Q ss_pred HHHHHHHHhhCC--CcEEEEecCCCCCc---------------------ccccCCCceEEEEeecCCCCC-CCCcchhhH
Q 014316 22 QYQALSLARQMS--LEVDVVAYGGSKPH---------------------AAILEHPSIHIHTMTQWPTIP-RGLPKVLKP 77 (427)
Q Consensus 22 ~~~a~~La~~~g--~~V~vi~~~~~~~~---------------------~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~ 77 (427)
..+|.+|++. | |+|+|+|-..+.+. .+....+|+.++++| ..+. ..+.+.. .
T Consensus 202 ~ELAraLa~~-~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip--~GP~~~~l~Ke~-L 277 (1050)
T TIGR02468 202 VELARALGSM-PGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIP--FGPRDKYIPKEE-L 277 (1050)
T ss_pred HHHHHHHHhC-CCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEec--cCCCCCCcCHHH-H
Confidence 4466777775 7 79999996543211 011234599999999 4443 2333321 1
Q ss_pred HHHHHHHHHHHHHHHHH----HHhh-----hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhh--hc
Q 014316 78 VLLLLKPLIQFFMLLWF----LCVK-----IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL--SL 146 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~--~~ 146 (427)
..++-.+...+...+.. +..+ ...||+||+|. ..+..++..++...++|+|+|.|.++-.-... ..
T Consensus 278 ~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHy---w~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~ 354 (1050)
T TIGR02468 278 WPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHY---ADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQ 354 (1050)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECc---chHHHHHHHHHHhhCCCEEEECccchhhhhhhhccc
Confidence 11122222221111110 1111 11499999998 77777788999999999999999875211110 00
Q ss_pred CC------CchHH-HHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhC----------------------C---eEEEecC
Q 014316 147 GR------RSHFV-SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG----------------------I---KATVLYD 194 (427)
Q Consensus 147 ~~------~~~~~-~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~----------------------~---~~~vi~n 194 (427)
+. ...+. ......|+.+.+.||.||++|+..++++...|+ . ++.||||
T Consensus 355 g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPp 434 (1050)
T TIGR02468 355 GRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPP 434 (1050)
T ss_pred ccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCC
Confidence 10 00011 112246888999999999999999987655542 1 5799999
Q ss_pred C-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCH
Q 014316 195 Q-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF 273 (427)
Q Consensus 195 ~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~ 273 (427)
| |.+.|.|...+...+. ++.. + .........+.. ++. ....++++ +|+++||+.+.||+
T Consensus 435 GVD~~~F~P~~~~~~~~~---~~~~-----------~---~~~~~~~~~~~~-l~r-~~~~pdkp-vIL~VGRL~p~KGi 494 (1050)
T TIGR02468 435 GMEFSHIVPHDGDMDGET---EGNE-----------E---HPAKPDPPIWSE-IMR-FFTNPRKP-MILALARPDPKKNI 494 (1050)
T ss_pred CCcHHHccCCCccccchh---cccc-----------c---ccccccchhhHH-HHh-hcccCCCc-EEEEEcCCccccCH
Confidence 9 8888887532111000 0000 0 000000000000 000 02234444 89999999999999
Q ss_pred HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-----------HHHHHHHHHcCCC-
Q 014316 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----------ESYEEKIRRLRLK- 341 (427)
Q Consensus 274 ~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-----------~~~~~~~~~l~l~- 341 (427)
+.||+|+..+.+. ...+++. +|+|+|++. .+++++++++++.
T Consensus 495 ~~LIeAf~~L~~l-------------------------~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g 548 (1050)
T TIGR02468 495 TTLVKAFGECRPL-------------------------RELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYG 548 (1050)
T ss_pred HHHHHHHHHhHhh-------------------------ccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCC
Confidence 9999999998753 0134666 466877643 3467788899995
Q ss_pred cEEEecCCCCcccHHHHHhcC----cEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CCh
Q 014316 342 RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSS 415 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~ 415 (427)
+|.|+|. ++.++++++|+.| |++|+| |..|+||++++||||||+|||+|++||+.|++.++.+|+++ .|+
T Consensus 549 ~V~FlG~-v~~edvp~lYr~Ad~s~DVFV~P---S~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~ 624 (1050)
T TIGR02468 549 QVAYPKH-HKQSDVPDIYRLAAKTKGVFINP---AFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQ 624 (1050)
T ss_pred eEEecCC-CCHHHHHHHHHHhhhcCCeeeCC---cccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCH
Confidence 7999997 9999999999988 699997 88899999999999999999999999999999999999999 578
Q ss_pred HHHHHHHHHhc
Q 014316 416 SELADQLLVNA 426 (427)
Q Consensus 416 ~~la~~l~~~~ 426 (427)
++||++|.++.
T Consensus 625 eaLA~AL~~LL 635 (1050)
T TIGR02468 625 QAIADALLKLV 635 (1050)
T ss_pred HHHHHHHHHHh
Confidence 99999998763
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-31 Score=271.68 Aligned_cols=329 Identities=12% Similarity=0.066 Sum_probs=215.7
Q ss_pred CCCcceEEEEEeCCCCCChh----HHHHHHHHHhhCC-CcEEEEecCCCCCcc------------------cccCCCceE
Q 014316 1 MGRRGRACVVVLGDLGRSPR----MQYQALSLARQMS-LEVDVVAYGGSKPHA------------------AILEHPSIH 57 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r----~~~~a~~La~~~g-~~V~vi~~~~~~~~~------------------~~~~~~~i~ 57 (427)
|.++++|.|++.+..-...| ....+..|+++ | |+|+|+++......+ ...+..+-+
T Consensus 1 ~~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~ 79 (462)
T PLN02846 1 MQKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEER 79 (462)
T ss_pred CCCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCe
Confidence 56778899988766654444 35567788886 9 799999975431100 001111345
Q ss_pred EEEeecCCCCCCCC-----cchhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEE
Q 014316 58 IHTMTQWPTIPRGL-----PKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV 132 (427)
Q Consensus 58 v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~ 132 (427)
+.+++..+.+...- .+.......+.+.+. ..+||+||+++|..+...-.+...++..++ +|.
T Consensus 80 v~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~------------~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~ 146 (462)
T PLN02846 80 ISFLPKFSIKFYPGKFSTDKRSILPVGDISETIP------------DEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIG 146 (462)
T ss_pred EEEecccccccCcccccccccccCChHHHHHHHH------------hcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEE
Confidence 56666432211000 011111122223332 289999999997654332113334444444 777
Q ss_pred EecccchhhhhhhcCCCchHHHHHHHHHHHHhc-cCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHH
Q 014316 133 DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK-MANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHE 210 (427)
Q Consensus 133 ~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~ 210 (427)
++|.- |..+....+.......+.+.+.+++.+ ++|.+++.|..+++ +.+. ..+..+| |.++|.+.....+ +
T Consensus 147 tyHT~-y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~----~i~~v~GVd~~~f~~~~~~~~-~ 219 (462)
T PLN02846 147 IVHTN-YLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRS----IICNVHGVNPKFLEIGKLKLE-Q 219 (462)
T ss_pred EECCC-hHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhC----EEecCceechhhcCCCcccHh-h
Confidence 89975 422211111101112223334444433 38999999997766 4332 2333477 7777765431110 1
Q ss_pred HHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCC-CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhh
Q 014316 211 LFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR-PALVVSSTSWTPDEDFGILLEAALMYDRRVAA 289 (427)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~ 289 (427)
. ....+. ...++|+||+.++||++.|++|++.+.+.
T Consensus 220 ~----------------------------------------~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~--- 256 (462)
T PLN02846 220 Q----------------------------------------KNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKE--- 256 (462)
T ss_pred h----------------------------------------cCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhh---
Confidence 0 011111 12689999999999999999999998875
Q ss_pred hhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeec
Q 014316 290 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369 (427)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~ 369 (427)
.|+++|+|+|+||+++++++++++++++...|.|. ++..+++..+|++|+|
T Consensus 257 ------------------------~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~----~~~~~~~~~~DvFv~p- 307 (462)
T PLN02846 257 ------------------------LSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR----DHADPLFHDYKVFLNP- 307 (462)
T ss_pred ------------------------CCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC----CCHHHHHHhCCEEEEC-
Confidence 68899999999999999999999999864346664 3444799999999997
Q ss_pred cCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 370 ~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
|..|+||++++||||||+|||+++.++ .+++.++.+|++++|.+++++++.++
T Consensus 308 --S~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~~~~~~a~ai~~~ 360 (462)
T PLN02846 308 --STTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYDDGKGFVRATLKA 360 (462)
T ss_pred --CCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecCCHHHHHHHHHHH
Confidence 888999999999999999999999998 59999999999999999999998875
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-31 Score=263.18 Aligned_cols=303 Identities=15% Similarity=0.137 Sum_probs=210.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCC
Q 014316 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (427)
Q Consensus 22 ~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (427)
...+..|.++ ||+|+|+|........ .....|+++++++. ......... ...+. . ++....+..+
T Consensus 22 ~~la~~L~~~-g~~v~v~~~~~~~~~~-~~~~~~i~~~~~~~--~~~~~~~~~---~~~~~-~-------~~~~~~~~~~ 86 (363)
T cd04955 22 EELAPRLVAR-GHEVTVYCRSPYPKQK-ETEYNGVRLIHIPA--PEIGGLGTI---IYDIL-A-------ILHALFVKRD 86 (363)
T ss_pred HHHHHHHHhc-CCCEEEEEccCCCCCc-ccccCCceEEEcCC--CCccchhhh---HHHHH-H-------HHHHHhccCC
Confidence 4455667765 9999999976543221 33456999999883 211111111 11110 1 1111112356
Q ss_pred CcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHH
Q 014316 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (427)
Q Consensus 102 ~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l 181 (427)
+|++|...|.. .. +....+..+.|++++.|+..+.. ........++.++.+++..+.+|.++++|+.+++.+
T Consensus 87 ~~~i~~~~~~~---~~-~~~~~~~~~~~~v~~~h~~~~~~----~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 158 (363)
T cd04955 87 IDHVHALGPAI---AP-FLPLLRLKGKKVVVNMDGLEWKR----AKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYL 158 (363)
T ss_pred eEEEEecCccH---HH-HHHHHHhcCCCEEEEccCcceee----cccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHH
Confidence 66666655322 22 23334445899999999875421 111223355677888999999999999999999999
Q ss_pred HHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeE
Q 014316 182 AQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPAL 260 (427)
Q Consensus 182 ~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (427)
.+.++.+..+|||| +...+.+ +.+.+.. ....+ +. .
T Consensus 159 ~~~~~~~~~~i~ngv~~~~~~~-----~~~~~~~------------------------------------~~~~~-~~-~ 195 (363)
T cd04955 159 KEKYGRDSTYIPYGADHVVSSE-----EDEILKK------------------------------------YGLEP-GR-Y 195 (363)
T ss_pred HHhcCCCCeeeCCCcChhhcch-----hhhhHHh------------------------------------cCCCC-Cc-E
Confidence 88888777899999 5544432 0011000 11222 23 6
Q ss_pred EEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH-HcC
Q 014316 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR-RLR 339 (427)
Q Consensus 261 i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~-~l~ 339 (427)
++|+||+.+.||++.+++|++++. ++++|+++|+|+..+.+.+.++ .++
T Consensus 196 i~~~G~~~~~Kg~~~li~a~~~l~------------------------------~~~~l~ivG~~~~~~~~~~~~~~~~~ 245 (363)
T cd04955 196 YLLVGRIVPENNIDDLIEAFSKSN------------------------------SGKKLVIVGNADHNTPYGKLLKEKAA 245 (363)
T ss_pred EEEEecccccCCHHHHHHHHHhhc------------------------------cCceEEEEcCCCCcchHHHHHHHHhC
Confidence 789999999999999999998863 2689999999977767766666 566
Q ss_pred C-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHH
Q 014316 340 L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417 (427)
Q Consensus 340 l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~ 417 (427)
. ++|+|+|. ++.+++.+++.+||++++| |.. |++|++++||||||+|||+|++|+..|++.+ +|+++.+.+.
T Consensus 246 ~~~~V~~~g~-~~~~~~~~~~~~ad~~v~p---s~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~ 319 (363)
T cd04955 246 ADPRIIFVGP-IYDQELLELLRYAALFYLH---GHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD 319 (363)
T ss_pred CCCcEEEccc-cChHHHHHHHHhCCEEEeC---CccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH
Confidence 6 48999997 9999999999999999997 666 9999999999999999999999999999965 7888865555
Q ss_pred HHHHHHHhc
Q 014316 418 LADQLLVNA 426 (427)
Q Consensus 418 la~~l~~~~ 426 (427)
++++|.++.
T Consensus 320 l~~~i~~l~ 328 (363)
T cd04955 320 LASLLEELE 328 (363)
T ss_pred HHHHHHHHH
Confidence 888887653
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-31 Score=272.04 Aligned_cols=331 Identities=15% Similarity=0.128 Sum_probs=221.0
Q ss_pred CCCCCChhHHHHH-HHHHhh-CCCcEEEEecCCCCCc----------ccccCCCceEEEEee-c-CCCCCCCCcchhhHH
Q 014316 13 GDLGRSPRMQYQA-LSLARQ-MSLEVDVVAYGGSKPH----------AAILEHPSIHIHTMT-Q-WPTIPRGLPKVLKPV 78 (427)
Q Consensus 13 ~~~~~~~r~~~~a-~~La~~-~g~~V~vi~~~~~~~~----------~~~~~~~~i~v~~~~-~-~~~~~~~~~~~~~~~ 78 (427)
+..||++|+.-.| .+|.+. .+|+|+|.|...+..+ -++...++++++++. . ...+...+.++....
T Consensus 11 ~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 90 (419)
T cd03806 11 NAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEASTYPRFTLLG 90 (419)
T ss_pred CCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccccCCceeeHH
Confidence 3334888887665 455553 3789999997654422 111223467755552 1 111122223322222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchh-hhh--hhcC--------
Q 014316 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLS--LSLG-------- 147 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~-~~~--~~~~-------- 147 (427)
..+...+.. +.. +. ..+|||++.+.+..... . ++..+.++|+|+.+|-...+ .+. .+.+
T Consensus 91 ~~~~~~~~~----~~~-~~-~~~pDv~i~~~g~~~~~-~---~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~ 160 (419)
T cd03806 91 QALGSMILG----LEA-LL-KLVPDIFIDTMGYPFTY-P---LVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSA 160 (419)
T ss_pred HHHHHHHHH----HHH-HH-hcCCCEEEEcCCcccHH-H---HHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCcc
Confidence 222111111 111 11 25799998886332221 2 22233488999999922000 111 1111
Q ss_pred ---CCc---hH----HHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhh
Q 014316 148 ---RRS---HF----VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCR 214 (427)
Q Consensus 148 ---~~~---~~----~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~ 214 (427)
+.+ .. ++.+.+++++..+.||.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+...
T Consensus 161 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~--------- 231 (419)
T cd03806 161 TIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL--------- 231 (419)
T ss_pred chhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc---------
Confidence 111 11 23344688999999999999999999999887766 58899998 5444432210
Q ss_pred hhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccC
Q 014316 215 LNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (427)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~ 294 (427)
....+...|+|+||+.++||++.+++|++.+.+....
T Consensus 232 --------------------------------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~----- 268 (419)
T cd03806 232 --------------------------------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPE----- 268 (419)
T ss_pred --------------------------------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcc-----
Confidence 0011234899999999999999999999999875000
Q ss_pred CCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC------hHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEe
Q 014316 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVC 367 (427)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~------~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~ 367 (427)
...++++|+|+|+|.. .+++++++++++++ +|+|+|. ++.+++..+|+.||+++.
T Consensus 269 -----------------~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~-v~~~~l~~~l~~adv~v~ 330 (419)
T cd03806 269 -----------------EIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVN-APFEELLEELSTASIGLH 330 (419)
T ss_pred -----------------cccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecC-CCHHHHHHHHHhCeEEEE
Confidence 0013599999998742 35677889999995 8999997 999999999999999998
Q ss_pred eccCCCCCCCchHHHHHHcCCCcEEEeccCcc-cccee---cCCcEEEeCChHHHHHHHHHhc
Q 014316 368 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-EELVK---VDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 368 p~~~s~~e~~p~~~lEama~G~PVIas~~~g~-~e~v~---~~~~G~l~~~~~~la~~l~~~~ 426 (427)
| +..|+||++++||||||+|||+++.||. .|++. ++.+|++++|++++|++|.++.
T Consensus 331 ~---s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll 390 (419)
T cd03806 331 T---MWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKIL 390 (419)
T ss_pred C---CccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHH
Confidence 6 7779999999999999999999998774 57887 8999999999999999998764
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-31 Score=258.81 Aligned_cols=333 Identities=24% Similarity=0.337 Sum_probs=234.7
Q ss_pred CCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccc------cCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAI------LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 16 ~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~------~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
|...++...+.+|+++ ||+|++++.......... ....++++++++.... .. ......+.........
T Consensus 15 G~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~-- 88 (394)
T cd03794 15 GGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPY--KK-NGLLKRLLNYLSFALS-- 88 (394)
T ss_pred CcceeHHHHHHHHHhC-CceEEEEecCCCcccccccccceEEecCCeEEEEEecCCC--Cc-cchHHHHHhhhHHHHH--
Confidence 3444567778888886 999999997654332222 2345899998883221 11 1111111111111211
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhh-c-CCCchHHHHHHHHHHHHhccC
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS-L-GRRSHFVSIYRWIEKYYGKMA 167 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~-~-~~~~~~~~~~~~~e~~~~~~a 167 (427)
....+..+..+||+||++++. ......+...++..++|+++++|+......... . .......+..+++++...+.+
T Consensus 89 -~~~~~~~~~~~~D~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (394)
T cd03794 89 -ALLALLKRRRRPDVIIATSPP-LLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRA 166 (394)
T ss_pred -HHHHHHhcccCCCEEEEcCCh-HHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcC
Confidence 112222145899999999843 333343566666679999999999732211111 1 112222366788899999999
Q ss_pred CEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 168 NGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
|.++++|+.+++.+. .++. ++.+++|+ +...+.+...... +.
T Consensus 167 d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~------------------------------ 212 (394)
T cd03794 167 DAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADES---LR------------------------------ 212 (394)
T ss_pred CEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhh---hh------------------------------
Confidence 999999999999887 3333 38899998 5444433321100 00
Q ss_pred hcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
. .....++..++++|++.+.||++.+++|+..+.+ .++++|+++|
T Consensus 213 ------~-~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~----------------------------~~~~~l~i~G 257 (394)
T cd03794 213 ------K-ELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKD----------------------------RPDIRFLIVG 257 (394)
T ss_pred ------h-ccCCCCcEEEEEecCcccccCHHHHHHHHHHHhh----------------------------cCCeEEEEeC
Confidence 0 1123345689999999999999999999998865 2679999999
Q ss_pred CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCcccc
Q 014316 324 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEE 401 (427)
Q Consensus 324 ~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~~e 401 (427)
+|+..+.+++.+...++++|.|+|. ++.+++.++|+.||++++|..... +.++|++++|||+||+|||+++.++..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~ 336 (394)
T cd03794 258 DGPEKEELKELAKALGLDNVTFLGR-VPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE 336 (394)
T ss_pred CcccHHHHHHHHHHcCCCcEEEeCC-CChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh
Confidence 9999888888888888889999995 999999999999999999844332 4667999999999999999999999999
Q ss_pred ceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 402 LVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 402 ~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
++.++.+|+++ +|.++++++|.++.
T Consensus 337 ~~~~~~~g~~~~~~~~~~l~~~i~~~~ 363 (394)
T cd03794 337 LVEEAGAGLVVPPGDPEALAAAILELL 363 (394)
T ss_pred hhccCCcceEeCCCCHHHHHHHHHHHH
Confidence 99999999999 47899999998764
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-31 Score=258.91 Aligned_cols=253 Identities=21% Similarity=0.324 Sum_probs=196.4
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC-CCchHHHHHH-HHHHHHhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYR-WIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-~~~~~~~~~~-~~e~~~~~~ad~vi~vS~~ 176 (427)
..+||+||++++. .....+..+++..++|+++++|+. +........ .......... ++++.+.+.+|.++++|+.
T Consensus 82 ~~~~Div~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~ 158 (374)
T cd03817 82 ELGPDIVHTHTPF--SLGLLGLRVARKLGIPVVATYHTM-YEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEK 158 (374)
T ss_pred hcCCCEEEECCch--hhhhHHHHHHHHcCCCEEEEecCC-HHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHH
Confidence 4799999999863 223335666777899999999988 432211111 1112222233 6788888999999999999
Q ss_pred HHHHHHHhhCCe--EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 177 MQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 177 ~~~~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
+++.+.+. +.+ +.+++|+ +...+.+...... +.. ...
T Consensus 159 ~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~------------------------------------~~~ 198 (374)
T cd03817 159 IADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDE---RRK------------------------------------LGI 198 (374)
T ss_pred HHHHHHhc-CCCCceEEcCCccchhccCccchhHH---HHh------------------------------------cCC
Confidence 99888664 433 7899999 6666654431111 000 112
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
.+++..|+++|++.+.||++.++++++.+.++ .++++|+++|+|+..+.+++
T Consensus 199 -~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~ 250 (374)
T cd03817 199 -PEDEPVLLYVGRLAKEKNIDFLIRAFARLLKE---------------------------EPDVKLVIVGDGPEREELEE 250 (374)
T ss_pred -CCCCeEEEEEeeeecccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchHHHHHH
Confidence 23346899999999999999999999998875 67899999999999999999
Q ss_pred HHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 334 ~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
.++++++. +|.|+|. ++.+++..+|+.||++++| +..|++|++++|||+||+|||+++.|+..|++.++.+|+++
T Consensus 251 ~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~l~~---s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~ 326 (374)
T cd03817 251 LARELGLADRVIFTGF-VPREELPDYYKAADLFVFA---STTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF 326 (374)
T ss_pred HHHHcCCCCcEEEecc-CChHHHHHHHHHcCEEEec---ccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe
Confidence 99988885 8999997 9999999999999999997 66789999999999999999999999999999999999999
Q ss_pred CCh-HHHHHHHHHhc
Q 014316 413 SSS-SELADQLLVNA 426 (427)
Q Consensus 413 ~~~-~~la~~l~~~~ 426 (427)
++. .+++++|.++.
T Consensus 327 ~~~~~~~~~~i~~l~ 341 (374)
T cd03817 327 PPGDEALAEALLRLL 341 (374)
T ss_pred CCCCHHHHHHHHHHH
Confidence 443 38888887653
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-31 Score=260.26 Aligned_cols=310 Identities=17% Similarity=0.187 Sum_probs=221.0
Q ss_pred CCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 15 LGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 15 ~~~~~r~~-~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
.|+.+.+. ..+.+|.++ ||+|+|++........ .....++++++++.... . .......... ..
T Consensus 13 ~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~-~~--------- 76 (357)
T cd03795 13 RGGIEQVIRDLAEGLAAR-GIEVAVLCASPEPKGR-DEERNGHRVIRAPSLLN--V--ASTPFSPSFF-KQ--------- 76 (357)
T ss_pred CCcHHHHHHHHHHHHHhC-CCceEEEecCCCCcch-hhhccCceEEEeecccc--c--ccccccHHHH-HH---------
Confidence 44545443 345677775 9999999976544222 22334667777763211 0 0000000000 00
Q ss_pred HHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 94 ~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
+..+..++|+||+|.+....... .+. ...++|+++++|+..+ ....+...++++++.+.+.+|.++++
T Consensus 77 -~~~~~~~~Dii~~~~~~~~~~~~--~~~-~~~~~~~i~~~h~~~~--------~~~~~~~~~~~~~~~~~~~~d~vi~~ 144 (357)
T cd03795 77 -LKKLAKKADVIHLHFPNPLADLA--LLL-LPRKKPVVVHWHSDIV--------KQKLLLKLYRPLQRRFLRRADAIVAT 144 (357)
T ss_pred -HHhcCCCCCEEEEecCcchHHHH--HHH-hccCceEEEEEcChhh--------ccchhhhhhhHHHHHHHHhcCEEEeC
Confidence 00134799999999855433222 222 2268899999997633 22234556678888889999999999
Q ss_pred CHHHHHHHHHhhC--CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 174 TQAMQHELAQNWG--IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 174 S~~~~~~l~~~~~--~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
|+.+.+.+...+. .++.++||+ +...+.+........
T Consensus 145 s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~---------------------------------------- 184 (357)
T cd03795 145 SPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAI---------------------------------------- 184 (357)
T ss_pred cHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHh----------------------------------------
Confidence 9999987765443 348899999 655554432110000
Q ss_pred cccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 251 ~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
.....+...|+|+|++.+.||++.+++|++++. +++|+++|+|+..+.
T Consensus 185 -~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~-------------------------------~~~l~i~G~g~~~~~ 232 (357)
T cd03795 185 -WRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP-------------------------------DAPLVIVGEGPLEAE 232 (357)
T ss_pred -hcCCCCCcEEEEecccccccCHHHHHHHHHhcc-------------------------------CcEEEEEeCChhHHH
Confidence 112233458999999999999999999999852 699999999999999
Q ss_pred HHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec-CCc
Q 014316 331 YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-DKN 408 (427)
Q Consensus 331 ~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~-~~~ 408 (427)
+++.+++++.. +|.|+|. ++.+++.+++++||++++|. .+..|++|++++|||+||+|||+|+.++..+.+.+ +.+
T Consensus 233 ~~~~~~~~~~~~~V~~~g~-v~~~~~~~~~~~ad~~i~ps-~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~ 310 (357)
T cd03795 233 LEALAAALGLLDRVRFLGR-LDDEEKAALLAACDVFVFPS-VERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVT 310 (357)
T ss_pred HHHHHHhcCCcceEEEcCC-CCHHHHHHHHHhCCEEEeCC-cccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCc
Confidence 99999888884 8999997 99999999999999999972 12359999999999999999999999999998886 899
Q ss_pred EEEe--CChHHHHHHHHHhc
Q 014316 409 GLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~--~~~~~la~~l~~~~ 426 (427)
|+++ +|+++++++|.++.
T Consensus 311 g~~~~~~d~~~~~~~i~~l~ 330 (357)
T cd03795 311 GLVVPPGDPAALAEAIRRLL 330 (357)
T ss_pred eEEeCCCCHHHHHHHHHHHH
Confidence 9999 57899999998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=255.38 Aligned_cols=315 Identities=21% Similarity=0.216 Sum_probs=223.0
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI 86 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (427)
++++.....|....+...+..|.++ ||+|++++....... .....+++++.++....... ..........+.+.
T Consensus 2 Il~i~~~~~g~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 75 (359)
T cd03808 2 ILHIVTVDGGLYSFRLPLIKALRAA-GYEVHVVAPPGDELE--ELEALGVKVIPIPLDRRGIN-PFKDLKALLRLYRL-- 75 (359)
T ss_pred eeEEEecchhHHHHHHHHHHHHHhc-CCeeEEEecCCCccc--ccccCCceEEeccccccccC-hHhHHHHHHHHHHH--
Confidence 4444444333333455567777775 999999997765422 34456888888872110010 10111111111111
Q ss_pred HHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc
Q 014316 87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (427)
Q Consensus 87 ~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (427)
.+..+||+||+++. ...+.+.+.++ ..+.++++++|++.+.. .........+..++++..+
T Consensus 76 ----------~~~~~~dvv~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 137 (359)
T cd03808 76 ----------LRKERPDIVHTHTP---KPGILGRLAARLAGVPKVIYTVHGLGFVF-----TSGGLKRRLYLLLERLALR 137 (359)
T ss_pred ----------HHhcCCCEEEEccc---cchhHHHHHHHHcCCCCEEEEecCcchhh-----ccchhHHHHHHHHHHHHHh
Confidence 12379999999973 22333455555 45667888889885421 1112245567788899999
Q ss_pred cCCEEEEcCHHHHHHHHHhhCC----eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 166 MANGCLCVTQAMQHELAQNWGI----KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~----~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
.+|.++++|+.+++.+.+.+.. .+.+++++ +.+.+.+...
T Consensus 138 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 182 (359)
T cd03808 138 FTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPE----------------------------------- 182 (359)
T ss_pred hccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCcccc-----------------------------------
Confidence 9999999999999998876543 25555666 4433322210
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
. ..+++..++|+|++.+.||++.++++++.+.+. .++++|+
T Consensus 183 -----------~-~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~---------------------------~~~~~l~ 223 (359)
T cd03808 183 -----------P-IPEDDPVFLFVARLLKDKGIDELLEAARILKAK---------------------------GPNVRLL 223 (359)
T ss_pred -----------c-cCCCCcEEEEEeccccccCHHHHHHHHHHHHhc---------------------------CCCeEEE
Confidence 0 122345899999999999999999999998765 6889999
Q ss_pred EEeCCCChHHHHHH-HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 321 ITGKGPDKESYEEK-IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 321 i~G~G~~~~~~~~~-~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
++|.|+..+..... +.+++. ++|.|.|. .+++.++|+.||++++| |..|++|++++|||+||+|||+|+.++
T Consensus 224 i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~i~p---s~~e~~~~~~~Ea~~~G~Pvi~s~~~~ 297 (359)
T cd03808 224 LVGDGDEENPAAILEIEKLGLEGRVEFLGF---RDDVPELLAAADVFVLP---SYREGLPRVLLEAMAMGRPVIATDVPG 297 (359)
T ss_pred EEcCCCcchhhHHHHHHhcCCcceEEEeec---cccHHHHHHhccEEEec---CcccCcchHHHHHHHcCCCEEEecCCC
Confidence 99999876665544 566666 48999997 88999999999999997 666999999999999999999999999
Q ss_pred cccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 399 IEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 399 ~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
..|++.++.+|+++ +|+++++++|.++
T Consensus 298 ~~~~i~~~~~g~~~~~~~~~~~~~~i~~l 326 (359)
T cd03808 298 CREAVIDGVNGFLVPPGDAEALADAIERL 326 (359)
T ss_pred chhhhhcCcceEEECCCCHHHHHHHHHHH
Confidence 99999999999999 4689999998875
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-31 Score=274.03 Aligned_cols=269 Identities=16% Similarity=0.110 Sum_probs=187.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcC---CcEEEEecccchhhh-h---h-hcCCC-chH-HHH-----HHHHHHHHh
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR---SAFIVDWHNFGYTLL-S---L-SLGRR-SHF-VSI-----YRWIEKYYG 164 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~---~p~i~~~h~~~~~~~-~---~-~~~~~-~~~-~~~-----~~~~e~~~~ 164 (427)
.+|||||+|+ ..+.+++.+++...+ +|+|+|+|+..+.-. . . ..+.. ..+ ... ...+.+...
T Consensus 127 ~~~DiiH~hd---w~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 203 (473)
T TIGR02095 127 WQPDVVHAHD---WHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGI 203 (473)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHH
Confidence 6899999998 555665666666554 999999999854210 0 0 00000 000 000 012345667
Q ss_pred ccCCEEEEcCHHHHHHHHHh-h-----------CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccC
Q 014316 165 KMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN 231 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (427)
+.||.+++||+.+++++... + ..++.+|+|| |.+.|.|.....-.. ++. +.
T Consensus 204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~---~~~------------~~- 267 (473)
T TIGR02095 204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA---NYS------------AD- 267 (473)
T ss_pred HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCccccc---CcC------------cc-
Confidence 89999999999999887642 1 1248899999 878776542100000 000 00
Q ss_pred CCCCCCccchhhhcccccccccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCc
Q 014316 232 GMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 310 (427)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (427)
..+....+ +...+++++++. ++..+|+|+||+.++||++.|++|++.+.+.
T Consensus 268 ~~~~k~~~----k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------------ 319 (473)
T TIGR02095 268 DLAGKAEN----KEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL------------------------ 319 (473)
T ss_pred chhhhhhh----HHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc------------------------
Confidence 00000000 011222334443 1334899999999999999999999998753
Q ss_pred ccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 311 QYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 311 ~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
+++|+|+|+|+ ..+.+++++++++ .++.|.+. .+.+++..+|++||++++| |..|+||++++|||+||
T Consensus 320 -----~~~lvi~G~g~~~~~~~l~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aDv~l~p---S~~E~~gl~~lEAma~G 389 (473)
T TIGR02095 320 -----GGQLVVLGTGDPELEEALRELAERYP-GNVRVIIG-YDEALAHLIYAGADFILMP---SRFEPCGLTQLYAMRYG 389 (473)
T ss_pred -----CcEEEEECCCCHHHHHHHHHHHHHCC-CcEEEEEc-CCHHHHHHHHHhCCEEEeC---CCcCCcHHHHHHHHHCC
Confidence 49999999995 3456777777654 56888887 7888899999999999997 88899999999999999
Q ss_pred CcEEEeccCccccceecC------CcEEEe--CChHHHHHHHHHh
Q 014316 389 LPVCAVSYSCIEELVKVD------KNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 389 ~PVIas~~~g~~e~v~~~------~~G~l~--~~~~~la~~l~~~ 425 (427)
+|+|+|++||..|+|.++ .+|+++ .|+++|+++|.++
T Consensus 390 ~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~ 434 (473)
T TIGR02095 390 TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRA 434 (473)
T ss_pred CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 999999999999999998 899999 5789999998764
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-31 Score=259.45 Aligned_cols=236 Identities=24% Similarity=0.224 Sum_probs=191.2
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..++|+||+|.+. ....++.+.++..++|++++.|+.... .... .+.++...+.+|.++|+|+.++
T Consensus 77 ~~~~Dii~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~vi~~s~~~~ 142 (355)
T cd03799 77 RLGIDHIHAHFGT--TPATVAMLASRLGGIPYSFTAHGKDIF------RSPD------AIDLDEKLARADFVVAISEYNR 142 (355)
T ss_pred hcCCCEEEECCCC--chHHHHHHHHHhcCCCEEEEEeccccc------ccCc------hHHHHHHHhhCCEEEECCHHHH
Confidence 4789999999843 333445666666789999999976320 1111 0456667789999999999999
Q ss_pred HHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+.+.+.++. ++.+++|+ +.+.|.+.. ...
T Consensus 143 ~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~-----------------------------------------------~~~ 175 (355)
T cd03799 143 QQLIRLLGCDPDKIHVVHCGVDLERFPPRP-----------------------------------------------PPP 175 (355)
T ss_pred HHHHHhcCCCcccEEEEeCCcCHHHcCCcc-----------------------------------------------ccc
Confidence 999886433 38899999 544443221 001
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.+++..|+|+|++.+.||++.+++++..+.+. .++++|.++|+|+..+++++.
T Consensus 176 ~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 228 (355)
T cd03799 176 PGEPLRILSVGRLVEKKGLDYLLEALALLKDR---------------------------GIDFRLDIVGDGPLRDELEAL 228 (355)
T ss_pred cCCCeEEEEEeeeccccCHHHHHHHHHHHhhc---------------------------CCCeEEEEEECCccHHHHHHH
Confidence 22345899999999999999999999998764 678999999999999999999
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC------CCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG------LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~------e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
++++++. +|.|.|. ++.+++..+|++||++++| |.. |++|++++|||+||+|||+++.|+.+|++.++.
T Consensus 229 ~~~~~~~~~v~~~g~-~~~~~l~~~~~~adi~l~~---s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~ 304 (355)
T cd03799 229 IAELGLEDRVTLLGA-KSQEEVRELLRAADLFVLP---SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGE 304 (355)
T ss_pred HHHcCCCCeEEECCc-CChHHHHHHHHhCCEEEec---ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCC
Confidence 9999884 8999997 9999999999999999997 444 999999999999999999999999999999999
Q ss_pred cEEEe--CChHHHHHHHHHhc
Q 014316 408 NGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 408 ~G~l~--~~~~~la~~l~~~~ 426 (427)
+|+++ +|.++++++|.++.
T Consensus 305 ~g~~~~~~~~~~l~~~i~~~~ 325 (355)
T cd03799 305 TGLLVPPGDPEALADAIERLL 325 (355)
T ss_pred ceEEeCCCCHHHHHHHHHHHH
Confidence 99999 47899999998753
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-30 Score=282.36 Aligned_cols=255 Identities=15% Similarity=0.112 Sum_probs=182.1
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh------hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~------~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
.+|||||+|+ +.+.+++.+++. +.++|+|+|+|+..+ + .. . .+...+.||.|++|
T Consensus 708 ~~PDIIHaHD---W~talva~llk~~~~~~~~~~~p~V~TiHnl~~-------~-~n-------~-lk~~l~~AD~ViTV 768 (1036)
T PLN02316 708 FHPDIIHCHD---WSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF-------G-AN-------H-IGKAMAYADKATTV 768 (1036)
T ss_pred CCCCEEEECC---ChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc-------c-hh-------H-HHHHHHHCCEEEeC
Confidence 5899999998 555555555544 246899999999854 1 11 1 12344689999999
Q ss_pred CHHHHHHHHHhhC-----CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 174 TQAMQHELAQNWG-----IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 174 S~~~~~~l~~~~~-----~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
|+.+++++...+. .++.+|+|| |.+.|.|.........| .+. ....++.. -+..+
T Consensus 769 S~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y---------------~~~-~~~~gK~~---~k~~L 829 (1036)
T PLN02316 769 SPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPY---------------TSE-NVVEGKRA---AKEAL 829 (1036)
T ss_pred CHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccC---------------Cch-hhhhhhhh---hHHHH
Confidence 9999999876543 248999999 88777654210000000 000 00000000 00012
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 327 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~ 327 (427)
+++++++..+..+|+++||+.++||++.|++|+..+.+. +++|+|+|+||+
T Consensus 830 r~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~-----------------------------~~qlVIvG~Gpd 880 (1036)
T PLN02316 830 QQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER-----------------------------NGQVVLLGSAPD 880 (1036)
T ss_pred HHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc-----------------------------CcEEEEEeCCCC
Confidence 233445432334899999999999999999999987643 689999999986
Q ss_pred ---hHHHHHHHHHcCC---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccc
Q 014316 328 ---KESYEEKIRRLRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 401 (427)
Q Consensus 328 ---~~~~~~~~~~l~l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e 401 (427)
.+.++++++++++ ++|.|.|. .+......+|++||++|+| |..|+||++++|||+||+|+|++++||++|
T Consensus 881 ~~~e~~l~~La~~Lg~~~~~rV~f~g~-~de~lah~iyaaADiflmP---S~~EP~GLvqLEAMa~GtppVvs~vGGL~D 956 (1036)
T PLN02316 881 PRIQNDFVNLANQLHSSHHDRARLCLT-YDEPLSHLIYAGADFILVP---SIFEPCGLTQLTAMRYGSIPVVRKTGGLFD 956 (1036)
T ss_pred HHHHHHHHHHHHHhCccCCCeEEEEec-CCHHHHHHHHHhCcEEEeC---CcccCccHHHHHHHHcCCCeEEEcCCCcHh
Confidence 3567888998876 36999887 3333335899999999998 889999999999999999999999999999
Q ss_pred ceecC-------------CcEEEe--CChHHHHHHHHHh
Q 014316 402 LVKVD-------------KNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 402 ~v~~~-------------~~G~l~--~~~~~la~~l~~~ 425 (427)
+|.++ .+|++| .++++|+++|.+.
T Consensus 957 tV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~ra 995 (1036)
T PLN02316 957 TVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRA 995 (1036)
T ss_pred hccccccccccccccccCCceEEeCCCCHHHHHHHHHHH
Confidence 99884 689999 4688888888764
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.8e-30 Score=253.57 Aligned_cols=238 Identities=19% Similarity=0.238 Sum_probs=186.1
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+||+|.+. ...++.++++. .+.|++++.|+... .. ....++.++..+.++.++++|+..+
T Consensus 78 ~~pdiv~~~~~~---~~~~~~l~~~~~~~~~~v~~~h~~~~---------~~---~~~~~~~~~~~~~~~~~~~~s~~~~ 142 (360)
T cd04951 78 FKPDVVHAHMFH---ANIFARLLRLFLPSPPLICTAHSKNE---------GG---RLRMLAYRLTDFLSDLTTNVSKEAL 142 (360)
T ss_pred cCCCEEEEcccc---hHHHHHHHHhhCCCCcEEEEeeccCc---------hh---HHHHHHHHHHhhccCceEEEcHHHH
Confidence 799999999843 23334444443 46789999998732 11 2234455566677899999999999
Q ss_pred HHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+++.+.... ++.++||| +...|.+... ...+... ++...
T Consensus 143 ~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~-~~~~~~~------------------------------------~~~~~ 185 (360)
T cd04951 143 DYFIASKAFNANKSFVVYNGIDTDRFRKDPA-RRLKIRN------------------------------------ALGVK 185 (360)
T ss_pred HHHHhccCCCcccEEEEccccchhhcCcchH-HHHHHHH------------------------------------HcCcC
Confidence 998876543 38899999 6665544321 1112111 11233
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.+ ..+++|+|++.+.||++.+++|++.+.+. .|+++|+|+|+|+..+++++.
T Consensus 186 ~~-~~~~l~~g~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~ 237 (360)
T cd04951 186 ND-TFVILAVGRLVEAKDYPNLLKAFAKLLSD---------------------------YLDIKLLIAGDGPLRATLERL 237 (360)
T ss_pred CC-CEEEEEEeeCchhcCcHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCCcHHHHHHH
Confidence 33 35899999999999999999999998876 689999999999999999999
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
++++++. +|.|+|. .+++..+|+.||++++| |..|++|++++||||+|+|||+++.|+..|++++ +|+++
T Consensus 238 ~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~~---s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~ 309 (360)
T cd04951 238 IKALGLSNRVKLLGL---RDDIAAYYNAADLFVLS---SAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVP 309 (360)
T ss_pred HHhcCCCCcEEEecc---cccHHHHHHhhceEEec---ccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeC
Confidence 9998885 7999997 78999999999999997 7779999999999999999999999999999976 67777
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
+|.++++++|.++
T Consensus 310 ~~~~~~~~~~i~~l 323 (360)
T cd04951 310 ISDPEALANKIDEI 323 (360)
T ss_pred CCCHHHHHHHHHHH
Confidence 7889999999876
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.2e-30 Score=266.13 Aligned_cols=267 Identities=15% Similarity=0.101 Sum_probs=182.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh--hcCCcEEEEecccchhhhh-h----hcCCC-chH----HHHHH--HHHHHHhc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLS-L----SLGRR-SHF----VSIYR--WIEKYYGK 165 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~--~~~~p~i~~~h~~~~~~~~-~----~~~~~-~~~----~~~~~--~~e~~~~~ 165 (427)
.+|||||+|+ +.+.++..++.. ..++|+|+|+|+..|.... . ..+.. ..+ ...+. .+.+...+
T Consensus 132 ~~pDIiH~Hd---w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVPDIVHAHD---WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 6899999999 555554544443 2468999999998652100 0 00000 000 00000 13566778
Q ss_pred cCCEEEEcCHHHHHHHHHhh------------CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCC
Q 014316 166 MANGCLCVTQAMQHELAQNW------------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~------------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (427)
.||.|+|||+..++++++.+ ..++.+|+|| |.+.|.|.....-...|.. .
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~-----------------~ 271 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDV-----------------E 271 (485)
T ss_pred hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCCh-----------------h
Confidence 99999999999999987532 2248999999 8888876532110000000 0
Q ss_pred CCCCCccchhhhcccccccccCCC-CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcc
Q 014316 233 MEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 311 (427)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
....+. .-+...+++++++.+ ...+|+++||+.++||++.|++|++.+.+.
T Consensus 272 ~~~~k~---~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------------------------- 323 (485)
T PRK14099 272 TLAARA---ANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------------------------- 323 (485)
T ss_pred HHHhHH---HhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc-------------------------
Confidence 000000 000002223344332 234889999999999999999999988643
Q ss_pred cCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHH-hcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 312 YLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL-GSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 312 ~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l-~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
+++|+|+|+|+. ++.+++++++++...+.|+|+ .+++..+| ++||++|+| |..|+||++++|||+||
T Consensus 324 ----~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~---~~~l~~~~~a~aDifv~P---S~~E~fGl~~lEAma~G 393 (485)
T PRK14099 324 ----GAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY---DEALAHLIQAGADALLVP---SRFEPCGLTQLCALRYG 393 (485)
T ss_pred ----CcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC---CHHHHHHHHhcCCEEEEC---CccCCCcHHHHHHHHCC
Confidence 689999999963 567777877765223478897 88999887 579999998 88899999999999999
Q ss_pred CcEEEeccCccccceecC---------CcEEEe--CChHHHHHHHHH
Q 014316 389 LPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 389 ~PVIas~~~g~~e~v~~~---------~~G~l~--~~~~~la~~l~~ 424 (427)
+|+|+|++||++|+|.++ .+|+++ .|+++|+++|.+
T Consensus 394 ~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~ 440 (485)
T PRK14099 394 AVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRK 440 (485)
T ss_pred CCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHH
Confidence 988889999999999876 689999 578999999875
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-30 Score=259.56 Aligned_cols=227 Identities=16% Similarity=0.204 Sum_probs=173.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCc--EEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p--~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 176 (427)
..+||+||+|+ ......+.++++..+.| ++.+.|.. . ... ... ...+ .+.+|.++++|+.
T Consensus 82 ~~~~Dii~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~-~-------~~~-~~~----~~~~--~~~~d~~i~~S~~ 143 (359)
T PRK09922 82 ETQPDIVICID---VISCLYANKARKKSGKQFKIFSWPHFS-L-------DHK-KHA----ECKK--ITCADYHLAISSG 143 (359)
T ss_pred hcCCCEEEEcC---HHHHHHHHHHHHHhCCCCeEEEEecCc-c-------ccc-chh----hhhh--hhcCCEEEEcCHH
Confidence 38999999998 33334456666666655 34445533 1 011 111 1111 2689999999999
Q ss_pred HHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 177 MQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 177 ~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
.++++.+. +.+ +.+|||+ +.+.+....
T Consensus 144 ~~~~~~~~-~~~~~ki~vi~N~id~~~~~~~~------------------------------------------------ 174 (359)
T PRK09922 144 IKEQMMAR-GISAQRISVIYNPVEIKTIIIPP------------------------------------------------ 174 (359)
T ss_pred HHHHHHHc-CCCHHHEEEEcCCCCHHHccCCC------------------------------------------------
Confidence 99998764 543 8999998 533221110
Q ss_pred cCCCCCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 253 LKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
...+.+..++|+||+. +.||++.+++|++.+. ++++|+|+|+|++.++
T Consensus 175 ~~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~------------------------------~~~~l~ivG~g~~~~~ 224 (359)
T PRK09922 175 PERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT------------------------------GEWQLHIIGDGSDFEK 224 (359)
T ss_pred cccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC------------------------------CCeEEEEEeCCccHHH
Confidence 0011235899999986 4699999999998753 3699999999999999
Q ss_pred HHHHHHHcCCC-cEEEecCCCC--cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecC
Q 014316 331 YEEKIRRLRLK-RVAFRTMWLS--AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVD 406 (427)
Q Consensus 331 ~~~~~~~l~l~-~V~f~g~~~~--~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~ 406 (427)
++++++++++. +|.|+|. ++ .+++.++|+.+|++|+| |..|+||++++||||||+|||+|+ .||..|++.++
T Consensus 225 l~~~~~~~~l~~~v~f~G~-~~~~~~~~~~~~~~~d~~v~~---s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~ 300 (359)
T PRK09922 225 CKAYSRELGIEQRIIWHGW-QSQPWEVVQQKIKNVSALLLT---SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPG 300 (359)
T ss_pred HHHHHHHcCCCCeEEEecc-cCCcHHHHHHHHhcCcEEEEC---CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCC
Confidence 99999999985 8999997 54 37889999999999997 778999999999999999999999 89999999999
Q ss_pred CcEEEe--CChHHHHHHHHHhc
Q 014316 407 KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 407 ~~G~l~--~~~~~la~~l~~~~ 426 (427)
.+|+++ +|++++|++|.++.
T Consensus 301 ~~G~lv~~~d~~~la~~i~~l~ 322 (359)
T PRK09922 301 LNGELYTPGNIDEFVGKLNKVI 322 (359)
T ss_pred CceEEECCCCHHHHHHHHHHHH
Confidence 999998 67999999998764
|
|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-29 Score=248.22 Aligned_cols=249 Identities=24% Similarity=0.346 Sum_probs=197.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..++|+||++++... ....+.++..++|+++++|+..+..... ............++...+.+|.++++|+.++
T Consensus 83 ~~~~Dii~~~~~~~~---~~~~~~~~~~~~~~i~~~h~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 83 RERFDVVHAHDWLAL---LAAALAARLLGIPLVLTVHGLEFGRPGN---ELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred hcCCcEEEEechhHH---HHHHHHHHhcCCcEEEEeccchhhcccc---chhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 378999999984332 2223567778999999999984421110 0122244556778888899999999999999
Q ss_pred HHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+.+.+.++. ++.+++|+ +...+.+.....+.. ...
T Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~ 195 (374)
T cd03801 157 EELRELGGVPPEKITVIPNGVDTERFRPAPRAARRR-----------------------------------------LGI 195 (374)
T ss_pred HHHHhcCCCCCCcEEEecCcccccccCccchHHHhh-----------------------------------------cCC
Confidence 999988776 58999999 655554332000000 112
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.++...++|+|++.+.||++.+++|+..+.+. .++++|+++|.|+..+.+++.
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 248 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDLLLEALAKLRKE---------------------------YPDVRLVIVGDGPLREELEAL 248 (374)
T ss_pred cCCCeEEEEecchhhhcCHHHHHHHHHHHhhh---------------------------cCCeEEEEEeCcHHHHHHHHH
Confidence 23346899999999999999999999999876 678999999999988888888
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
+++++.. +|.|.|. ++.+++..+++.||++++| +..|++|++++|||++|+|||+++.++..|++.++.+|+++
T Consensus 249 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~---~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~ 324 (374)
T cd03801 249 AAELGLGDRVTFLGF-VPDEDLPALYAAADVFVLP---SLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVP 324 (374)
T ss_pred HHHhCCCcceEEEec-cChhhHHHHHHhcCEEEec---chhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeC
Confidence 8888874 8999997 9999999999999999997 55599999999999999999999999999999999999999
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
.|+++++++|.++
T Consensus 325 ~~~~~~l~~~i~~~ 338 (374)
T cd03801 325 PGDPEALAEAILRL 338 (374)
T ss_pred CCCHHHHHHHHHHH
Confidence 3469999998875
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-29 Score=271.34 Aligned_cols=337 Identities=14% Similarity=0.103 Sum_probs=213.4
Q ss_pred HHhhCCC----cEEEEecCCCC--------CcccccCCCceEEEEeecCCCCCCC--CcchhhHHHHHHHHHHHHHH-HH
Q 014316 28 LARQMSL----EVDVVAYGGSK--------PHAAILEHPSIHIHTMTQWPTIPRG--LPKVLKPVLLLLKPLIQFFM-LL 92 (427)
Q Consensus 28 La~~~g~----~V~vi~~~~~~--------~~~~~~~~~~i~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~ 92 (427)
|++ .|| +|+|+|-.... +...+...+|+++.++| ..+... ++++... ..++..+-.+-. +.
T Consensus 300 La~-~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp--~g~~~~~~~~~~i~k-~~l~p~l~~f~~~~~ 375 (784)
T TIGR02470 300 IKL-QGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVP--FRTENGIILRNWISR-FEIWPYLETFAEDAE 375 (784)
T ss_pred HHh-cCCCccceEEEEecCCCCccccccccccccccCCCceEEEEec--CCCCcccccccccCH-HHHHHHHHHHHHHHH
Confidence 456 499 77799954321 11233335699999999 333211 1221110 011111211111 11
Q ss_pred HHHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH---HHHHHH--HHHHHhcc
Q 014316 93 WFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF---VSIYRW--IEKYYGKM 166 (427)
Q Consensus 93 ~~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~---~~~~~~--~e~~~~~~ 166 (427)
..+... ..+||+||+|. ..+.+++.++++..++|++.+.|.++..-...+....... ..+... .|..+...
T Consensus 376 ~~~~~~~~~~pDlIHahy---~d~glva~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~ 452 (784)
T TIGR02470 376 KEILAELQGKPDLIIGNY---SDGNLVASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNA 452 (784)
T ss_pred HHHHHhcCCCCCEEEECC---CchHHHHHHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhc
Confidence 111111 25799999998 7777778999999999999999987431111000001101 111111 25677888
Q ss_pred CCEEEEcCHHHHHHH---HHhh----------------CC-----eEEEecCC-CCCCcCCCChHHHH--HHHhhhhhcc
Q 014316 167 ANGCLCVTQAMQHEL---AQNW----------------GI-----KATVLYDQ-PPEFFHPTSLEEKH--ELFCRLNKIL 219 (427)
Q Consensus 167 ad~vi~vS~~~~~~l---~~~~----------------~~-----~~~vi~n~-~~~~f~~~~~~~~~--~~~~~~~~~~ 219 (427)
||.||+.|....... ...| |+ ++.+||+| |...|.|.+...+. .+...+
T Consensus 453 AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~i---- 528 (784)
T TIGR02470 453 ADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEI---- 528 (784)
T ss_pred CCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcch----
Confidence 999999997653311 1111 11 26789999 88878776532211 010000
Q ss_pred cCCCCccccccCCCCCCCccchhhhcc-ccccccc--CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCC
Q 014316 220 HQPLGVQDCVSNGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 296 (427)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~ 296 (427)
+.-.|... .++.++. .++++ +|+++||+.+.||++.|++|+..+.+.
T Consensus 529 -------------------e~ll~~~~~~~~~~G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l---------- 578 (784)
T TIGR02470 529 -------------------EELLFSLEDNDEHYGYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKL---------- 578 (784)
T ss_pred -------------------hhhccchhhHHHHhCCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhh----------
Confidence 00000000 0111122 34455 899999999999999999999887543
Q ss_pred chhhhhhhhhcCCcccCCCCEEEEEEeCCCC------------hHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHh---
Q 014316 297 TNEEVFLKEISDGKQYLYPRLLFIITGKGPD------------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLG--- 360 (427)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~------------~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~--- 360 (427)
.+++.|+|+|+|+. .+++.++++++++. +|.|+|...+..+..++|.
T Consensus 579 -----------------~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iA 641 (784)
T TIGR02470 579 -----------------RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIA 641 (784)
T ss_pred -----------------CCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhh
Confidence 45689999998753 13456678899985 8999997346677777765
Q ss_pred -cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 361 -SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 361 -~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
.+|++|+| |..|+||++++||||||+|||+|++||+.|+|.++.+|+++ .|++++|++|.++
T Consensus 642 d~adVfV~P---S~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~l 706 (784)
T TIGR02470 642 DTKGIFVQP---ALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDF 706 (784)
T ss_pred ccCcEEEEC---CcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHH
Confidence 34799997 88899999999999999999999999999999999999999 5789999998764
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-29 Score=263.92 Aligned_cols=268 Identities=16% Similarity=0.112 Sum_probs=185.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh------cCCcEEEEecccchhhh----hhh-cCCC--chH------HHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL------RRSAFIVDWHNFGYTLL----SLS-LGRR--SHF------VSIYRWIE 160 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~------~~~p~i~~~h~~~~~~~----~~~-~~~~--~~~------~~~~~~~e 160 (427)
.+||+||+|+ ..+.+++.+++.. .++|+|+|+|+..+.-. ... .+.. ..+ ......++
T Consensus 128 ~~pDviH~hd---~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (476)
T cd03791 128 WKPDIIHCHD---WHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFL 204 (476)
T ss_pred CCCcEEEECc---hHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHH
Confidence 7899999998 4454545455444 48999999999854110 000 0000 000 00012467
Q ss_pred HHHhccCCEEEEcCHHHHHHHHHh------------hCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQN------------WGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQD 227 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~------------~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (427)
+...+.||.++++|+..++++.+. ...++.+|+|| |.+.|.|.........+..
T Consensus 205 ~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~------------- 271 (476)
T cd03791 205 KAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA------------- 271 (476)
T ss_pred HHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCc-------------
Confidence 777889999999999999887531 12358999999 7777766432110000000
Q ss_pred cccCCCCCCCccchhhhcccccccccC--CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhh
Q 014316 228 CVSNGMEGQKADETIFTSLAGIDVFLK--PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 305 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (427)
.... ....-+...+++++.+ ++. .+|+|+||+.++||++.|++|++.+.+.
T Consensus 272 ---~~~~----~~~~~k~~l~~~~g~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------- 324 (476)
T cd03791 272 ---DDLE----GKAENKAALQEELGLPVDPDA-PLFGFVGRLTEQKGIDLLLEALPELLEL------------------- 324 (476)
T ss_pred ---cccc----cHHHHHHHHHHHcCCCcCCCC-CEEEEEeeccccccHHHHHHHHHHHHHc-------------------
Confidence 0000 0000001122223332 344 4899999999999999999999998764
Q ss_pred hcCCcccCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHH
Q 014316 306 ISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD 383 (427)
Q Consensus 306 ~~~~~~~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lE 383 (427)
+++|+++|+|+. .+.++++++++ .+++.|.+. .+.+.+..+|++||++++| |..|++|++++|
T Consensus 325 ----------~~~lvi~G~g~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~~~~~~~~~aDv~l~p---S~~E~~gl~~lE 389 (476)
T cd03791 325 ----------GGQLVILGSGDPEYEEALRELAARY-PGRVAVLIG-YDEALAHLIYAGADFFLMP---SRFEPCGLTQMY 389 (476)
T ss_pred ----------CcEEEEEecCCHHHHHHHHHHHHhC-CCcEEEEEe-CCHHHHHHHHHhCCEEECC---CCCCCCcHHHHH
Confidence 489999999953 24556666655 357887766 5677788999999999997 778999999999
Q ss_pred HHcCCCcEEEeccCccccceecCC------cEEEe--CChHHHHHHHHHh
Q 014316 384 MFGCGLPVCAVSYSCIEELVKVDK------NGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 384 ama~G~PVIas~~~g~~e~v~~~~------~G~l~--~~~~~la~~l~~~ 425 (427)
||+||+|||++++||+.|++.++. +|+++ .|+++++++|.++
T Consensus 390 Ama~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~ 439 (476)
T cd03791 390 AMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRA 439 (476)
T ss_pred HhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHH
Confidence 999999999999999999999988 99999 5689999998764
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-29 Score=246.96 Aligned_cols=309 Identities=23% Similarity=0.269 Sum_probs=216.6
Q ss_pred EEEEEeCC-CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCc--eEEEEeecCCCCCCCCcchhhHHHHHH
Q 014316 7 ACVVVLGD-LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS--IHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (427)
Q Consensus 7 ~~v~~~~~-~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~--i~v~~~~~~~~~~~~~~~~~~~~~~~~ 82 (427)
+++++.+. .|+..+ +...+.+|.+. ||+|++++............... ....... ............+.
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~-g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 74 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKR-GYDVTLVVLRDEGDYLELLPSNVKLIPVRVLK------LKSLRDLLAILRLR 74 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhc-CceEEEEEcCCCCccccccccchhhhceeeee------cccccchhHHHHHH
Confidence 44444332 455555 45566777775 99999999765442221111100 0111111 01111222223333
Q ss_pred HHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHH
Q 014316 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKY 162 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~ 162 (427)
+.+. ..+||+|+++++ ....++..+..+. ++|+++++|+...... ...... ..+++.
T Consensus 75 ~~~~------------~~~~dii~~~~~--~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~-----~~~~~~---~~~~~~ 131 (353)
T cd03811 75 RLLR------------KEKPDVVISHLT--TTPNVLALLAARL-GTKLIVWEHNSLSLEL-----KRKLRL---LLLIRK 131 (353)
T ss_pred HHHH------------hcCCCEEEEcCc--cchhHHHHHHhhc-CCceEEEEcCcchhhh-----ccchhH---HHHHHh
Confidence 3332 278999999984 2333334444444 8999999999843111 000001 156778
Q ss_pred HhccCCEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 163 YGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
..+.+|.++++|+.+++.+.+.++. ++.+++|+ +...+.+...... .
T Consensus 132 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-~---------------------------- 182 (353)
T cd03811 132 LYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL-E---------------------------- 182 (353)
T ss_pred hccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh-h----------------------------
Confidence 8899999999999999999888773 48999999 5555543321000 0
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
....+++..++++|++.+.||++.+++|++.+.+. .++++
T Consensus 183 -------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~---------------------------~~~~~ 222 (353)
T cd03811 183 -------------LGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE---------------------------GPDAR 222 (353)
T ss_pred -------------cCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc---------------------------CCCce
Confidence 01123346899999999999999999999999875 67899
Q ss_pred EEEEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 319 FIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 319 l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
|+++|.|+..+.+++.++++++. +|.|.|. .+++.++++.||++++| |..|++|++++|||++|+|||+|+.|
T Consensus 223 l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~i~p---s~~e~~~~~~~Ea~~~G~PvI~~~~~ 296 (353)
T cd03811 223 LVILGDGPLREELEALAKELGLADRVHFLGF---QSNPYPYLKAADLFVLS---SRYEGFPNVLLEAMALGTPVVATDCP 296 (353)
T ss_pred EEEEcCCccHHHHHHHHHhcCCCccEEEecc---cCCHHHHHHhCCEEEeC---cccCCCCcHHHHHHHhCCCEEEcCCC
Confidence 99999999999999999999885 7999997 67899999999999997 77799999999999999999999999
Q ss_pred ccccceecCCcEEEe--CChHHHHH
Q 014316 398 CIEELVKVDKNGLLF--SSSSELAD 420 (427)
Q Consensus 398 g~~e~v~~~~~G~l~--~~~~~la~ 420 (427)
+..|++.++.+|+++ ++.+++++
T Consensus 297 ~~~e~i~~~~~g~~~~~~~~~~~~~ 321 (353)
T cd03811 297 GPREILEDGENGLLVPVGDEAALAA 321 (353)
T ss_pred ChHHHhcCCCceEEECCCCHHHHHH
Confidence 999999999999999 45677743
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-29 Score=248.74 Aligned_cols=318 Identities=21% Similarity=0.223 Sum_probs=227.3
Q ss_pred EEEEEeCCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (427)
+.++.....||.+++ ...+..|.+. ||+|.+++..............+++++.++. .. ..........+.+.+
T Consensus 3 ~~i~~~~~~gG~~~~~~~l~~~l~~~-~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~--~~---~~~~~~~~~~~~~~~ 76 (365)
T cd03807 3 LHVITGLDVGGAERMLVRLLKGLDRD-RFEHVVISLTDRGELGEELEEAGVPVYCLGK--RP---GRPDPGALLRLYKLI 76 (365)
T ss_pred EEEEeeccCccHHHHHHHHHHHhhhc-cceEEEEecCcchhhhHHHHhcCCeEEEEec--cc---ccccHHHHHHHHHHH
Confidence 334444444665554 3455666665 9999999976543333333446888888872 11 111222223333333
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHh
Q 014316 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (427)
. ..+||+||++.+. ......+.++. .+.|++++.|+..+.. .........++++.+.
T Consensus 77 ~------------~~~~div~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 134 (365)
T cd03807 77 R------------RLRPDVVHTWMYH---ADLYGGLAARLAGVPPVIWGIRHSDLDL-------GKKSTRLVARLRRLLS 134 (365)
T ss_pred H------------hhCCCEEEecccc---ccHHHHHHHHhcCCCcEEEEecCCcccc-------cchhHhHHHHHHHHhc
Confidence 2 3799999999733 22223444444 6889999999984311 1223445567788888
Q ss_pred ccCCEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 165 KMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
+.+|.++++|+..++.+.+. +. ++.+++|+ +...|.+.... .....
T Consensus 135 ~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~---------------------------- 184 (365)
T cd03807 135 SFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLDA-RARLR---------------------------- 184 (365)
T ss_pred cccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcccc-hHHHH----------------------------
Confidence 89999999999999988764 43 37889999 65555433211 11100
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
++.+.+. +...++++|++.+.||++.+++|+..+.+. .++++|+
T Consensus 185 --------~~~~~~~-~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ 228 (365)
T cd03807 185 --------EELGLPE-DTFLIGIVARLHPQKDHATLLRAAALLLKK---------------------------FPNARLL 228 (365)
T ss_pred --------HhcCCCC-CCeEEEEecccchhcCHHHHHHHHHHHHHh---------------------------CCCeEEE
Confidence 1113333 345899999999999999999999999876 7889999
Q ss_pred EEeCCCChHHHHHHHH-HcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 321 ITGKGPDKESYEEKIR-RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 321 i~G~G~~~~~~~~~~~-~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
++|.|+..+..++... ++++. +|.|.|. .+++.++|+.||++++| |..|++|++++|||+||+|||+++.|+
T Consensus 229 i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---s~~e~~~~~~~Ea~a~g~PvI~~~~~~ 302 (365)
T cd03807 229 LVGDGPDRANLELLALKELGLEDKVILLGE---RSDVPALLNALDVFVLS---SLSEGFPNVLLEAMACGLPVVATDVGD 302 (365)
T ss_pred EecCCcchhHHHHHHHHhcCCCceEEEccc---cccHHHHHHhCCEEEeC---CccccCCcHHHHHHhcCCCEEEcCCCC
Confidence 9999998888888877 77875 7999997 78999999999999997 666999999999999999999999999
Q ss_pred cccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 399 IEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 399 ~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
..|++.+ +|+++ +|+++++++|.++.
T Consensus 303 ~~e~~~~--~g~~~~~~~~~~l~~~i~~l~ 330 (365)
T cd03807 303 NAELVGD--TGFLVPPGDPEALAEAIEALL 330 (365)
T ss_pred hHHHhhc--CCEEeCCCCHHHHHHHHHHHH
Confidence 9999977 88888 57899999987753
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-29 Score=250.23 Aligned_cols=310 Identities=20% Similarity=0.243 Sum_probs=213.5
Q ss_pred hhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014316 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (427)
Q Consensus 19 ~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (427)
.++...+.+|+++ ||+|++++........... ..+.+...+ ................+.+.+ +
T Consensus 18 ~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~ 80 (364)
T cd03814 18 RTLQRLVEHLRAR-GHEVLVIAPGPFRESEGPA--RVVPVPSVP--LPGYPEIRLALPPRRRVRRLL------------D 80 (364)
T ss_pred hHHHHHHHHHHHC-CCEEEEEeCCchhhccCCC--Cceeecccc--cCcccceEecccchhhHHHHH------------H
Confidence 3456677788886 9999999976543221111 223332222 000111111111111222222 2
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||++++.. ..+.+..+++..++|+++++|+. +....... ...........+++++.+.+|.++++|+.++
T Consensus 81 ~~~pdii~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 81 AFAPDVVHIATPGP--LGLAALRAARRLGIPVVTSYHTD-FPEYLRYY-GLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred hcCCCEEEEeccch--hhHHHHHHHHHcCCCEEEEEecC-hHHHhhhc-ccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 37999999997432 22335566777899999999987 33221111 1223334446677888889999999999999
Q ss_pred HHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCC
Q 014316 179 HELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR 257 (427)
Q Consensus 179 ~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (427)
+.+.+....++.+++|+ +.+.|.+..... ..+. ... .++
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~------------------------------------~~~--~~~ 196 (364)
T cd03814 157 DELRARGFRRVRLWPRGVDTELFHPRRRDE--ALRA------------------------------------RLG--PPD 196 (364)
T ss_pred HHHhccCCCceeecCCCccccccCcccccH--HHHH------------------------------------HhC--CCC
Confidence 86655433448889999 666665432111 1000 001 223
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~ 337 (427)
+..++|+|++.+.||++.++++++.+.+ .++++|+++|+|++.+.++
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~----------------------------~~~~~l~i~G~~~~~~~~~----- 243 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRR----------------------------RPPVRLVIVGDGPARARLE----- 243 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhh----------------------------cCCceEEEEeCCchHHHHh-----
Confidence 4589999999999999999999999865 2679999999998766554
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CCh
Q 014316 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSS 415 (427)
Q Consensus 338 l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~ 415 (427)
...++|.|.|. ++.+++.++|+.||++++| |..|++|++++||||||+|||+++.++..|+++++.+|+++ .+.
T Consensus 244 ~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~~---s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~ 319 (364)
T cd03814 244 ARYPNVHFLGF-LDGEELAAAYASADVFVFP---SRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDA 319 (364)
T ss_pred ccCCcEEEEec-cCHHHHHHHHHhCCEEEEC---cccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCH
Confidence 12258999997 8999999999999999997 77799999999999999999999999999999999999999 456
Q ss_pred HHHHHHHHHhc
Q 014316 416 SELADQLLVNA 426 (427)
Q Consensus 416 ~~la~~l~~~~ 426 (427)
++++++|.++.
T Consensus 320 ~~l~~~i~~l~ 330 (364)
T cd03814 320 EAFAAALAALL 330 (364)
T ss_pred HHHHHHHHHHH
Confidence 77999998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=263.15 Aligned_cols=246 Identities=14% Similarity=0.174 Sum_probs=185.7
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEE-ecccchhhhhhhcCCCchHHHHHHHHHH--HHhccCCEEEEcC
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRWIEK--YYGKMANGCLCVT 174 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~-~h~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~~ad~vi~vS 174 (427)
+..+||+||+|+ ..+...+.+++++.+.|++++ .|++ ++.. .......-+..+.+ .+.+.+| ++++|
T Consensus 277 r~~rpDIVHt~~---~~a~l~g~laA~lagvpviv~~~h~~-~~~~-----~~r~~~~e~~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 277 CERKLDYLSVWQ---DGACLMIALAALIAGVPRIQLGLRGL-PPVV-----RKRLFKPEYEPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHcCCCEEEEcC---cccHHHHHHHHHhcCCCEEEEeeccc-CCcc-----hhhHHHHHHHHhhhhceeEecch-hhhcc
Confidence 448999999998 444445788888999999765 5653 3111 11111111111112 2244556 77889
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 175 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 175 ~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
...++.+.+.++.+ +.+|||| |...|.+.... ....+.++.
T Consensus 347 ~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~-~~~~r~~~~---------------------------------- 391 (578)
T PRK15490 347 HCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEV-PHKIWQQFT---------------------------------- 391 (578)
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchh-hHHHHHHhh----------------------------------
Confidence 99999888777765 8999999 87777664311 111111100
Q ss_pred cccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 251 ~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
...+.+. .+|+++||+.+.||+..++++++.+.+. .|+++|+|+|+|+..++
T Consensus 392 ~~l~~~~-~vIg~VgRl~~~Kg~~~LI~A~a~llk~---------------------------~pdirLvIVGdG~~~ee 443 (578)
T PRK15490 392 QKTQDAD-TTIGGVFRFVGDKNPFAWIDFAARYLQH---------------------------HPATRFVLVGDGDLRAE 443 (578)
T ss_pred hccCCCC-cEEEEEEEEehhcCHHHHHHHHHHHHhH---------------------------CCCeEEEEEeCchhHHH
Confidence 0122223 4889999999999999999999988776 68999999999999999
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 331 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 331 ~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
++++++++++ ++|.|+|. .+++..+|+.+|++|+| |..|+||++++||||||+|||+|++||.+|+|.++.+|
T Consensus 444 Lk~la~elgL~d~V~FlG~---~~Dv~~~LaaADVfVlP---S~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG 517 (578)
T PRK15490 444 AQKRAEQLGILERILFVGA---SRDVGYWLQKMNVFILF---SRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSG 517 (578)
T ss_pred HHHHHHHcCCCCcEEECCC---hhhHHHHHHhCCEEEEc---ccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcE
Confidence 9999999999 58999998 78999999999999997 78899999999999999999999999999999999999
Q ss_pred EEe--CChHHHHHHH
Q 014316 410 LLF--SSSSELADQL 422 (427)
Q Consensus 410 ~l~--~~~~~la~~l 422 (427)
+++ +|++++++++
T Consensus 518 ~LVp~~D~~aLa~ai 532 (578)
T PRK15490 518 FILDDAQTVNLDQAC 532 (578)
T ss_pred EEECCCChhhHHHHH
Confidence 999 4555666554
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=251.94 Aligned_cols=218 Identities=13% Similarity=0.127 Sum_probs=174.2
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
+..++|+||+|+.... .. +++..++|+|+++|+..+. .... ........+.++++|+..
T Consensus 84 ~~~~~Divh~~~~~~~---~~---~~~~~~~~~v~~~h~~~~~-------~~~~--------~~~~~~~~~~~~~~s~~~ 142 (335)
T cd03802 84 AAGDFDIVHNHSLHLP---LP---FARPLPVPVVTTLHGPPDP-------ELLK--------LYYAARPDVPFVSISDAQ 142 (335)
T ss_pred hcCCCCEEEecCcccc---hh---hhcccCCCEEEEecCCCCc-------ccch--------HHHhhCcCCeEEEecHHH
Confidence 3478999999983322 21 5667789999999988431 1110 122345688999999999
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 178 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
++.+... .++.+|||| |.+.|.+.+ .
T Consensus 143 ~~~~~~~--~~~~vi~ngvd~~~~~~~~--------------------------------------------------~- 169 (335)
T cd03802 143 RRPWPPL--PWVATVHNGIDLDDYPFRG--------------------------------------------------P- 169 (335)
T ss_pred Hhhcccc--cccEEecCCcChhhCCCCC--------------------------------------------------C-
Confidence 9876543 558899999 766664321 1
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~ 336 (427)
+...++|+||+.+.||++.++++++. .+++|+++|+|+..+.+...++
T Consensus 170 ~~~~i~~~Gr~~~~Kg~~~li~~~~~--------------------------------~~~~l~i~G~~~~~~~~~~~~~ 217 (335)
T cd03802 170 KGDYLLFLGRISPEKGPHLAIRAARR--------------------------------AGIPLKLAGPVSDPDYFYREIA 217 (335)
T ss_pred CCCEEEEEEeeccccCHHHHHHHHHh--------------------------------cCCeEEEEeCCCCHHHHHHHHH
Confidence 12379999999999999999998753 3689999999988877777766
Q ss_pred HcC-C-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC
Q 014316 337 RLR-L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 413 (427)
Q Consensus 337 ~l~-l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~ 413 (427)
+.. + ++|.|+|. ++.+++.++++.+|++++| |. .|++|++++||||||+|||+|+.||..|++.++.+|++++
T Consensus 218 ~~~~~~~~v~~~G~-~~~~~~~~~~~~~d~~v~p---s~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~ 293 (335)
T cd03802 218 PELLDGPDIEYLGE-VGGAEKAELLGNARALLFP---ILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVD 293 (335)
T ss_pred HhcccCCcEEEeCC-CCHHHHHHHHHhCcEEEeC---CcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeC
Confidence 654 3 68999998 9999999999999999997 54 5999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHh
Q 014316 414 SSSELADQLLVN 425 (427)
Q Consensus 414 ~~~~la~~l~~~ 425 (427)
+.++++++|..+
T Consensus 294 ~~~~l~~~l~~l 305 (335)
T cd03802 294 SVEELAAAVARA 305 (335)
T ss_pred CHHHHHHHHHHH
Confidence 899999999875
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-29 Score=261.76 Aligned_cols=268 Identities=13% Similarity=0.107 Sum_probs=187.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-------cCCcEEEEecccchhhh----hh-hcCCCchHHHHH-----HHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYTLL----SL-SLGRRSHFVSIY-----RWIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~----~~-~~~~~~~~~~~~-----~~~e~~ 162 (427)
.+|||||+|+ +.+.++..+++.. .++|+|+|+|+..+.-. .. ..-....+.... ..+.+.
T Consensus 140 ~~pDiiH~hd---w~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~ 216 (489)
T PRK14098 140 WKPDIIHCHD---WYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYT 216 (489)
T ss_pred CCCCEEEecC---cHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHH
Confidence 5899999998 5555555555432 38999999999754100 00 000000000000 123455
Q ss_pred HhccCCEEEEcCHHHHHHHHHh----hC---------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCcccc
Q 014316 163 YGKMANGCLCVTQAMQHELAQN----WG---------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDC 228 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~----~~---------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (427)
..+.||.|++||+..+++++.. +| .++.+|+|| |.+.|.|..... +..++..
T Consensus 217 ~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~---~~~~~~~----------- 282 (489)
T PRK14098 217 GVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKL---IKKRYSI----------- 282 (489)
T ss_pred HHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCccccc---ccccCCc-----------
Confidence 6688999999999999988652 22 348999999 888887653110 0000000
Q ss_pred ccCCCCCCCccchhhhcccccccccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhc
Q 014316 229 VSNGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEIS 307 (427)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 307 (427)
. ..+....+ +..+++.++++. .+..+|+++||+.++||++.|++|+..+.+
T Consensus 283 -~-~~~~k~~~----k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~---------------------- 334 (489)
T PRK14098 283 -E-RLDGKLEN----KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE---------------------- 334 (489)
T ss_pred -c-hhhhHHHH----HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh----------------------
Confidence 0 00000000 001122234432 123489999999999999999999999864
Q ss_pred CCcccCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH
Q 014316 308 DGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 308 ~~~~~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam 385 (427)
++++|+|+|+|+. .+.+++++++++ ++|.|+|. ++.+++..+|++||++++| |..|+||++.+|||
T Consensus 335 -------~~~~lvivG~G~~~~~~~l~~l~~~~~-~~V~~~g~-~~~~~~~~~~a~aDi~l~P---S~~E~~Gl~~lEAm 402 (489)
T PRK14098 335 -------LDIQLVICGSGDKEYEKRFQDFAEEHP-EQVSVQTE-FTDAFFHLAIAGLDMLLMP---GKIESCGMLQMFAM 402 (489)
T ss_pred -------cCcEEEEEeCCCHHHHHHHHHHHHHCC-CCEEEEEe-cCHHHHHHHHHhCCEEEeC---CCCCCchHHHHHHH
Confidence 2699999999974 467888888874 58999998 8888999999999999998 88899999999999
Q ss_pred cCCCcEEEeccCccccceec----CCcEEEe--CChHHHHHHHHH
Q 014316 386 GCGLPVCAVSYSCIEELVKV----DKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 386 a~G~PVIas~~~g~~e~v~~----~~~G~l~--~~~~~la~~l~~ 424 (427)
+||+|+|++++||..|.+.+ +.+|+++ .|+++|+++|.+
T Consensus 403 a~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~ 447 (489)
T PRK14098 403 SYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGE 447 (489)
T ss_pred hCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHH
Confidence 99999999999999998864 6799999 578999999875
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=247.27 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=197.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..++|+||++.+ .....++.+.++..++|+++++|+..+.. . ......+..++...+.+|.++++|+.++
T Consensus 91 ~~~~dii~~~~~--~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------~--~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 160 (377)
T cd03798 91 RFRPDLIHAHFA--YPDGFAAALLKRKLGIPLVVTLHGSDVNL------L--PRKRLLRALLRRALRRADAVIAVSEALA 160 (377)
T ss_pred cCCCCEEEEecc--chHHHHHHHHHHhcCCCEEEEeecchhcc------c--CchhhHHHHHHHHHhcCCeEEeCCHHHH
Confidence 479999999963 33444466677777899999999884311 0 1111446667778889999999999999
Q ss_pred HHHHHh--hCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQN--WGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~--~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. ...++.+++|+ +...+.+...... + + ....
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---~-------------------------------------~~~~ 199 (377)
T cd03798 161 DELKALGIDPEKVTVIPNGVDTERFSPADRAEA-R---K-------------------------------------LGLP 199 (377)
T ss_pred HHHHHhcCCCCceEEcCCCcCcccCCCcchHHH-H---h-------------------------------------ccCC
Confidence 999876 34458999999 6666654432111 0 0 0122
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
++...++++|++.+.||++.++++++.+.+. .++++|+++|.|+..+.+++.+
T Consensus 200 ~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~---------------------------~~~~~l~i~g~~~~~~~~~~~~ 252 (377)
T cd03798 200 EDKKVILFVGRLVPRKGIDYLIEALARLLKK---------------------------RPDVHLVIVGDGPLREALEALA 252 (377)
T ss_pred CCceEEEEeccCccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEcCCcchHHHHHHH
Confidence 3346899999999999999999999998765 6789999999999888899999
Q ss_pred HHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--
Q 014316 336 RRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-- 412 (427)
Q Consensus 336 ~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~-- 412 (427)
+++++. +|.+.|. ++.+++..++++||++++| +..|++|.+++|||++|+|||+++.++..|++.++.+|+++
T Consensus 253 ~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~~---~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~ 328 (377)
T cd03798 253 AELGLEDRVTFLGA-VPHEEVPAYYAAADVFVLP---SLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPP 328 (377)
T ss_pred HhcCCcceEEEeCC-CCHHHHHHHHHhcCeeecc---hhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECC
Confidence 988885 8999997 9999999999999999997 66699999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHhc
Q 014316 413 SSSSELADQLLVNA 426 (427)
Q Consensus 413 ~~~~~la~~l~~~~ 426 (427)
+|+++++++|.++.
T Consensus 329 ~~~~~l~~~i~~~~ 342 (377)
T cd03798 329 GDPEALAEAILRLL 342 (377)
T ss_pred CCHHHHHHHHHHHh
Confidence 57899999998763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-29 Score=267.48 Aligned_cols=270 Identities=14% Similarity=0.134 Sum_probs=184.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh------hcCCcEEEEecccchhhhh----hh-cCCC-chHH---H----HHHH--
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLS----LS-LGRR-SHFV---S----IYRW-- 158 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~------~~~~p~i~~~h~~~~~~~~----~~-~~~~-~~~~---~----~~~~-- 158 (427)
.+|||||+|+ +.+.+++.++.. +.++|+|+|+|+..|.-.. .. .+-. ..+. . ++..
T Consensus 609 ~~PDIIH~HD---W~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN 685 (977)
T PLN02939 609 KKPDIIHCHD---WQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRIN 685 (977)
T ss_pred CCCCEEEECC---ccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchH
Confidence 6899999999 444443222211 3568999999999763210 00 0000 0000 0 0000
Q ss_pred HHHHHhccCCEEEEcCHHHHHHHHHhhC-----------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCcc
Q 014316 159 IEKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQ 226 (427)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~-----------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (427)
+-+....+||.|+|||...++++...+| .++.+|+|| |.+.|.|..... +..++.
T Consensus 686 ~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~---L~~~Ys---------- 752 (977)
T PLN02939 686 VVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRF---LKVQYN---------- 752 (977)
T ss_pred HHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccc---cccccC----------
Confidence 1122233699999999999999876433 137899999 888887653110 000000
Q ss_pred ccccCCCCCCCccchhhhcccccccccCCC--CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhh
Q 014316 227 DCVSNGMEGQKADETIFTSLAGIDVFLKPN--RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 304 (427)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~ 304 (427)
+. ...+...+. ..++++++++.+ ...+|+++||+.++||++.|++|+..+.+
T Consensus 753 --~~-dl~GK~~nK----~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~------------------- 806 (977)
T PLN02939 753 --AN-DLQGKAANK----AALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE------------------- 806 (977)
T ss_pred --hh-hhhhhhhhh----HHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh-------------------
Confidence 00 000000001 113334455532 23489999999999999999999988753
Q ss_pred hhcCCcccCCCCEEEEEEeCCCCh---HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchH
Q 014316 305 EISDGKQYLYPRLLFIITGKGPDK---ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMK 380 (427)
Q Consensus 305 ~~~~~~~~~~~~~~l~i~G~G~~~---~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ 380 (427)
++++|+|+|+|++. +.+++++++++.. +|.|+|. .+......+|++||++|+| |..|+||++
T Consensus 807 ----------~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~-~de~lah~IYAaADIFLmP---Sr~EPfGLv 872 (977)
T PLN02939 807 ----------LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILK-YDEALSHSIYAASDMFIIP---SMFEPCGLT 872 (977)
T ss_pred ----------cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEec-cCHHHHHHHHHhCCEEEEC---CCccCCcHH
Confidence 36899999999863 5678888888874 7999997 6666678999999999998 888999999
Q ss_pred HHHHHcCCCcEEEeccCccccceec---------CCcEEEe--CChHHHHHHHHHh
Q 014316 381 VVDMFGCGLPVCAVSYSCIEELVKV---------DKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 381 ~lEama~G~PVIas~~~g~~e~v~~---------~~~G~l~--~~~~~la~~l~~~ 425 (427)
++|||+||+|+|++++||+.|+|.+ +.+|+++ .|+++|+++|.++
T Consensus 873 qLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 873 QMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 9999999999999999999999975 5789999 5788999888754
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=266.37 Aligned_cols=244 Identities=19% Similarity=0.253 Sum_probs=193.2
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhh-hhc-------C-CCchHHHHHHHHHHHHhccCCE
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSL-------G-RRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~-~~~-------~-~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
..++|++|+|++. .+.+++.++++..++|+|+|.|+. |+... ... . .+..+.++++++++.+++.||.
T Consensus 171 ~~~~dviH~~s~~--~~g~~~~~~~~~~~~p~I~t~Hg~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ 247 (475)
T cd03813 171 LPKADVYHAVSTG--YAGLLGALAKARRGTPFLLTEHGI-YTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADR 247 (475)
T ss_pred CCCCCEEeccCcc--hHHHHHHHHHHHhCCCEEEecCCc-cHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4689999999743 233446777888899999999997 42110 000 0 1122344567788899999999
Q ss_pred EEEcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 170 CLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
|+++|+..++...+ +|.+ +.+|||| +.+.|.+....
T Consensus 248 Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~--------------------------------------- 287 (475)
T cd03813 248 ITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA--------------------------------------- 287 (475)
T ss_pred EEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc---------------------------------------
Confidence 99999999887654 4553 8999999 76666543210
Q ss_pred ccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC
Q 014316 246 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 325 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G 325 (427)
....++..|+|+||+.+.||++.+++|++.+.+. .|+++|+|+|+|
T Consensus 288 -------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~IvG~g 333 (475)
T cd03813 288 -------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK---------------------------IPDAEGWVIGPT 333 (475)
T ss_pred -------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEECCC
Confidence 0122345899999999999999999999999876 789999999998
Q ss_pred CC----hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc
Q 014316 326 PD----KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 326 ~~----~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~ 400 (427)
+. .++++++++++++ ++|.|+| .+++.++|+++|++|+| |..|++|++++||||||+|||+|++|+++
T Consensus 334 ~~~~~~~~e~~~li~~l~l~~~V~f~G----~~~v~~~l~~aDv~vlp---S~~Eg~p~~vlEAma~G~PVVatd~g~~~ 406 (475)
T cd03813 334 DEDPEYAEECRELVESLGLEDNVKFTG----FQNVKEYLPKLDVLVLT---SISEGQPLVILEAMAAGIPVVATDVGSCR 406 (475)
T ss_pred CcChHHHHHHHHHHHHhCCCCeEEEcC----CccHHHHHHhCCEEEeC---chhhcCChHHHHHHHcCCCEEECCCCChH
Confidence 53 3456788889998 5899998 67899999999999997 77799999999999999999999999999
Q ss_pred cceec------CCcEEEe--CChHHHHHHHHHhc
Q 014316 401 ELVKV------DKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 401 e~v~~------~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|++.+ |.+|+++ +|++++|++|.++.
T Consensus 407 elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll 440 (475)
T cd03813 407 ELIEGADDEALGPAGEVVPPADPEALARAILRLL 440 (475)
T ss_pred HHhcCCcccccCCceEEECCCCHHHHHHHHHHHh
Confidence 99988 5699999 67899999998764
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=259.73 Aligned_cols=197 Identities=20% Similarity=0.315 Sum_probs=157.9
Q ss_pred HHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe--EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCC
Q 014316 156 YRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232 (427)
Q Consensus 156 ~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (427)
+.+++++..+.||.++|+|+.+++.+.+.|+.+ +.++||+ +.+.+...+.
T Consensus 210 ~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~--------------------------- 262 (463)
T PLN02949 210 FAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPL--------------------------- 262 (463)
T ss_pred HHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCc---------------------------
Confidence 344677778999999999999999998877653 7889987 4333321110
Q ss_pred CCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCccc
Q 014316 233 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 312 (427)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (427)
....+ ...++++||+.++||++.+|+|++.+.++...
T Consensus 263 -------------------~~~~~-~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~----------------------- 299 (463)
T PLN02949 263 -------------------ERSED-PPYIISVAQFRPEKAHALQLEAFALALEKLDA----------------------- 299 (463)
T ss_pred -------------------cccCC-CCEEEEEEeeeccCCHHHHHHHHHHHHHhccc-----------------------
Confidence 00112 23799999999999999999999988753100
Q ss_pred CCCCEEEEEEeCCCCh------HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH
Q 014316 313 LYPRLLFIITGKGPDK------ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 313 ~~~~~~l~i~G~G~~~------~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam 385 (427)
..|+++|+|+|+|+.. +++++++++++++ +|+|+|. ++.+++.++|+.||+++.| |..|+||++++|||
T Consensus 300 ~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~-v~~~el~~ll~~a~~~v~~---s~~E~FGivvlEAM 375 (463)
T PLN02949 300 DVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKN-VSYRDLVRLLGGAVAGLHS---MIDEHFGISVVEYM 375 (463)
T ss_pred cCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCC-CCHHHHHHHHHhCcEEEeC---CccCCCChHHHHHH
Confidence 1468999999998532 4678889999995 7999998 9999999999999999975 77899999999999
Q ss_pred cCCCcEEEeccCccc-cceec---CCcEEEeCChHHHHHHHHHhc
Q 014316 386 GCGLPVCAVSYSCIE-ELVKV---DKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 386 a~G~PVIas~~~g~~-e~v~~---~~~G~l~~~~~~la~~l~~~~ 426 (427)
|||+|||+++.||.. |++.+ +.+|++++|++++|++|.++.
T Consensus 376 A~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll 420 (463)
T PLN02949 376 AAGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVL 420 (463)
T ss_pred HcCCcEEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHH
Confidence 999999999998864 77765 678999999999999998764
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-29 Score=241.26 Aligned_cols=297 Identities=22% Similarity=0.263 Sum_probs=209.4
Q ss_pred CCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 16 ~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (427)
|+..+. ...+..|++. ||+|++++..... ........++.+..++. ...............+.+.+
T Consensus 13 gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l--------- 79 (348)
T cd03820 13 GGAERVLSNLANALAEK-GHEVTIISLDKGE-PPFYELDPKIKVIDLGD--KRDSKLLARFKKLRRLRKLL--------- 79 (348)
T ss_pred CChHHHHHHHHHHHHhC-CCeEEEEecCCCC-CCccccCCccceeeccc--ccccchhccccchHHHHHhh---------
Confidence 454443 3455677765 9999999977654 12222344677777662 11111111111222222222
Q ss_pred HHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcC-CcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~-~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
+..+||+|+++.+. ....+.....+ +|++++.|+.... ... .......++.+.+.+|.++++
T Consensus 80 ---~~~~~d~i~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~d~ii~~ 142 (348)
T cd03820 80 ---KNNKPDVVISFLTS-----LLTFLASLGLKIVKLIVSEHNSPDA-------YKK--RLRRLLLRRLLYRRADAVVVL 142 (348)
T ss_pred ---cccCCCEEEEcCch-----HHHHHHHHhhccccEEEecCCCccc-------hhh--hhHHHHHHHHHHhcCCEEEEe
Confidence 23799999999854 11222333344 4999999987321 111 111122578888999999999
Q ss_pred CHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 174 TQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 174 S~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
|+.++.......+.++.+++|+ +...+.+.
T Consensus 143 s~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------------------------------------------------- 173 (348)
T cd03820 143 TEEDRALYYKKFNKNVVVIPNPLPFPPEEPS------------------------------------------------- 173 (348)
T ss_pred CHHHHHHhhccCCCCeEEecCCcChhhcccc-------------------------------------------------
Confidence 9999733333334458999998 43332111
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
..++...++++|++.+.||++.+++|++.+.+. .|+++|.++|+|++.+.++
T Consensus 174 -~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~ 225 (348)
T cd03820 174 -SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKK---------------------------HPDWKLRIVGDGPEREALE 225 (348)
T ss_pred -CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEeCCCCHHHHH
Confidence 012234899999999999999999999999765 7899999999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCcEE
Q 014316 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGL 410 (427)
Q Consensus 333 ~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~G~ 410 (427)
+.++++++. +|.|.|. .+++..+|++||++++| |..|++|++++|||+||+|||+++.+ +..+++.++.+|+
T Consensus 226 ~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~i~p---s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~ 299 (348)
T cd03820 226 ALIKELGLEDRVILLGF---TKNIEEYYAKASIFVLT---SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGL 299 (348)
T ss_pred HHHHHcCCCCeEEEcCC---cchHHHHHHhCCEEEeC---ccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceE
Confidence 999999885 7999997 89999999999999997 66799999999999999999999964 5677777777999
Q ss_pred Ee--CChHHHHHHHHHh
Q 014316 411 LF--SSSSELADQLLVN 425 (427)
Q Consensus 411 l~--~~~~~la~~l~~~ 425 (427)
++ .|+++++++|.++
T Consensus 300 ~~~~~~~~~~~~~i~~l 316 (348)
T cd03820 300 LVPNGDVEALAEALLRL 316 (348)
T ss_pred EeCCCCHHHHHHHHHHH
Confidence 99 4569999999876
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-28 Score=242.05 Aligned_cols=243 Identities=19% Similarity=0.193 Sum_probs=179.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHH---HhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC-H
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWA---SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT-Q 175 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~---~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS-~ 175 (427)
.+||+||++.............+ ....++|+|+++|+... .... ....++++.+.+.+|.++|+| +
T Consensus 75 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------~~~~---~~~~~~~~~~~~~~d~ii~~s~~ 144 (366)
T cd03822 75 SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLL-------HEPR---PGDRALLRLLLRRADAVIVMSSE 144 (366)
T ss_pred cCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCc-------cccc---hhhhHHHHHHHhcCCEEEEeeHH
Confidence 79999999863222111111222 23478999999999711 0111 123456677788999999996 4
Q ss_pred HHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 176 AMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 176 ~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
..++.+...+..++.+++|+ +...+.+... ..+ ...
T Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~-----------------------------------------~~~ 181 (366)
T cd03822 145 LLRALLLRAYPEKIAVIPHGVPDPPAEPPES--LKA-----------------------------------------LGG 181 (366)
T ss_pred HHHHHHhhcCCCcEEEeCCCCcCcccCCchh--hHh-----------------------------------------hcC
Confidence 44444443323568999999 5444433211 000 111
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH-
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE- 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~- 333 (427)
..+...++|+|++.+.||++.+++|++.+.++ .++++|+++|+|+.......
T Consensus 182 ~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 234 (366)
T cd03822 182 LDGRPVLLTFGLLRPYKGLELLLEALPLLVAK---------------------------HPDVRLLVAGETHPDLERYRG 234 (366)
T ss_pred CCCCeEEEEEeeccCCCCHHHHHHHHHHHHhh---------------------------CCCeEEEEeccCccchhhhhh
Confidence 22345899999999999999999999999876 68999999999865443322
Q ss_pred ----HHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCC--CCchHHHHHHcCCCcEEEeccCccccceecC
Q 014316 334 ----KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL--DLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 406 (427)
Q Consensus 334 ----~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e--~~p~~~lEama~G~PVIas~~~g~~e~v~~~ 406 (427)
+++++++. +|.|.|.|++.+++.++|+.||++++| |..| ++|++++||||||+|||+|+.|+ .+.+.++
T Consensus 235 ~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~p---s~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~ 310 (366)
T cd03822 235 EAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLP---YRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDG 310 (366)
T ss_pred hhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEec---ccccccccchHHHHHHHcCCCEEecCCCC-hheeeeC
Confidence 37888885 899999889999999999999999997 6677 99999999999999999999999 7778889
Q ss_pred CcEEEe--CChHHHHHHHHHhc
Q 014316 407 KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 407 ~~G~l~--~~~~~la~~l~~~~ 426 (427)
.+|+++ +|.++++++|..+.
T Consensus 311 ~~g~~~~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 311 GTGLLVPPGDPAALAEAIRRLL 332 (366)
T ss_pred CCcEEEcCCCHHHHHHHHHHHH
Confidence 999999 56899999998764
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-28 Score=254.41 Aligned_cols=244 Identities=12% Similarity=0.075 Sum_probs=179.1
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHH-HHHHHHHHHhcc-CCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS-IYRWIEKYYGKM-ANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~-ad~vi~vS~~~ 177 (427)
.+|||||+++|..+...-.+..+++..+ |+|.++|.- |..+....+ ...... +.+++.+++.+. ||.|+++|..+
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTn-y~eYl~~y~-~g~L~~~llk~l~~~v~r~hcD~VIaPS~at 509 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTN-YLEYIKREK-NGALQAFFVKHINNWVTRAYCHKVLRLSAAT 509 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCC-cHHHHhHhc-chhHHHHHHHHHHHHHHHhhCCEEEcCCHHH
Confidence 7999999999765433211444555566 888888866 433322221 122222 223444444432 89999999888
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 178 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
++ +. .......|| |.++|.|....... .++ +....
T Consensus 510 q~-L~----~~vI~nVnGVDte~F~P~~r~~~~---r~l------------------------------------gi~~~ 545 (794)
T PLN02501 510 QD-LP----KSVICNVHGVNPKFLKIGEKVAEE---REL------------------------------------GQQAF 545 (794)
T ss_pred HH-hc----ccceeecccccccccCCcchhHHH---Hhc------------------------------------CCccc
Confidence 83 32 121111258 88888876421111 111 11111
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~ 336 (427)
+..++|+||+.++||++.|++|++.+.+. .|+++|+|+|+||+.++++++++
T Consensus 546 -~kgiLfVGRLa~EKGld~LLeAla~L~~~---------------------------~pnvrLvIVGDGP~reeLe~la~ 597 (794)
T PLN02501 546 -SKGAYFLGKMVWAKGYRELIDLLAKHKNE---------------------------LDGFNLDVFGNGEDAHEVQRAAK 597 (794)
T ss_pred -cCceEEEEcccccCCHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCccHHHHHHHHH
Confidence 12488999999999999999999998765 68899999999999999999999
Q ss_pred HcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChH
Q 014316 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 416 (427)
Q Consensus 337 ~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~ 416 (427)
++++ +|.|+|. .++...+|+.+|++|+| |..|+||++++||||||+|||+++++|. +++.++.+|++++|.+
T Consensus 598 eLgL-~V~FLG~---~dd~~~lyasaDVFVlP---S~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~~D~E 669 (794)
T PLN02501 598 RLDL-NLNFLKG---RDHADDSLHGYKVFINP---SISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTYKTSE 669 (794)
T ss_pred HcCC-EEEecCC---CCCHHHHHHhCCEEEEC---CCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEecCCHH
Confidence 9887 5999998 78888999999999998 8889999999999999999999999985 4577889999999999
Q ss_pred HHHHHHHHhc
Q 014316 417 ELADQLLVNA 426 (427)
Q Consensus 417 ~la~~l~~~~ 426 (427)
+++++|.++.
T Consensus 670 afAeAI~~LL 679 (794)
T PLN02501 670 DFVAKVKEAL 679 (794)
T ss_pred HHHHHHHHHH
Confidence 9999988753
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=241.50 Aligned_cols=251 Identities=20% Similarity=0.233 Sum_probs=187.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHH-H-HHHHHHHHhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS-I-YRWIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~-~-~~~~e~~~~~~ad~vi~vS~~ 176 (427)
..++|+||+|++....... +...++..++|++++.|+... .... ....+.+ + ..+.++...+.++.+++.|+.
T Consensus 85 ~~~~dii~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~ 159 (375)
T cd03821 85 IREADIVHVHGLWSYPSLA-AARAARKYGIPYVVSPHGMLD-PWAL---PHKALKKRLAWFLFERRLLQAAAAVHATSEQ 159 (375)
T ss_pred CCCCCEEEEecccchHHHH-HHHHHHHhCCCEEEEcccccc-cccc---ccchhhhHHHHHHHHHHHHhcCCEEEECCHH
Confidence 4789999999865544444 444555678999999998732 1110 1112211 1 234567777889999999987
Q ss_pred HHHHHHHhh-CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 177 MQHELAQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 177 ~~~~l~~~~-~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
......... ..++.++||+ +.+.|.+...... +. ....
T Consensus 160 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~------------------------------------~~~~- 199 (375)
T cd03821 160 EAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGR---RR------------------------------------KFPI- 199 (375)
T ss_pred HHHHHHhhCCcccEEEcCCCcChhccCcchhhhh---hh------------------------------------hccC-
Confidence 777665432 3348999999 6666654321110 00 0122
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYE 332 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~~~ 332 (427)
.++...++|+|++.+.||++.+++|+..+.++ .++++|+++|.|+. ...++
T Consensus 200 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 252 (375)
T cd03821 200 LPDKRIILFLGRLHPKKGLDLLIEAFAKLAER---------------------------FPDWHLVIAGPDEGGYRAELK 252 (375)
T ss_pred CCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEECCCCcchHHHHH
Confidence 23345899999999999999999999999876 78999999998753 34455
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEE
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
.+++++++ ++|.|+|. ++.+++..+|+.||++++| |..|++|++++|||+||+|||+|+.+|..|++.+ ..|++
T Consensus 253 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~ 327 (375)
T cd03821 253 QIAAALGLEDRVTFTGM-LYGEDKAAALADADLFVLP---SHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWV 327 (375)
T ss_pred HHHHhcCccceEEEcCC-CChHHHHHHHhhCCEEEec---cccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEE
Confidence 55678888 48999997 9999999999999999997 7779999999999999999999999999999988 88999
Q ss_pred e-CChHHHHHHHHHhc
Q 014316 412 F-SSSSELADQLLVNA 426 (427)
Q Consensus 412 ~-~~~~~la~~l~~~~ 426 (427)
+ ++.++++++|.++.
T Consensus 328 ~~~~~~~~~~~i~~l~ 343 (375)
T cd03821 328 VDDDVDALAAALRRAL 343 (375)
T ss_pred eCCChHHHHHHHHHHH
Confidence 8 45599999988763
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=250.84 Aligned_cols=319 Identities=11% Similarity=0.066 Sum_probs=199.6
Q ss_pred cceEEEEEeCCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCcccccCCCce-EEEEeecCCCCCCCCcchhhHH---
Q 014316 4 RGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSI-HIHTMTQWPTIPRGLPKVLKPV--- 78 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~-~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i-~v~~~~~~~~~~~~~~~~~~~~--- 78 (427)
||.+.|.+....|+.+++.. .+..+.++ ||+|+++...+..+.... ...++ ..+.+. +. +.......
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~-G~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~--~~----~~~~~~~~~~~ 72 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQ-GLASHFVYGYGKGGKESV-SHQNYPQVIKHT--PR----MTAMANIALFR 72 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhc-CCeEEEEEecCCCccccc-ccCCcceEEEec--cc----HHHHHHHHHHH
Confidence 56778888888899898654 45666665 999999987654322211 11122 222222 11 10010000
Q ss_pred ---HHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCCh--hHHHHHHH----HHhhcCCcEEEEecccchhhh-------
Q 014316 79 ---LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSV--PTLVAVKW----ASSLRRSAFIVDWHNFGYTLL------- 142 (427)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~--~~~~~~~~----~~~~~~~p~i~~~h~~~~~~~------- 142 (427)
+..+..+..+. .++.+..+|||||+|+-... ....+..+ ..+..++|+|+|.||. |...
T Consensus 73 ~~~~~~~~~~~~~~----~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~-~~~tg~c~~~~ 147 (405)
T PRK10125 73 LFNRDLFGNFNELY----RTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDH-WSVTGRCAFTD 147 (405)
T ss_pred hcchhhcchHHHHH----HHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccc-cccCCCcCCCc
Confidence 00011111111 11213479999999984321 11111111 1234578999999998 5332
Q ss_pred ---hhhcC----------CC---chHHHHH---HHHHHHHhccCCEEEEcCHHHHHHHHHhhCC-eEEEecCC-CCCCcC
Q 014316 143 ---SLSLG----------RR---SHFVSIY---RWIEKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQ-PPEFFH 201 (427)
Q Consensus 143 ---~~~~~----------~~---~~~~~~~---~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~-~~~~f~ 201 (427)
....+ .. ....+.+ +..-+.+.+.++.+|++|+..++.+.+.++. ++.+|||| |.+.+.
T Consensus 148 ~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~~ 227 (405)
T PRK10125 148 GCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEA 227 (405)
T ss_pred ccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCccccc
Confidence 00000 00 0011111 2222233346789999999999988776664 48999999 653322
Q ss_pred CCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeec--CCCCCHHHHHHH
Q 014316 202 PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEA 279 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~--~~~K~~~~Li~a 279 (427)
..+.. .. . ..++++ .+|+++|+. .+.||++.|++|
T Consensus 228 ~~~~~--~~------------------------------------~----~~~~~~-~~il~v~~~~~~~~Kg~~~li~A 264 (405)
T PRK10125 228 ILAEL--PP------------------------------------V----RETQGK-PKIAVVAHDLRYDGKTDQQLVRE 264 (405)
T ss_pred ccccc--cc------------------------------------c----ccCCCC-CEEEEEEeccccCCccHHHHHHH
Confidence 21100 00 0 011223 478999984 367999999999
Q ss_pred HHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHH
Q 014316 280 ALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359 (427)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l 359 (427)
++.+ .++++|+|+|+|+... .++|.++|..-+.+++.++|
T Consensus 265 ~~~l------------------------------~~~~~L~ivG~g~~~~----------~~~v~~~g~~~~~~~l~~~y 304 (405)
T PRK10125 265 MMAL------------------------------GDKIELHTFGKFSPFT----------AGNVVNHGFETDKRKLMSAL 304 (405)
T ss_pred HHhC------------------------------CCCeEEEEEcCCCccc----------ccceEEecCcCCHHHHHHHH
Confidence 9875 2469999999986321 13688888733578899999
Q ss_pred hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHH
Q 014316 360 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQL 422 (427)
Q Consensus 360 ~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l 422 (427)
++||++|+| |..|+||++++||||||+|||+|++||++|++.++ +|+++ +|+++||+.+
T Consensus 305 ~~aDvfV~p---S~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~ 365 (405)
T PRK10125 305 NQMDALVFS---SRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS 365 (405)
T ss_pred HhCCEEEEC---CccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhcc
Confidence 999999997 88899999999999999999999999999999765 89999 6788998754
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-29 Score=248.67 Aligned_cols=230 Identities=17% Similarity=0.200 Sum_probs=176.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccc---hhh---hhhhcCCC-----chHHHHHHHHHHHHhccC
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG---YTL---LSLSLGRR-----SHFVSIYRWIEKYYGKMA 167 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~---~~~---~~~~~~~~-----~~~~~~~~~~e~~~~~~a 167 (427)
..++|+|+++++. . +..+....+.|.+.++|... |.. .....+.. ......++.+++...+++
T Consensus 81 ~~~~D~v~~~~~~---~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (351)
T cd03804 81 LSGYDLVISSSHA---V---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARV 154 (351)
T ss_pred ccCCCEEEEcCcH---H---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCC
Confidence 3789999988721 1 11122456788899988641 111 11111111 112344566777788999
Q ss_pred CEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 168 NGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
|.++++|+.+++.+.+.++.+..+++|+ +.+.|.+..
T Consensus 155 d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~------------------------------------------ 192 (351)
T cd03804 155 DYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE------------------------------------------ 192 (351)
T ss_pred CEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC------------------------------------------
Confidence 9999999999999988788788899998 544443211
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
... ..++|+|++.+.||++.+++|++.+ + ++|+|+|+|+
T Consensus 193 --------~~~-~~il~~G~~~~~K~~~~li~a~~~~-------------------------------~-~~l~ivG~g~ 231 (351)
T cd03804 193 --------EKE-DYYLSVGRLVPYKRIDLAIEAFNKL-------------------------------G-KRLVVIGDGP 231 (351)
T ss_pred --------CCC-CEEEEEEcCccccChHHHHHHHHHC-------------------------------C-CcEEEEECCh
Confidence 112 3689999999999999999999763 4 7899999998
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecC
Q 014316 327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 406 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~ 406 (427)
..+++++ ...++|+|+|. ++.+++.++|++||++++| |. |++|++++||||||+|||+++.||..|++.++
T Consensus 232 ~~~~l~~----~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~p---s~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~ 302 (351)
T cd03804 232 ELDRLRA----KAGPNVTFLGR-VSDEELRDLYARARAFLFP---AE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDG 302 (351)
T ss_pred hHHHHHh----hcCCCEEEecC-CCHHHHHHHHHhCCEEEEC---Cc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCC
Confidence 7766665 22368999998 9999999999999999997 66 99999999999999999999999999999999
Q ss_pred CcEEEe--CChHHHHHHHHHhc
Q 014316 407 KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 407 ~~G~l~--~~~~~la~~l~~~~ 426 (427)
.+|+++ +|++++|++|.++.
T Consensus 303 ~~G~~~~~~~~~~la~~i~~l~ 324 (351)
T cd03804 303 VTGILFEEQTVESLAAAVERFE 324 (351)
T ss_pred CCEEEeCCCCHHHHHHHHHHHH
Confidence 999999 57899999998764
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=248.85 Aligned_cols=241 Identities=16% Similarity=0.172 Sum_probs=173.1
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||+|++.. .. ...+.+..++|+|+++|.... ... ....+++ +...+.+|.+++.|...
T Consensus 83 ~~~~Dvv~~h~~~~---~~-~~~~~~~~~~~~i~~~H~~~~--------~~~--~~~~~~~-~~~~~~~d~~i~~~~~~- 146 (372)
T cd03792 83 DLDADVVVIHDPQP---LA-LPLFKKKRGRPWIWRCHIDLS--------SPN--RRVWDFL-QPYIEDYDAAVFHLPEY- 146 (372)
T ss_pred cCCCCEEEECCCCc---hh-HHHhhhcCCCeEEEEeeeecC--------CCc--HHHHHHH-HHHHHhCCEEeecHHHh-
Confidence 36899999998642 11 222233348999999997621 111 1222333 44557799999888322
Q ss_pred HHHHHhhCCeEEEecCC-CCCC-cC-CCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIKATVLYDQ-PPEF-FH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~~~vi~n~-~~~~-f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
....+..+..++||+ |... +. +...+....++.+ ++..+
T Consensus 147 --~~~~~~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~ 188 (372)
T cd03792 147 --VPPQVPPRKVIIPPSIDPLSGKNRELSPADIEYILEK------------------------------------YGIDP 188 (372)
T ss_pred --cCCCCCCceEEeCCCCCCCccccCCCCHHHHHHHHHH------------------------------------hCCCC
Confidence 222223234499999 6432 21 2222222232222 23344
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-----HH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----ES 330 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-----~~ 330 (427)
+++ +|+++||+.+.||++.|++|++.+.+. .|+++|+++|+|+.. +.
T Consensus 189 ~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~~ 240 (372)
T cd03792 189 ERP-YITQVSRFDPWKDPFGVIDAYRKVKER---------------------------VPDPQLVLVGSGATDDPEGWIV 240 (372)
T ss_pred CCc-EEEEEeccccccCcHHHHHHHHHHHhh---------------------------CCCCEEEEEeCCCCCCchhHHH
Confidence 444 899999999999999999999998775 688999999999753 23
Q ss_pred HHHHHHHcCC-CcEEEecCCC--CcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 331 YEEKIRRLRL-KRVAFRTMWL--SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 331 ~~~~~~~l~l-~~V~f~g~~~--~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
++++.+..++ ++|.|+|. . +.+++..+|++||++++| |..|+||++++||||||+|||+|+.+|..+++.++.
T Consensus 241 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~ad~~v~~---s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~ 316 (372)
T cd03792 241 YEEVLEYAEGDPDIHVLTL-PPVSDLEVNALQRASTVVLQK---SIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGE 316 (372)
T ss_pred HHHHHHHhCCCCCeEEEec-CCCCHHHHHHHHHhCeEEEeC---CCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCC
Confidence 4555555666 47999997 4 789999999999999987 788999999999999999999999999999999999
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
+|+++++.++++++|.++
T Consensus 317 ~g~~~~~~~~~a~~i~~l 334 (372)
T cd03792 317 TGFLVDTVEEAAVRILYL 334 (372)
T ss_pred ceEEeCCcHHHHHHHHHH
Confidence 999998888999888765
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-28 Score=238.94 Aligned_cols=305 Identities=19% Similarity=0.198 Sum_probs=202.4
Q ss_pred CCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 16 ~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (427)
|+.++ ....+.+|+++ ||+|++++.......... ...+........+................... ......+..
T Consensus 15 gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 90 (359)
T cd03823 15 GGAEVVAHDLAEALAKR-GHEVAVLTAGEDPPRQDK-EVIGVVVYGRPIDEVLRSALPRDLFHLSDYDN--PAVVAEFAR 90 (359)
T ss_pred cchHHHHHHHHHHHHhc-CCceEEEeCCCCCCCccc-ccccceeeccccccccCCCchhhhhHHHhccC--HHHHHHHHH
Confidence 44445 34567888875 999999997654422221 12233333321000001111111100000000 000011111
Q ss_pred HHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC
Q 014316 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
+.+..+||+||++++.... ......++..++|+++++|+..+ . ... .....+..|.++++|
T Consensus 91 -~~~~~~~dii~~~~~~~~~--~~~~~~~~~~~~~~i~~~hd~~~-~--------~~~-------~~~~~~~~d~ii~~s 151 (359)
T cd03823 91 -LLEDFRPDVVHFHHLQGLG--VSILRAARDRGIPIVLTLHDYWL-I--------CPR-------QGLFKKGGDAVIAPS 151 (359)
T ss_pred -HHHHcCCCEEEECCccchH--HHHHHHHHhcCCCEEEEEeeeee-e--------cch-------hhhhccCCCEEEEeC
Confidence 1234799999999853222 22334455668999999999832 1 000 011112349999999
Q ss_pred HHHHHHHHHhhC--CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccc
Q 014316 175 QAMQHELAQNWG--IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (427)
Q Consensus 175 ~~~~~~l~~~~~--~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
+.+++.+.+.+. .++.+++|+ +...+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~----------------------------------------------- 184 (359)
T cd03823 152 RFLLDRYVANGLFAEKISVIRNGIDLDRAKRPR----------------------------------------------- 184 (359)
T ss_pred HHHHHHHHHcCCCccceEEecCCcChhhccccc-----------------------------------------------
Confidence 999999877644 358999998 554443221
Q ss_pred ccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
...++++..++|+|++.+.||++.++++++.+.+ ++++|+++|.|+.....
T Consensus 185 ~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-----------------------------~~~~l~i~G~~~~~~~~ 235 (359)
T cd03823 185 RAPPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-----------------------------GDIELVIVGNGLELEEE 235 (359)
T ss_pred cCCCCCceEEEEEecCccccCHHHHHHHHHHHHh-----------------------------cCcEEEEEcCchhhhHH
Confidence 0012334689999999999999999999998753 47999999999866554
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 332 ~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
.... +. ++|.|+|. ++.+++.++|+.||++++| |. .|++|++++|||+||+|||+|+.++..|++.++.+|
T Consensus 236 ~~~~---~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~p---s~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g 308 (359)
T cd03823 236 SYEL---EGDPRVEFLGA-YPQEEIDDFYAEIDVLVVP---SIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNG 308 (359)
T ss_pred HHhh---cCCCeEEEeCC-CCHHHHHHHHHhCCEEEEc---CcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcE
Confidence 4333 33 58999998 8999999999999999997 65 699999999999999999999999999999999999
Q ss_pred EEe--CChHHHHHHHHHhc
Q 014316 410 LLF--SSSSELADQLLVNA 426 (427)
Q Consensus 410 ~l~--~~~~~la~~l~~~~ 426 (427)
+++ +|.++++++|.++.
T Consensus 309 ~~~~~~d~~~l~~~i~~l~ 327 (359)
T cd03823 309 LLFPPGDAEDLAAALERLI 327 (359)
T ss_pred EEECCCCHHHHHHHHHHHH
Confidence 999 55799999988763
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-28 Score=261.82 Aligned_cols=336 Identities=13% Similarity=0.069 Sum_probs=213.6
Q ss_pred HHHHhhCCCcEE----EEecCCCCC--------cccccCCCceEEEEeecCCCCC-CCCcchh-h--HHHHHHHHHHHHH
Q 014316 26 LSLARQMSLEVD----VVAYGGSKP--------HAAILEHPSIHIHTMTQWPTIP-RGLPKVL-K--PVLLLLKPLIQFF 89 (427)
Q Consensus 26 ~~La~~~g~~V~----vi~~~~~~~--------~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~~~ 89 (427)
..|+++ ||+|+ |+|-..... .+.+...++.++.++| ..+. ..++++. + .+.++-.+...
T Consensus 322 ~~l~~~-G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP--~g~~~~~l~~~i~ke~l~p~L~~f~~~-- 396 (815)
T PLN00142 322 LRIKQQ-GLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVP--FRTEKGILRKWISRFDVWPYLETFAED-- 396 (815)
T ss_pred HHHHhc-CCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecC--CCCCccccccccCHHHHHHHHHHHHHH--
Confidence 455564 99874 888432111 1233334589999999 4332 1121111 1 11111111211
Q ss_pred HHHHHHHh-hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCC---CchHHHHH--HHHHHHH
Q 014316 90 MLLWFLCV-KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR---RSHFVSIY--RWIEKYY 163 (427)
Q Consensus 90 ~~~~~~~~-~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~---~~~~~~~~--~~~e~~~ 163 (427)
+...+.. ...+||+||+|. ..+.+++.+++...|+|++.|.|.++-.-...+... ......+. ...|..+
T Consensus 397 -~~~~~~~~~~~~PDlIHaHY---wdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a 472 (815)
T PLN00142 397 -AASEILAELQGKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIA 472 (815)
T ss_pred -HHHHHHHhcCCCCCEEEECC---ccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHH
Confidence 1111111 224699999997 777788999999999999999997742111110000 01111111 2347788
Q ss_pred hccCCEEEEcCHHHHHHHH-------Hh------------hCC-----eEEEecCC-CCCCcCCCChHH-HHH-HHhhhh
Q 014316 164 GKMANGCLCVTQAMQHELA-------QN------------WGI-----KATVLYDQ-PPEFFHPTSLEE-KHE-LFCRLN 216 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~-------~~------------~~~-----~~~vi~n~-~~~~f~~~~~~~-~~~-~~~~~~ 216 (427)
...||.||+.|......+. .. -|+ ++.+|++| |...|.|..... +.. +...+
T Consensus 473 ~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I- 551 (815)
T PLN00142 473 MNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSI- 551 (815)
T ss_pred HHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccc-
Confidence 8899999999987764221 10 011 36889999 877777654321 111 00000
Q ss_pred hcccCCCCccccccCCCCCCCccchhhhcc-ccccccc--CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhcc
Q 014316 217 KILHQPLGVQDCVSNGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293 (427)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~ 293 (427)
+...|... .++.++. .++++ +|+++||+.+.||++.|++|++.+.+.
T Consensus 552 ----------------------~~~l~~~~~~~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~l------- 601 (815)
T PLN00142 552 ----------------------EELLYSPEQNDEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKRL------- 601 (815)
T ss_pred ----------------------hhhcCChHHHHHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHHh-------
Confidence 00000000 0011122 23344 899999999999999999999988764
Q ss_pred CCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC------Ch------HHHHHHHHHcCCC-cEEEecCC---CCcccHHH
Q 014316 294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP------DK------ESYEEKIRRLRLK-RVAFRTMW---LSAEDYPL 357 (427)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~------~~------~~~~~~~~~l~l~-~V~f~g~~---~~~~~~~~ 357 (427)
.++++|+|+|+|. +. ..+.++++++++. +|.|+|.. .+.+++..
T Consensus 602 --------------------~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr 661 (815)
T PLN00142 602 --------------------RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYR 661 (815)
T ss_pred --------------------CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHH
Confidence 5689999999872 11 2356788899995 79999861 22345666
Q ss_pred HHh-cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHH
Q 014316 358 LLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 358 ~l~-~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~ 424 (427)
+++ ++|++|+| |..|+||++++||||||+|||+|++||+.|+|.++.+|+++ .|++++|++|.+
T Consensus 662 ~iadaaDVfVlP---S~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~ 728 (815)
T PLN00142 662 YIADTKGAFVQP---ALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIAD 728 (815)
T ss_pred HHHhhCCEEEeC---CcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHH
Confidence 666 57999997 88899999999999999999999999999999999999999 578999999865
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-28 Score=239.00 Aligned_cols=242 Identities=22% Similarity=0.237 Sum_probs=184.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.++|++|++++..... +..++|+++++|+..+..... . ........++.+++.+.+.+|.++++|+.+++
T Consensus 84 ~~~Dii~~~~~~~~~~--------~~~~~~~i~~~hd~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 153 (365)
T cd03809 84 LGLDLLHSPHNTAPLL--------RLRGVPVVVTIHDLIPLRFPE-Y-FSPGFRRYFRRLLRRALRRADAIITVSEATKR 153 (365)
T ss_pred cCCCeeeecccccCcc--------cCCCCCEEEEeccchhhhCcc-c-CCHHHHHHHHHHHHHHHHHcCEEEEccHHHHH
Confidence 7899999998432211 567999999999984321111 1 11122456677888888999999999999999
Q ss_pred HHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 180 ELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 180 ~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
.+.+.++. ++.+++|+ +...+.+.....+.. ....
T Consensus 154 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~ 192 (365)
T cd03809 154 DLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLR-----------------------------------------ALYL 192 (365)
T ss_pred HHHHHhCcCHHHEEeeccccCccccCCCchHHHHH-----------------------------------------HhcC
Confidence 99888763 38999999 655554432111000 0112
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-HHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEK 334 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-~~~~~~ 334 (427)
.++..|+|+|++.+.||++.+++++..+.+. .++++|+++|.++.. +...+.
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~~ 245 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLERLLEAFARLPAK---------------------------GPDPKLVIVGKRGWLNEELLAR 245 (365)
T ss_pred CCCCeEEEeCCCccccCHHHHHHHHHHHHHh---------------------------cCCCCEEEecCCccccHHHHHH
Confidence 2335899999999999999999999999876 567999999986543 333444
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
+++++. ++|.|+|. ++.+++.++++.||++++| |..|++|++++|||++|+|||+++.|+..|++. ++|+++
T Consensus 246 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~p---s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~ 319 (365)
T cd03809 246 LRELGLGDRVRFLGY-VSDEELAALYRGARAFVFP---SLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFD 319 (365)
T ss_pred HHHcCCCCeEEECCC-CChhHHHHHHhhhhhhccc---chhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeC
Confidence 456676 48999997 9999999999999999987 677999999999999999999999999999984 457776
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
+|.++++++|.++
T Consensus 320 ~~~~~~~~~~i~~l 333 (365)
T cd03809 320 PLDPEALAAAIERL 333 (365)
T ss_pred CCCHHHHHHHHHHH
Confidence 6789999999875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=242.37 Aligned_cols=308 Identities=16% Similarity=0.185 Sum_probs=219.7
Q ss_pred ChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCceEEEEeecCCC-CCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 18 SPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPT-IPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 18 ~~r~~~~a~~La~~---~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
.+++..|...|++. .||.|.++|-..+....-.....|++++++|-... ....+......+..+...+.+
T Consensus 14 ~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pllr~i~lr------ 87 (426)
T KOG1111|consen 14 TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLLRPILLR------ 87 (426)
T ss_pred CCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCcccchhhhh------
Confidence 34555555555554 69999999955433222112233799999983211 001111111111112222222
Q ss_pred HHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEE
Q 014316 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLC 172 (427)
Q Consensus 94 ~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~ 172 (427)
++..+||.|++.+..+-= +.+.++..|.+.|+|=|.+ |-+ ..+ ......+-++.....|.+||
T Consensus 88 ------E~I~ivhghs~fS~lahe-~l~hartMGlktVfTdHSl-fGf--------ad~~si~~n~ll~~sL~~id~~Ic 151 (426)
T KOG1111|consen 88 ------ERIEIVHGHSPFSYLAHE-ALMHARTMGLKTVFTDHSL-FGF--------ADIGSILTNKLLPLSLANIDRIIC 151 (426)
T ss_pred ------hceEEEecCChHHHHHHH-HHHHHHhcCceEEEecccc-ccc--------cchhhhhhcceeeeeecCCCcEEE
Confidence 689999999965443322 5667888899999999987 411 111 11122334455668899999
Q ss_pred cCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 173 VTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 173 vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
||...++...-+... ++.+|||. +.+.|.|.+..
T Consensus 152 Vshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~------------------------------------------ 189 (426)
T KOG1111|consen 152 VSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD------------------------------------------ 189 (426)
T ss_pred EeecCCCceEEEeccCHhHeeeccceeeccccccCccc------------------------------------------
Confidence 999888764322222 28999999 88888775411
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
-++++...++.++|+...||+|.|++++.++.++ +|+++|+|+||||..
T Consensus 190 ----~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~---------------------------~p~vrfii~GDGPk~ 238 (426)
T KOG1111|consen 190 ----KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDK---------------------------HPEVRFIIIGDGPKR 238 (426)
T ss_pred ----cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhc---------------------------CCCeeEEEecCCccc
Confidence 1122335799999999999999999999999987 899999999999999
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 329 ~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
..+|+..+++.++ +|.++|. ++.+++.+.|.+.|+|+.| |..|.|+++++|||+||+|||+|++||++|++.++
T Consensus 239 i~lee~lEk~~l~~rV~~lG~-v~h~~Vr~vl~~G~IFlnt---SlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d- 313 (426)
T KOG1111|consen 239 IDLEEMLEKLFLQDRVVMLGT-VPHDRVRDVLVRGDIFLNT---SLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED- 313 (426)
T ss_pred chHHHHHHHhhccCceEEecc-cchHHHHHHHhcCcEEecc---HHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-
Confidence 9999999999885 8999999 9999999999999999997 88999999999999999999999999999999765
Q ss_pred cEEEe-CChHHHHHHHHHh
Q 014316 408 NGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~-~~~~~la~~l~~~ 425 (427)
.=++. .+++++++++++.
T Consensus 314 ~i~~~~~~~~dl~~~v~~a 332 (426)
T KOG1111|consen 314 MITLGEPGPDDLVGAVEKA 332 (426)
T ss_pred ceeccCCChHHHHHHHHHH
Confidence 22233 4467787777653
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-27 Score=242.43 Aligned_cols=237 Identities=19% Similarity=0.226 Sum_probs=181.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCc-EEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.++|++|++. .......+.++....+.+ +|.+.|++.. ... .....+..+.+.+.+.+|.++++|+..+
T Consensus 126 ~~~~v~~sy~--~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~--~~~------~~~~~~~~~~~~~~~~~d~ii~~S~~~~ 195 (407)
T cd04946 126 GQGTVFYSYW--LHETAYALALLKKEYLRKRVISRAHGYDL--YED------RYPSGYIPLRRYLLSSLDAVFPCSEQGR 195 (407)
T ss_pred cCceEEEEec--CchHHHHHHHHHHhcCCceEEEEeccchh--hhh------hccccchHHHHHHHhcCCEEEECCHHHH
Confidence 4567777765 223333334444444554 8999997632 110 0011123345566788999999999999
Q ss_pred HHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+.+.+.++.. +.+++|| +...+.+.. .
T Consensus 196 ~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~-------------------------------------------------~ 226 (407)
T cd04946 196 NYLQKRYPAYKEKIKVSYLGVSDPGIISKP-------------------------------------------------S 226 (407)
T ss_pred HHHHHHCCCccccEEEEECCcccccccCCC-------------------------------------------------C
Confidence 9998887653 7889998 433332110 1
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC--CEEEEEEeCCCChHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGKGPDKESYE 332 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~G~G~~~~~~~ 332 (427)
.++++.|+++|++.+.||++.+++|+..+.+. .| +++++++|+|+..+.++
T Consensus 227 ~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~~~iiG~g~~~~~l~ 279 (407)
T cd04946 227 KDDTLRIVSCSYLVPVKRVDLIIKALAALAKA---------------------------RPSIKIKWTHIGGGPLEDTLK 279 (407)
T ss_pred CCCCEEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CCCceEEEEEEeCchHHHHHH
Confidence 12346899999999999999999999999875 44 57789999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 333 ~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
+++++++.. +|.|+|. ++.+++.++|+. +|++++| |..|++|++++||||||+|||+|++||.+|++.++.+|
T Consensus 280 ~~~~~~~~~~~V~f~G~-v~~~e~~~~~~~~~~~v~v~~---S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G 355 (407)
T cd04946 280 ELAESKPENISVNFTGE-LSNSEVYKLYKENPVDVFVNL---SESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNG 355 (407)
T ss_pred HHHHhcCCCceEEEecC-CChHHHHHHHhhcCCCEEEeC---CccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcE
Confidence 999887774 7999997 999999999986 6778876 78899999999999999999999999999999999999
Q ss_pred EEeC---ChHHHHHHHHHhc
Q 014316 410 LLFS---SSSELADQLLVNA 426 (427)
Q Consensus 410 ~l~~---~~~~la~~l~~~~ 426 (427)
+++. |+++++++|.++.
T Consensus 356 ~l~~~~~~~~~la~~I~~ll 375 (407)
T cd04946 356 LLLSKDPTPNELVSSLSKFI 375 (407)
T ss_pred EEeCCCCCHHHHHHHHHHHH
Confidence 9983 5799999998764
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=241.46 Aligned_cols=239 Identities=16% Similarity=0.156 Sum_probs=170.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhhhhhcC----CCchHH----HHHHHHHHHHhccCCE
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLG----RRSHFV----SIYRWIEKYYGKMANG 169 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~~~~~~----~~~~~~----~~~~~~e~~~~~~ad~ 169 (427)
..++|+||++++.. +.++. ...++|+|++.||.....+..... ..+.+. +...++|+.+++.+|.
T Consensus 102 ~~~~D~v~~~~~~~------~~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 175 (397)
T TIGR03087 102 AEPVDAIVVFSSAM------AQYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDA 175 (397)
T ss_pred hCCCCEEEEecccc------ceeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCe
Confidence 37899999997321 22232 356899999999863222111110 011111 2345689999999999
Q ss_pred EEEcCHHHHHHHHHhhC---CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 170 CLCVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~---~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
++++|+..++.+.+.++ .++.+|||| |.+.|.+.... . .
T Consensus 176 vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~---~------------------------------~---- 218 (397)
T TIGR03087 176 ATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDY---P------------------------------N---- 218 (397)
T ss_pred EEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccc---c------------------------------C----
Confidence 99999999999876543 248899999 77777543210 0 0
Q ss_pred ccccccccCCCCCeEEEEEeecCCCCCHHHHHH----HHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE
Q 014316 246 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLE----AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 321 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~----a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 321 (427)
....+. ..++|+|++.+.||++.++. ++..+.+. .|+++|+|
T Consensus 219 ------~~~~~~-~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~---------------------------~p~~~l~i 264 (397)
T TIGR03087 219 ------PYPPGK-RVLVFTGAMDYWPNIDAVVWFAERVFPAVRAR---------------------------RPAAEFYI 264 (397)
T ss_pred ------CCCCCC-cEEEEEEecCCccCHHHHHHHHHHHHHHHHHH---------------------------CCCcEEEE
Confidence 111222 48999999999999999884 44555544 78999999
Q ss_pred EeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 322 TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
+|+|+.. .+ ++++. ++|+|+|. + +++..+|+.||++|+| |. .||+|++++||||||+|||+|+.++
T Consensus 265 vG~g~~~-~~----~~l~~~~~V~~~G~-v--~~~~~~~~~adv~v~P---s~~~eG~~~~~lEAma~G~PVV~t~~~~- 332 (397)
T TIGR03087 265 VGAKPSP-AV----RALAALPGVTVTGS-V--ADVRPYLAHAAVAVAP---LRIARGIQNKVLEAMAMAKPVVASPEAA- 332 (397)
T ss_pred ECCCChH-HH----HHhccCCCeEEeee-c--CCHHHHHHhCCEEEec---ccccCCcccHHHHHHHcCCCEEecCccc-
Confidence 9999853 23 33333 47999998 4 5899999999999997 43 5899999999999999999999754
Q ss_pred ccceecCCcEEEe-CChHHHHHHHHHhc
Q 014316 400 EELVKVDKNGLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 400 ~e~v~~~~~G~l~-~~~~~la~~l~~~~ 426 (427)
..+..++++|+++ +|++++|++|.++.
T Consensus 333 ~~i~~~~~~g~lv~~~~~~la~ai~~ll 360 (397)
T TIGR03087 333 EGIDALPGAELLVAADPADFAAAILALL 360 (397)
T ss_pred ccccccCCcceEeCCCHHHHHHHHHHHH
Confidence 2334456678888 78999999998753
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-27 Score=246.22 Aligned_cols=237 Identities=13% Similarity=0.210 Sum_probs=179.3
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCch-HHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..++||+|++.+.... ..++.....+|.++++|+-.+.... ...... +...+....+ ..+.+|++|++|+..
T Consensus 209 ~~~~di~i~dr~~~~~----~~~~~~~~~~~~v~~lH~~h~~~~~--~~~~~~~~~~~y~~~~~-~~~~~D~iI~~S~~~ 281 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG----QAVLENKGPAKLGVVVHAEHFSESA--TNETYILWNNYYEYQFS-NADYIDFFITATDIQ 281 (500)
T ss_pred CCCCCEEEEcCCcccc----hHHHhcCCCceEEEEEChhhhcCcc--CcchhHHHHHHHHHHHh-chhhCCEEEECCHHH
Confidence 3689999998854321 1233445688999999976431110 011111 1222222212 245789999999999
Q ss_pred HHHHHHhhC------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 178 QHELAQNWG------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 178 ~~~l~~~~~------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
++.+.+.++ .++.+|||| +...+.+.
T Consensus 282 ~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~----------------------------------------------- 314 (500)
T TIGR02918 282 NQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE----------------------------------------------- 314 (500)
T ss_pred HHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc-----------------------------------------------
Confidence 988876553 237899998 32222110
Q ss_pred cccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 251 ~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
...++..|+++||+.+.||++.|++|++.+.+. .|+++|.|+|+|+..+.
T Consensus 315 ---~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~---------------------------~p~~~l~i~G~G~~~~~ 364 (500)
T TIGR02918 315 ---QERKPFSIITASRLAKEKHIDWLVKAVVKAKKS---------------------------VPELTFDIYGEGGEKQK 364 (500)
T ss_pred ---cccCCeEEEEEeccccccCHHHHHHHHHHHHhh---------------------------CCCeEEEEEECchhHHH
Confidence 011235899999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCc
Q 014316 331 YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKN 408 (427)
Q Consensus 331 ~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~ 408 (427)
+++++++++++ +|.|+|. . ++.++|+.||++|+| |..|+||++++||||||+|||+|+++ |.+|+|.+|.+
T Consensus 365 l~~~i~~~~l~~~V~f~G~-~---~~~~~~~~adv~v~p---S~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~n 437 (500)
T TIGR02918 365 LQKIINENQAQDYIHLKGH-R---NLSEVYKDYELYLSA---STSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKN 437 (500)
T ss_pred HHHHHHHcCCCCeEEEcCC-C---CHHHHHHhCCEEEEc---CccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCC
Confidence 99999999985 7999995 3 688999999999997 78899999999999999999999986 89999999999
Q ss_pred EEEeC-C---------hHHHHHHHHHhc
Q 014316 409 GLLFS-S---------SSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~-~---------~~~la~~l~~~~ 426 (427)
|++++ + +++||++|..+.
T Consensus 438 G~lv~~~~~~~d~~~~~~~la~~I~~ll 465 (500)
T TIGR02918 438 GYLIPIDEEEDDEDQIITALAEKIVEYF 465 (500)
T ss_pred EEEEeCCccccchhHHHHHHHHHHHHHh
Confidence 99995 1 788999987653
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=228.86 Aligned_cols=248 Identities=17% Similarity=0.181 Sum_probs=173.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhc------------------CCC--chHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSL------------------GRR--SHFVSIYRW 158 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~------------------~~~--~~~~~~~~~ 158 (427)
.++|+||+|++...... ...+.+. +++|+|+++|+.......... ... .......++
T Consensus 50 ~~~diih~~~~~~~~~~--~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (365)
T cd03825 50 INADIVHLHWIHGGFLS--IEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRR 127 (365)
T ss_pred ccCCEEEEEccccCccC--HHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHH
Confidence 78999999984332211 1222222 599999999987321100000 000 111223333
Q ss_pred HHHHHhccCCEEEEcCHHHHHHHHHhhC---CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCC
Q 014316 159 IEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (427)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (427)
..+.+...++.++++|+..++.+.+.+. .++.++||+ +.+.|.+.......+ .
T Consensus 128 ~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~---~-------------------- 184 (365)
T cd03825 128 KRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREARK---R-------------------- 184 (365)
T ss_pred HHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHHHH---H--------------------
Confidence 3334445688999999999998877653 348999999 766665543211111 1
Q ss_pred CCCccchhhhcccccccccCCCCCeEEEEEeecCC--CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCccc
Q 014316 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 312 (427)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~--~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (427)
...+.++ .++++.|+... .||++.+++|++.+.++
T Consensus 185 ----------------~~~~~~~-~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-------------------------- 221 (365)
T cd03825 185 ----------------LGLPADK-KIILFGAVGGTDPRKGFDELIEALKRLAER-------------------------- 221 (365)
T ss_pred ----------------hCCCCCC-eEEEEEecCCCccccCHHHHHHHHHHhhhc--------------------------
Confidence 1223333 35666666654 89999999999988752
Q ss_pred CCCCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCC-cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCc
Q 014316 313 LYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLS-AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 390 (427)
Q Consensus 313 ~~~~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~-~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~P 390 (427)
..++++++++|+|+..... ++ .+|.|+|. ++ .+++.++|+.||++++| |..|++|++++|||+||+|
T Consensus 222 ~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~-~~~~~~~~~~~~~ad~~l~p---s~~e~~g~~~~Eam~~g~P 290 (365)
T cd03825 222 WKDDIELVVFGASDPEIPP-------DLPFPVHYLGS-LNDDESLALIYSAADVFVVP---SLQENFPNTAIEALACGTP 290 (365)
T ss_pred cCCCeEEEEeCCCchhhhc-------cCCCceEecCC-cCCHHHHHHHHHhCCEEEec---cccccccHHHHHHHhcCCC
Confidence 1478999999998754321 33 47999997 77 77899999999999997 7789999999999999999
Q ss_pred EEEeccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 391 VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 391 VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
||+++.|+..|++.++.+|+++ .|.++++++|.++.
T Consensus 291 vI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~ 328 (365)
T cd03825 291 VVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL 328 (365)
T ss_pred EEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999999998 47899999988753
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-26 Score=227.07 Aligned_cols=239 Identities=18% Similarity=0.280 Sum_probs=184.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.++|+++++.+..... .+.......+.++++|+........ .....+...++..... .+.+|.++++|+..++
T Consensus 98 ~~~diii~~~~~~~~~----~~~~~~~~~~~i~~~h~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~d~ii~~s~~~~~ 170 (372)
T cd04949 98 TKPDVFILDRPTLDGQ----ALLNMKKAAKVVVVLHSNHVSDNND--PVHSLINNFYEYVFEN-LDKVDGVIVATEQQKQ 170 (372)
T ss_pred CCCCEEEECCccccch----hHHhccCCceEEEEEChHHhCCccc--ccccccchhhHHHHhC-hhhCCEEEEccHHHHH
Confidence 7899999998544322 2334445667889999763211110 0011222233333222 4679999999999999
Q ss_pred HHHHhhCCe--EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
.+.+.++.. +.+|||+ +...+.+.. ....
T Consensus 171 ~l~~~~~~~~~v~~ip~g~~~~~~~~~~------------------------------------------------~~~~ 202 (372)
T cd04949 171 DLQKQFGNYNPIYTIPVGSIDPLKLPAQ------------------------------------------------FKQR 202 (372)
T ss_pred HHHHHhCCCCceEEEcccccChhhcccc------------------------------------------------hhhc
Confidence 998877654 7899998 544332211 0111
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~ 336 (427)
.+..++++||+.+.||++.+++|+..+.+. .|+++|.|+|.|+....+++.++
T Consensus 203 ~~~~i~~vgrl~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~~~ 255 (372)
T cd04949 203 KPHKIITVARLAPEKQLDQLIKAFAKVVKQ---------------------------VPDATLDIYGYGDEEEKLKELIE 255 (372)
T ss_pred CCCeEEEEEccCcccCHHHHHHHHHHHHHh---------------------------CCCcEEEEEEeCchHHHHHHHHH
Confidence 234799999999999999999999999876 78999999999998888888999
Q ss_pred HcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCcEEEeC-
Q 014316 337 RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLFS- 413 (427)
Q Consensus 337 ~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~G~l~~- 413 (427)
++++. +|.|.|. .+++.++|+.||++|+| |..|++|++++|||+||+|||+++++ |..+++.++.+|++++
T Consensus 256 ~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~~---S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~ 329 (372)
T cd04949 256 ELGLEDYVFLKGY---TRDLDEVYQKAQLSLLT---SQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPK 329 (372)
T ss_pred HcCCcceEEEcCC---CCCHHHHHhhhhEEEec---ccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCC
Confidence 98885 7999997 78999999999999997 77899999999999999999999987 8999999999999995
Q ss_pred -ChHHHHHHHHHhc
Q 014316 414 -SSSELADQLLVNA 426 (427)
Q Consensus 414 -~~~~la~~l~~~~ 426 (427)
|++++|++|..+.
T Consensus 330 ~d~~~la~~i~~ll 343 (372)
T cd04949 330 GDIEALAEAIIELL 343 (372)
T ss_pred CcHHHHHHHHHHHH
Confidence 8899999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-25 Score=219.91 Aligned_cols=188 Identities=12% Similarity=0.115 Sum_probs=148.1
Q ss_pred HhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH-hccCCEEEEcCHHHHHHHHHhh-CC--eEEEecCC-CC
Q 014316 123 SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY-GKMANGCLCVTQAMQHELAQNW-GI--KATVLYDQ-PP 197 (427)
Q Consensus 123 ~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~ad~vi~vS~~~~~~l~~~~-~~--~~~vi~n~-~~ 197 (427)
....|.|+++++|+. + .+.+.++.++ .+++|.++++|+.+++.+.+.. +. ++.+|||| |.
T Consensus 65 ~~~~~~~~v~e~~~~-~--------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~ 129 (331)
T PHA01630 65 IPHVGKNIVFEVADT-D--------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNP 129 (331)
T ss_pred ccccCCceEEEEEee-c--------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCH
Confidence 334588999999985 2 2335566677 7889999999999999987652 22 58899999 76
Q ss_pred CCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHH
Q 014316 198 EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL 277 (427)
Q Consensus 198 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li 277 (427)
+.|.+... ..+.+.+++++|++.++||++.|+
T Consensus 130 ~~f~~~~~------------------------------------------------~~~~~~vl~~~g~~~~~Kg~d~Li 161 (331)
T PHA01630 130 RMFEYKPK------------------------------------------------EKPHPCVLAILPHSWDRKGGDIVV 161 (331)
T ss_pred HHcCCCcc------------------------------------------------ccCCCEEEEEeccccccCCHHHHH
Confidence 66643310 012345777888999999999999
Q ss_pred HHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHH
Q 014316 278 EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357 (427)
Q Consensus 278 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~ 357 (427)
+|++.+.++ .++++|+++|+|+....+ .++.. +.+. ++.+++..
T Consensus 162 ~A~~~l~~~---------------------------~~~~~llivG~~~~~~~l------~~~~~--~~~~-v~~~~l~~ 205 (331)
T PHA01630 162 KIFHELQNE---------------------------GYDFYFLIKSSNMLDPRL------FGLNG--VKTP-LPDDDIYS 205 (331)
T ss_pred HHHHHHHhh---------------------------CCCEEEEEEeCcccchhh------ccccc--eecc-CCHHHHHH
Confidence 999999875 678999999977643321 12322 3454 88999999
Q ss_pred HHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 358 ~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
+|+.||++|+| |..|+||++++||||||+|||+|+.||.+|++.++.+|+++
T Consensus 206 ~y~~aDv~v~p---S~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv 257 (331)
T PHA01630 206 LFAGCDILFYP---VRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI 257 (331)
T ss_pred HHHhCCEEEEC---CccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe
Confidence 99999999997 77899999999999999999999999999999999888776
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-24 Score=211.25 Aligned_cols=302 Identities=19% Similarity=0.152 Sum_probs=193.1
Q ss_pred EeCCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 11 VLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 11 ~~~~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
..++.|+..+ ....+..|.++ ||+|+++|..... ........++++++++......... ...+..+...++...
T Consensus 5 ~~~~~gG~~~~~~~la~~l~~~-G~ev~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 79 (350)
T cd03785 5 AGGGTGGHIFPALALAEELRER-GAEVLFLGTKRGL-EARLVPKAGIPLHTIPVGGLRRKGS---LKKLKAPFKLLKGVL 79 (350)
T ss_pred EecCchhhhhHHHHHHHHHHhC-CCEEEEEECCCcc-hhhcccccCCceEEEEecCcCCCCh---HHHHHHHHHHHHHHH
Confidence 4444554444 33667788886 9999999876432 2222333478899888311111111 111111111111111
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCE
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
.+ ..+ .+..+||+||+|++.. . +.+.++++..++|++++.|+. + . ...++++++.+|.
T Consensus 80 ~~-~~~-i~~~~pDvI~~~~~~~--~-~~~~~~a~~~~~p~v~~~~~~-~--------~--------~~~~~~~~~~~~~ 137 (350)
T cd03785 80 QA-RKI-LKKFKPDVVVGFGGYV--S-GPVGLAAKLLGIPLVIHEQNA-V--------P--------GLANRLLARFADR 137 (350)
T ss_pred HH-HHH-HHhcCCCEEEECCCCc--c-hHHHHHHHHhCCCEEEEcCCC-C--------c--------cHHHHHHHHhhCE
Confidence 11 111 2347899999997432 2 335677888899998866654 2 0 1234566678999
Q ss_pred EEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 170 CLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
++++|+.++++ ..+.++.+++|+ +.+.+.+.+ .+.
T Consensus 138 vi~~s~~~~~~---~~~~~~~~i~n~v~~~~~~~~~--~~~--------------------------------------- 173 (350)
T cd03785 138 VALSFPETAKY---FPKDKAVVTGNPVREEILALDR--ERA--------------------------------------- 173 (350)
T ss_pred EEEcchhhhhc---CCCCcEEEECCCCchHHhhhhh--hHH---------------------------------------
Confidence 99999998876 123458899998 555443321 011
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEEEeCCC
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGP 326 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i~G~G~ 326 (427)
+...+++.+ ++++.|+....|+... +++|++.+.+ +++. ++++|+|
T Consensus 174 -~~~~~~~~~-~i~~~~g~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~i~G~g- 221 (350)
T cd03785 174 -RLGLRPGKP-TLLVFGGSQGARAINEAVPEALAELLR-----------------------------KRLQVIHQTGKG- 221 (350)
T ss_pred -hcCCCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhc-----------------------------cCeEEEEEcCCc-
Confidence 112333343 6666666666667654 4578877652 2455 5678988
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--------
Q 014316 327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-------- 398 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-------- 398 (427)
+.+++++.++++ .++|.|.|. .+++.++|+.||++|++ + + +++++|||++|+|||+++.++
T Consensus 222 ~~~~l~~~~~~~-~~~v~~~g~---~~~~~~~l~~ad~~v~~---s-g---~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~ 290 (350)
T cd03785 222 DLEEVKKAYEEL-GVNYEVFPF---IDDMAAAYAAADLVISR---A-G---ASTVAELAALGLPAILIPLPYAADDHQTA 290 (350)
T ss_pred cHHHHHHHHhcc-CCCeEEeeh---hhhHHHHHHhcCEEEEC---C-C---HhHHHHHHHhCCCEEEeecCCCCCCcHHH
Confidence 567788888776 468999998 48999999999999963 2 2 579999999999999987654
Q ss_pred cccceecCCcEEEeC----ChHHHHHHHHHhc
Q 014316 399 IEELVKVDKNGLLFS----SSSELADQLLVNA 426 (427)
Q Consensus 399 ~~e~v~~~~~G~l~~----~~~~la~~l~~~~ 426 (427)
..+.+.++.+|++++ |+++++++|.++.
T Consensus 291 ~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll 322 (350)
T cd03785 291 NARALVKAGAAVLIPQEELTPERLAAALLELL 322 (350)
T ss_pred hHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 246677788999994 7899999998763
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-24 Score=213.23 Aligned_cols=306 Identities=17% Similarity=0.119 Sum_probs=194.8
Q ss_pred ceEEEEEeCCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
++++++..+ .|+..+ +...+..|.++ ||+|++++...+. ........++++++++. ....... ....+....+
T Consensus 2 ~~i~i~~~g-~gG~~~~~~~la~~L~~~-g~ev~vv~~~~~~-~~~~~~~~g~~~~~~~~--~~~~~~~-~~~~l~~~~~ 75 (357)
T PRK00726 2 KKILLAGGG-TGGHVFPALALAEELKKR-GWEVLYLGTARGM-EARLVPKAGIEFHFIPS--GGLRRKG-SLANLKAPFK 75 (357)
T ss_pred cEEEEEcCc-chHhhhHHHHHHHHHHhC-CCEEEEEECCCch-hhhccccCCCcEEEEec--cCcCCCC-hHHHHHHHHH
Confidence 345554444 455444 34677778885 9999999975532 12233335899999983 1111111 1111112222
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
.+.....+ +.++ +..+||+||+|++ ...+.+.++++..++|+|++.|+. + . .+.++++
T Consensus 76 ~~~~~~~~-~~~i-k~~~pDvv~~~~~---~~~~~~~~~~~~~~~p~v~~~~~~-~--------~--------~~~~r~~ 133 (357)
T PRK00726 76 LLKGVLQA-RKIL-KRFKPDVVVGFGG---YVSGPGGLAARLLGIPLVIHEQNA-V--------P--------GLANKLL 133 (357)
T ss_pred HHHHHHHH-HHHH-HhcCCCEEEECCC---cchhHHHHHHHHcCCCEEEEcCCC-C--------c--------cHHHHHH
Confidence 22221111 1122 3478999999982 223335677788899999877764 2 0 1335666
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchh
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI 242 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (427)
++.+|.+++.++.... +..+.++++++|+ +.+.+.+.. .+.
T Consensus 134 ~~~~d~ii~~~~~~~~---~~~~~~i~vi~n~v~~~~~~~~~--~~~--------------------------------- 175 (357)
T PRK00726 134 ARFAKKVATAFPGAFP---EFFKPKAVVTGNPVREEILALAA--PPA--------------------------------- 175 (357)
T ss_pred HHHhchheECchhhhh---ccCCCCEEEECCCCChHhhcccc--hhh---------------------------------
Confidence 7789999999875532 2224459999999 544433211 000
Q ss_pred hhcccccccccCCCCCeEEEEEeecCCCCCHHHHH-HHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE
Q 014316 243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL-EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 321 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li-~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 321 (427)
+...+++. .+|+++|+..+.|++..++ +|++++.+ .+ ..+++
T Consensus 176 -------~~~~~~~~-~~i~~~gg~~~~~~~~~~l~~a~~~~~~----------------------------~~-~~~~~ 218 (357)
T PRK00726 176 -------RLAGREGK-PTLLVVGGSQGARVLNEAVPEALALLPE----------------------------AL-QVIHQ 218 (357)
T ss_pred -------hccCCCCC-eEEEEECCcHhHHHHHHHHHHHHHHhhh----------------------------Cc-EEEEE
Confidence 01222333 4778888888888876666 88887743 23 56788
Q ss_pred EeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc---
Q 014316 322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--- 398 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g--- 398 (427)
+|+|+. +++.+..+ ++++ |.|.|+ .+++.++|+.||++++. + + +++++|||++|+|+|++..++
T Consensus 219 ~G~g~~-~~~~~~~~-~~~~-v~~~g~---~~~~~~~~~~~d~~i~~---~-g---~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 219 TGKGDL-EEVRAAYA-AGIN-AEVVPF---IDDMAAAYAAADLVICR---A-G---ASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred cCCCcH-HHHHHHhh-cCCc-EEEeeh---HhhHHHHHHhCCEEEEC---C-C---HHHHHHHHHhCCCEEEecCCCCCc
Confidence 999975 44555555 7765 999998 58999999999999973 2 1 689999999999999997643
Q ss_pred -----cccceecCCcEEEe--CC--hHHHHHHHHHhc
Q 014316 399 -----IEELVKVDKNGLLF--SS--SSELADQLLVNA 426 (427)
Q Consensus 399 -----~~e~v~~~~~G~l~--~~--~~~la~~l~~~~ 426 (427)
..+.+.++.+|+++ ++ +++|+++|+++.
T Consensus 286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll 322 (357)
T PRK00726 286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL 322 (357)
T ss_pred CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH
Confidence 23567788899999 34 899999998763
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-23 Score=210.23 Aligned_cols=302 Identities=15% Similarity=0.123 Sum_probs=186.4
Q ss_pred eEEEEEeCCCCCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHH
Q 014316 6 RACVVVLGDLGRSP-RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (427)
Q Consensus 6 ~~~v~~~~~~~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
++.+ +.|+.++.- +....+..|.++ ||+|+++|..... .....+..|+++++++. ....... ....+......
T Consensus 2 ~i~~-~~g~~~g~~~~~~~La~~L~~~-g~eV~vv~~~~~~-~~~~~~~~g~~~~~i~~--~~~~~~~-~~~~l~~~~~~ 75 (348)
T TIGR01133 2 KVVL-AAGGTGGHIFPALAVAEELIKR-GVEVLWLGTKRGL-EKRLVPKAGIEFYFIPV--GGLRRKG-SFRLIKTPLKL 75 (348)
T ss_pred eEEE-EeCccHHHHhHHHHHHHHHHhC-CCEEEEEeCCCcc-hhcccccCCCceEEEec--cCcCCCC-hHHHHHHHHHH
Confidence 3444 344444333 234677888886 9999999864332 22223345899999983 2111111 11111111111
Q ss_pred HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHh
Q 014316 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (427)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (427)
+..... +.. +.+..+||+||+|++. . .+.+.++++..++|++++.++. + . .+.+++++
T Consensus 76 ~~~~~~-l~~-~i~~~~pDvVi~~~~~--~-~~~~~~~~~~~~~p~v~~~~~~-~--------~--------~~~~~~~~ 133 (348)
T TIGR01133 76 LKAVFQ-ARR-ILKKFKPDAVIGFGGY--V-SGPAGLAAKLLGIPLFHHEQNA-V--------P--------GLTNKLLS 133 (348)
T ss_pred HHHHHH-HHH-HHHhcCCCEEEEcCCc--c-cHHHHHHHHHcCCCEEEECCCC-C--------c--------cHHHHHHH
Confidence 111111 111 1234899999999732 2 2335566778899988654433 1 0 12356677
Q ss_pred ccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 165 KMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
+.+|.++++|+.+++++ +..+++|+ +...+.+.. .+.+
T Consensus 134 ~~~d~ii~~~~~~~~~~------~~~~i~n~v~~~~~~~~~--~~~~--------------------------------- 172 (348)
T TIGR01133 134 RFAKKVLISFPGAKDHF------EAVLVGNPVRQEIRSLPV--PRER--------------------------------- 172 (348)
T ss_pred HHhCeeEECchhHhhcC------CceEEcCCcCHHHhcccc--hhhh---------------------------------
Confidence 88999999999888665 23688998 433332211 0001
Q ss_pred hcccccccccCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EE
Q 014316 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-II 321 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i 321 (427)
+..+++ ..+++++|+....|++.. +++|++.+.+. ++++ ++
T Consensus 173 -------~~~~~~-~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~-----------------------------~~~~~~~ 215 (348)
T TIGR01133 173 -------FGLREG-KPTILVLGGSQGAKILNELVPKALAKLAEK-----------------------------GIQIVHQ 215 (348)
T ss_pred -------cCCCCC-CeEEEEECCchhHHHHHHHHHHHHHHHhhc-----------------------------CcEEEEE
Confidence 123333 347888888777888765 45788776542 3444 45
Q ss_pred EeCCCChHHHHHHHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--
Q 014316 322 TGKGPDKESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-- 398 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-- 398 (427)
+|+|+ .+.+++.++++++.+ +.|. . . ++.++|++||++|.+ + + |++++|||++|+|+|+++.++
T Consensus 216 ~g~~~-~~~l~~~~~~~~l~~~v~~~-~---~-~~~~~l~~ad~~v~~---~---g-~~~l~Ea~~~g~Pvv~~~~~~~~ 282 (348)
T TIGR01133 216 TGKND-LEKVKNVYQELGIEAIVTFI-D---E-NMAAAYAAADLVISR---A---G-ASTVAELAAAGVPAILIPYPYAA 282 (348)
T ss_pred CCcch-HHHHHHHHhhCCceEEecCc-c---c-CHHHHHHhCCEEEEC---C---C-hhHHHHHHHcCCCEEEeeCCCCc
Confidence 55554 477888888888754 3443 2 3 899999999999963 2 2 679999999999999998754
Q ss_pred -----cccceecCCcEEEe--CC--hHHHHHHHHHhc
Q 014316 399 -----IEELVKVDKNGLLF--SS--SSELADQLLVNA 426 (427)
Q Consensus 399 -----~~e~v~~~~~G~l~--~~--~~~la~~l~~~~ 426 (427)
..+++.++.+|+++ ++ +++|+++|+++.
T Consensus 283 ~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 283 DDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred cchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHH
Confidence 23578889999998 33 899999998764
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-23 Score=211.01 Aligned_cols=325 Identities=16% Similarity=0.099 Sum_probs=196.9
Q ss_pred ceEEEEEeCCCC-CChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecC-CCCCCCC--cchhhHHHH
Q 014316 5 GRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW-PTIPRGL--PKVLKPVLL 80 (427)
Q Consensus 5 ~~~~v~~~~~~~-~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~-~~~~~~~--~~~~~~~~~ 80 (427)
+-+.++...+++ ...|-|..+..|+++ ||.|..+...+..........+..++..-... ..+.... .........
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~-~~~vl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAER-GNRVLYVEPPGLSRTPQPRGRDWVRVVLRLRAALRRPRRLDPLIPARRRRL 83 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhC-CCeEEEEeCCCccCCCCCCCcccEEeeecccccccCccccCccccchhhhH
Confidence 334444344555 567889999999976 99999997654300111112223333221100 0000000 000111111
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 160 (427)
..+.+... +.+.......+.+++.++. +... .++..+.+.++|++++|. +.... +... .....|
T Consensus 84 ~~~~~~~~--~~~~~~~~~~~~~i~~~~~-P~~~-----~~~~~~~~~~~Vyd~~D~-~~~~~---~~~~----~~~~~e 147 (373)
T cd04950 84 LRLLLNAL--LFWAQLELGFGRPILWYYT-PYTL-----PVAALLQASLVVYDCVDD-LSAFP---GGPP----ELLEAE 147 (373)
T ss_pred HHHHHHHH--HHHHHHhcCCCCcEEEEeC-ccHH-----HHHhhcCCCeEEEEcccc-hhccC---CCCH----HHHHHH
Confidence 12222221 1111111124455555554 3222 233336788999999987 42221 1111 122778
Q ss_pred HHHhccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCcc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (427)
+.+.+.||.|+++|+.+++.+.+. +.++.+|+|| |.+.|.+.......
T Consensus 148 ~~~~~~ad~vi~~S~~l~~~~~~~-~~~i~~i~ngvd~~~f~~~~~~~~~------------------------------ 196 (373)
T cd04950 148 RRLLKRADLVFTTSPSLYEAKRRL-NPNVVLVPNGVDYEHFAAARDPPPP------------------------------ 196 (373)
T ss_pred HHHHHhCCEEEECCHHHHHHHhhC-CCCEEEcccccCHHHhhcccccCCC------------------------------
Confidence 889999999999999999887654 5669999999 76666543210000
Q ss_pred chhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE
Q 014316 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (427)
.. . ....++ ..++|+|++.++++++.+.++++. .|+++|
T Consensus 197 ---~~-----~-~~~~~~-~~i~y~G~l~~~~d~~ll~~la~~-------------------------------~p~~~~ 235 (373)
T cd04950 197 ---PA-----D-LAALPR-PVIGYYGAIAEWLDLELLEALAKA-------------------------------RPDWSF 235 (373)
T ss_pred ---hh-----H-HhcCCC-CEEEEEeccccccCHHHHHHHHHH-------------------------------CCCCEE
Confidence 00 0 011223 489999999998888766554432 678999
Q ss_pred EEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccC
Q 014316 320 IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 320 ~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~ 397 (427)
+|+|+|+..... ....+.+||+|+|. ++.++++.+++.+|++++|+..+. .+++|+|++||||||+|||+|+.+
T Consensus 236 vliG~~~~~~~~---~~~~~~~nV~~~G~-~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~ 311 (373)
T cd04950 236 VLIGPVDVSIDP---SALLRLPNVHYLGP-KPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP 311 (373)
T ss_pred EEECCCcCccCh---hHhccCCCEEEeCC-CCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH
Confidence 999998332222 22223579999997 999999999999999999865443 268999999999999999999876
Q ss_pred ccccceecCCcEEEe-CChHHHHHHHHHh
Q 014316 398 CIEELVKVDKNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 398 g~~e~v~~~~~G~l~-~~~~~la~~l~~~ 425 (427)
++.+ ....++++ +|+++++++|.+.
T Consensus 312 ~~~~---~~~~~~~~~~d~~~~~~ai~~~ 337 (373)
T cd04950 312 EVRR---YEDEVVLIADDPEEFVAAIEKA 337 (373)
T ss_pred HHHh---hcCcEEEeCCCHHHHHHHHHHH
Confidence 5543 44455555 6799999999874
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-23 Score=211.32 Aligned_cols=313 Identities=15% Similarity=0.131 Sum_probs=198.8
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhhCCCc--EEEEecCCCCCc-ccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQMSLE--VDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~~g~~--V~vi~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
..-++..+.|-.......+..|.++ +++ |.+.+...+... ......+++.++.+| .. . + ..+.+
T Consensus 52 ~iW~Ha~s~Ge~~~~~~l~~~l~~~-~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P--~d----~---~---~~~~~ 118 (425)
T PRK05749 52 LIWFHAVSVGETRAAIPLIRALRKR-YPDLPILVTTMTPTGSERAQALFGDDVEHRYLP--YD----L---P---GAVRR 118 (425)
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHh-CCCCcEEEeCCCccHHHHHHHhcCCCceEEEec--CC----c---H---HHHHH
Confidence 3334555565444455566666665 544 443332222111 111123357677777 11 1 1 13333
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
++.. .+||+++++.....+.. ...++..++|+++..|.... +.....+.+.++++.+
T Consensus 119 ~l~~------------~~Pd~v~~~~~~~~~~~---l~~~~~~~ip~vl~~~~~~~--------~s~~~~~~~~~~~r~~ 175 (425)
T PRK05749 119 FLRF------------WRPKLVIIMETELWPNL---IAELKRRGIPLVLANARLSE--------RSFKRYQKFKRFYRLL 175 (425)
T ss_pred HHHh------------hCCCEEEEEecchhHHH---HHHHHHCCCCEEEEeccCCh--------hhHHHHHHHHHHHHHH
Confidence 3433 79999999863323222 23456679998886554311 1111122345677788
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCe--EEEecCCCCCCcCCCC-hHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIK--ATVLYDQPPEFFHPTS-LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~--~~vi~n~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
++.+|.++++|+.+++.+.+. |.+ +.+++|.+.+.+.+.. .....++..+
T Consensus 176 ~~~~d~ii~~S~~~~~~l~~~-g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~-------------------------- 228 (425)
T PRK05749 176 FKNIDLVLAQSEEDAERFLAL-GAKNEVTVTGNLKFDIEVPPELAARAATLRRQ-------------------------- 228 (425)
T ss_pred HHhCCEEEECCHHHHHHHHHc-CCCCCcEecccccccCCCChhhHHHHHHHHHH--------------------------
Confidence 889999999999999998764 543 6778886433332211 1111121111
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
+. ++++ +++++|+. .|+.+.|++|++.+.+. +|+++|+
T Consensus 229 ----------~~--~~~~-vil~~~~~--~~~~~~ll~A~~~l~~~---------------------------~~~~~li 266 (425)
T PRK05749 229 ----------LA--PNRP-VWIAASTH--EGEEELVLDAHRALLKQ---------------------------FPNLLLI 266 (425)
T ss_pred ----------hc--CCCc-EEEEeCCC--chHHHHHHHHHHHHHHh---------------------------CCCcEEE
Confidence 11 2334 66777764 57899999999998775 7899999
Q ss_pred EEeCCCCh-HHHHHHHHHcCCCcEEEecCCCC-----------cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 321 ITGKGPDK-ESYEEKIRRLRLKRVAFRTMWLS-----------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 321 i~G~G~~~-~~~~~~~~~l~l~~V~f~g~~~~-----------~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
|+|+|+.+ ++++++++++|++.+.|.+...+ .+++..+|+.||+++++ +|..|++|..++||||||
T Consensus 267 ivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~--~S~~e~~g~~~lEAma~G 344 (425)
T PRK05749 267 LVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVG--GSLVKRGGHNPLEPAAFG 344 (425)
T ss_pred EcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEEC--CCcCCCCCCCHHHHHHhC
Confidence 99999986 78999999999876666664221 35899999999997764 255588999999999999
Q ss_pred CcEEEec-cCccccceecC-CcEEEe--CChHHHHHHHHHhc
Q 014316 389 LPVCAVS-YSCIEELVKVD-KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 389 ~PVIas~-~~g~~e~v~~~-~~G~l~--~~~~~la~~l~~~~ 426 (427)
+|||+++ .++..|+++.. .+|+++ +|+++||++|.++.
T Consensus 345 ~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll 386 (425)
T PRK05749 345 VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL 386 (425)
T ss_pred CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh
Confidence 9999986 46666665442 345554 88999999998763
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-22 Score=198.38 Aligned_cols=206 Identities=13% Similarity=0.177 Sum_probs=151.3
Q ss_pred CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCC
Q 014316 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTS 204 (427)
Q Consensus 127 ~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~ 204 (427)
+.+|+.|+|+. |. . +++.+++.+ .+.+|++|+.+++.+++. |.+ ..+|+|| |.+.|.+..
T Consensus 70 ~~~~~tt~~g~-~~--------~-------~~y~~~m~~-~~~vIavS~~t~~~L~~~-G~~~~i~I~~GVD~~~f~p~~ 131 (335)
T PHA01633 70 KKYFYTTCDGI-PN--------I-------EIVNKYLLQ-DVKFIPNSKFSAENLQEV-GLQVDLPVFHGINFKIVENAE 131 (335)
T ss_pred CCceEEeeCCc-Cc--------h-------HHHHHHHhc-CCEEEeCCHHHHHHHHHh-CCCCceeeeCCCChhhcCccc
Confidence 56788899988 41 1 344455555 668999999999999864 553 2347788 877776543
Q ss_pred hHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhH
Q 014316 205 LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYD 284 (427)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~ 284 (427)
. ...++.+++ ........+++++||+.++||++.|++|++.+.
T Consensus 132 ~-~~~~~r~~~------------------------------------~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~ 174 (335)
T PHA01633 132 K-LVPQLKQKL------------------------------------DKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELN 174 (335)
T ss_pred h-hhHHHHHHh------------------------------------CcCCCCCeEEEEEeCCccccCHHHHHHHHHHHH
Confidence 1 111221111 111113358999999999999999999999998
Q ss_pred HHHhhhhccCCCchhhhhhhhhcCCcccCCC----CEEEEEEeCCCChHHHHHHHHHcCCC-cEEEecC--CCCcccHHH
Q 014316 285 RRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTM--WLSAEDYPL 357 (427)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~--~~~~~~~~~ 357 (427)
++ .| +++++++|++ ..+++++. +|+|+|. +++.+++.+
T Consensus 175 ~~---------------------------~p~~~~~i~l~ivG~~--------~~~~l~l~~~V~f~g~~G~~~~~dl~~ 219 (335)
T PHA01633 175 TK---------------------------YPDIAKKIHFFVISHK--------QFTQLEVPANVHFVAEFGHNSREYIFA 219 (335)
T ss_pred Hh---------------------------CCCccccEEEEEEcHH--------HHHHcCCCCcEEEEecCCCCCHHHHHH
Confidence 75 44 4678888732 33556674 7999952 367899999
Q ss_pred HHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec------------------CCcEEEe--CChHH
Q 014316 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV------------------DKNGLLF--SSSSE 417 (427)
Q Consensus 358 ~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~------------------~~~G~l~--~~~~~ 417 (427)
+|++||++|+| |..|+||++++||||||+|||+|+.|+++|++.+ +..|+++ .|+++
T Consensus 220 ~y~~aDifV~P---S~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~ 296 (335)
T PHA01633 220 FYGAMDFTIVP---SGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIED 296 (335)
T ss_pred HHHhCCEEEEC---CccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHH
Confidence 99999999998 7789999999999999999999999999997542 2346677 47899
Q ss_pred HHHHHHHh
Q 014316 418 LADQLLVN 425 (427)
Q Consensus 418 la~~l~~~ 425 (427)
+|++|...
T Consensus 297 la~ai~~~ 304 (335)
T PHA01633 297 MANAIILA 304 (335)
T ss_pred HHHHHHHH
Confidence 99999764
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-21 Score=198.51 Aligned_cols=291 Identities=18% Similarity=0.110 Sum_probs=180.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhhhhhcCCCchH-----------------HHHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHF-----------------VSIYRWIEK 161 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-----------------~~~~~~~e~ 161 (427)
.++|++|+|. +.+...+..++ +..++|.|+|.|...+ -.....+. ..+ ..-..++|+
T Consensus 147 ~~~dViH~He---Wm~g~a~~~lK~~~~~VptVfTtHAT~~-GR~l~~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~ 221 (590)
T cd03793 147 EPAVVAHFHE---WQAGVGLPLLRKRKVDVSTIFTTHATLL-GRYLCAGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIER 221 (590)
T ss_pred CCCeEEEEcc---hhHhHHHHHHHHhCCCCCEEEEeccccc-ccccccCC-cccchhhhhcchhhhhhcccchHHHHHHH
Confidence 5799999999 66666455555 4568899999996632 00000010 111 012346899
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHH-HH-HHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEE-KH-ELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
.+...||.+++||+.++++....++.+ -.||||| +.+.|.+..... .+ .-..++.
T Consensus 222 ~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~ViPNGid~~~f~~~~e~~~~~~~~k~ki~--------------------- 280 (590)
T cd03793 222 AAAHCAHVFTTVSEITAYEAEHLLKRKPDVVLPNGLNVKKFSALHEFQNLHAQSKEKIN--------------------- 280 (590)
T ss_pred HHHhhCCEEEECChHHHHHHHHHhCCCCCEEeCCCcchhhcccchhhhhhhHHhhhhhh---------------------
Confidence 999999999999999999999988887 3499999 888886653211 11 1111111
Q ss_pred ccchhh-hcccccccccCCCCCeEEEE-EeecCC-CCCHHHHHHHHHhhHHHHhhhhc---------cCCCch-------
Q 014316 238 ADETIF-TSLAGIDVFLKPNRPALVVS-STSWTP-DEDFGILLEAALMYDRRVAAILN---------EDDSTN------- 298 (427)
Q Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~i~~-~g~~~~-~K~~~~Li~a~~~l~~~~~~~~~---------~~~~~~------- 298 (427)
.| .+..+..+.+.++++ +++| +||++. +||++.+|+|++.+.+....... --+.+|
T Consensus 281 ----~f~~~~~~~~~~~~~d~t-li~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l 355 (590)
T cd03793 281 ----EFVRGHFYGHYDFDLDKT-LYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESL 355 (590)
T ss_pred ----HHHHHHHhhhcCCCCCCe-EEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhh
Confidence 11 001122334455565 4445 899998 99999999999999886433211 001111
Q ss_pred --hhhh--------------hhh---------hcCCcc-------------------cCCCCEEEEEEeCCCChHHHHHH
Q 014316 299 --EEVF--------------LKE---------ISDGKQ-------------------YLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 299 --~~~~--------------~~~---------~~~~~~-------------------~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
|++. -+. +++..+ ...|.+.-.-.-+ ...+.+-..
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~-~~~D~il~~ 434 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVD-DANDPILNH 434 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCc-CccCHHHHH
Confidence 1100 000 111000 0111111111111 223455566
Q ss_pred HHHcCCC-------cEEEecCCCCcc------cHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--
Q 014316 335 IRRLRLK-------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-- 399 (427)
Q Consensus 335 ~~~l~l~-------~V~f~g~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~-- 399 (427)
++++++- .|.|...+++.. +..+++++||++|+| |.+|+||++++||||||+|||+|+.+|.
T Consensus 435 ~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~P---S~yE~fG~~~lEAma~G~PvI~t~~~gf~~ 511 (590)
T cd03793 435 IRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFP---SYYEPWGYTPAECTVMGIPSITTNLSGFGC 511 (590)
T ss_pred HHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEec---cccCCCCcHHHHHHHcCCCEEEccCcchhh
Confidence 7777662 288888767633 588999999999998 8899999999999999999999999988
Q ss_pred --ccceecC-CcEEEeC---------ChHHHHHHHHHh
Q 014316 400 --EELVKVD-KNGLLFS---------SSSELADQLLVN 425 (427)
Q Consensus 400 --~e~v~~~-~~G~l~~---------~~~~la~~l~~~ 425 (427)
.|++.++ ..|+++. +.++|+++|.++
T Consensus 512 ~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~ 549 (590)
T cd03793 512 FMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEF 549 (590)
T ss_pred hhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHH
Confidence 5666554 3577763 246777777664
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.8e-21 Score=190.60 Aligned_cols=222 Identities=14% Similarity=0.125 Sum_probs=155.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
.+-|+||+++|+.....+...++.++ .++|+|+++||+ ++... .... ...+.++.+++.||.++|+|+.+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~-~~~~~---~~~~----~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDI-EPLRF---DSNY----YLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCc-HHHhc---cccc----hhhHHHHHHHHhCCEEEECCHHH
Confidence 34499999998765422223333322 379999999998 43311 1111 12466788889999999999999
Q ss_pred HHHHHHhhCC---eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 178 QHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 178 ~~~l~~~~~~---~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
++++.+. |. ++.++++.+.... .. .+ ...
T Consensus 135 ~~~l~~~-g~~~~~i~~~~~~~~~~~--~~--~~-------------------------------------------~~~ 166 (333)
T PRK09814 135 KDRLVEE-GLTTDKIIVQGIFDYLND--IE--LV-------------------------------------------KTP 166 (333)
T ss_pred HHHHHHc-CCCcCceEeccccccccc--cc--cc-------------------------------------------ccc
Confidence 9999764 54 2555555431100 00 00 001
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
. ....|+|+|++...+++ .+. .++++|.++|+|+..+
T Consensus 167 ~-~~~~i~yaG~l~k~~~l----------~~~---------------------------~~~~~l~i~G~g~~~~----- 203 (333)
T PRK09814 167 S-FQKKINFAGNLEKSPFL----------KNW---------------------------SQGIKLTVFGPNPEDL----- 203 (333)
T ss_pred c-CCceEEEecChhhchHH----------Hhc---------------------------CCCCeEEEECCCcccc-----
Confidence 1 22489999999843221 111 4578999999998644
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccC----C--C--CCCCchHHHHHHcCCCcEEEeccCccccceecC
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS----S--S--GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 406 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~----s--~--~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~ 406 (427)
...++|+|+|. ++.++++.+|+. |+++++... + . ...+|.|+.||||||+|||+++.++..|+|+++
T Consensus 204 ---~~~~~V~f~G~-~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~ 278 (333)
T PRK09814 204 ---ENSANISYKGW-FDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVEN 278 (333)
T ss_pred ---ccCCCeEEecC-CCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhC
Confidence 12358999996 999999999998 777764322 1 1 257899999999999999999999999999999
Q ss_pred CcEEEeCChHHHHHHHHHh
Q 014316 407 KNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 407 ~~G~l~~~~~~la~~l~~~ 425 (427)
.+|+++++.++++++|.++
T Consensus 279 ~~G~~v~~~~el~~~l~~~ 297 (333)
T PRK09814 279 GLGFVVDSLEELPEIIDNI 297 (333)
T ss_pred CceEEeCCHHHHHHHHHhc
Confidence 9999999989999988754
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-19 Score=167.67 Aligned_cols=120 Identities=33% Similarity=0.435 Sum_probs=105.7
Q ss_pred EEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCC-C
Q 014316 263 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-K 341 (427)
Q Consensus 263 ~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l-~ 341 (427)
|+|++.+.||++.+++|+..+.+. .++++++++|.++.....++.+.+++. +
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~---------------------------~~~~~~~i~G~~~~~~~~~~~~~~~~~~~ 161 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKER---------------------------GPDLKLVIAGDGPEREYLEELLAALLLLD 161 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCCChHHHHHHHHhcCCcc
Confidence 999999999999999999999876 689999999999887777766677666 5
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
+|.+.|...+.+++..++++||++++| +..|++|++++|||++|+|+|+|+.++..|++.++++|+++
T Consensus 162 ~v~~~~~~~~~~~~~~~~~~~di~l~~---~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 162 RVIFLGGLDPEELLALLLAAADVFVLP---SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred cEEEeCCCCcHHHHHHHhhcCCEEEec---ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 899999722566777777779999997 77789999999999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=168.88 Aligned_cols=142 Identities=24% Similarity=0.414 Sum_probs=125.1
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.+++..|+++|++.+.||++.+++|+..+.++ ..+++.++|+|+++....+...
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~~~~~~~~~~~ 65 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK--------------------------KNPNYKLVIVGDGEYKKELKNL 65 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHH--------------------------HHTTEEEEEESHCCHHHHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhh--------------------------cCCCeEEEEEcccccccccccc
Confidence 34567999999999999999999999999763 1578999999999888889999
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
++.+++. ++.|.|. ++.+++.++|+.||++++| |..|++|.+++|||+||+|||+++.|+..|++.++.+|+++
T Consensus 66 ~~~~~~~~~i~~~~~-~~~~~l~~~~~~~di~v~~---s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~ 141 (172)
T PF00534_consen 66 IEKLNLKENIIFLGY-VPDDELDELYKSSDIFVSP---SRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFD 141 (172)
T ss_dssp HHHTTCGTTEEEEES-HSHHHHHHHHHHTSEEEE----BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEES
T ss_pred ccccccccccccccc-ccccccccccccceecccc---ccccccccccccccccccceeeccccCCceeeccccceEEeC
Confidence 9999984 8999998 7788999999999999997 66799999999999999999999999999999999999999
Q ss_pred -CChHHHHHHHHHhc
Q 014316 413 -SSSSELADQLLVNA 426 (427)
Q Consensus 413 -~~~~~la~~l~~~~ 426 (427)
.++++++++|.++.
T Consensus 142 ~~~~~~l~~~i~~~l 156 (172)
T PF00534_consen 142 PNDIEELADAIEKLL 156 (172)
T ss_dssp TTSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 45699999998763
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.1e-20 Score=189.57 Aligned_cols=245 Identities=14% Similarity=0.081 Sum_probs=161.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhh-hhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLS-LSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
...|+|++|.+ ..+.+..++.. ..+.|+.+.+|-. |+-.. +..-.. .+.+-+.+. .+|.+.+-+...
T Consensus 130 ~~~d~iwihDy---hl~llp~~lr~~~~~~~i~~f~Hip-fP~~e~~~~lp~------~~~ll~~~l-~~D~igF~t~~~ 198 (460)
T cd03788 130 RPGDLVWVHDY---HLLLLPQMLRERGPDARIGFFLHIP-FPSSEIFRCLPW------REELLRGLL-GADLIGFQTERY 198 (460)
T ss_pred CCCCEEEEeCh---hhhHHHHHHHhhCCCCeEEEEEeCC-CCChHHHhhCCC------hHHHHHHHh-cCCEEEECCHHH
Confidence 46899999994 34444445543 3467888889855 31110 000000 012222222 388888888665
Q ss_pred HHHHHHh-----------------hCC--eEEEecCC-CCCCcCCCC--hHHHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 178 QHELAQN-----------------WGI--KATVLYDQ-PPEFFHPTS--LEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 178 ~~~l~~~-----------------~~~--~~~vi~n~-~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
.+.+.+. .|. ++.++||| |.+.|.+.. .+.+..+. ++
T Consensus 199 ~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~-~~-------------------- 257 (460)
T cd03788 199 ARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAA-EL-------------------- 257 (460)
T ss_pred HHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHH-HH--------------------
Confidence 5444332 122 27889999 877775432 11111110 00
Q ss_pred CCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC
Q 014316 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 315 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (427)
....+++ .+|+++||+.+.||++.+++|++.+.++ +|
T Consensus 258 ---------------~~~~~~~-~~il~vgRl~~~Kgi~~ll~A~~~ll~~---------------------------~p 294 (460)
T cd03788 258 ---------------RERLGGR-KLIVGVDRLDYSKGIPERLLAFERLLER---------------------------YP 294 (460)
T ss_pred ---------------HHhcCCC-EEEEEecCccccCCHHHHHHHHHHHHHh---------------------------Ch
Confidence 0112333 4899999999999999999999998876 55
Q ss_pred C----EEEEEEeCC-----CChHHHHHHHH----HcC-------CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCC
Q 014316 316 R----LLFIITGKG-----PDKESYEEKIR----RLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL 375 (427)
Q Consensus 316 ~----~~l~i~G~G-----~~~~~~~~~~~----~l~-------l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e 375 (427)
+ ++|+++|.+ +..+++++.++ +++ ...|.|.+..++.+++.++|+.||++|+| |..|
T Consensus 295 ~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~p---S~~E 371 (460)
T cd03788 295 EWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVT---PLRD 371 (460)
T ss_pred hhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeC---cccc
Confidence 4 678888643 33334444333 332 23566665448999999999999999997 8889
Q ss_pred CCchHHHHHHcCCCc----EEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 376 DLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 376 ~~p~~~lEama~G~P----VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+||++++||||||+| ||+|+.+|..+. +.+|+++ .|++++|++|.++
T Consensus 372 g~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~ 424 (460)
T cd03788 372 GMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRA 424 (460)
T ss_pred ccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHH
Confidence 999999999999999 999998888776 5689999 5789999999875
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-19 Score=180.05 Aligned_cols=225 Identities=12% Similarity=0.071 Sum_probs=150.0
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||++.|.. ... ....+...++|++..++++.. . .+++.+.+|.++++|+.++
T Consensus 102 ~~~pD~Vi~~~~~~--~~~-~~~~~~~~~ip~~~~~td~~~-------~------------~~~~~~~ad~i~~~s~~~~ 159 (380)
T PRK13609 102 AEKPDIVINTFPII--AVP-ELKKQTGISIPTYNVLTDFCL-------H------------KIWVHREVDRYFVATDHVK 159 (380)
T ss_pred HhCcCEEEEcChHH--HHH-HHHHhcCCCCCeEEEeCCCCC-------C------------cccccCCCCEEEECCHHHH
Confidence 47999999986422 222 222233457897755555421 0 1234678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.++.+.-.+.|.+... +..++. ++++++
T Consensus 160 ~~l~~~-gi~~~ki~v~G~p~~~~f~~~~~--~~~~~~------------------------------------~~~l~~ 200 (380)
T PRK13609 160 KVLVDI-GVPPEQVVETGIPIRSSFELKIN--PDIIYN------------------------------------KYQLCP 200 (380)
T ss_pred HHHHHc-CCChhHEEEECcccChHHcCcCC--HHHHHH------------------------------------HcCCCC
Confidence 998764 553 55654432122322111 111111 224555
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CC-CChHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KG-PDKESYEE 333 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G-~~~~~~~~ 333 (427)
+++.++++.|++...|++..+++++.. .++++++++| .+ +..+.+++
T Consensus 201 ~~~~il~~~G~~~~~k~~~~li~~l~~-------------------------------~~~~~~viv~G~~~~~~~~l~~ 249 (380)
T PRK13609 201 NKKILLIMAGAHGVLGNVKELCQSLMS-------------------------------VPDLQVVVVCGKNEALKQSLED 249 (380)
T ss_pred CCcEEEEEcCCCCCCcCHHHHHHHHhh-------------------------------CCCcEEEEEeCCCHHHHHHHHH
Confidence 666677888999999999999988753 3578887764 33 34567777
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccc----cceecCCc
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIE----ELVKVDKN 408 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~----e~v~~~~~ 408 (427)
++++++ ++|+|+|+ .+++.++|+.||+++. ++.|++++|||+||+|||+++ .+|.. +.+.+...
T Consensus 250 ~~~~~~-~~v~~~g~---~~~~~~l~~~aD~~v~-------~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~ 318 (380)
T PRK13609 250 LQETNP-DALKVFGY---VENIDELFRVTSCMIT-------KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGA 318 (380)
T ss_pred HHhcCC-CcEEEEec---hhhHHHHHHhccEEEe-------CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCc
Confidence 777665 68999998 5789999999999884 124779999999999999986 56532 24444445
Q ss_pred EEEeCChHHHHHHHHHhc
Q 014316 409 GLLFSSSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~~~~~la~~l~~~~ 426 (427)
|+...++++++++|.++.
T Consensus 319 ~~~~~~~~~l~~~i~~ll 336 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALL 336 (380)
T ss_pred EEEECCHHHHHHHHHHHH
Confidence 665689999999988763
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-18 Score=178.24 Aligned_cols=245 Identities=11% Similarity=0.096 Sum_probs=166.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHH--HHHHHHHHHhccCCEEEEcCHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~ad~vi~vS~~ 176 (427)
..-|+|.+|+ +...++..++... ...++.+.+|-. |+. ...|.. ..+.+-+-+ -.||.|-+-|..
T Consensus 126 ~~~d~vwvhD---Yhl~l~p~~lr~~~~~~~igfFlHip-fP~-------~e~f~~lp~r~~il~gl-l~~dligF~t~~ 193 (456)
T TIGR02400 126 QPGDIVWVHD---YHLMLLPAMLRELGVQNKIGFFLHIP-FPS-------SEIYRTLPWRRELLEGL-LAYDLVGFQTYD 193 (456)
T ss_pred CCCCEEEEec---chhhHHHHHHHhhCCCCeEEEEEeCC-CCC-------hHHHhhCCcHHHHHHHH-hcCCEEEECCHH
Confidence 4568999999 5555656666554 355777788855 311 111111 011122222 258999999988
Q ss_pred HHHHHHHh----hC------------Ce--EEEecCC-CCCCcCCCChH-HHHHHHhhhhhcccCCCCccccccCCCCCC
Q 014316 177 MQHELAQN----WG------------IK--ATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (427)
Q Consensus 177 ~~~~l~~~----~~------------~~--~~vi~n~-~~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
..+.+.+. ++ .. +.++||| |.+.|.+.... ...+....
T Consensus 194 ~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~---------------------- 251 (456)
T TIGR02400 194 DARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAE---------------------- 251 (456)
T ss_pred HHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHH----------------------
Confidence 88776542 11 22 7789999 88777543211 00000000
Q ss_pred CccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC
Q 014316 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
++.+ + .++ .+|+++||+.+.||++.+++|++.+.++ +|+
T Consensus 252 ----------lr~~--~-~~~-~vIl~VgRLd~~KGi~~ll~A~~~ll~~---------------------------~p~ 290 (456)
T TIGR02400 252 ----------LRES--L-KGR-KLIIGVDRLDYSKGLPERLLAFERFLEE---------------------------HPE 290 (456)
T ss_pred ----------HHHH--c-CCC-eEEEEccccccccCHHHHHHHHHHHHHh---------------------------Ccc
Confidence 1111 1 223 4899999999999999999999998776 564
Q ss_pred ----EEEEEEe-----CCCChHHHHHHHHHc--------C-CC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC
Q 014316 317 ----LLFIITG-----KGPDKESYEEKIRRL--------R-LK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD 376 (427)
Q Consensus 317 ----~~l~i~G-----~G~~~~~~~~~~~~l--------~-l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~ 376 (427)
+.|+++| +|+..+++++.++++ + +. .+.+++..++.+++.++|++||++|+| |..||
T Consensus 291 ~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~---S~~EG 367 (456)
T TIGR02400 291 WRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVT---PLRDG 367 (456)
T ss_pred ccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEEC---ccccc
Confidence 5677764 556666666666654 1 11 255555448999999999999999997 88899
Q ss_pred CchHHHHHHcCCCc----EEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 377 LPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 377 ~p~~~lEama~G~P----VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+|++++||||||+| +|+|+.+|..+.+. +|+++ .|++++|++|.++
T Consensus 368 ~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 368 MNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred cCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHH
Confidence 99999999999999 99999888888773 79999 6789999999764
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=173.76 Aligned_cols=236 Identities=16% Similarity=0.057 Sum_probs=161.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|... ...+.+.++++..++|+++..|+. .+ ........ +..+.+.+.+|.++++|+..++
T Consensus 87 ~~pDvV~~~g~~--~~~~~~~~aa~~~~iPvv~~~~g~-~s-----~~~~~~~~----~~r~~~~~~ad~~~~~s~~~~~ 154 (363)
T cd03786 87 EKPDLVLVLGDT--NETLAAALAAFKLGIPVAHVEAGL-RS-----FDRGMPDE----ENRHAIDKLSDLHFAPTEEARR 154 (363)
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHcCCCEEEEeccc-cc-----CCCCCCch----HHHHHHHHHhhhccCCCHHHHH
Confidence 699999999732 233446677888899988766653 11 00111111 1222355788999999999999
Q ss_pred HHHHhhCCe---EEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 180 ELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
++.+. |.+ +.+++|+ |...+.+.. ...+. .++....
T Consensus 155 ~l~~~-G~~~~kI~vign~v~d~~~~~~~~--~~~~~-----------------------------------~~~~~~~- 195 (363)
T cd03786 155 NLLQE-GEPPERIFVVGNTMIDALLRLLEL--AKKEL-----------------------------------ILELLGL- 195 (363)
T ss_pred HHHHc-CCCcccEEEECchHHHHHHHHHHh--hccch-----------------------------------hhhhccc-
Confidence 98764 554 7778887 221111000 00000 0011123
Q ss_pred CCCCeEEEEEeecCC---CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 255 PNRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~---~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
++++.++++.|+... .|+++.+++|++.+.+ . ++.+++.|+++..+.+
T Consensus 196 ~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~----------------------------~-~~~vi~~~~~~~~~~l 246 (363)
T cd03786 196 LPKKYILVTLHRVENVDDGEQLEEILEALAELAE----------------------------E-DVPVVFPNHPRTRPRI 246 (363)
T ss_pred CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh----------------------------c-CCEEEEECCCChHHHH
Confidence 334557788888775 7999999999998753 1 5788888888888899
Q ss_pred HHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCc
Q 014316 332 EEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKN 408 (427)
Q Consensus 332 ~~~~~~l~l--~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~ 408 (427)
++.++++++ ++|.|+|. ...+++..+|+.||++|.+ |. + .+.|||++|+|||+++ .++.++.+++|.
T Consensus 247 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~l~~~ad~~v~~---Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~- 316 (363)
T cd03786 247 REAGLEFLGHHPNVLLISP-LGYLYFLLLLKNADLVLTD---SG----G-IQEEASFLGVPVLNLRDRTERPETVESGT- 316 (363)
T ss_pred HHHHHhhccCCCCEEEECC-cCHHHHHHHHHcCcEEEEc---Cc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-
Confidence 999888875 58999997 7789999999999999985 32 2 5789999999999997 455667775543
Q ss_pred EEEe-CChHHHHHHHHHh
Q 014316 409 GLLF-SSSSELADQLLVN 425 (427)
Q Consensus 409 G~l~-~~~~~la~~l~~~ 425 (427)
++++ ++.++++++|.++
T Consensus 317 ~~~~~~~~~~i~~~i~~l 334 (363)
T cd03786 317 NVLVGTDPEAILAAIEKL 334 (363)
T ss_pred EEecCCCHHHHHHHHHHH
Confidence 3444 4689999998775
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.2e-18 Score=172.37 Aligned_cols=233 Identities=17% Similarity=0.195 Sum_probs=152.9
Q ss_pred hhCCCcEEEEcCCCCh--hHHHHHHHHH--hhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 98 KIASPDVFLVQNPPSV--PTLVAVKWAS--SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~--~~~~~~~~~~--~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
+..+||+||++.|... +..+ +.... ...++|++..++|+ +.. . ..++.+.+|.++++
T Consensus 97 ~~~~pDvIi~thp~~~~~~~~~-l~~~~~~~~~~~p~~~~~tD~-~~~--------~---------~~w~~~~~d~~~~~ 157 (382)
T PLN02605 97 MKYKPDIIVSVHPLMQHVPLRV-LRWQGKELGKKIPFTTVVTDL-GTC--------H---------PTWFHKGVTRCFCP 157 (382)
T ss_pred HhcCcCEEEEeCcCcccCHHHH-HHHHhhccCCCCCEEEEECCC-CCc--------C---------cccccCCCCEEEEC
Confidence 3479999999764322 2212 11111 12478988888777 210 0 12445789999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 174 TQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 174 S~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
|+.+++.+.+. |.+ +.++.++ +.+++.+.. .+.+++.
T Consensus 158 s~~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~--~~~~~r~------------------------------------ 198 (382)
T PLN02605 158 SEEVAKRALKR-GLEPSQIRVYGLPIRPSFARAVR--PKDELRR------------------------------------ 198 (382)
T ss_pred CHHHHHHHHHc-CCCHHHEEEECcccCHhhccCCC--CHHHHHH------------------------------------
Confidence 99999988765 554 7777666 333332221 1222222
Q ss_pred ccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEEEeCCCCh
Q 014316 250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDK 328 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i~G~G~~~ 328 (427)
+++++++++ +|+++|+....|++..+++++..+.... ....++.+ ++++|+|+
T Consensus 199 ~~gl~~~~~-~il~~Gg~~g~~~~~~li~~l~~~~~~~-----------------------~~~~~~~~~~vi~G~~~-- 252 (382)
T PLN02605 199 ELGMDEDLP-AVLLMGGGEGMGPLEETARALGDSLYDK-----------------------NLGKPIGQVVVICGRNK-- 252 (382)
T ss_pred HcCCCCCCc-EEEEECCCcccccHHHHHHHHHHhhccc-----------------------cccCCCceEEEEECCCH--
Confidence 235555555 8889999999999999999987643100 00024454 67888774
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc------Ccccc
Q 014316 329 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY------SCIEE 401 (427)
Q Consensus 329 ~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~------~g~~e 401 (427)
.+++..++... .+|+|+|+ .++++++|++||++|.+ + -|++++||||||+|+|+++. |+. +
T Consensus 253 -~~~~~L~~~~~~~~v~~~G~---~~~~~~l~~aaDv~V~~---~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~ 320 (382)
T PLN02605 253 -KLQSKLESRDWKIPVKVRGF---VTNMEEWMGACDCIITK---A----GPGTIAEALIRGLPIILNGYIPGQEEGNV-P 320 (382)
T ss_pred -HHHHHHHhhcccCCeEEEec---cccHHHHHHhCCEEEEC---C----CcchHHHHHHcCCCEEEecCCCccchhhH-H
Confidence 22222232222 36999998 57999999999999973 2 36799999999999999983 444 3
Q ss_pred ceecCCcEEEeCChHHHHHHHHHhc
Q 014316 402 LVKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 402 ~v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
.+.+++.|++++++++++++|.++.
T Consensus 321 ~i~~~g~g~~~~~~~~la~~i~~ll 345 (382)
T PLN02605 321 YVVDNGFGAFSESPKEIARIVAEWF 345 (382)
T ss_pred HHHhCCceeecCCHHHHHHHHHHHH
Confidence 4456777888899999999998763
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-17 Score=168.28 Aligned_cols=267 Identities=16% Similarity=0.089 Sum_probs=182.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh----hcCCcEEEEecccchhhhhh--hcCC-CchHHHHHH----------HHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS----LRRSAFIVDWHNFGYTLLSL--SLGR-RSHFVSIYR----------WIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~----~~~~p~i~~~h~~~~~~~~~--~~~~-~~~~~~~~~----------~~e~~ 162 (427)
..|||||+|+ ..+.++..+++. ...+|.|+|+|++.|.-... .... .-++ ..+. .++|.
T Consensus 129 ~~pDIvH~hD---Wqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~-~~~~~~~l~~~~~~~~lK~ 204 (487)
T COG0297 129 WLPDIVHAHD---WQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF-EAYASFGLEFYGQISFLKG 204 (487)
T ss_pred CCCCEEEeec---HHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH-HHhhhceeeecCcchhhhh
Confidence 4799999999 777776667766 55889999999987622110 0000 0000 0111 34455
Q ss_pred HhccCCEEEEcCHHHHHHHH-HhhC-----------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccc
Q 014316 163 YGKMANGCLCVTQAMQHELA-QNWG-----------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 229 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~-~~~~-----------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (427)
....||.|.+||....+++. ..+| .+..-|.|| |.+.+.|-........|..
T Consensus 205 gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~--------------- 269 (487)
T COG0297 205 GLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSA--------------- 269 (487)
T ss_pred hheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCc---------------
Confidence 55689999999999988876 2222 126778888 7666655432111000000
Q ss_pred cCCCCCCCccchhhhcccccccccCCC-CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcC
Q 014316 230 SNGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 308 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (427)
+...++..+... +...++++.+ ...++.++||+..+||++.+++++..+.+.
T Consensus 270 ----~~~~~k~~nk~~-L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~---------------------- 322 (487)
T COG0297 270 ----EVLPAKAENKVA-LQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQ---------------------- 322 (487)
T ss_pred ----cchhhhHHHHHH-HHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHh----------------------
Confidence 000001111111 3334455533 224999999999999999999999999876
Q ss_pred CcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHc
Q 014316 309 GKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG 386 (427)
Q Consensus 309 ~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama 386 (427)
.+++++.|.|+ .++.+..+++++.. ++.+.. |.+..-...+++.+|++++| |..|+||++-++||.
T Consensus 323 -------~~~~vilG~gd~~le~~~~~la~~~~~-~~~~~i-~~~~~la~~i~agaD~~lmP---SrfEPcGL~ql~amr 390 (487)
T COG0297 323 -------GWQLVLLGTGDPELEEALRALASRHPG-RVLVVI-GYDEPLAHLIYAGADVILMP---SRFEPCGLTQLYAMR 390 (487)
T ss_pred -------CceEEEEecCcHHHHHHHHHHHHhcCc-eEEEEe-eecHHHHHHHHhcCCEEEeC---CcCcCCcHHHHHHHH
Confidence 49999999992 12344455555432 344433 47888899999999999998 999999999999999
Q ss_pred CCCcEEEeccCccccceec--------CCcEEEe--CChHHHHHHHHH
Q 014316 387 CGLPVCAVSYSCIEELVKV--------DKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 387 ~G~PVIas~~~g~~e~v~~--------~~~G~l~--~~~~~la~~l~~ 424 (427)
.|++.|+..+||.+|.|.+ ..+|+++ .++++++.+|.+
T Consensus 391 yGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~r 438 (487)
T COG0297 391 YGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRR 438 (487)
T ss_pred cCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHH
Confidence 9999999999999999975 5789999 567999999875
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-17 Score=166.38 Aligned_cols=239 Identities=15% Similarity=0.085 Sum_probs=155.1
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..+||+||+|+.+ ...+.+.++++..++|++...++. .+ .+...++ ... ..+.+.+.+|.++++|+..
T Consensus 84 ~~~pDiv~~~gd~--~~~la~a~aa~~~~ipv~h~~~g~-~s-----~~~~~~~~~~~---~r~~~~~~ad~~~~~s~~~ 152 (365)
T TIGR00236 84 EEKPDIVLVQGDT--TTTLAGALAAFYLQIPVGHVEAGL-RT-----GDRYSPMPEEI---NRQLTGHIADLHFAPTEQA 152 (365)
T ss_pred HcCCCEEEEeCCc--hHHHHHHHHHHHhCCCEEEEeCCC-Cc-----CCCCCCCccHH---HHHHHHHHHHhccCCCHHH
Confidence 3889999999743 334447788888999986543332 10 0111111 111 1123345689999999999
Q ss_pred HHHHHHhhCCe---EEEecCCC-CCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 178 QHELAQNWGIK---ATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 178 ~~~l~~~~~~~---~~vi~n~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
++.+.+. |.+ +.+++|+- ...+.+.......+++ +++.
T Consensus 153 ~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~------------------------------------~~~~- 194 (365)
T TIGR00236 153 KDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVL------------------------------------SEFG- 194 (365)
T ss_pred HHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHH------------------------------------HhcC-
Confidence 9999775 554 78889882 1111111000001111 1111
Q ss_pred CCCCCeEEEEEeec-CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 254 KPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 254 ~~~~~~~i~~~g~~-~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
.+++.+++..+|. ...|+++.+++|+.++.+. .|+++++++|.+.. +..+
T Consensus 195 -~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~~vi~~~~~~-~~~~ 245 (365)
T TIGR00236 195 -EDKRYILLTLHRRENVGEPLENIFKAIREIVEE---------------------------FEDVQIVYPVHLNP-VVRE 245 (365)
T ss_pred -CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHH---------------------------CCCCEEEEECCCCh-HHHH
Confidence 2234334433343 3458999999999998765 67888888865432 2222
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccceecCCcEE
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGL 410 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v~~~~~G~ 410 (427)
++.+.++. ++|.|++. ++..++..+++.+|+++.+ | |..++|||+||+|||++ ++|+..|++.++ .++
T Consensus 246 ~~~~~~~~~~~v~~~~~-~~~~~~~~~l~~ad~vv~~---S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~ 315 (365)
T TIGR00236 246 PLHKHLGDSKRVHLIEP-LEYLDFLNLAANSHLILTD---S-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNK 315 (365)
T ss_pred HHHHHhCCCCCEEEECC-CChHHHHHHHHhCCEEEEC---C-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceE
Confidence 34444555 48999998 8888999999999999864 3 44689999999999997 678888888755 555
Q ss_pred Ee-CChHHHHHHHHHh
Q 014316 411 LF-SSSSELADQLLVN 425 (427)
Q Consensus 411 l~-~~~~~la~~l~~~ 425 (427)
++ .|+++++++|.++
T Consensus 316 lv~~d~~~i~~ai~~l 331 (365)
T TIGR00236 316 LVGTDKENITKAAKRL 331 (365)
T ss_pred EeCCCHHHHHHHHHHH
Confidence 66 6889999998775
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-17 Score=166.81 Aligned_cols=311 Identities=17% Similarity=0.143 Sum_probs=177.7
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHH
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (427)
+++| +.|+.|+.---...+.+|.+. ++++.+++..+.. ..+..-..++..+.++ . ..+ ...+..+.+.+
T Consensus 3 ki~i-~~Ggt~G~i~~a~l~~~L~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~--~---~g~---~~~~~~~~~~~ 71 (380)
T PRK00025 3 RIAI-VAGEVSGDLLGAGLIRALKAR-APNLEFVGVGGPR-MQAAGCESLFDMEELA--V---MGL---VEVLPRLPRLL 71 (380)
T ss_pred eEEE-EecCcCHHHHHHHHHHHHHhc-CCCcEEEEEccHH-HHhCCCccccCHHHhh--h---ccH---HHHHHHHHHHH
Confidence 3444 444444322222356666664 7899999865432 2211111233333333 1 111 11122222222
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc
Q 014316 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (427)
.....+ ..++ +..+||+||++..+.++..+ + ..++..++|+++..++..|. . .. . .. +.+.+
T Consensus 72 ~~~~~~-~~~l-~~~kPdivi~~~~~~~~~~~-a-~~a~~~~ip~i~~~~~~~~~-----~-~~---~----~~-~~~~~ 133 (380)
T PRK00025 72 KIRRRL-KRRL-LAEPPDVFIGIDAPDFNLRL-E-KKLRKAGIPTIHYVSPSVWA-----W-RQ---G----RA-FKIAK 133 (380)
T ss_pred HHHHHH-HHHH-HHcCCCEEEEeCCCCCCHHH-H-HHHHHCCCCEEEEeCCchhh-----c-Cc---h----HH-HHHHH
Confidence 211111 1112 34799999998743333322 2 33455699998876654220 0 00 0 11 12356
Q ss_pred cCCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
.+|.+++.|+..++.+.+ +|.++.++.|.-.+...... .+....
T Consensus 134 ~~d~i~~~~~~~~~~~~~-~g~~~~~~G~p~~~~~~~~~--~~~~~~--------------------------------- 177 (380)
T PRK00025 134 ATDHVLALFPFEAAFYDK-LGVPVTFVGHPLADAIPLLP--DRAAAR--------------------------------- 177 (380)
T ss_pred HHhhheeCCccCHHHHHh-cCCCeEEECcCHHHhccccc--ChHHHH---------------------------------
Confidence 789999999998888765 46665555444111111111 111111
Q ss_pred ccccccccCCCCCeEEEEEee-cCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 246 LAGIDVFLKPNRPALVVSSTS-WTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~-~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
.+++.+++++.++++.|+ .... +.++.+++|++.+.++ .|+++++++|
T Consensus 178 ---~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~---------------------------~~~~~~ii~~ 227 (380)
T PRK00025 178 ---ARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR---------------------------YPDLRFVLPL 227 (380)
T ss_pred ---HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEec
Confidence 122444555544555553 3333 4478899999988765 6889999998
Q ss_pred C-CCChHHHHHHHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-------
Q 014316 324 K-GPDKESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV------- 394 (427)
Q Consensus 324 ~-G~~~~~~~~~~~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas------- 394 (427)
+ ++..+++++.++++ ++. +.+. .+++..+|+.||++|++ | |...+|||++|+|+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-v~~~-----~~~~~~~~~~aDl~v~~---s-----G~~~lEa~a~G~PvI~~~~~~~~~ 293 (380)
T PRK00025 228 VNPKRREQIEEALAEYAGLE-VTLL-----DGQKREAMAAADAALAA---S-----GTVTLELALLKVPMVVGYKVSPLT 293 (380)
T ss_pred CChhhHHHHHHHHhhcCCCC-eEEE-----cccHHHHHHhCCEEEEC---c-----cHHHHHHHHhCCCEEEEEccCHHH
Confidence 6 66667788877776 553 4442 35899999999999985 3 66888999999999987
Q ss_pred ----------ccCccccceecCC--cEEEe--CChHHHHHHHHHh
Q 014316 395 ----------SYSCIEELVKVDK--NGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 395 ----------~~~g~~e~v~~~~--~G~l~--~~~~~la~~l~~~ 425 (427)
+.+++++++.++. .+++. .+++++++.+.++
T Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 338 (380)
T PRK00025 294 FWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPL 338 (380)
T ss_pred HHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHH
Confidence 4566677776654 44555 4578899888765
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.1e-16 Score=159.95 Aligned_cols=223 Identities=12% Similarity=0.173 Sum_probs=146.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHH-HhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWA-SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~-~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..+||+|+++.|. + .++.+. ++..++|++...+|+.. . ..|+.+.+|.+++.|+.+
T Consensus 102 ~~kPDvVi~~~p~--~--~~~~l~~~~~~~iP~~~v~td~~~-------~------------~~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 102 KEKPDLILLTFPT--P--VMSVLTEQFNINIPVATVMTDYRL-------H------------KNWITPYSTRYYVATKET 158 (391)
T ss_pred HhCcCEEEECCcH--H--HHHHHHHhcCCCCCEEEEeCCCCc-------c------------cccccCCCCEEEECCHHH
Confidence 4899999998642 2 212222 23458897654444411 0 013457899999999999
Q ss_pred HHHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 178 ~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
++.+.+. |.+ +.++.++....|.... .+.+.+ .+++++
T Consensus 159 ~~~l~~~-gi~~~ki~v~GiPv~~~f~~~~--~~~~~~------------------------------------~~~~l~ 199 (391)
T PRK13608 159 KQDFIDV-GIDPSTVKVTGIPIDNKFETPI--DQKQWL------------------------------------IDNNLD 199 (391)
T ss_pred HHHHHHc-CCCHHHEEEECeecChHhcccc--cHHHHH------------------------------------HHcCCC
Confidence 9998764 554 6665554223333211 111111 122455
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~~~~~~~~ 333 (427)
++++.++++.|++...|+++.+++++.. . .++++++++ |+++ +..++
T Consensus 200 ~~~~~ilv~~G~lg~~k~~~~li~~~~~---~---------------------------~~~~~~vvv~G~~~--~l~~~ 247 (391)
T PRK13608 200 PDKQTILMSAGAFGVSKGFDTMITDILA---K---------------------------SANAQVVMICGKSK--ELKRS 247 (391)
T ss_pred CCCCEEEEECCCcccchhHHHHHHHHHh---c---------------------------CCCceEEEEcCCCH--HHHHH
Confidence 6667678889999999999999998632 1 457888655 4442 22233
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCc----cccceecCC
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC----IEELVKVDK 407 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g----~~e~v~~~~ 407 (427)
+.+.++. ++|.|+|+ .++++++|+.||++|+. +.|+++.||||+|+|+|+++ .+| ...++.+.+
T Consensus 248 l~~~~~~~~~v~~~G~---~~~~~~~~~~aDl~I~k-------~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G 317 (391)
T PRK13608 248 LTAKFKSNENVLILGY---TKHMNEWMASSQLMITK-------PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKG 317 (391)
T ss_pred HHHHhccCCCeEEEec---cchHHHHHHhhhEEEeC-------CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCC
Confidence 3333433 47999998 58999999999999951 24779999999999999996 444 223445667
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
.|+..++.++++++|.++
T Consensus 318 ~g~~~~~~~~l~~~i~~l 335 (391)
T PRK13608 318 FGKIADTPEEAIKIVASL 335 (391)
T ss_pred cEEEeCCHHHHHHHHHHH
Confidence 788889999999988765
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-17 Score=140.98 Aligned_cols=129 Identities=27% Similarity=0.413 Sum_probs=95.6
Q ss_pred eEEEEEeecCCCCCHHHHHH-HHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLE-AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~ 337 (427)
.+|++.|++.+.|+++.+++ ++..+.++ .|+++|.|+|.+++ +++++
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~---------------------------~p~~~l~i~G~~~~--~l~~~--- 50 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEK---------------------------HPDIELIIIGNGPD--ELKRL--- 50 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHH---------------------------STTEEEEEECESS---HHCCH---
T ss_pred ccccccccccccccccchhhhHHHHHHHH---------------------------CcCEEEEEEeCCHH--HHHHh---
Confidence 48999999999999999999 99999887 79999999999876 24333
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-CChH
Q 014316 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSSS 416 (427)
Q Consensus 338 l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~-~~~~ 416 (427)
..++|+|+|. + +++.++++.||++++|. ...+++|.+++|||++|+|||+++. +..+++.....|+++ ++++
T Consensus 51 -~~~~v~~~g~-~--~e~~~~l~~~dv~l~p~--~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~~~~~~ 123 (135)
T PF13692_consen 51 -RRPNVRFHGF-V--EELPEILAAADVGLIPS--RFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLVANDPE 123 (135)
T ss_dssp -HHCTEEEE-S----HHHHHHHHC-SEEEE-B--SS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE-TT-HH
T ss_pred -cCCCEEEcCC-H--HHHHHHHHhCCEEEEEe--eCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEECCCHH
Confidence 1248999998 5 78999999999999973 2346899999999999999999999 677777666677666 7889
Q ss_pred HHHHHHHHhc
Q 014316 417 ELADQLLVNA 426 (427)
Q Consensus 417 ~la~~l~~~~ 426 (427)
+++++|.++.
T Consensus 124 ~l~~~i~~l~ 133 (135)
T PF13692_consen 124 ELAEAIERLL 133 (135)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998864
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.9e-15 Score=141.99 Aligned_cols=251 Identities=20% Similarity=0.287 Sum_probs=174.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccch-hhhhhhc---CCC-------chHHHHHHHHHHHHhccCC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY-TLLSLSL---GRR-------SHFVSIYRWIEKYYGKMAN 168 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~-~~~~~~~---~~~-------~~~~~~~~~~e~~~~~~ad 168 (427)
..||+.+=.- .++.. ...++++.++|++..+|...- +.+-.++ ... -.+++++..+.+..+..||
T Consensus 149 ~~Pdi~IDtM--GY~fs--~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad 224 (465)
T KOG1387|consen 149 FPPDIFIDTM--GYPFS--YPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAGSKAD 224 (465)
T ss_pred CCchheEecC--CCcch--hHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhccccce
Confidence 6899865442 22222 234566889999999995422 1111111 111 1123445556777888999
Q ss_pred EEEEcCHHHHHHHHHhhCCe-EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 169 GCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 169 ~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
.+.+.|..+++++.+-|+.. ..++| +|++.++-.+.+
T Consensus 225 ~vm~NssWT~nHI~qiW~~~~~~iVy-------PPC~~e~lks~~----------------------------------- 262 (465)
T KOG1387|consen 225 IVMTNSSWTNNHIKQIWQSNTCSIVY-------PPCSTEDLKSKF----------------------------------- 262 (465)
T ss_pred EEEecchhhHHHHHHHhhccceeEEc-------CCCCHHHHHHHh-----------------------------------
Confidence 99999999999999999775 55554 344433222211
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 327 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~ 327 (427)
+-..++...++++|.+.|+|++. +++.++.+..+... + ...++++|+|+|....
T Consensus 263 ----~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl-------------------~--a~~~~iKL~ivGScRn 316 (465)
T KOG1387|consen 263 ----GTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPL-------------------E--ASVSPIKLIIVGSCRN 316 (465)
T ss_pred ----cccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCch-------------------h--hccCCceEEEEeccCC
Confidence 11234456899999999999999 77777766554100 0 1235699999996543
Q ss_pred hH------HHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc-c
Q 014316 328 KE------SYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-I 399 (427)
Q Consensus 328 ~~------~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-~ 399 (427)
++ .++.++++|.++ +|.|.-. ++.+++-.+|+.|.++|.. -..|.||+.++||||+|+-.|+.+.|| .
T Consensus 317 eeD~ervk~Lkd~a~~L~i~~~v~F~~N-~Py~~lv~lL~~a~iGvh~---MwNEHFGIsVVEyMAAGlIpi~h~SgGP~ 392 (465)
T KOG1387|consen 317 EEDEERVKSLKDLAEELKIPKHVQFEKN-VPYEKLVELLGKATIGVHT---MWNEHFGISVVEYMAAGLIPIVHNSGGPL 392 (465)
T ss_pred hhhHHHHHHHHHHHHhcCCccceEEEec-CCHHHHHHHhccceeehhh---hhhhhcchhHHHHHhcCceEEEeCCCCCc
Confidence 32 356778889995 7999888 9999999999999999973 455999999999999999888887665 4
Q ss_pred ccceec---CCcEEEeCChHHHHHHHHHhc
Q 014316 400 EELVKV---DKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 400 ~e~v~~---~~~G~l~~~~~~la~~l~~~~ 426 (427)
-|+|.+ ..+||+..+.++.|+++.++.
T Consensus 393 lDIV~~~~G~~tGFla~t~~EYaE~iLkIv 422 (465)
T KOG1387|consen 393 LDIVTPWDGETTGFLAPTDEEYAEAILKIV 422 (465)
T ss_pred eeeeeccCCccceeecCChHHHHHHHHHHH
Confidence 566654 347999999999999988753
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=167.92 Aligned_cols=246 Identities=11% Similarity=0.075 Sum_probs=163.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhh-hhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTL-LSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..-|+|-+|. +...++..++.. ..+.++-+.+|-. |+. .-++.-..+ ..+ ++-++ .||.|-+.|...
T Consensus 146 ~~~d~vWvhD---YhL~llp~~lR~~~~~~~igfFlHiP-FPs~e~fr~lp~r--~~i---l~gll--~aDligF~t~~y 214 (797)
T PLN03063 146 EEGDVVWCHD---YHLMFLPQYLKEYNNKMKVGWFLHTP-FPSSEIYKTLPSR--SEL---LRAVL--TADLIGFHTYDF 214 (797)
T ss_pred CCCCEEEEec---chhhhHHHHHHHhCCCCcEEEEecCC-CCCHHHHhhCCCH--HHH---HHHHh--cCCEEEeCCHHH
Confidence 4568999999 555555555544 4577888888876 411 111100000 111 11122 478887777777
Q ss_pred HHHHHHh----------------hCC--eEEEecCC-CCCCcCCCC--hHHHHHHHhhhhhcccCCCCccccccCCCCCC
Q 014316 178 QHELAQN----------------WGI--KATVLYDQ-PPEFFHPTS--LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (427)
Q Consensus 178 ~~~l~~~----------------~~~--~~~vi~n~-~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
.+++.+. .|. ++.++||| |.+.|.+.. ++.+.. ...+
T Consensus 215 ~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~-~~~l--------------------- 272 (797)
T PLN03063 215 ARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQH-MKEL--------------------- 272 (797)
T ss_pred HHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHH-HHHH---------------------
Confidence 7666431 111 27789999 777665432 111111 0000
Q ss_pred CccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC
Q 014316 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
++ ...++ .+|+++||+.+.||+..+++|++.+.++ +|+
T Consensus 273 -----------r~---~~~~~-~lIl~VgRLd~~KGi~~lL~Afe~lL~~---------------------------~P~ 310 (797)
T PLN03063 273 -----------KR---FFAGR-KVILGVDRLDMIKGIPQKYLAFEKFLEE---------------------------NPE 310 (797)
T ss_pred -----------HH---hcCCC-eEEEEecccccccCHHHHHHHHHHHHHh---------------------------Ccc
Confidence 00 01123 4899999999999999999999998876 676
Q ss_pred E----EEEEE-----eCCCChHHHHHHHHHcC--C---------CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC
Q 014316 317 L----LFIIT-----GKGPDKESYEEKIRRLR--L---------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD 376 (427)
Q Consensus 317 ~----~l~i~-----G~G~~~~~~~~~~~~l~--l---------~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~ 376 (427)
+ .|+.+ |+|+..+++++.++++. + .-|.+++..++.+++.++|+.||++|+| |.+||
T Consensus 311 ~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvt---SlrEG 387 (797)
T PLN03063 311 WRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVT---SLRDG 387 (797)
T ss_pred ccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeC---ccccc
Confidence 5 34433 34555566766676653 2 1244555448999999999999999997 88999
Q ss_pred CchHHHHHHcCCCc----EEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 377 LPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 377 ~p~~~lEama~G~P----VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
++++++||||||+| +|.|..+|..+.+ +.+|+++ .|++++|++|.++
T Consensus 388 mnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~a 440 (797)
T PLN03063 388 MNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEA 440 (797)
T ss_pred cCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHH
Confidence 99999999999999 9999999998876 5679999 5789999998764
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.5e-15 Score=143.57 Aligned_cols=247 Identities=24% Similarity=0.305 Sum_probs=171.5
Q ss_pred CcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCC-CchHH-HHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFV-SIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 102 ~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~-~~~~~-~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
+|+++.+..................+.+.+..+|+............ ..... ....+.........+.+++.+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKE 163 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEEECCHHHHH
Confidence 59999876433332222344455567888888888733111110001 01111 11112222222247889999988866
Q ss_pred HHHHhhCC-eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCC
Q 014316 180 ELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR 257 (427)
Q Consensus 180 ~l~~~~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (427)
.+...+.. +..+++|+ +.+.+.+.. .......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~ 197 (381)
T COG0438 164 LLEALGVPNKIVVIPNGIDTEKFAPAR----------------------------------------------IGLLPEG 197 (381)
T ss_pred HHHHhCCCCCceEecCCcCHHHcCccc----------------------------------------------cCCCccc
Confidence 66554433 36677777 444443210 0111111
Q ss_pred -CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-hHHHHHHH
Q 014316 258 -PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKI 335 (427)
Q Consensus 258 -~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~-~~~~~~~~ 335 (427)
...++++|++.+.||++.+++++..+.+. .+++.+.++|.|+. .+.+.+.+
T Consensus 198 ~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~~~~~g~~~~~~~~~~~~~ 250 (381)
T COG0438 198 GKFVVLYVGRLDPEKGLDLLIEAAAKLKKR---------------------------GPDIKLVIVGDGPERREELEKLA 250 (381)
T ss_pred CceEEEEeeccChhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEEcCCCccHHHHHHHH
Confidence 25899999999999999999999999876 55689999999987 36777788
Q ss_pred HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC-
Q 014316 336 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS- 413 (427)
Q Consensus 336 ~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~- 413 (427)
++++. ++|.|+|. ++.+++..+++.+|++++| |..|++|++++|||++|+|||+++.++..|++.++.+|+++.
T Consensus 251 ~~~~~~~~v~~~g~-~~~~~~~~~~~~~~~~v~p---s~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~ 326 (381)
T COG0438 251 KKLGLEDNVKFLGY-VPDEELAELLASADVFVLP---SLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPP 326 (381)
T ss_pred HHhCCCCcEEEecc-cCHHHHHHHHHhCCEEEec---cccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCC
Confidence 88876 57999886 8878899999999999997 555999999999999999999999999999998887888663
Q ss_pred -ChHHHHHHHHHh
Q 014316 414 -SSSELADQLLVN 425 (427)
Q Consensus 414 -~~~~la~~l~~~ 425 (427)
+.+++++++..+
T Consensus 327 ~~~~~~~~~i~~~ 339 (381)
T COG0438 327 GDVEELADALEQL 339 (381)
T ss_pred CCHHHHHHHHHHH
Confidence 478999988765
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-15 Score=152.42 Aligned_cols=262 Identities=19% Similarity=0.167 Sum_probs=163.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcC----CcEEEEecccchhhhhhhcCCCch-HHHHHHHHHHHHhccCCEEEEcC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR----SAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~----~p~i~~~h~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
.+.|.++... . ....++...+.+ +++.+++|.. -..+..+.+-... ......++|......+|.+++.|
T Consensus 144 ~~~d~~i~d~---~--~~~~~l~~~~~~p~~~~~i~~~~h~~-~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns 217 (495)
T KOG0853|consen 144 EKVDPIIEDF---V--SACVPLLKQLSGPDVIIKIYFYCHFP-DSLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNS 217 (495)
T ss_pred hhhceeecch---H--HHHHHHHHHhcCCcccceeEEeccch-HHHhccccCccceeehhhhhhhhhhhhhccceEecch
Confidence 5678887765 2 222344455553 4566677765 3344333322222 23334566666777899999999
Q ss_pred HHHHHHHHHhh---CCe-EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 175 QAMQHELAQNW---GIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 175 ~~~~~~l~~~~---~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
......++..+ +.. +.+.|-. +.+.+.+.. .+. ...|+...+.
T Consensus 218 ~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~-~~~-------------------------------~~~~~~~~r~ 265 (495)
T KOG0853|consen 218 YFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQ-YES-------------------------------HLELRLPVRL 265 (495)
T ss_pred hhhhhhhhhhhhhcCCCCcceeeccccchhccccc-ccc-------------------------------chhcccccce
Confidence 99988776542 111 2222222 222221100 000 0011111111
Q ss_pred ccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC-CCC-
Q 014316 250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GPD- 327 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~-G~~- 327 (427)
...... ....+..+.++.|.||+..+++|+.++... |.+ ...++.++.++|+ |.+
T Consensus 266 ~~~v~~-~d~~~~siN~~~pgkd~~l~l~a~~~~~~~-------------------i~~---~~~~~~hl~~~g~~G~d~ 322 (495)
T KOG0853|consen 266 YRGVSG-IDRFFPSINRFEPGKDQDLALPAFTLLHDS-------------------IPE---PSISSEHLVVAGSRGYDE 322 (495)
T ss_pred eeeecc-cceEeeeeeecCCCCCceeehhhHHhhhcc-------------------cCC---CCCCceEEEEecCCCccc
Confidence 112222 234778889999999999999999998765 111 2456788888883 211
Q ss_pred --------hHHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 328 --------KESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 328 --------~~~~~~~~~~l~l--~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
..++.++++++++ +.|.|+.. ..+...++..+|..+.... +.+|.||++.+||||||+||+||+.|
T Consensus 323 ~~sen~~~~~el~~lie~~~l~g~~v~~~~s---~~~~~~yrl~adt~~v~~q-Pa~E~FGiv~IEAMa~glPvvAt~~G 398 (495)
T KOG0853|consen 323 RDSENVEYLKELLSLIEEYDLLGQFVWFLPS---TTRVAKYRLAADTKGVLYQ-PANEHFGIVPIEAMACGLPVVATNNG 398 (495)
T ss_pred cchhhHHHHHHHHHHHHHhCccCceEEEecC---CchHHHHHHHHhcceEEec-CCCCCccceeHHHHhcCCCEEEecCC
Confidence 1356778899988 35888776 4444446666666655333 44499999999999999999999999
Q ss_pred ccccceecCCcEEEeCCh-H---HHHHHHHHhc
Q 014316 398 CIEELVKVDKNGLLFSSS-S---ELADQLLVNA 426 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~~~-~---~la~~l~~~~ 426 (427)
|..|+|.++.+|++++.. + .+|++|.++.
T Consensus 399 GP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~ 431 (495)
T KOG0853|consen 399 GPAEIVVHGVTGLLIDPGQEAVAELADALLKLR 431 (495)
T ss_pred CceEEEEcCCcceeeCCchHHHHHHHHHHHHHh
Confidence 999999999999999543 3 5999998865
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.5e-15 Score=160.41 Aligned_cols=243 Identities=15% Similarity=0.122 Sum_probs=156.4
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhh-hhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTL-LSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..-|+|-+|. +...++..++... ...++-+.+|-. |+. ..++.-..+ ..+ ++-. -.+|.|-+-+...
T Consensus 132 ~~~d~vwvhD---Yhl~l~p~~lr~~~~~~~igfFlH~p-fP~~~~f~~lp~~--~~l---l~~l--l~~Dligf~t~~~ 200 (726)
T PRK14501 132 RPGDVVWVHD---YQLMLLPAMLRERLPDARIGFFLHIP-FPSFEVFRLLPWR--EEI---LEGL--LGADLIGFHTYDY 200 (726)
T ss_pred CCCCEEEEeC---chhhhHHHHHHhhCCCCcEEEEeeCC-CCChHHHhhCCCh--HHH---HHHH--hcCCeEEeCCHHH
Confidence 4568999999 5555556666543 456777777765 311 111100000 011 1111 1467766666665
Q ss_pred HHHHHHh----h------------CC--eEEEecCC-CCCCcCCCCh--HHHHHHHhhhhhcccCCCCccccccCCCCCC
Q 014316 178 QHELAQN----W------------GI--KATVLYDQ-PPEFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (427)
Q Consensus 178 ~~~l~~~----~------------~~--~~~vi~n~-~~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
.+.+.+. + |. ++.++||| |.+.|.+... +.+.. ..+
T Consensus 201 ~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~-~~~---------------------- 257 (726)
T PRK14501 201 VRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEE-IRR---------------------- 257 (726)
T ss_pred HHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHH-HHH----------------------
Confidence 5544321 1 22 26788999 8777754321 11110 000
Q ss_pred CccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC
Q 014316 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
++ . ...++ .+|+++||+.+.||+..+++|++.+.+. +|+
T Consensus 258 ------lr----~---~~~~~-~~il~VgRl~~~Kgi~~~l~A~~~ll~~---------------------------~p~ 296 (726)
T PRK14501 258 ------LR----Q---DLRGR-KIILSIDRLDYTKGIPRRLLAFERFLEK---------------------------NPE 296 (726)
T ss_pred ------HH----H---HcCCC-EEEEEecCcccccCHHHHHHHHHHHHHh---------------------------Ccc
Confidence 00 0 11233 4899999999999999999999998876 564
Q ss_pred ----EEEEEEeC----C-CChHHHHHHHHHc----C-------CCcE-EEecCCCCcccHHHHHhcCcEEEeeccCCCCC
Q 014316 317 ----LLFIITGK----G-PDKESYEEKIRRL----R-------LKRV-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL 375 (427)
Q Consensus 317 ----~~l~i~G~----G-~~~~~~~~~~~~l----~-------l~~V-~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e 375 (427)
++|+++|. | +..+++++.++++ + ...| .|.|. ++.+++.++|+.||++++| |.+|
T Consensus 297 ~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~-~~~~~l~~ly~~aDv~v~~---S~~E 372 (726)
T PRK14501 297 WRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRS-LPFEELVALYRAADVALVT---PLRD 372 (726)
T ss_pred ccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCC-CCHHHHHHHHHhccEEEec---cccc
Confidence 68888873 3 3334444444432 2 1224 45566 9999999999999999997 8889
Q ss_pred CCchHHHHHHcC-----CCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 376 DLPMKVVDMFGC-----GLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 376 ~~p~~~lEama~-----G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|+|++++||||| |+||++...|+..++. .|+++ .|++++|++|.++
T Consensus 373 G~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~ 425 (726)
T PRK14501 373 GMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRA 425 (726)
T ss_pred ccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHH
Confidence 999999999999 5577777788888875 48898 5789999998764
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.5e-14 Score=141.76 Aligned_cols=279 Identities=14% Similarity=0.088 Sum_probs=163.6
Q ss_pred EEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 10 ~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
++.|+.||.---...+.+|.++ +.++.+++.++.. ..+..-..++++..++ . ..+....+.+..+.+.+++..
T Consensus 10 i~aGgtsGhi~paal~~~l~~~-~~~~~~~g~gg~~-m~~~g~~~~~~~~~l~--v---~G~~~~l~~~~~~~~~~~~~~ 82 (385)
T TIGR00215 10 LVAGEASGDILGAGLRQQLKEH-YPNARFIGVAGPR-MAAEGCEVLYSMEELS--V---MGLREVLGRLGRLLKIRKEVV 82 (385)
T ss_pred EEeCCccHHHHHHHHHHHHHhc-CCCcEEEEEccHH-HHhCcCccccChHHhh--h---ccHHHHHHHHHHHHHHHHHHH
Confidence 3445454422222566677775 8999999866432 1211111123444443 1 112122223333333343322
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCE
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
.+ + +..+||+|+..+.++++..+ ..+++..|+|+++++.--.| .. .. +--+.+.+.+|.
T Consensus 83 ~~----l-~~~kPd~vi~~g~~~~~~~~--a~aa~~~gip~v~~i~P~~w---aw---~~--------~~~r~l~~~~d~ 141 (385)
T TIGR00215 83 QL----A-KQAKPDLLVGIDAPDFNLTK--ELKKKDPGIKIIYYISPQVW---AW---RK--------WRAKKIEKATDF 141 (385)
T ss_pred HH----H-HhcCCCEEEEeCCCCccHHH--HHHHhhCCCCEEEEeCCcHh---hc---Cc--------chHHHHHHHHhH
Confidence 22 2 34899999999854444332 23566779999866421111 10 11 113455678999
Q ss_pred EEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 170 CLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
++|.++..++.+.+ .+.++.++.|+-.+.+..... .+.+.+ +
T Consensus 142 v~~~~~~e~~~~~~-~g~~~~~vGnPv~~~~~~~~~-~~~~~r------------------------------------~ 183 (385)
T TIGR00215 142 LLAILPFEKAFYQK-KNVPCRFVGHPLLDAIPLYKP-DRKSAR------------------------------------E 183 (385)
T ss_pred hhccCCCcHHHHHh-cCCCEEEECCchhhhccccCC-CHHHHH------------------------------------H
Confidence 99999998888764 467767776662122211100 111111 1
Q ss_pred ccccCCCCCeEEEEEe-ecCC-CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC
Q 014316 250 DVFLKPNRPALVVSST-SWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP 326 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g-~~~~-~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~ 326 (427)
+++++++++.++++.| |..+ .|++..+++|++.+.+. .|++++++. +++.
T Consensus 184 ~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~---------------------------~p~~~~vi~~~~~~ 236 (385)
T TIGR00215 184 KLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ---------------------------EPDLRRVLPVVNFK 236 (385)
T ss_pred HcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCch
Confidence 2244555564444444 5555 68999999999998776 788888665 4666
Q ss_pred ChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 327 DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..+.+++..++++.. +|.+.+. ++..+|++||++|++ | |.+.+|+|++|+|+|.+
T Consensus 237 ~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~l~aADl~V~~---S-----Gt~tlEa~a~G~P~Vv~ 292 (385)
T TIGR00215 237 RRLQFEQIKAEYGPDLQLHLIDG-----DARKAMFAADAALLA---S-----GTAALEAALIKTPMVVG 292 (385)
T ss_pred hHHHHHHHHHHhCCCCcEEEECc-----hHHHHHHhCCEEeec---C-----CHHHHHHHHcCCCEEEE
Confidence 667777777777654 5666542 567899999999986 3 66778999999999988
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-13 Score=142.91 Aligned_cols=132 Identities=23% Similarity=0.279 Sum_probs=113.0
Q ss_pred CeEEEEEe--ecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh---HHHH
Q 014316 258 PALVVSST--SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYE 332 (427)
Q Consensus 258 ~~~i~~~g--~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~---~~~~ 332 (427)
+..+++++ |+ ++|.++.+|+|+..+.+. .|++.|.+.|.|... ..++
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~---------------------------~p~~~L~~~gy~~~~~~~~~l~ 370 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILK---------------------------NPDYELKILTYNNDNDITQLLE 370 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhh---------------------------CCCeEEEEEEecCchhHHHHHH
Confidence 34688888 99 999999999999999887 899999999987543 5566
Q ss_pred HHHHHcCCC------------------------------cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHH
Q 014316 333 EKIRRLRLK------------------------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV 382 (427)
Q Consensus 333 ~~~~~l~l~------------------------------~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~l 382 (427)
+++++++++ +|.|.|. .+..++.+.|..+.++|.+ |..|+|+ .++
T Consensus 371 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy-~~e~dl~~~~~~arl~id~---s~~eg~~-~~i 445 (519)
T TIGR03713 371 DILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL-TNEEDLISALDKLRLIIDL---SKEPDLY-TQI 445 (519)
T ss_pred HHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec-CCHHHHHHHHhhheEEEEC---CCCCChH-HHH
Confidence 666666444 6999997 4555999999999999986 8889999 999
Q ss_pred HHHcCCCcEEEeccCccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 383 DMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 383 Eama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
||+++|+|+| .-|..++|.|+.||+++++.++|+++|..+
T Consensus 446 eAiS~GiPqI---nyg~~~~V~d~~NG~li~d~~~l~~al~~~ 485 (519)
T TIGR03713 446 SGISAGIPQI---NKVETDYVEHNKNGYIIDDISELLKALDYY 485 (519)
T ss_pred HHHHcCCCee---ecCCceeeEcCCCcEEeCCHHHHHHHHHHH
Confidence 9999999999 445699999999999999999999998654
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.3e-14 Score=121.64 Aligned_cols=152 Identities=20% Similarity=0.236 Sum_probs=85.8
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 014316 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (427)
Q Consensus 20 r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (427)
.+...+.+|+++ ||+|+|+++....... .....++++++++... .............+.+.+ ..+.
T Consensus 6 ~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l----------~~~~ 71 (160)
T PF13579_consen 6 YVRELARALAAR-GHEVTVVTPQPDPEDD-EEEEDGVRVHRLPLPR--RPWPLRLLRFLRRLRRLL----------AARR 71 (160)
T ss_dssp HHHHHHHHHHHT-T-EEEEEEE---GGG--SEEETTEEEEEE--S---SSSGGGHCCHHHHHHHHC----------HHCT
T ss_pred HHHHHHHHHHHC-CCEEEEEecCCCCccc-ccccCCceEEeccCCc--cchhhhhHHHHHHHHHHH----------hhhc
Confidence 356677888886 9999999987655322 2345689999998321 111111222222222221 1134
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|+ ....+++.++++..++|+|+++|+... .........+++++++.+.+.||.++++|+.+++
T Consensus 72 ~~~Dvv~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~------~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 142 (160)
T PF13579_consen 72 ERPDVVHAHS---PTAGLVAALARRRRGIPLVVTVHGTLF------RRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRR 142 (160)
T ss_dssp ---SEEEEEH---HHHHHHHHHHHHHHT--EEEE-SS-T------------HHHHHHHHHHHHHHHH-SEEEESSHHHHH
T ss_pred cCCeEEEecc---cchhHHHHHHHHccCCcEEEEECCCch------hhccchhhHHHHHHHHHHHhcCCEEEECCHHHHH
Confidence 7999999998 344555666665779999999998632 1112334667788999999999999999999999
Q ss_pred HHHHhhCCe---EEEecCC
Q 014316 180 ELAQNWGIK---ATVLYDQ 195 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~ 195 (427)
.+.+ ++.+ +.|||||
T Consensus 143 ~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 143 YLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HHHH-H---GGGEEE----
T ss_pred HHHH-hCCCCCcEEEeCcC
Confidence 9988 6665 9999997
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.6e-11 Score=125.95 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=109.1
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC----EEEEEEeCCC--------
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKGP-------- 326 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~i~G~G~-------- 326 (427)
.+|++++|+...||+...++|+..+.++ +|+ ++|+++|.+.
T Consensus 286 kiIl~VDRLDy~KGI~~kl~Afe~~L~~---------------------------~Pe~~gkv~Lvqi~~psr~~v~~y~ 338 (487)
T TIGR02398 286 KLILSAERVDYTKGILEKLNAYERLLER---------------------------RPELLGKVTLVTACVPAASGMTIYD 338 (487)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHh---------------------------CccccCceEEEEEeCCCcccchHHH
Confidence 4899999999999999999999999876 674 6899998763
Q ss_pred -ChHHHHHHHHHc-------CCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC----cEEE
Q 014316 327 -DKESYEEKIRRL-------RLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCA 393 (427)
Q Consensus 327 -~~~~~~~~~~~l-------~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~----PVIa 393 (427)
.+.++++++.+. ++.. +.|.+. ++.+++..+|+.||+++.+ |.++|+.++..|||||+. |+|.
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~-v~~~el~alYr~ADV~lvT---~lrDGmNLVa~Eyva~~~~~~GvLIL 414 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTRS-LPYEEVSAWFAMADVMWIT---PLRDGLNLVAKEYVAAQGLLDGVLVL 414 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcCC-CCHHHHHHHHHhCCEEEEC---ccccccCcchhhHHhhhcCCCCCEEE
Confidence 234455555554 3433 566666 9999999999999999986 888999999999999998 9999
Q ss_pred eccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 394 VSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|..+|..+.+ ..++++ -|++++|++|...
T Consensus 415 SefaGaa~~l---~~AllVNP~d~~~~A~ai~~A 445 (487)
T TIGR02398 415 SEFAGAAVEL---KGALLTNPYDPVRMDETIYVA 445 (487)
T ss_pred eccccchhhc---CCCEEECCCCHHHHHHHHHHH
Confidence 9999888766 357888 4689999988753
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.3e-12 Score=113.40 Aligned_cols=94 Identities=20% Similarity=0.336 Sum_probs=58.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|.+..... +.+... ++|.++++|+..+. ........+....+...+++...+.+|.++|+|+.+++
T Consensus 79 ~~~DiVh~~~~~~~~~---~~~~~~--~~~~v~~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~ 152 (177)
T PF13439_consen 79 EKPDIVHIHGPPAFWI---ALLACR--KVPIVYTIHGPYFE-RRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKD 152 (177)
T ss_dssp HT-SEEECCTTHCCCH---HHHHHH--CSCEEEEE-HHH---HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHH
T ss_pred cCCCeEEecccchhHH---HHHhcc--CCCEEEEeCCCccc-ccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHH
Confidence 6999999998433221 222222 89999999998421 11111233444555556667778899999999999999
Q ss_pred HHHHhhCCe---EEEecCC-CCCCc
Q 014316 180 ELAQNWGIK---ATVLYDQ-PPEFF 200 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~-~~~~f 200 (427)
++.+ +|.+ +.||||| |.+.|
T Consensus 153 ~l~~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 153 ELIK-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHH-HT--SS-EEE----B-CCCH
T ss_pred HHHH-hCCcccCCEEEECCccHHHc
Confidence 9999 7754 9999999 88777
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.1e-10 Score=110.92 Aligned_cols=294 Identities=11% Similarity=0.069 Sum_probs=153.4
Q ss_pred hhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 014316 19 PRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL 95 (427)
Q Consensus 19 ~r~~~~a~~La~~---~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (427)
+|..+=|+++++. .||+|.+++...+- ..+.....|+.++.++ ..+..+. ..++.++.+.+.+...++.++
T Consensus 12 GGHi~Pala~a~~l~~~g~~v~~vg~~~~~-e~~l~~~~g~~~~~~~--~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-- 85 (352)
T PRK12446 12 AGHVTPNLAIIPYLKEDNWDISYIGSHQGI-EKTIIEKENIPYYSIS--SGKLRRY-FDLKNIKDPFLVMKGVMDAYV-- 85 (352)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEECCCcc-ccccCcccCCcEEEEe--ccCcCCC-chHHHHHHHHHHHHHHHHHHH--
Confidence 4555544444433 59999999855443 3344455588888887 3222111 022233333344433322222
Q ss_pred HhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 96 CVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 96 ~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
+.+..+||+|+++. .+.++. +.+++++.++|++++-.+... ....+.+.+.+|.+.+--+
T Consensus 86 i~~~~kPdvvi~~G--gy~s~p-~~~aa~~~~~p~~i~e~n~~~-----------------g~~nr~~~~~a~~v~~~f~ 145 (352)
T PRK12446 86 RIRKLKPDVIFSKG--GFVSVP-VVIGGWLNRVPVLLHESDMTP-----------------GLANKIALRFASKIFVTFE 145 (352)
T ss_pred HHHhcCCCEEEecC--chhhHH-HHHHHHHcCCCEEEECCCCCc-----------------cHHHHHHHHhhCEEEEEcc
Confidence 12458999999987 333333 568889999998875554411 1122455677888866433
Q ss_pred HHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 176 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 176 ~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
...+.+. ..++.+.-|.--..|.... +.+ .+..+++.+
T Consensus 146 ~~~~~~~---~~k~~~tG~Pvr~~~~~~~---~~~------------------------------------~~~~~~l~~ 183 (352)
T PRK12446 146 EAAKHLP---KEKVIYTGSPVREEVLKGN---REK------------------------------------GLAFLGFSR 183 (352)
T ss_pred chhhhCC---CCCeEEECCcCCccccccc---chH------------------------------------HHHhcCCCC
Confidence 3222221 1123333332111221111 001 011124455
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EEEeCCCChHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i~G~G~~~~~~~~~ 334 (427)
+++.++++.|+..- ..+-+++..+.... ..++++ +++|... +++.
T Consensus 184 ~~~~iLv~GGS~Ga----~~in~~~~~~l~~l--------------------------~~~~~vv~~~G~~~----~~~~ 229 (352)
T PRK12446 184 KKPVITIMGGSLGA----KKINETVREALPEL--------------------------LLKYQIVHLCGKGN----LDDS 229 (352)
T ss_pred CCcEEEEECCccch----HHHHHHHHHHHHhh--------------------------ccCcEEEEEeCCch----HHHH
Confidence 66766677777543 33334333322210 113444 4556542 2222
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-----c----cccceec
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-----C----IEELVKV 405 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-----g----~~e~v~~ 405 (427)
.... .++...++ -.++++++|+.||++|+ .. =++++.|++++|+|.|..... + ..+.+.+
T Consensus 230 ~~~~--~~~~~~~f--~~~~m~~~~~~adlvIs-----r~--G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~ 298 (352)
T PRK12446 230 LQNK--EGYRQFEY--VHGELPDILAITDFVIS-----RA--GSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER 298 (352)
T ss_pred Hhhc--CCcEEecc--hhhhHHHHHHhCCEEEE-----CC--ChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH
Confidence 2222 24444465 13789999999999995 21 234899999999999998643 1 1224444
Q ss_pred CCcEEEeC----ChHHHHHHHHHh
Q 014316 406 DKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 406 ~~~G~l~~----~~~~la~~l~~~ 425 (427)
...|..+. +++.+++.+.++
T Consensus 299 ~g~~~~l~~~~~~~~~l~~~l~~l 322 (352)
T PRK12446 299 QGYASVLYEEDVTVNSLIKHVEEL 322 (352)
T ss_pred CCCEEEcchhcCCHHHHHHHHHHH
Confidence 55565552 357788777654
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-09 Score=109.21 Aligned_cols=285 Identities=21% Similarity=0.196 Sum_probs=157.8
Q ss_pred HHHHHHHHHhhCCCc-EEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcc--hhhHHHHHHHHHHHHHHHHHHHHh
Q 014316 21 MQYQALSLARQMSLE-VDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPK--VLKPVLLLLKPLIQFFMLLWFLCV 97 (427)
Q Consensus 21 ~~~~a~~La~~~g~~-V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 97 (427)
.+-.+.+|.++ |++ |.++..... .........+++++.++ ..+.++... ..+....+++.+.+...++
T Consensus 17 AlAl~~~l~~~-g~~~v~~~~~~~~-~e~~l~~~~~~~~~~I~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~il----- 87 (357)
T COG0707 17 ALALAEELAKR-GWEQVIVLGTGDG-LEAFLVKQYGIEFELIP--SGGLRRKGSLKLLKAPFKLLKGVLQARKIL----- 87 (357)
T ss_pred HHHHHHHHHhh-CccEEEEeccccc-ceeeeccccCceEEEEe--cccccccCcHHHHHHHHHHHHHHHHHHHHH-----
Confidence 44455667775 995 555533222 23334445589999998 332222211 1222223333333322222
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
+..+||+|+... .+++.. +.++++..++|++++..|.. .+. .. ++..+.|+.|.+--..
T Consensus 88 ~~~kPd~vig~G--gyvs~P-~~~Aa~~~~iPv~ihEqn~~-------~G~------an----k~~~~~a~~V~~~f~~- 146 (357)
T COG0707 88 KKLKPDVVIGTG--GYVSGP-VGIAAKLLGIPVIIHEQNAV-------PGL------AN----KILSKFAKKVASAFPK- 146 (357)
T ss_pred HHcCCCEEEecC--CccccH-HHHHHHhCCCCEEEEecCCC-------cch------hH----HHhHHhhceeeecccc-
Confidence 348999999965 244444 56778888999998888772 121 11 2233455555443222
Q ss_pred HHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 178 QHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 178 ~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
...+.. ++.+.-|. ..+++. .+ ....+ ....
T Consensus 147 ----~~~~~~~~~~~~tG~Pvr~~~~~-~~-~~~~~----------------------------------------~~~~ 180 (357)
T COG0707 147 ----LEAGVKPENVVVTGIPVRPEFEE-LP-AAEVR----------------------------------------KDGR 180 (357)
T ss_pred ----ccccCCCCceEEecCcccHHhhc-cc-hhhhh----------------------------------------hhcc
Confidence 111111 13344443 222222 11 01111 0111
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC-CEEE-EEEeCCCChHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP-RLLF-IITGKGPDKESYE 332 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l-~i~G~G~~~~~~~ 332 (427)
.+.+.++++-|+. |...+-+++...... .. ++.+ .++|.+. .+++.
T Consensus 181 ~~~~~ilV~GGS~----Ga~~ln~~v~~~~~~---------------------------l~~~~~v~~~~G~~~-~~~~~ 228 (357)
T COG0707 181 LDKKTILVTGGSQ----GAKALNDLVPEALAK---------------------------LANRIQVIHQTGKND-LEELK 228 (357)
T ss_pred CCCcEEEEECCcc----hhHHHHHHHHHHHHH---------------------------hhhCeEEEEEcCcch-HHHHH
Confidence 2455566666665 444444444444332 22 3554 5556555 56666
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--------cccee
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVK 404 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~--------~e~v~ 404 (427)
+...+++. +...++ .+++.++|+.||++|+ -.+ ++++.|..++|+|+|--..+.. ...+.
T Consensus 229 ~~~~~~~~--~~v~~f---~~dm~~~~~~ADLvIs----RaG---a~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~ 296 (357)
T COG0707 229 SAYNELGV--VRVLPF---IDDMAALLAAADLVIS----RAG---ALTIAELLALGVPAILVPYPPGADGHQEYNAKFLE 296 (357)
T ss_pred HHHhhcCc--EEEeeH---HhhHHHHHHhccEEEe----CCc---ccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHH
Confidence 66666665 888899 8999999999999996 111 2489999999999999875443 33455
Q ss_pred cCCcEEEeCC----hHHHHHHHHHh
Q 014316 405 VDKNGLLFSS----SSELADQLLVN 425 (427)
Q Consensus 405 ~~~~G~l~~~----~~~la~~l~~~ 425 (427)
+...|.++.+ ++.+++.|.++
T Consensus 297 ~~gaa~~i~~~~lt~~~l~~~i~~l 321 (357)
T COG0707 297 KAGAALVIRQSELTPEKLAELILRL 321 (357)
T ss_pred hCCCEEEeccccCCHHHHHHHHHHH
Confidence 5666777733 46788777665
|
|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.7e-10 Score=101.03 Aligned_cols=175 Identities=14% Similarity=0.179 Sum_probs=114.7
Q ss_pred cceEEEEEeCCC-CCChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHH
Q 014316 4 RGRACVVVLGDL-GRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVL 79 (427)
Q Consensus 4 ~~~~~v~~~~~~-~~~~r~~~~a~~La~~---~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~ 79 (427)
|+++.|+-.-++ ...+|+.+++..|+.. .|++|+|.|...... .......|+++..+| .........+...+.
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~-~~~~~y~gv~l~~i~--~~~~g~~~si~yd~~ 77 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYP-YKEFEYNGVRLVYIP--APKNGSAESIIYDFL 77 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCC-CCCcccCCeEEEEeC--CCCCCchHHHHHHHH
Confidence 456777665434 3677888888777665 599999999765432 234445699999998 322221222222222
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhhhhhcCCCchH-HHHH
Q 014316 80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIY 156 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~ 156 (427)
.+...+. .......+.|+++++... . ..++..+...+ .|.|++++.|+..| +..+++.+ ++++
T Consensus 78 sl~~al~-------~~~~~~~~~~ii~ilg~~-~-g~~~~~~~r~~~~~g~~v~vN~DGlEW-----kR~KW~~~~k~~l 143 (185)
T PF09314_consen 78 SLLHALR-------FIKQDKIKYDIILILGYG-I-GPFFLPFLRKLRKKGGKVVVNMDGLEW-----KRAKWGRPAKKYL 143 (185)
T ss_pred HHHHHHH-------HHhhccccCCEEEEEcCC-c-cHHHHHHHHhhhhcCCcEEECCCcchh-----hhhhcCHHHHHHH
Confidence 2222211 111112368899998832 1 22324455544 36799999999977 12244444 6778
Q ss_pred HHHHHHHhccCCEEEEcCHHHHHHHHHhhC-CeEEEecCC
Q 014316 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWG-IKATVLYDQ 195 (427)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~-~~~~vi~n~ 195 (427)
++-|+.+.+.||.+|+-|+..++++.++|+ .+.++|++|
T Consensus 144 k~~E~~avk~ad~lIaDs~~I~~y~~~~y~~~~s~~IaYG 183 (185)
T PF09314_consen 144 KFSEKLAVKYADRLIADSKGIQDYIKERYGRKKSTFIAYG 183 (185)
T ss_pred HHHHHHHHHhCCEEEEcCHHHHHHHHHHcCCCCcEEecCC
Confidence 889999999999999999999999999999 678899887
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.3e-09 Score=114.47 Aligned_cols=142 Identities=12% Similarity=0.040 Sum_probs=109.2
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC------
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD------ 327 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~------ 327 (427)
.++.+ ++++++|+..+|+.+.+++++..+.+.... +...+.|++.|+|.-
T Consensus 386 dpd~~-~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~-----------------------~~~pvq~V~~Gka~p~d~~gk 441 (601)
T TIGR02094 386 DPDVL-TIGFARRFATYKRADLIFRDLERLARILNN-----------------------PERPVQIVFAGKAHPADGEGK 441 (601)
T ss_pred CCCCc-EEEEEEcchhhhhHHHHHHHHHHHHHHhhC-----------------------CCCCeEEEEEEecCcccchHH
Confidence 44444 899999999999999999999988753100 013589999999852
Q ss_pred --hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEe-eccCCC-CCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 328 --KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC-LHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 328 --~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~-p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
...+.+++++... ++|.|+-. .+.+-...++++||++++ | |. .|.+|+.-+=||..|.+.+++-.|...|.
T Consensus 442 ~~i~~i~~la~~~~~~~kv~f~~~-Yd~~lA~~i~aG~Dv~L~~P---sr~~EacGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 442 EIIQRIVEFSKRPEFRGRIVFLEN-YDINLARYLVSGVDVWLNNP---RRPLEASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHHHHhcccCCCCEEEEcC-CCHHHHHHHhhhheeEEeCC---CCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence 2233444443223 37888776 678888899999999998 5 76 69999999999999999999999988887
Q ss_pred eecCCcEEEeC--------------ChHHHHHHHHH
Q 014316 403 VKVDKNGLLFS--------------SSSELADQLLV 424 (427)
Q Consensus 403 v~~~~~G~l~~--------------~~~~la~~l~~ 424 (427)
. ++.|||.++ ++++|-++|++
T Consensus 518 ~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ 552 (601)
T TIGR02094 518 Y-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLEN 552 (601)
T ss_pred C-CCCcEEEECCCccccccccccCCCHHHHHHHHHH
Confidence 7 678999996 24677777754
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.1e-09 Score=118.70 Aligned_cols=134 Identities=10% Similarity=0.129 Sum_probs=103.4
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE--EEEE-------eCCCChH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL--FIIT-------GKGPDKE 329 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~i~-------G~G~~~~ 329 (427)
.+|++++|+.+.||+...++|+..+.++ +|+++ ++++ |+++..+
T Consensus 364 kiIlgVDRLD~~KGI~~kL~AfE~fL~~---------------------------~Pe~r~kVVLvQIa~psr~~v~eY~ 416 (934)
T PLN03064 364 KVMLGVDRLDMIKGIPQKILAFEKFLEE---------------------------NPEWRDKVVLLQIAVPTRTDVPEYQ 416 (934)
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEcCCCCCCcHHHH
Confidence 4999999999999999999999998776 67654 5555 5555544
Q ss_pred HHHH----HHHHcC----C---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcC-----CCcEEE
Q 014316 330 SYEE----KIRRLR----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC-----GLPVCA 393 (427)
Q Consensus 330 ~~~~----~~~~l~----l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~-----G~PVIa 393 (427)
++++ ++.+.+ - .-|.++..-++.+++.++|+.||+++++ |.+||+.++..||||| |++|+
T Consensus 417 ~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvT---slrDGmNLva~Eyva~~~~~~GvLIL- 492 (934)
T PLN03064 417 KLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVT---SLRDGMNLVSYEFVACQDSKKGVLIL- 492 (934)
T ss_pred HHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeC---ccccccCchHHHHHHhhcCCCCCeEE-
Confidence 4433 333332 1 1266666558899999999999999997 8999999999999999 55555
Q ss_pred eccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 394 VSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|..+|..+.+ +..+++| .|.+++|++|.+.
T Consensus 493 SEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~A 524 (934)
T PLN03064 493 SEFAGAAQSL--GAGAILVNPWNITEVAASIAQA 524 (934)
T ss_pred eCCCchHHHh--CCceEEECCCCHHHHHHHHHHH
Confidence 8888877777 5568898 4689999998763
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.3e-09 Score=105.21 Aligned_cols=233 Identities=12% Similarity=0.121 Sum_probs=138.5
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHhhcCCcEEE---EecccchhhhhhhcCCCchHHH-----HHHH-HHHHHhccCCEEE
Q 014316 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV---DWHNFGYTLLSLSLGRRSHFVS-----IYRW-IEKYYGKMANGCL 171 (427)
Q Consensus 101 ~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~---~~h~~~~~~~~~~~~~~~~~~~-----~~~~-~e~~~~~~ad~vi 171 (427)
+||+|++-. .++..+++++.|+|+++ +-.+..|.... .......+.+ ..-| ..+...+.||.+.
T Consensus 93 ~p~~v~~~G------g~v~~~aA~~~~~p~~~~~~~esn~~~~~~~-~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v~ 165 (396)
T TIGR03492 93 KGDLIVAVG------DIVPLLFAWLSGKPYAFVGTAKSDYYWESGP-RRSPSDEYHRLEGSLYLPWERWLMRSRRCLAVF 165 (396)
T ss_pred cCCEEEEEC------cHHHHHHHHHcCCCceEEEeeccceeecCCC-CCccchhhhccCCCccCHHHHHHhhchhhCEEe
Confidence 899999986 22256778889999877 44444221000 0000000000 0112 1245667899999
Q ss_pred EcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccc
Q 014316 172 CVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
+-.+...+.+.+ .|.++.++-|.-.+.+..... .
T Consensus 166 ~~~~~t~~~l~~-~g~k~~~vGnPv~d~l~~~~~----~----------------------------------------- 199 (396)
T TIGR03492 166 VRDRLTARDLRR-QGVRASYLGNPMMDGLEPPER----K----------------------------------------- 199 (396)
T ss_pred CCCHHHHHHHHH-CCCeEEEeCcCHHhcCccccc----c-----------------------------------------
Confidence 989888888865 467777666651111111100 0
Q ss_pred ccCCCCCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CCCCh
Q 014316 252 FLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDK 328 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G~~~ 328 (427)
.+.++.+.+++.-|+-. ..+++..+++++..+.+ .+++.|++.= .+.+.
T Consensus 200 ~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~----------------------------~~~~~~v~~~~~~~~~ 251 (396)
T TIGR03492 200 PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPD----------------------------SQPFVFLAAIVPSLSL 251 (396)
T ss_pred ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhh----------------------------CCCeEEEEEeCCCCCH
Confidence 12233444566666543 33577799999988753 2567765543 45566
Q ss_pred HHHHHHHHHcCCC---------------cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 329 ESYEEKIRRLRLK---------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 329 ~~~~~~~~~l~l~---------------~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
+.+++.+++.++. ++.+..+ .+++.++|+.||++|+- .|.+..|++++|+|+|.
T Consensus 252 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~l~~ADlvI~r--------SGt~T~E~a~lg~P~Il 320 (396)
T TIGR03492 252 EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG---RGAFAEILHWADLGIAM--------AGTATEQAVGLGKPVIQ 320 (396)
T ss_pred HHHHHHHHhcCceecCCccccchhhccCceEEEec---hHhHHHHHHhCCEEEEC--------cCHHHHHHHHhCCCEEE
Confidence 7777777665542 2566565 67899999999999973 34566999999999999
Q ss_pred eccCccc---cceec-----CCcEEEe-CChHHHHHHHHHh
Q 014316 394 VSYSCIE---ELVKV-----DKNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g~~---e~v~~-----~~~G~l~-~~~~~la~~l~~~ 425 (427)
....+.. .+.+. +....+. .+.+.+++.+.++
T Consensus 321 ip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~l 361 (396)
T TIGR03492 321 LPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQL 361 (396)
T ss_pred EeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHH
Confidence 9854431 11221 3233333 4468888877654
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.3e-08 Score=101.27 Aligned_cols=236 Identities=16% Similarity=0.122 Sum_probs=136.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+|+++. .....+.+.++++..++|++ ++|+-..+ .+ . .- ....+.+.+.|+..++.++..++
T Consensus 92 ~~Pd~vlv~G--D~~~~la~alaA~~~~IPv~-HveaG~rs-----~~--~-~e---E~~r~~i~~la~l~f~~t~~~~~ 157 (365)
T TIGR03568 92 LKPDLVVVLG--DRFEMLAAAIAAALLNIPIA-HIHGGEVT-----EG--A-ID---ESIRHAITKLSHLHFVATEEYRQ 157 (365)
T ss_pred hCCCEEEEeC--CchHHHHHHHHHHHhCCcEE-EEECCccC-----CC--C-ch---HHHHHHHHHHHhhccCCCHHHHH
Confidence 8899999997 23344447888999999965 45544221 11 1 11 11123445678888889999998
Q ss_pred HHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
.+.+. |.+ +.++-|...+.+.......+.++.. +++++.+
T Consensus 158 ~L~~e-g~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~------------------------------------~lgl~~~ 200 (365)
T TIGR03568 158 RVIQM-GEDPDRVFNVGSPGLDNILSLDLLSKEELEE------------------------------------KLGIDLD 200 (365)
T ss_pred HHHHc-CCCCCcEEEECCcHHHHHHhhhccCHHHHHH------------------------------------HhCCCCC
Confidence 88764 432 5555554111111000001112111 1233333
Q ss_pred CCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 257 RPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 257 ~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
++.+++..-+-. .....+.+.+.++.+.+. ..++.++.-..++..+.+.+.
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---------------------------~~~~~vi~P~~~p~~~~i~~~ 253 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDEL---------------------------NKNYIFTYPNADAGSRIINEA 253 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHh---------------------------ccCCEEEEeCCCCCchHHHHH
Confidence 344434333322 223233333344443332 123444333333444444444
Q ss_pred HHHcC--CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 335 IRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 335 ~~~l~--l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
++++. .++|.+.+. ++..++..+++.|+++|.- |++ -+-||.+.|+|+|+ .+.-+|.+..|.+.+++
T Consensus 254 i~~~~~~~~~v~l~~~-l~~~~~l~Ll~~a~~vitd---SSg-----gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v 322 (365)
T TIGR03568 254 IEEYVNEHPNFRLFKS-LGQERYLSLLKNADAVIGN---SSS-----GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV 322 (365)
T ss_pred HHHHhcCCCCEEEECC-CChHHHHHHHHhCCEEEEc---Chh-----HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe
Confidence 44432 357999998 9999999999999999952 322 35899999999995 56788888888898888
Q ss_pred C-ChHHHHHHHHH
Q 014316 413 S-SSSELADQLLV 424 (427)
Q Consensus 413 ~-~~~~la~~l~~ 424 (427)
+ +++++.+++.+
T Consensus 323 g~~~~~I~~a~~~ 335 (365)
T TIGR03568 323 DPDKEEIVKAIEK 335 (365)
T ss_pred CCCHHHHHHHHHH
Confidence 4 78888888776
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-09 Score=94.27 Aligned_cols=128 Identities=17% Similarity=0.191 Sum_probs=84.2
Q ss_pred hhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014316 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (427)
Q Consensus 19 ~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (427)
......+..|.++ ||+|+++|...+. .......++++++++. . ......... ...+.+.+ +
T Consensus 11 ~~~~~~~~~L~~~-g~~V~ii~~~~~~--~~~~~~~~i~~~~~~~--~-~k~~~~~~~-~~~l~k~i------------k 71 (139)
T PF13477_consen 11 TFIYNLAKELKKR-GYDVHIITPRNDY--EKYEIIEGIKVIRLPS--P-RKSPLNYIK-YFRLRKII------------K 71 (139)
T ss_pred HHHHHHHHHHHHC-CCEEEEEEcCCCc--hhhhHhCCeEEEEecC--C-CCccHHHHH-HHHHHHHh------------c
Confidence 4567778889986 9999999986543 3333456999999972 1 111111111 11222222 3
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcC-CcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~-~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
..+||+||+|.+. +..+++.+++++.+ +|+|++.|+... . ......++.+++++++.++||.+++.|
T Consensus 72 ~~~~DvIh~h~~~--~~~~~~~l~~~~~~~~~~i~~~hg~~~------~-~~~~~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 72 KEKPDVIHCHTPS--PYGLFAMLAKKLLKNKKVIYTVHGSDF------Y-NSSKKKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred cCCCCEEEEecCC--hHHHHHHHHHHHcCCCCEEEEecCCee------e-cCCchHHHHHHHHHHHHHhCCEEEEcC
Confidence 4889999999943 22454677777777 999999998743 1 122223367889999999999999875
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.8e-09 Score=109.36 Aligned_cols=226 Identities=16% Similarity=0.162 Sum_probs=125.9
Q ss_pred HHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHH-HH-HHHhhhhhcccCCCCccccccCC
Q 014316 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEE-KH-ELFCRLNKILHQPLGVQDCVSNG 232 (427)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (427)
..+|+...+.||.+.+||+-+..+-...++.+ =.|+||| +.+.|.....-. .+ .-..++.
T Consensus 212 ~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~---------------- 275 (633)
T PF05693_consen 212 HSIERAAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIH---------------- 275 (633)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHHHHHHHHSS--SEE----B-GGGTSSTTHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCCccccccccchHHHHHHHHHHHHHH----------------
Confidence 56899999999999999999999887767666 4788999 767666554211 11 1111111
Q ss_pred CCCCCccchhhh-cccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhc------------------
Q 014316 233 MEGQKADETIFT-SLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILN------------------ 292 (427)
Q Consensus 233 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~------------------ 292 (427)
.|- ...-..+...+++.++|..+||.+ ..||++.+|||++.|.+.......
T Consensus 276 ---------~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ 346 (633)
T PF05693_consen 276 ---------EFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFN 346 (633)
T ss_dssp ---------HHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-
T ss_pred ---------HHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcC
Confidence 110 001111233455677888999998 889999999999999875322100
Q ss_pred --------------cCCCchhhhhh---------hhhcCCcc-------------------cCCCCEE-EEEEeCCCChH
Q 014316 293 --------------EDDSTNEEVFL---------KEISDGKQ-------------------YLYPRLL-FIITGKGPDKE 329 (427)
Q Consensus 293 --------------~~~~~~~~~~~---------~~~~~~~~-------------------~~~~~~~-l~i~G~G~~~~ 329 (427)
+--..+|+-+- ..+|+.++ ...|-+. -.+. ....+
T Consensus 347 ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~--d~~~D 424 (633)
T PF05693_consen 347 VESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLH--DDSND 424 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEET--TTTT-
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCC--CCccC
Confidence 00001111110 11111111 1112111 1111 22345
Q ss_pred HHHHHHHHcCCC-------cEEEecCCCCcc------cHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 330 SYEEKIRRLRLK-------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 330 ~~~~~~~~l~l~-------~V~f~g~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.+-..++++++. .|.|.+.+++.. ++.+++..+|++|+| |.+|+.|.+.+|+.|+|+|.|+|+.
T Consensus 425 pILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFP---SYYEPWGYTPlE~~a~gVPsITTnL 501 (633)
T PF05693_consen 425 PILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFP---SYYEPWGYTPLECTAFGVPSITTNL 501 (633)
T ss_dssp HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE-----SSBSS-HHHHHHHHTT--EEEETT
T ss_pred HHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeec---cccccccCChHHHhhcCCceeeccc
Confidence 666778888772 288888767644 688999999999998 9999999999999999999999998
Q ss_pred Cccccceec-----CCcEEEe
Q 014316 397 SCIEELVKV-----DKNGLLF 412 (427)
Q Consensus 397 ~g~~e~v~~-----~~~G~l~ 412 (427)
+|....+++ ...|+.+
T Consensus 502 sGFG~~~~~~~~~~~~~GV~V 522 (633)
T PF05693_consen 502 SGFGCWMQEHIEDPEEYGVYV 522 (633)
T ss_dssp BHHHHHHHTTS-HHGGGTEEE
T ss_pred hhHHHHHHHhhccCcCCcEEE
Confidence 887655542 4568877
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-09 Score=108.51 Aligned_cols=113 Identities=12% Similarity=0.137 Sum_probs=93.6
Q ss_pred HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-hHHHHHHHHHcCCCc-EEEecCCCC
Q 014316 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRLKR-VAFRTMWLS 351 (427)
Q Consensus 274 ~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~-~~~~~~~~~~l~l~~-V~f~g~~~~ 351 (427)
...|++++.+.+. .|+++|.| |.+.. .+.+.++ .++ +| +.+.| ..
T Consensus 291 s~~I~~i~~Lv~~---------------------------lPd~~f~I-ga~te~s~kL~~L-~~y--~nvvly~~--~~ 337 (438)
T TIGR02919 291 SDQIEHLEEIVQA---------------------------LPDYHFHI-AALTEMSSKLMSL-DKY--DNVKLYPN--IT 337 (438)
T ss_pred HHHHHHHHHHHHh---------------------------CCCcEEEE-EecCcccHHHHHH-Hhc--CCcEEECC--cC
Confidence 8899999999987 99999999 87765 5777777 655 66 55555 45
Q ss_pred cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 352 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
.+++.++|..||+++.. |.+|++++.+.||++.|+||++.+.. |..+++.+ |.++ +++++++++|.++
T Consensus 338 ~~~l~~ly~~~dlyLdi---n~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~l 408 (438)
T TIGR02919 338 TQKIQELYQTCDIYLDI---NHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDL 408 (438)
T ss_pred hHHHHHHHHhccEEEEc---cccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHH
Confidence 66899999999999986 88899999999999999999999844 55677755 7777 7789999998765
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.2e-08 Score=97.64 Aligned_cols=117 Identities=21% Similarity=0.301 Sum_probs=83.8
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
+.+.+++|.|..... .++++++. .++..++++|.+....
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~-------------------------------~~~~~~~v~g~~~~~~------ 229 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKA-------------------------------LPDYQFIVFGPNAADP------ 229 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHh-------------------------------CCCCeEEEEcCCcccc------
Confidence 345688999887655 66677666 4578888887652111
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc------ccceecCCcE
Q 014316 336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI------EELVKVDKNG 409 (427)
Q Consensus 336 ~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~------~e~v~~~~~G 409 (427)
..+||++.++ +.+++.+++..||++|.- ...+ ++.|++++|+|+|.-...+. .+.+++...|
T Consensus 230 ---~~~ni~~~~~--~~~~~~~~m~~ad~vIs~--~G~~-----t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~ 297 (318)
T PF13528_consen 230 ---RPGNIHVRPF--STPDFAELMAAADLVISK--GGYT-----TISEALALGKPALVIPRPGQDEQEYNARKLEELGLG 297 (318)
T ss_pred ---cCCCEEEeec--ChHHHHHHHHhCCEEEEC--CCHH-----HHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCe
Confidence 1358999886 458999999999999962 1221 59999999999999987553 3355566667
Q ss_pred EEeC----ChHHHHHHHHHh
Q 014316 410 LLFS----SSSELADQLLVN 425 (427)
Q Consensus 410 ~l~~----~~~~la~~l~~~ 425 (427)
..++ +++.|++.|+++
T Consensus 298 ~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 298 IVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EEcccccCCHHHHHHHHhcC
Confidence 6653 578999998764
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.4e-07 Score=87.37 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=73.6
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKIR 336 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~~~~~~ 336 (427)
+.++++.|...+.+....+++++..+.. ..++. +++|.+ +..+++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~----------------------------~~~i~-vv~G~~~~~~~~l~~~~~ 221 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQI----------------------------NISIT-LVTGSSNPNLDELKKFAK 221 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcccc----------------------------CceEE-EEECCCCcCHHHHHHHHH
Confidence 4578888887776656777887776421 11233 477866 56677777776
Q ss_pred HcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 337 ~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.. .++++.++ .+++.+++.+||++|.. -|.+++|++++|+|+|+....
T Consensus 222 ~~--~~i~~~~~---~~~m~~lm~~aDl~Is~--------~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 222 EY--PNIILFID---VENMAELMNEADLAIGA--------AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred hC--CCEEEEeC---HHHHHHHHHHCCEEEEC--------CchHHHHHHHcCCCEEEEEec
Confidence 64 48999888 89999999999999963 456899999999999987653
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.3e-07 Score=92.58 Aligned_cols=74 Identities=18% Similarity=0.139 Sum_probs=53.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEeC---
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS--- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~~--- 413 (427)
+||.+.+. ++ ..+++..||++|. ++ | ..++.|++++|+|+|.....+ ..+.+.+...|...+
T Consensus 288 ~~v~~~~~-~p---~~~ll~~~d~~I~-----hg-G-~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 288 DNVRVVDF-VP---HDWLLPRCAAVVH-----HG-G-AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CceEEeCC-CC---HHHHhhhhheeee-----cC-C-chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 58999886 65 4567899999994 22 1 248999999999999997554 344455556676662
Q ss_pred -ChHHHHHHHHHh
Q 014316 414 -SSSELADQLLVN 425 (427)
Q Consensus 414 -~~~~la~~l~~~ 425 (427)
+.+++++++.++
T Consensus 357 ~~~~~l~~al~~~ 369 (401)
T cd03784 357 LTAERLAAALRRL 369 (401)
T ss_pred CCHHHHHHHHHHH
Confidence 568888888765
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.8e-06 Score=94.52 Aligned_cols=132 Identities=16% Similarity=0.063 Sum_probs=101.2
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-Ch---H
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DK---E 329 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~---~ 329 (427)
.++. ++|+++.|+..+|+.+.++..+..+.+.... ....+.|++.|++. .. .
T Consensus 475 dpd~-ltigfarRfa~YKR~~Lil~dl~rl~~il~~-----------------------~~~pvQ~IfaGKAhP~d~~gK 530 (778)
T cd04299 475 DPNV-LTIGFARRFATYKRATLLLRDPERLKRLLND-----------------------PERPVQFIFAGKAHPADEPGK 530 (778)
T ss_pred CCCc-cEEeeeecchhhhhHHHHHHHHHHHHHHhhC-----------------------CCCCeEEEEEEecCccchHHH
Confidence 3443 4899999999999999999998888653100 01248999999874 11 1
Q ss_pred ----HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 330 ----SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 330 ----~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
.+.+++++... .+|.|+-. .+.+-...++++||+.++| |. .|.+|+.-+=||..|.+-+++..|-..|.
T Consensus 531 ~iIk~i~~~a~~p~~~~kVvfle~-Yd~~lA~~LvaG~DvwLn~---prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~ 606 (778)
T cd04299 531 ELIQEIVEFSRRPEFRGRIVFLED-YDMALARHLVQGVDVWLNT---PRRPLEASGTSGMKAALNGGLNLSVLDGWWDEG 606 (778)
T ss_pred HHHHHHHHHHhCcCCCCcEEEEcC-CCHHHHHHHHhhhhhcccC---CCCCCCCCccchHHHHHcCCeeeecccCccccc
Confidence 22333332233 37888776 6777888999999999997 55 59999999999999999999999999998
Q ss_pred eecCCcEEEeCC
Q 014316 403 VKVDKNGLLFSS 414 (427)
Q Consensus 403 v~~~~~G~l~~~ 414 (427)
. ++.||+.+++
T Consensus 607 ~-~g~nGwaig~ 617 (778)
T cd04299 607 Y-DGENGWAIGD 617 (778)
T ss_pred c-CCCCceEeCC
Confidence 8 8999999944
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.9e-05 Score=75.58 Aligned_cols=309 Identities=17% Similarity=0.153 Sum_probs=181.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCC--CcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSK--PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~--~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
.+-++..+.|-.--..-...+|.++ .+..+.+.|..... ...+.. .+.+.+.++|.. + + ....+
T Consensus 51 ~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~-~~~v~h~YlP~D------~---~---~~v~r 117 (419)
T COG1519 51 LVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALF-GDSVIHQYLPLD------L---P---IAVRR 117 (419)
T ss_pred eEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHc-CCCeEEEecCcC------c---h---HHHHH
Confidence 4445555566544555566666665 45677666644322 111122 224777777721 1 1 12233
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
++.. .+||+++.-....++.++ .-++.+++|.++- ..- -+ . ++..-++..+.+.+.+
T Consensus 118 Fl~~------------~~P~l~Ii~EtElWPnli---~e~~~~~~p~~Lv-NaR-LS-----~-rS~~~y~k~~~~~~~~ 174 (419)
T COG1519 118 FLRK------------WRPKLLIIMETELWPNLI---NELKRRGIPLVLV-NAR-LS-----D-RSFARYAKLKFLARLL 174 (419)
T ss_pred HHHh------------cCCCEEEEEeccccHHHH---HHHHHcCCCEEEE-eee-ec-----h-hhhHHHHHHHHHHHHH
Confidence 3333 799998888755555544 4456679997652 110 00 0 1111123335566667
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCe-EEEecCCCCCCcCCCChHH---HHHHHhhhhhcccCCCCccccccCCCCCCCcc
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEE---KHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (427)
.+..|.|++-|+.+++.+.+- |.+ +.+.-|- .+.....+.. ...+..
T Consensus 175 ~~~i~li~aQse~D~~Rf~~L-Ga~~v~v~GNl--Kfd~~~~~~~~~~~~~~r~-------------------------- 225 (419)
T COG1519 175 FKNIDLILAQSEEDAQRFRSL-GAKPVVVTGNL--KFDIEPPPQLAAELAALRR-------------------------- 225 (419)
T ss_pred HHhcceeeecCHHHHHHHHhc-CCcceEEecce--eecCCCChhhHHHHHHHHH--------------------------
Confidence 788999999999999999774 555 4444443 2221111111 111111
Q ss_pred chhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE
Q 014316 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (427)
.....++ +++..+... ..-+.++++++.++++ +|+..+
T Consensus 226 ------------~l~~~r~-v~iaaSTH~--GEeei~l~~~~~l~~~---------------------------~~~~ll 263 (419)
T COG1519 226 ------------QLGGHRP-VWVAASTHE--GEEEIILDAHQALKKQ---------------------------FPNLLL 263 (419)
T ss_pred ------------hcCCCCc-eEEEecCCC--chHHHHHHHHHHHHhh---------------------------CCCceE
Confidence 1222255 555555533 3345689999999987 899999
Q ss_pred EEEeCCCCh-HHHHHHHHHcCCCcEEEecC-CC----------CcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcC
Q 014316 320 IITGKGPDK-ESYEEKIRRLRLKRVAFRTM-WL----------SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 320 ~i~G~G~~~-~~~~~~~~~l~l~~V~f~g~-~~----------~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~ 387 (427)
+++=.-|++ ...++++++.|++-..+... +. +--++..+|+.+|+.++= .|.-.-=|-=++|+.++
T Consensus 264 IlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVG--GSlv~~GGHN~LEpa~~ 341 (419)
T COG1519 264 ILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVG--GSLVPIGGHNPLEPAAF 341 (419)
T ss_pred EEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEEC--CcccCCCCCChhhHHHc
Confidence 999877654 56788888887743332221 00 133788999999999872 22111112248999999
Q ss_pred CCcEEEec----cCccccceecCCcEEEeCChHHHHHHHHH
Q 014316 388 GLPVCAVS----YSCIEELVKVDKNGLLFSSSSELADQLLV 424 (427)
Q Consensus 388 G~PVIas~----~~g~~e~v~~~~~G~l~~~~~~la~~l~~ 424 (427)
|+|||+-. ...+.+-+...+.|+.++|.+.+++.+..
T Consensus 342 ~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~~~~l~~~v~~ 382 (419)
T COG1519 342 GTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADLLAKAVEL 382 (419)
T ss_pred CCCEEeCCccccHHHHHHHHHhcCCeEEECCHHHHHHHHHH
Confidence 99999864 45555666677778888887777766543
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.2e-06 Score=85.47 Aligned_cols=279 Identities=17% Similarity=0.188 Sum_probs=159.8
Q ss_pred EEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEE-EeecCCCCCCCCcchhhHHHHHHHHHHH
Q 014316 9 VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (427)
Q Consensus 9 v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (427)
.++.|+.+|.-.....+.+|.++ .-++.+.+.++.. ..+ .|++.. .+. .....++.-..+.+..+++...+
T Consensus 2 ~i~AGE~SGD~~ga~Li~~Lk~~-~p~~~~~GvGG~~-M~~----~G~~~l~d~~--~lsvmG~~Evl~~l~~~~~~~~~ 73 (373)
T PF02684_consen 2 FISAGEASGDLHGARLIRALKAR-DPDIEFYGVGGPR-MQA----AGVESLFDME--ELSVMGFVEVLKKLPKLKRLFRK 73 (373)
T ss_pred EEEeeCccHHHHHHHHHHHHHhh-CCCcEEEEEechH-HHh----CCCceecchH--HhhhccHHHHHHHHHHHHHHHHH
Confidence 35667777766677777888886 5578888776654 221 243322 111 10011111122223333333333
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCc--EEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc
Q 014316 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (427)
Q Consensus 88 ~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p--~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (427)
+... .+..+||+++.-+.+.+..-+ +..+++ +++| +|+.+---.| . .+..+. +.+.+
T Consensus 74 ~~~~-----~~~~~pd~vIlID~pgFNlrl-ak~lk~-~~~~~~viyYI~PqvW---A---Wr~~R~--------~~i~~ 132 (373)
T PF02684_consen 74 LVER-----IKEEKPDVVILIDYPGFNLRL-AKKLKK-RGIPIKVIYYISPQVW---A---WRPGRA--------KKIKK 132 (373)
T ss_pred HHHH-----HHHcCCCEEEEeCCCCccHHH-HHHHHH-hCCCceEEEEECCcee---e---eCccHH--------HHHHH
Confidence 2211 134899999998877666554 443333 3555 7665432212 1 121211 22335
Q ss_pred cCCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
..|.++|+=....+.+.+ .|.+++.+-|.-.+...+... +.+
T Consensus 133 ~~D~ll~ifPFE~~~y~~-~g~~~~~VGHPl~d~~~~~~~--~~~----------------------------------- 174 (373)
T PF02684_consen 133 YVDHLLVIFPFEPEFYKK-HGVPVTYVGHPLLDEVKPEPD--RAE----------------------------------- 174 (373)
T ss_pred HHhheeECCcccHHHHhc-cCCCeEEECCcchhhhccCCC--HHH-----------------------------------
Confidence 678899988888877765 477777776652222222211 111
Q ss_pred ccccccccCCCCCeEEEEEeec--CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 246 LAGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~~--~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
.++.+ ++++++.+.+.-|+= +-.+.+..++++++.+.++ +|+++|++..
T Consensus 175 -~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~---------------------------~p~l~fvvp~ 225 (373)
T PF02684_consen 175 -AREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ---------------------------RPDLQFVVPV 225 (373)
T ss_pred -HHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEec
Confidence 01112 456666566666652 2335668889999999987 8999999887
Q ss_pred CCCChHH-HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 324 KGPDKES-YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 324 ~G~~~~~-~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.....++ +++..+..+. ++...-. ..+-.+.++.||+.+.. .|.+.+|++.+|+|.|..-
T Consensus 226 a~~~~~~~i~~~~~~~~~-~~~~~~~---~~~~~~~m~~ad~al~~--------SGTaTLE~Al~g~P~Vv~Y 286 (373)
T PF02684_consen 226 APEVHEELIEEILAEYPP-DVSIVII---EGESYDAMAAADAALAA--------SGTATLEAALLGVPMVVAY 286 (373)
T ss_pred CCHHHHHHHHHHHHhhCC-CCeEEEc---CCchHHHHHhCcchhhc--------CCHHHHHHHHhCCCEEEEE
Confidence 6544433 4444444433 2222222 45678899999999874 5679999999999998764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.3e-05 Score=79.56 Aligned_cols=74 Identities=16% Similarity=0.279 Sum_probs=52.3
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccc------ceecCCcEEEeC-
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE------LVKVDKNGLLFS- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e------~v~~~~~G~l~~- 413 (427)
+|+.+.+. .+ +++.+++..||++|+ ..+ . .++.|++++|+|+|.....+..| .+.+.+.|...+
T Consensus 229 ~~v~~~~~-~~-~~~~~~l~~ad~vI~----~~G--~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~ 299 (321)
T TIGR00661 229 ENVEIRRI-TT-DNFKELIKNAELVIT----HGG--F-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY 299 (321)
T ss_pred CCEEEEEC-Ch-HHHHHHHHhCCEEEE----CCC--h-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh
Confidence 58888885 44 789999999999996 222 1 26999999999999998765333 455666777662
Q ss_pred -ChHHHHHHHHH
Q 014316 414 -SSSELADQLLV 424 (427)
Q Consensus 414 -~~~~la~~l~~ 424 (427)
+. ++.+++.+
T Consensus 300 ~~~-~~~~~~~~ 310 (321)
T TIGR00661 300 KEL-RLLEAILD 310 (321)
T ss_pred hhH-HHHHHHHh
Confidence 33 44444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.2e-06 Score=83.39 Aligned_cols=279 Identities=15% Similarity=0.113 Sum_probs=157.0
Q ss_pred EEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 10 ~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
++.|+.+++--......+|-.+-+ +|..++-+++. ..+. |.+...=.. .....++.-.+..+..+++...++.
T Consensus 6 i~AGE~SGDllGa~LikaLk~~~~-~~efvGvgG~~-m~ae----G~~sl~~~~-elsvmGf~EVL~~lp~llk~~~~~~ 78 (381)
T COG0763 6 LSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEK-MEAE----GLESLFDME-ELSVMGFVEVLGRLPRLLKIRRELV 78 (381)
T ss_pred EEecccchhhHHHHHHHHHHhhCC-CeEEEEeccHH-HHhc----cCccccCHH-HHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 356777776666667778777633 88998876644 2111 321111000 0001111112222333333333322
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCC
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN 168 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad 168 (427)
+.+ ...+||++++-+.+.+...+ +..+.+ ...+|+|+.+--..| . .+..+ -..+.+..|
T Consensus 79 ~~i-----~~~kpD~~i~IDsPdFnl~v-ak~lrk~~p~i~iihYV~PsVW---A---Wr~~R--------a~~i~~~~D 138 (381)
T COG0763 79 RYI-----LANKPDVLILIDSPDFNLRV-AKKLRKAGPKIKIIHYVSPSVW---A---WRPKR--------AVKIAKYVD 138 (381)
T ss_pred HHH-----HhcCCCEEEEeCCCCCchHH-HHHHHHhCCCCCeEEEECccee---e---echhh--------HHHHHHHhh
Confidence 211 13899999999877776665 433333 345888775543322 0 01111 122335689
Q ss_pred EEEEcCHHHHHHHHHhhCCeEEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 169 GCLCVTQAMQHELAQNWGIKATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 169 ~vi~vS~~~~~~l~~~~~~~~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
.++++=....+.+.+ .|.+.+.+-+. |...+.+... .
T Consensus 139 ~lLailPFE~~~y~k-~g~~~~yVGHpl~d~i~~~~~r~----~------------------------------------ 177 (381)
T COG0763 139 HLLAILPFEPAFYDK-FGLPCTYVGHPLADEIPLLPDRE----A------------------------------------ 177 (381)
T ss_pred HeeeecCCCHHHHHh-cCCCeEEeCChhhhhccccccHH----H------------------------------------
Confidence 999998888877755 57775555444 3222332221 1
Q ss_pred cccccccCCCCCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 324 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~ 324 (427)
++.+++.+.+.+.+.+.-|+=. -.+-...+.+|+..+.++ +|+.+|++-=-
T Consensus 178 ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~---------------------------~~~~~~vlp~~ 230 (381)
T COG0763 178 AREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR---------------------------YPDLKFVLPLV 230 (381)
T ss_pred HHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhh---------------------------CCCceEEEecC
Confidence 2223355666666666666532 335667788889888876 89999999765
Q ss_pred CCChHHHHHHHH-HcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 325 GPDKESYEEKIR-RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 325 G~~~~~~~~~~~-~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.+..+.+++... ..... ... ++...+-.+.+.+||+.+.. .|.+.+|+|.+|+|.|.+-
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~a~~~aD~al~a--------SGT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 231 NAKYRRIIEEALKWEVAG-LSL---ILIDGEKRKAFAAADAALAA--------SGTATLEAALAGTPMVVAY 290 (381)
T ss_pred cHHHHHHHHHHhhccccC-ceE---EecCchHHHHHHHhhHHHHh--------ccHHHHHHHHhCCCEEEEE
Confidence 543333332222 21111 112 13356778899999999864 6779999999999999764
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.7e-05 Score=80.79 Aligned_cols=92 Identities=18% Similarity=0.263 Sum_probs=59.8
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.++.+|.+.+.+.++ .+ -++|.+.+. ++. .+++..||++|.- .+ . .++.||+++|+|+|.....
T Consensus 257 ~i~~~g~~~~~~~~~----~~-~~~v~~~~~-~p~---~~ll~~~~~~I~h----gG--~-~t~~Eal~~G~P~v~~p~~ 320 (392)
T TIGR01426 257 VVLSVGRGVDPADLG----EL-PPNVEVRQW-VPQ---LEILKKADAFITH----GG--M-NSTMEALFNGVPMVAVPQG 320 (392)
T ss_pred EEEEECCCCChhHhc----cC-CCCeEEeCC-CCH---HHHHhhCCEEEEC----CC--c-hHHHHHHHhCCCEEecCCc
Confidence 345567665433322 11 257888875 765 4778999999852 11 1 2799999999999997644
Q ss_pred c----cccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 398 C----IEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 398 g----~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+ ..+.+.+...|..+. +.++++++|+++
T Consensus 321 ~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~ 356 (392)
T TIGR01426 321 ADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAV 356 (392)
T ss_pred ccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHH
Confidence 3 233455556776662 357888888765
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-05 Score=80.68 Aligned_cols=240 Identities=19% Similarity=0.175 Sum_probs=127.0
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+|+++. .....+.+.+++...++| |.++|+-..+ .....++ .-....+.+.+.||..+|.|+..+
T Consensus 65 ~~~Pd~Vlv~G--D~~~~la~alaA~~~~ip-v~HieaGlRs-----~d~~~g~--~de~~R~~i~~la~lhf~~t~~~~ 134 (346)
T PF02350_consen 65 REKPDAVLVLG--DRNEALAAALAAFYLNIP-VAHIEAGLRS-----GDRTEGM--PDEINRHAIDKLAHLHFAPTEEAR 134 (346)
T ss_dssp HHT-SEEEEET--TSHHHHHHHHHHHHTT-E-EEEES----------S-TTSST--THHHHHHHHHHH-SEEEESSHHHH
T ss_pred hcCCCEEEEEc--CCchHHHHHHHHHHhCCC-EEEecCCCCc-----cccCCCC--chhhhhhhhhhhhhhhccCCHHHH
Confidence 37999999997 344455578888899999 6666644110 0111111 012223456678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.++-|.-.+.+ +..... . ...+. ...+....
T Consensus 135 ~~L~~~-G~~~~rI~~vG~~~~D~l-----------~~~~~~-~--------------------~~~~~---~~~i~~~~ 178 (346)
T PF02350_consen 135 ERLLQE-GEPPERIFVVGNPGIDAL-----------LQNKEE-I--------------------EEKYK---NSGILQDA 178 (346)
T ss_dssp HHHHHT-T--GGGEEE---HHHHHH-----------HHHHHT-T--------------------CC-HH---HHHHHHCT
T ss_pred HHHHhc-CCCCCeEEEEChHHHHHH-----------HHhHHH-H--------------------hhhhh---hHHHHhcc
Confidence 999876 553 555543211111 000000 0 00000 00000123
Q ss_pred CCCeEEEEEeecCC---CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC--CChHH
Q 014316 256 NRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG--PDKES 330 (427)
Q Consensus 256 ~~~~~i~~~g~~~~---~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G--~~~~~ 330 (427)
.++.+++..=+.+. .+....+.++++.+.+. +++.+++.... .....
T Consensus 179 ~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~----------------------------~~~~vi~~~hn~p~~~~~ 230 (346)
T PF02350_consen 179 PKPYILVTLHPVTNEDNPERLEQILEALKALAER----------------------------QNVPVIFPLHNNPRGSDI 230 (346)
T ss_dssp TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH----------------------------TTEEEEEE--S-HHHHHH
T ss_pred CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc----------------------------CCCcEEEEecCCchHHHH
Confidence 34445555433222 34566777777777763 56888777752 22334
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHH-HHHcCCCcEEEec-cCccccceecCCc
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV-DMFGCGLPVCAVS-YSCIEELVKVDKN 408 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~l-Eama~G~PVIas~-~~g~~e~v~~~~~ 408 (427)
+.+.++++ +++.+... ++..++..+++.|+++|- .|++ +. ||..+|+|||.-. .|.-.+.+..+.+
T Consensus 231 i~~~l~~~--~~v~~~~~-l~~~~~l~ll~~a~~vvg---dSsG------I~eEa~~lg~P~v~iR~~geRqe~r~~~~n 298 (346)
T PF02350_consen 231 IIEKLKKY--DNVRLIEP-LGYEEYLSLLKNADLVVG---DSSG------IQEEAPSLGKPVVNIRDSGERQEGRERGSN 298 (346)
T ss_dssp HHHHHTT---TTEEEE-----HHHHHHHHHHESEEEE---SSHH------HHHHGGGGT--EEECSSS-S-HHHHHTTSE
T ss_pred HHHHhccc--CCEEEECC-CCHHHHHHHHhcceEEEE---cCcc------HHHHHHHhCCeEEEecCCCCCHHHHhhcce
Confidence 44444444 48999998 999999999999999985 1223 56 9999999999996 5555666555555
Q ss_pred EEEe-CChHHHHHHHHHh
Q 014316 409 GLLF-SSSSELADQLLVN 425 (427)
Q Consensus 409 G~l~-~~~~~la~~l~~~ 425 (427)
-+ + .+.+++.+++.++
T Consensus 299 vl-v~~~~~~I~~ai~~~ 315 (346)
T PF02350_consen 299 VL-VGTDPEAIIQAIEKA 315 (346)
T ss_dssp EE-ETSSHHHHHHHHHHH
T ss_pred EE-eCCCHHHHHHHHHHH
Confidence 45 7 6677777777654
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.1e-05 Score=76.41 Aligned_cols=276 Identities=17% Similarity=0.130 Sum_probs=147.6
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 014316 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (427)
Q Consensus 23 ~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (427)
..+..|-++ ||+|.|.|-..+. ..+..+..|+++..+. ... -....+.+ ..+.+..+++.. .+..+|
T Consensus 18 ~~I~eL~~~-GheV~it~R~~~~-~~~LL~~yg~~y~~iG--~~g---~~~~~Kl~----~~~~R~~~l~~~--~~~~~p 84 (335)
T PF04007_consen 18 NIIRELEKR-GHEVLITARDKDE-TEELLDLYGIDYIVIG--KHG---DSLYGKLL----ESIERQYKLLKL--IKKFKP 84 (335)
T ss_pred HHHHHHHhC-CCEEEEEEeccch-HHHHHHHcCCCeEEEc--CCC---CCHHHHHH----HHHHHHHHHHHH--HHhhCC
Confidence 345677775 9999999976543 5667777899999887 211 11112211 122222222222 123799
Q ss_pred cEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHH
Q 014316 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (427)
Q Consensus 103 Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~ 182 (427)
|++++++ . .-+..+++..|+|.|.-..+- ... ...++....||.+++..-.-...+
T Consensus 85 Dv~is~~---s---~~a~~va~~lgiP~I~f~D~e-~a~----------------~~~~Lt~Pla~~i~~P~~~~~~~~- 140 (335)
T PF04007_consen 85 DVAISFG---S---PEAARVAFGLGIPSIVFNDTE-HAI----------------AQNRLTLPLADVIITPEAIPKEFL- 140 (335)
T ss_pred CEEEecC---c---HHHHHHHHHhCCCeEEEecCc-hhh----------------ccceeehhcCCeeECCcccCHHHH-
Confidence 9999886 1 114457788899988754432 210 012334457898887755444333
Q ss_pred HhhCCeEEEe-cCC-C-CCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCe
Q 014316 183 QNWGIKATVL-YDQ-P-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (427)
Q Consensus 183 ~~~~~~~~vi-~n~-~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (427)
.++|.+-.+. +|| . ....++..++ .+.+.+ +++. +.+.
T Consensus 141 ~~~G~~~~i~~y~G~~E~ayl~~F~Pd--~~vl~~------------------------------------lg~~-~~~y 181 (335)
T PF04007_consen 141 KRFGAKNQIRTYNGYKELAYLHPFKPD--PEVLKE------------------------------------LGLD-DEPY 181 (335)
T ss_pred HhcCCcCCEEEECCeeeEEeecCCCCC--hhHHHH------------------------------------cCCC-CCCE
Confidence 3456553344 777 2 2222222111 122222 2322 2342
Q ss_pred EEEEEeecCCCCC------HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 260 LVVSSTSWTPDED------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 260 ~i~~~g~~~~~K~------~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
+++ |+.+++- -..+-+.+..+.+. .+. ++++-..+... +
T Consensus 182 Ivv---R~~~~~A~y~~~~~~i~~~ii~~L~~~----------------------------~~~-vV~ipr~~~~~---~ 226 (335)
T PF04007_consen 182 IVV---RPEAWKASYDNGKKSILPEIIEELEKY----------------------------GRN-VVIIPRYEDQR---E 226 (335)
T ss_pred EEE---EeccccCeeecCccchHHHHHHHHHhh----------------------------Cce-EEEecCCcchh---h
Confidence 332 3333221 12344555555553 333 44444332222 2
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC---ccccceecCCcEE
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS---CIEELVKVDKNGL 410 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~---g~~e~v~~~~~G~ 410 (427)
+.++.+ +.+... .-+...++.-||++|- . -|.-..||-..|+|.|++..| ++.+.+.+ .|+
T Consensus 227 ~~~~~~---~~i~~~---~vd~~~Ll~~a~l~Ig-----~---ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gl 290 (335)
T PF04007_consen 227 LFEKYG---VIIPPE---PVDGLDLLYYADLVIG-----G---GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGL 290 (335)
T ss_pred HHhccC---ccccCC---CCCHHHHHHhcCEEEe-----C---CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCC
Confidence 333332 444333 3355689999999994 2 245689999999999998644 33344433 466
Q ss_pred Ee--CChHHHHHHHHHh
Q 014316 411 LF--SSSSELADQLLVN 425 (427)
Q Consensus 411 l~--~~~~~la~~l~~~ 425 (427)
++ .|++++.+.+.++
T Consensus 291 l~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 291 LYHSTDPDEIVEYVRKN 307 (335)
T ss_pred eEecCCHHHHHHHHHHh
Confidence 66 7788888876554
|
They are found in archaea and some bacteria and have no known function. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.33 E-value=7.8e-07 Score=71.53 Aligned_cols=54 Identities=19% Similarity=0.348 Sum_probs=49.7
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
+...+++++++|+||||+|+|+++.++..+++.++..++.+++++++++++..+
T Consensus 6 ~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~l 59 (92)
T PF13524_consen 6 SRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYL 59 (92)
T ss_pred CCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHH
Confidence 444779999999999999999999999999999999999999999999998875
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.31 E-value=8.2e-05 Score=78.82 Aligned_cols=275 Identities=12% Similarity=0.063 Sum_probs=145.6
Q ss_pred EEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEE-EeecCCCCCCCCcchhhHHHHHHHHHHHH
Q 014316 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (427)
Q Consensus 10 ~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (427)
++.|+.+|.-.....+.+|.++ .-++.+.+.+++. ..+ .|++.. .+. .....++--..+.+..+++...++
T Consensus 231 I~AGE~SGDlhgA~Li~aLk~~-~P~i~~~GvGG~~-M~a----aG~e~l~d~~--eLsVmG~~EVL~~l~~l~~~~~~l 302 (608)
T PRK01021 231 ISAGEHSGDTLGGNLLKEIKAL-YPDIHCFGVGGPQ-MRA----EGFHPLFNME--EFQVSGFWEVLLALFKLWYRYRKL 302 (608)
T ss_pred EEeccccHHHHHHHHHHHHHhc-CCCcEEEEEccHH-HHh----CcCcccCChH--HhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567776655556666777765 4467777665543 111 133211 011 000011111122222233333322
Q ss_pred HHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCC--cEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhcc
Q 014316 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRS--AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKM 166 (427)
Q Consensus 89 ~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~--p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 166 (427)
.+. + +..+||+++.-+.|.+..-+ +..+++ .|+ |+|+.+---.| . .+..+. +.+.+.
T Consensus 303 ~~~----i-~~~kPD~vIlID~PgFNlrL-AK~lkk-~Gi~ipviyYVsPqVW---A---WR~~Ri--------kki~k~ 361 (608)
T PRK01021 303 YKT----I-LKTNPRTVICIDFPDFHFLL-IKKLRK-RGYKGKIVHYVCPSIW---A---WRPKRK--------TILEKY 361 (608)
T ss_pred HHH----H-HhcCCCEEEEeCCCCCCHHH-HHHHHh-cCCCCCEEEEECccce---e---eCcchH--------HHHHHH
Confidence 111 1 23799999998867666554 554444 464 88775432222 1 122222 223356
Q ss_pred CCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 167 ANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 167 ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
.|.++|+=....+.+++ .|.+++.+-|.-.+...... .+.+..
T Consensus 362 vD~ll~IfPFE~~~y~~-~gv~v~yVGHPL~d~i~~~~--~~~~~r---------------------------------- 404 (608)
T PRK01021 362 LDLLLLILPFEQNLFKD-SPLRTVYLGHPLVETISSFS--PNLSWK---------------------------------- 404 (608)
T ss_pred hhhheecCccCHHHHHh-cCCCeEEECCcHHhhcccCC--CHHHHH----------------------------------
Confidence 78899998888887765 58887777665112221111 111111
Q ss_pred cccccccCCCCCeEEEEEeec--CCCCCHHHHHHHHH--hhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE
Q 014316 247 AGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEAAL--MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 322 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~--~~~K~~~~Li~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 322 (427)
++++.+++.+.+-+.-|+= +-.+.+..+++|++ .+ .++.+|++.
T Consensus 405 --~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l------------------------------~~~l~fvvp 452 (608)
T PRK01021 405 --EQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSL------------------------------ASTHQLLVS 452 (608)
T ss_pred --HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHh------------------------------ccCeEEEEe
Confidence 1224455556555665642 23355677777776 32 235778775
Q ss_pred eCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 323 GKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 323 G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
...+ ..+.+++..+..++-.+.+.. .++-.+++++||+.+.. .|.+.+|++.+|+|.|..
T Consensus 453 ~a~~~~~~~i~~~~~~~~~~~~~ii~----~~~~~~~m~aaD~aLaa--------SGTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 453 SANPKYDHLILEVLQQEGCLHSHIVP----SQFRYELMRECDCALAK--------CGTIVLETALNQTPTIVT 513 (608)
T ss_pred cCchhhHHHHHHHHhhcCCCCeEEec----CcchHHHHHhcCeeeec--------CCHHHHHHHHhCCCEEEE
Confidence 4332 234556555443321334432 22347999999999974 677999999999999975
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0021 Score=63.50 Aligned_cols=75 Identities=24% Similarity=0.415 Sum_probs=52.5
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--cccceec---CCcE---EEe
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKV---DKNG---LLF 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g--~~e~v~~---~~~G---~l~ 412 (427)
.+|+..-+ .+++..++++|+..|.- ..+ +++.|-+.+|+|.+....+. -.++++- .+-| ++-
T Consensus 277 p~i~I~~f---~~~~~~ll~gA~~vVSm--~GY-----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~ 346 (400)
T COG4671 277 PHISIFEF---RNDFESLLAGARLVVSM--GGY-----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLL 346 (400)
T ss_pred CCeEEEEh---hhhHHHHHHhhheeeec--ccc-----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeC
Confidence 57999999 99999999999999952 233 37999999999999887433 3333321 1223 333
Q ss_pred -C--ChHHHHHHHHHh
Q 014316 413 -S--SSSELADQLLVN 425 (427)
Q Consensus 413 -~--~~~~la~~l~~~ 425 (427)
+ +++.||++|..+
T Consensus 347 pe~lt~~~La~al~~~ 362 (400)
T COG4671 347 PENLTPQNLADALKAA 362 (400)
T ss_pred cccCChHHHHHHHHhc
Confidence 2 368888887653
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0016 Score=65.34 Aligned_cols=240 Identities=17% Similarity=0.137 Sum_probs=144.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+|.+|. ...+.+.+.+++...++|+-.---+. .+ .+.. .-..+. .+.....||..++.|+..++
T Consensus 91 ~kPD~VlVhG--DT~t~lA~alaa~~~~IpV~HvEAGl-Rt-----~~~~-~PEE~N---R~l~~~~S~~hfapte~ar~ 158 (383)
T COG0381 91 EKPDLVLVHG--DTNTTLAGALAAFYLKIPVGHVEAGL-RT-----GDLY-FPEEIN---RRLTSHLSDLHFAPTEIARK 158 (383)
T ss_pred hCCCEEEEeC--CcchHHHHHHHHHHhCCceEEEeccc-cc-----CCCC-CcHHHH---HHHHHHhhhhhcCChHHHHH
Confidence 8999999998 34555556888999999965432222 10 1111 001111 23456679999999999999
Q ss_pred HHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
+|.+. |.+ +.++-|...+.+.........+ .. .. ..+....+
T Consensus 159 nLl~E-G~~~~~IfvtGnt~iDal~~~~~~~~~~-----------------------------~~-~~----~~~~~~~~ 203 (383)
T COG0381 159 NLLRE-GVPEKRIFVTGNTVIDALLNTRDRVLED-----------------------------SK-IL----AKGLDDKD 203 (383)
T ss_pred HHHHc-CCCccceEEeCChHHHHHHHHHhhhccc-----------------------------hh-hH----Hhhhcccc
Confidence 99876 443 6666665222221110000000 00 00 00011233
Q ss_pred CCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 257 RPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 257 ~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
+..+++..=|-+ ..+++..+++|+.++.+. ++++.++.-=.-. ..+++..
T Consensus 204 ~~~iLvT~HRreN~~~~~~~i~~al~~i~~~---------------------------~~~~~viyp~H~~--~~v~e~~ 254 (383)
T COG0381 204 KKYILVTAHRRENVGEPLEEICEALREIAEE---------------------------YPDVIVIYPVHPR--PRVRELV 254 (383)
T ss_pred CcEEEEEcchhhcccccHHHHHHHHHHHHHh---------------------------CCCceEEEeCCCC--hhhhHHH
Confidence 344555554444 338999999999999887 6777666644322 4555555
Q ss_pred -HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCcEEEe
Q 014316 336 -RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLLF 412 (427)
Q Consensus 336 -~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~G~l~ 412 (427)
+.|+- ++|.+... +...+...+++.|-+.+- .|.+ -.=||-..|+||++-+ ...-+|.++-|.+ .++
T Consensus 255 ~~~L~~~~~v~li~p-l~~~~f~~L~~~a~~ilt---DSGg-----iqEEAp~lg~Pvl~lR~~TERPE~v~agt~-~lv 324 (383)
T COG0381 255 LKRLKNVERVKLIDP-LGYLDFHNLMKNAFLILT---DSGG-----IQEEAPSLGKPVLVLRDTTERPEGVEAGTN-ILV 324 (383)
T ss_pred HHHhCCCCcEEEeCC-cchHHHHHHHHhceEEEe---cCCc-----hhhhHHhcCCcEEeeccCCCCccceecCce-EEe
Confidence 45554 47999888 889999999999866552 3333 5779999999999998 4466776754444 455
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
.+.+.+.+++..+
T Consensus 325 g~~~~~i~~~~~~l 338 (383)
T COG0381 325 GTDEENILDAATEL 338 (383)
T ss_pred CccHHHHHHHHHHH
Confidence 4556666665443
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00088 Score=70.08 Aligned_cols=262 Identities=14% Similarity=0.082 Sum_probs=131.7
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
...-|+|-+|+ +...++..++.. ..+.++-+.+|-...+...++. -++ ...+-+-+. .||.|=+-+...
T Consensus 139 ~~~~D~VWVhD---YhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~---lP~---r~eiL~glL-~aDlIgFqt~~~ 208 (474)
T PF00982_consen 139 YRPGDLVWVHD---YHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRC---LPW---REEILRGLL-GADLIGFQTFEY 208 (474)
T ss_dssp --TT-EEEEES---GGGTTHHHHHHHTT--SEEEEEE-S----HHHHTT---STT---HHHHHHHHT-TSSEEEESSHHH
T ss_pred CcCCCEEEEeC---CcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhh---CCc---HHHHHHHhh-cCCEEEEecHHH
Confidence 35789999999 555554555544 4577888888876221111111 111 122222222 589999999988
Q ss_pred HHHHHHh----hCCe-----EEEecCC-C--CCCcCC-CChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhh
Q 014316 178 QHELAQN----WGIK-----ATVLYDQ-P--PEFFHP-TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT 244 (427)
Q Consensus 178 ~~~l~~~----~~~~-----~~vi~n~-~--~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (427)
.+.+... +|.. -.+.++| . ...|+. ++.+. |.+.... .........+
T Consensus 209 ~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~----~~~~~~~---------------~~v~~~~~~l- 268 (474)
T PF00982_consen 209 ARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDA----FAQLARS---------------PEVQERAEEL- 268 (474)
T ss_dssp HHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHH----HHHHHH----------------S---HHHHHH-
T ss_pred HHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHH----HHhhccC---------------hHHHHHHHHH-
Confidence 8876432 3332 1344555 1 111111 11111 1111000 0000000011
Q ss_pred cccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC
Q 014316 245 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 324 (427)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~ 324 (427)
+.+ -.++..+|+.+.|+...||+..=+.|+..+.++++.- ..++.|+-++-
T Consensus 269 ---~~~---~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~-----------------------~~kv~liQi~~ 319 (474)
T PF00982_consen 269 ---REK---FKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEY-----------------------RGKVVLIQIAV 319 (474)
T ss_dssp ---HHH---TTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGG-----------------------TTTEEEEEE--
T ss_pred ---HHh---cCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCc-----------------------cCcEEEEEEee
Confidence 111 1222358999999999999999999999998873221 33577776763
Q ss_pred CC--C-------hHHHHHHHHHc----CCC---cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 325 GP--D-------KESYEEKIRRL----RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 325 G~--~-------~~~~~~~~~~l----~l~---~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
.. + ++++++++.+. |-. -|.++..-++.+++.++|+.||+++.. |.++|.-++..|+.+|.
T Consensus 320 psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvT---slrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 320 PSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVT---SLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE-----SSBS--HHHHHHHHHS
T ss_pred ccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEec---chhhccCCcceEEEEEe
Confidence 21 1 13344444432 322 266665558999999999999999985 88899999999999997
Q ss_pred Cc----EEEeccCccccceecCCcEEEeC--ChHHHHHHHHH
Q 014316 389 LP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLV 424 (427)
Q Consensus 389 ~P----VIas~~~g~~e~v~~~~~G~l~~--~~~~la~~l~~ 424 (427)
.. +|.|...|..+.+.+ ..++++ |.+++|++|.+
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~--~al~VNP~d~~~~A~ai~~ 436 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSE--AALLVNPWDIEEVADAIHE 436 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHH
T ss_pred cCCCCceEeeccCCHHHHcCC--ccEEECCCChHHHHHHHHH
Confidence 75 777787777777732 237774 57899998875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0011 Score=69.02 Aligned_cols=137 Identities=7% Similarity=0.041 Sum_probs=99.9
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC---------ChH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP---------DKE 329 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~---------~~~ 329 (427)
.+|+.+.|+..-||+..=++|+..+.++++.- ..++.|+-+.-.. .+.
T Consensus 256 ~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~-----------------------~gkvvlvQia~psR~~v~~Y~~l~~ 312 (474)
T PRK10117 256 QNIFSVERLDYSKGLPERFLAYEALLEKYPQH-----------------------HGKIRYTQIAPTSRGDVQAYQDIRH 312 (474)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHhChhh-----------------------cCCEEEEEEcCCCCCccHHHHHHHH
Confidence 48999999999999999999999988872111 2246676665321 122
Q ss_pred HHHHHHHHcC----C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC-----cEEEeccC
Q 014316 330 SYEEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVCAVSYS 397 (427)
Q Consensus 330 ~~~~~~~~l~----l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~-----PVIas~~~ 397 (427)
++++++.+.+ - + -|.++..-++.+++.++|+.||+++.. |.++|.=++..||.||-. ..|.|...
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVT---plRDGMNLVAkEyva~q~~~~~GvLILSefA 389 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLVLSQFA 389 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEec---ccccccccccchheeeecCCCCccEEEeccc
Confidence 3444444432 1 1 277766558899999999999999985 777888889999999965 37888877
Q ss_pred ccccceecCCcEEEeC--ChHHHHHHHHH
Q 014316 398 CIEELVKVDKNGLLFS--SSSELADQLLV 424 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~--~~~~la~~l~~ 424 (427)
|.++.+. ..++++ |.+++|++|..
T Consensus 390 GaA~~L~---~AllVNP~d~~~~A~Ai~~ 415 (474)
T PRK10117 390 GAANELT---SALIVNPYDRDEVAAALDR 415 (474)
T ss_pred chHHHhC---CCeEECCCCHHHHHHHHHH
Confidence 7777773 367774 57899988865
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0016 Score=63.53 Aligned_cols=229 Identities=16% Similarity=0.163 Sum_probs=130.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+.+=++.|+-.. +.++++.+..+.+ +.-+.||=|+-.+... ..+...+++..+.+...++..+|++ ++.+..
T Consensus 38 ~r~~rff~HGqFn-~~lwlall~g~~~--~~q~yWhiWGaDLYe~---~~~lk~rlfy~lRR~aq~rvg~v~a-trGD~~ 110 (322)
T PRK02797 38 NRAQRFFLHGQFN-PTLWLALLSGKIK--PKQFYWHIWGADLYEE---SKGLKFRLFYPLRRLAQKRVGHVFA-TRGDLS 110 (322)
T ss_pred CccceEEEecCCC-HHHHHHHHhCCcC--ccceEEEEEChhhhhc---ccchhHHHHHHHHHHHHhhcCeEEE-ecchHH
Confidence 6677777887322 3333333333222 2244577665444311 2333356777888888899999999 777777
Q ss_pred HHH-HhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCC
Q 014316 180 ELA-QNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (427)
Q Consensus 180 ~l~-~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (427)
++. +.++.+...+| .|+.....-.. ..-...++.+
T Consensus 111 ~~a~~~~~v~~~lly-------fpt~m~~~l~~-------------------------------------~~~~~~~~~~ 146 (322)
T PRK02797 111 YFAQRHPKVPGSLLY-------FPTRMDPSLNT-------------------------------------MANDRQRAGK 146 (322)
T ss_pred HHHHhcCCCCccEEe-------cCCcchhhhcc-------------------------------------ccccccCCCc
Confidence 754 44444433222 22211100000 0000112233
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eC--CC--ChHHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GK--GP--DKESYEE 333 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~--G~--~~~~~~~ 333 (427)
+.|+.-.+-.+.-++..++++++... ..++++++. |- |. +.+++++
T Consensus 147 ~tIlvGNSgd~SN~Hie~L~~l~~~~-----------------------------~~~v~ii~PlsYp~gn~~Yi~~V~~ 197 (322)
T PRK02797 147 MTILVGNSGDRSNRHIEALRALHQQF-----------------------------GDNVKIIVPMGYPANNQAYIEEVRQ 197 (322)
T ss_pred eEEEEeCCCCCcccHHHHHHHHHHHh-----------------------------CCCeEEEEECCcCCCCHHHHHHHHH
Confidence 33433334556678877777776654 447776554 44 32 2244555
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCcEEE
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLL 411 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~G~l 411 (427)
.++++-- +++..+...++.+|+.++++.+|++++-+ ...+++| .++=.+..|+||+-+. .+-..++.+. ..-++
T Consensus 198 ~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~--~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~-gv~Vl 273 (322)
T PRK02797 198 AGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIF--ARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQ-GLPVL 273 (322)
T ss_pred HHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEee--chhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhC-CCeEE
Confidence 5666544 67777776699999999999999999852 2227788 4666889999999886 5555554433 33343
Q ss_pred e
Q 014316 412 F 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 274 f 274 (322)
T PRK02797 274 F 274 (322)
T ss_pred e
Confidence 4
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0025 Score=71.20 Aligned_cols=133 Identities=8% Similarity=0.043 Sum_probs=97.0
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC----EEEEEEeC-----CCChH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGK-----GPDKE 329 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~i~G~-----G~~~~ 329 (427)
.+|+.+.|+..-||+..=+.|+..+.++ +|+ +.|+-+.- +++..
T Consensus 340 ~~ilgVDrlD~~KGi~~kl~A~e~~L~~---------------------------~P~~~gkvvlvQia~psr~~~~~y~ 392 (854)
T PLN02205 340 IMLLGVDDMDIFKGISLKLLAMEQLLMQ---------------------------HPEWQGKVVLVQIANPARGKGKDVK 392 (854)
T ss_pred EEEEEccCcccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEecCCCcccHHHH
Confidence 5899999999999999999999999887 554 46665542 22222
Q ss_pred ----HHHHHHHHc----C---CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC---------
Q 014316 330 ----SYEEKIRRL----R---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL--------- 389 (427)
Q Consensus 330 ----~~~~~~~~l----~---l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~--------- 389 (427)
++++++.+. | ..-|.++..-++.+++.++|+.||+++.. +.++|.=++..||.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT---~lRDGMNLva~Eyia~~~~~~~~~~~~ 469 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVT---AVRDGMNLIPYEYIISRQGNEKLDKLL 469 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEec---cccccccccchheeEEccCcccccccc
Confidence 333444443 2 22377775558999999999999999985 778888889999999854
Q ss_pred ----------cEEEeccCccccceecCCcEEEe--CChHHHHHHHHH
Q 014316 390 ----------PVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 390 ----------PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~ 424 (427)
.+|.|...|++..+. ..++| -|.+++|++|.+
T Consensus 470 ~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~ 513 (854)
T PLN02205 470 GLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDS 513 (854)
T ss_pred ccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHH
Confidence 366777666555552 35677 457889988765
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0024 Score=63.18 Aligned_cols=242 Identities=17% Similarity=0.183 Sum_probs=134.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+.+=++.|+-.. +.++++.+..+.+..++ .||=||-.+... ..+...+++..+.+...++...|++ ++.+..
T Consensus 77 ~r~~kff~HGqFn-~~lwlaLl~g~~~~~k~--~WhIWGaDLYe~---~~~~k~rlfy~lRr~aq~rvg~V~a-t~GDl~ 149 (360)
T PF07429_consen 77 DRADKFFLHGQFN-PWLWLALLFGKIKLKKC--YWHIWGADLYED---SRSLKFRLFYFLRRLAQKRVGHVFA-TRGDLA 149 (360)
T ss_pred CccceEEEeccCc-HHHHHHHHcCCccccce--EEEEeCchhhcc---ccccchhHHHHHHHHHHhhcCeEEE-EcchHH
Confidence 6788788887332 33343444433333333 466554433322 1222244555677778788877765 678877
Q ss_pred HHHHhhCCe-EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCC
Q 014316 180 ELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (427)
Q Consensus 180 ~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (427)
.+++.++.. ...++ .|+..+..... .........+
T Consensus 150 ~~~q~~~~~~~~~ly-------fPt~m~~~~~~-------------------------------------~~~~~~~~~~ 185 (360)
T PF07429_consen 150 YFQQRYPRVPASLLY-------FPTRMDPALTL-------------------------------------SEKNKKNKGK 185 (360)
T ss_pred HHHHHcCCCCceEEE-------cCCCCchhhhc-------------------------------------cccccCCCCc
Confidence 888876432 22222 22211000000 0001112233
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE-EeCCCC----hHHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPD----KESYEE 333 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-~G~G~~----~~~~~~ 333 (427)
..|+.-.+-.+.-++...+++++... ..++++++ .|-|.. .+++++
T Consensus 186 ltILvGNSgd~sNnHieaL~~L~~~~-----------------------------~~~~kIivPLsYg~~n~~Yi~~V~~ 236 (360)
T PF07429_consen 186 LTILVGNSGDPSNNHIEALEALKQQF-----------------------------GDDVKIIVPLSYGANNQAYIQQVIQ 236 (360)
T ss_pred eEEEEcCCCCCCccHHHHHHHHHHhc-----------------------------CCCeEEEEECCCCCchHHHHHHHHH
Confidence 34443334556667866666655532 34677544 455543 234445
Q ss_pred HHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEeccCccccceecCCcEEE
Q 014316 334 KIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 334 ~~~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
.++++ +-+++..+...++.+|+.++++.||++++. ..+ .++| .++=.+.+|+||+-+.....-..+++..-=++
T Consensus 237 ~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~---~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ipVl 312 (360)
T PF07429_consen 237 AGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFN---HNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQGIPVL 312 (360)
T ss_pred HHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEe---echhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCCCeEE
Confidence 55555 335787765449999999999999999986 444 7788 46778999999999986655555544433344
Q ss_pred e-CC---hHHHHHHHHHh
Q 014316 412 F-SS---SSELADQLLVN 425 (427)
Q Consensus 412 ~-~~---~~~la~~l~~~ 425 (427)
+ +| ...++++=+.|
T Consensus 313 f~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 313 FYGDELDEALVREAQRQL 330 (360)
T ss_pred eccccCCHHHHHHHHHHH
Confidence 4 23 34555544333
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.6e-05 Score=73.71 Aligned_cols=81 Identities=19% Similarity=0.166 Sum_probs=47.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhc-------CCcEEEEecccchhhhh----h-hcCCC-chH--------HHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-------RSAFIVDWHNFGYTLLS----L-SLGRR-SHF--------VSIYRW 158 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~-------~~p~i~~~h~~~~~~~~----~-~~~~~-~~~--------~~~~~~ 158 (427)
.+|||||+|+ +.+.++..+++... ++|+++|+|+..|.-.. . ..+-. ..+ .....
T Consensus 132 ~~pDIIH~hD---W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in- 207 (245)
T PF08323_consen 132 WKPDIIHCHD---WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQIN- 207 (245)
T ss_dssp -S-SEEEEEC---GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEE-
T ss_pred CCCCEEEecC---chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccC-
Confidence 5899999999 66666555665544 69999999997662110 0 00000 000 00001
Q ss_pred HHHHHhccCCEEEEcCHHHHHHHHHh
Q 014316 159 IEKYYGKMANGCLCVTQAMQHELAQN 184 (427)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~ 184 (427)
+.+.....||.|++||+..+++++..
T Consensus 208 ~lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 208 FLKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred HHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 23455678999999999999888653
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00045 Score=69.89 Aligned_cols=234 Identities=13% Similarity=0.193 Sum_probs=107.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+.+++++.+ ..... .......+.++|..||+.+.--........... ........+..|.+++.|+.+++
T Consensus 77 ~~Ak~~i~~~--~~~~~---~~~~~~~~~~~i~lwHG~~~K~~g~~~~~~~~~----~~~~~~~~~~~d~~~~~s~~~~~ 147 (369)
T PF04464_consen 77 ARAKYIISDS--YFPDL---IYFKKRKNQKYIQLWHGIPLKKIGYDSPDNKNY----RKNYKRNYRNYDYFIVSSEFEKE 147 (369)
T ss_dssp HHEEEEEESS-----T-----TS---TTSEEEE--SS--SB--GGG-S---TS-----HHHHHHHTT-SEEEESSHHHHH
T ss_pred HhCcEEEECC--CCCcc---cccccCCCcEEEEecCCCcccccchhccccccc----hhhhhhhccCCcEEEECCHHHHH
Confidence 3577887774 11111 122345678899999998541111111000000 00223345678999999999999
Q ss_pred HHHHhhCCe-EEEecCC-C-CCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK-ATVLYDQ-P-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~-~~vi~n~-~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
.+.+.++.+ -.++..| | .+.+.........++... ++...+
T Consensus 148 ~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~------------------------------------~~~~~~ 191 (369)
T PF04464_consen 148 IFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKK------------------------------------LGIDKD 191 (369)
T ss_dssp HHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHH------------------------------------TT--SS
T ss_pred HHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHH------------------------------------hccCCC
Confidence 998888776 2444455 2 111111111112222211 233344
Q ss_pred CCeEEEEEeecCCCCCH------HHH--HHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 257 RPALVVSSTSWTPDEDF------GIL--LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~------~~L--i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
+. +|+|+=+|.....- ... .+.+..+. .+++.+++-..--
T Consensus 192 ~k-~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~-----------------------------~~~~~li~k~Hp~-- 239 (369)
T PF04464_consen 192 KK-VILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLL-----------------------------KNNYVLIIKPHPN-- 239 (369)
T ss_dssp -E-EEEEE----GGG--GGSS----TT-HHHHHHHH-----------------------------TTTEEEEE--SHH--
T ss_pred Cc-EEEEeeccccccccccccccccccCHHHHHHHh-----------------------------CCCcEEEEEeCch--
Confidence 43 88888776654432 111 22222111 4578888866321
Q ss_pred HHHHHHHHH-cC-CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe--cc-------C
Q 014316 329 ESYEEKIRR-LR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV--SY-------S 397 (427)
Q Consensus 329 ~~~~~~~~~-l~-l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas--~~-------~ 397 (427)
....... .. .++|.+... .+++.+++..||++|. . .+.+++|++.+++|||-- +. |
T Consensus 240 --~~~~~~~~~~~~~~i~~~~~---~~~~~~ll~~aDiLIT--D------ySSi~fD~~~l~KPiify~~D~~~Y~~~rg 306 (369)
T PF04464_consen 240 --MKKKFKDFKEDNSNIIFVSD---NEDIYDLLAAADILIT--D------YSSIIFDFLLLNKPIIFYQPDLEEYEKERG 306 (369)
T ss_dssp --HHTT----TT-TTTEEE-TT----S-HHHHHHT-SEEEE--S------S-THHHHHGGGT--EEEE-TTTTTTTTTSS
T ss_pred --hhhchhhhhccCCcEEECCC---CCCHHHHHHhcCEEEE--e------chhHHHHHHHhCCCEEEEeccHHHHhhccC
Confidence 1222221 12 247888665 6699999999999994 1 233899999999999954 22 1
Q ss_pred ccccceecCCcEEEeCChHHHHHHHHH
Q 014316 398 CIEELVKVDKNGLLFSSSSELADQLLV 424 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~~~~~la~~l~~ 424 (427)
...+ ..+...|-.+.+.++|.++|..
T Consensus 307 ~~~~-~~~~~pg~~~~~~~eL~~~i~~ 332 (369)
T PF04464_consen 307 FYFD-YEEDLPGPIVYNFEELIEAIEN 332 (369)
T ss_dssp BSS--TTTSSSS-EESSHHHHHHHHTT
T ss_pred CCCc-hHhhCCCceeCCHHHHHHHHHh
Confidence 2222 2234457788889999988865
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.005 Score=61.36 Aligned_cols=103 Identities=17% Similarity=0.112 Sum_probs=68.8
Q ss_pred CCCCCeEEEEEee-cCCCCC--HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 254 KPNRPALVVSSTS-WTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 254 ~~~~~~~i~~~g~-~~~~K~--~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
..+++.+++..|. +.+.|. .+...+.+..+.+. +..+++.|...+++.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~-----------------------------~~~ivl~G~~~e~~~ 221 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ-----------------------------GYQVVLFGSAKDHPA 221 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC-----------------------------CCEEEEEEChhhHHH
Confidence 3445666666665 445554 44677777666532 467888887766666
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
.+++.+..+-..+.+.|. .+-.++..+++.||++|.. .++ .+==|-|.|+|+|+-
T Consensus 222 ~~~i~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~~---DSG-----p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 222 GNEIEALLPGELRNLAGE-TSLDEAVDLIALAKAVVTN---DSG-----LMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHHhCCcccccCCCC-CCHHHHHHHHHhCCEEEee---CCH-----HHHHHHHcCCCEEEE
Confidence 666555433222456776 7899999999999999974 333 344577899999975
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0074 Score=63.90 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=51.7
Q ss_pred CcEEEecCCCCcccHHHHH--hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEeC-
Q 014316 341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~~- 413 (427)
+||.+.+ |+|+. +++ ..++++|. ++- . ..+.||+.+|+|+|+....+ ....+...+.|...+
T Consensus 346 ~Nv~i~~-w~Pq~---~lL~hp~v~~fIt-----HGG-~-~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~ 414 (507)
T PHA03392 346 ANVLTQK-WFPQR---AVLKHKNVKAFVT-----QGG-V-QSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT 414 (507)
T ss_pred CceEEec-CCCHH---HHhcCCCCCEEEe-----cCC-c-ccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc
Confidence 5888877 68884 566 56888883 331 2 27999999999999987432 344455566777662
Q ss_pred ---ChHHHHHHHHHh
Q 014316 414 ---SSSELADQLLVN 425 (427)
Q Consensus 414 ---~~~~la~~l~~~ 425 (427)
+.++++++|.++
T Consensus 415 ~~~t~~~l~~ai~~v 429 (507)
T PHA03392 415 VTVSAAQLVLAIVDV 429 (507)
T ss_pred CCcCHHHHHHHHHHH
Confidence 458888888765
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00086 Score=67.41 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=59.4
Q ss_pred CeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 258 PALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 258 ~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
+.+.++-|+-. -.+-+..+++++.++.++ ...+++.|... .+.+++..
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~-----------------------------~~~~~i~~a~~-~~~i~~~~ 217 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGK-----------------------------EKILVVPSFFK-GKDLKEIY 217 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhc-----------------------------CcEEEEeCCCc-HHHHHHHH
Confidence 44556666532 224556666787777653 26788887653 34555544
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 336 ~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.+. ..+.+. ++..++++.||+.++- .|.+.+|++.+|+|.|..-
T Consensus 218 ~~~--~~~~~~------~~~~~~m~~aDlal~~--------SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 218 GDI--SEFEIS------YDTHKALLEAEFAFIC--------SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred hcC--CCcEEe------ccHHHHHHhhhHHHhc--------CcHHHHHHHHhCCCEEEEE
Confidence 332 234443 2557899999999973 4567789999999999764
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0031 Score=65.81 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=82.3
Q ss_pred ccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-
Q 014316 250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK- 328 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~- 328 (427)
+++++.+. .++.+.+ ...|-...+.+.-.++.+. .|+-.|.+-|.|++.
T Consensus 423 ~lglp~~a-vVf~c~~--n~~K~~pev~~~wmqIL~~---------------------------vP~Svl~L~~~~~~~~ 472 (620)
T COG3914 423 QLGLPEDA-VVFCCFN--NYFKITPEVFALWMQILSA---------------------------VPNSVLLLKAGGDDAE 472 (620)
T ss_pred hcCCCCCe-EEEEecC--CcccCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCCcHH
Confidence 34665553 2333333 4456666777766665555 799999999988654
Q ss_pred --HHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 329 --ESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 329 --~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..+++++++.|++ +..|.+. .+.++..+.|+-||+++- +...+=..+.+|++-+|+||++-
T Consensus 473 ~~~~l~~la~~~Gv~~eRL~f~p~-~~~~~h~a~~~iADlvLD----TyPY~g~TTa~daLwm~vPVlT~ 537 (620)
T COG3914 473 INARLRDLAEREGVDSERLRFLPP-APNEDHRARYGIADLVLD----TYPYGGHTTASDALWMGVPVLTR 537 (620)
T ss_pred HHHHHHHHHHHcCCChhheeecCC-CCCHHHHHhhchhheeee----cccCCCccchHHHHHhcCceeee
Confidence 4678899999994 7999998 999999999999999995 33334455899999999999974
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.08 Score=53.21 Aligned_cols=100 Identities=11% Similarity=0.013 Sum_probs=63.0
Q ss_pred CeEEEEEeecCCCCC--HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHHHHH
Q 014316 258 PALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEE 333 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~--~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~~~~ 333 (427)
+.+++..|.-.+.|. .+...+.++.+.+. +..++++|...+ .+..++
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-----------------------------~~~vvl~ggp~e~e~~~~~~ 234 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQAR-----------------------------GYEVVLTSGPDKDDLACVNE 234 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHC-----------------------------CCeEEEEcCCChHHHHHHHH
Confidence 456666665444554 44666666666432 467777775322 222344
Q ss_pred HHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 334 KIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 334 ~~~~l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.++.....+ +.+.|. .+-.++.++++.||++|.. .++ .+==|-|.|+|+|+--
T Consensus 235 i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~v~n---DSG-----p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 235 IAQGCQTPPVTALAGK-TTFPELGALIDHAQLFIGV---DSA-----PAHIAAAVNTPLICLF 288 (352)
T ss_pred HHHhcCCCccccccCC-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEEEEE
Confidence 444333233 556776 8899999999999999963 333 3555778999999754
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.046 Score=54.87 Aligned_cols=70 Identities=17% Similarity=0.158 Sum_probs=49.8
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCC---c-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcE
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLK---R-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 391 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~---~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PV 391 (427)
++.+++.|...+++..++..+.++-. + +.+.|. .+-.++.++++.||++|.. ..+ .+==|-|.|+|+
T Consensus 213 ~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~n---DTG-----p~HlAaA~g~P~ 283 (348)
T PRK10916 213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGE-TQLEQAVILIAACKAIVTN---DSG-----LMHVAAALNRPL 283 (348)
T ss_pred CCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCC-CCHHHHHHHHHhCCEEEec---CCh-----HHHHHHHhCCCE
Confidence 56788888766666666665554321 2 456676 7889999999999999964 333 344578899999
Q ss_pred EEe
Q 014316 392 CAV 394 (427)
Q Consensus 392 Ias 394 (427)
|+-
T Consensus 284 val 286 (348)
T PRK10916 284 VAL 286 (348)
T ss_pred EEE
Confidence 965
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.015 Score=60.49 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=100.0
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hH------
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KE------ 329 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~------ 329 (427)
.++|+.+-|+..-||+..=+.|+..+.+.+..- ..++.|+-++..+. .+
T Consensus 282 ~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~-----------------------~~kvvliQi~~pSr~~v~~y~~~~ 338 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEW-----------------------RGKVVLLQIAPPSREDVEEYQALR 338 (486)
T ss_pred ceEEEEehhcccccCcHHHHHHHHHHHHhChhh-----------------------hCceEEEEecCCCccccHHHHHHH
Confidence 458999999999999999999999998762111 22466766664421 12
Q ss_pred -HHHHHHHHc----CC---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC----CcEEEeccC
Q 014316 330 -SYEEKIRRL----RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYS 397 (427)
Q Consensus 330 -~~~~~~~~l----~l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G----~PVIas~~~ 397 (427)
++++++.+. |- .-|.|+..-++.+++.++|+.||+++.. |.++|.-++..|+.||- =+.|-|...
T Consensus 339 ~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVt---plrDGMNLvakEyVa~q~~~~G~LiLSeFa 415 (486)
T COG0380 339 LQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT---PLRDGMNLVAKEYVAAQRDKPGVLILSEFA 415 (486)
T ss_pred HHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeec---cccccccHHHHHHHHhhcCCCCcEEEeccc
Confidence 223333332 22 2377777768999999999999999984 78899999999999984 377888877
Q ss_pred ccccceecCCcEEEeC--ChHHHHHHHHH
Q 014316 398 CIEELVKVDKNGLLFS--SSSELADQLLV 424 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~--~~~~la~~l~~ 424 (427)
|.+..+.+ .++++ |.+++|++|..
T Consensus 416 Gaa~~L~~---AliVNP~d~~~va~ai~~ 441 (486)
T COG0380 416 GAASELRD---ALIVNPWDTKEVADAIKR 441 (486)
T ss_pred cchhhhcc---CEeECCCChHHHHHHHHH
Confidence 76666643 67774 56888888764
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.024 Score=56.68 Aligned_cols=100 Identities=23% Similarity=0.242 Sum_probs=71.0
Q ss_pred CCeEEEEEe-ecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 257 RPALVVSST-SWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 257 ~~~~i~~~g-~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++.+++..| +....|.. +...+.+..+.++ .+.+++.|...+.+..++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~-----------------------------~~~Vvl~g~~~e~e~~~~ 225 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAK-----------------------------GYQVVLFGGPDEEERAEE 225 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHC-----------------------------CCEEEEecChHHHHHHHH
Confidence 456777777 66566654 4666666666654 378899998866666666
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+.+.++- .+.+.|. .+-+++..++..||++|.+ .++ .+==|-|.|+|+|+--
T Consensus 226 i~~~~~~-~~~l~~k-~sL~e~~~li~~a~l~I~~---DSg-----~~HlAaA~~~P~I~iy 277 (334)
T COG0859 226 IAKGLPN-AVILAGK-TSLEELAALIAGADLVIGN---DSG-----PMHLAAALGTPTIALY 277 (334)
T ss_pred HHHhcCC-ccccCCC-CCHHHHHHHHhcCCEEEcc---CCh-----HHHHHHHcCCCEEEEE
Confidence 6666542 2337787 8899999999999999975 333 3555889999999875
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0023 Score=66.38 Aligned_cols=114 Identities=11% Similarity=0.032 Sum_probs=73.7
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
.|.+++++.+. ++++...++ .|=-+..+++..++.++ .|+.+|++...+.
T Consensus 275 ~R~~~gLp~d~-vvF~~fn~~--~KI~p~~l~~W~~IL~~---------------------------vP~S~L~L~~~~~ 324 (468)
T PF13844_consen 275 TRAQYGLPEDA-VVFGSFNNL--FKISPETLDLWARILKA---------------------------VPNSRLWLLRFPA 324 (468)
T ss_dssp ETGGGT--SSS-EEEEE-S-G--GG--HHHHHHHHHHHHH---------------------------STTEEEEEEETST
T ss_pred CHHHcCCCCCc-eEEEecCcc--ccCCHHHHHHHHHHHHh---------------------------CCCcEEEEeeCCH
Confidence 55667777664 355544444 46677888888888887 8999998876543
Q ss_pred -ChHHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 327 -DKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 327 -~~~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
..+.+++.+++.|++ ++.|.+. .+.++....++.+|+++=+ ..-+=+.+.+||+.+|+|||+-.
T Consensus 325 ~~~~~l~~~~~~~Gv~~~Ri~f~~~-~~~~ehl~~~~~~DI~LDT----~p~nG~TTt~dALwmGVPvVTl~ 391 (468)
T PF13844_consen 325 SGEARLRRRFAAHGVDPDRIIFSPV-APREEHLRRYQLADICLDT----FPYNGGTTTLDALWMGVPVVTLP 391 (468)
T ss_dssp THHHHHHHHHHHTTS-GGGEEEEE----HHHHHHHGGG-SEEE------SSS--SHHHHHHHHHT--EEB--
T ss_pred HHHHHHHHHHHHcCCChhhEEEcCC-CCHHHHHHHhhhCCEEeeC----CCCCCcHHHHHHHHcCCCEEecc
Confidence 346778888899994 7999996 8888888899999999963 22223568999999999999875
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.034 Score=53.86 Aligned_cols=74 Identities=26% Similarity=0.208 Sum_probs=53.2
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
++++++.|..++.+..+++.+.++- ..+.+.|. .+..++..+++.||++|.. ..+ .+--|.|.|+|+|+-
T Consensus 153 ~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~-~~l~e~~~li~~~~l~I~~---Dsg-----~~HlA~a~~~p~i~l 223 (279)
T cd03789 153 GARVVLTGGPAERELAEEIAAALGGPRVVNLAGK-TSLRELAALLARADLVVTN---DSG-----PMHLAAALGTPTVAL 223 (279)
T ss_pred CCEEEEEechhhHHHHHHHHHhcCCCccccCcCC-CCHHHHHHHHHhCCEEEee---CCH-----HHHHHHHcCCCEEEE
Confidence 6788888877666666666665532 23556776 6889999999999999974 222 455567999999987
Q ss_pred ccCc
Q 014316 395 SYSC 398 (427)
Q Consensus 395 ~~~g 398 (427)
-.+.
T Consensus 224 ~g~~ 227 (279)
T cd03789 224 FGPT 227 (279)
T ss_pred ECCC
Confidence 5433
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.01 Score=61.06 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=61.6
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
+.++++...+ .+..+ -++ .|+...+. ++. .+++..||++|+. ...+ ++.|++.+|+|+|+-
T Consensus 265 ~~~vi~~~~~-~~~~~------~~~p~n~~v~~~-~p~---~~~l~~ad~vI~h--GG~g-----tt~eaL~~gvP~vv~ 326 (406)
T COG1819 265 DVRVIVSLGG-ARDTL------VNVPDNVIVADY-VPQ---LELLPRADAVIHH--GGAG-----TTSEALYAGVPLVVI 326 (406)
T ss_pred CcEEEEeccc-ccccc------ccCCCceEEecC-CCH---HHHhhhcCEEEec--CCcc-----hHHHHHHcCCCEEEe
Confidence 4666666644 11111 133 47777774 666 5689999999962 2222 799999999999998
Q ss_pred ccCc----cccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 395 SYSC----IEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 395 ~~~g----~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
..+. ..+-+++-..|.... +.+.++++++++
T Consensus 327 P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~v 365 (406)
T COG1819 327 PDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEV 365 (406)
T ss_pred cCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHH
Confidence 7542 455566677787662 467888888765
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0047 Score=61.61 Aligned_cols=84 Identities=18% Similarity=0.309 Sum_probs=66.5
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCC---chHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHH
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL---PMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~---p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~l 418 (427)
++...|...+.+.++..++-.|+.+.-.+.+.-+++ ++-++|+++||.|.+++...++.....+|+.=++..|..++
T Consensus 238 ~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~kdl 317 (373)
T COG4641 238 NVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSKDL 317 (373)
T ss_pred hhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHHHH
Confidence 455556523358999999999999874332322333 89999999999999999999999999999988888999999
Q ss_pred HHHHHHh
Q 014316 419 ADQLLVN 425 (427)
Q Consensus 419 a~~l~~~ 425 (427)
.+++..+
T Consensus 318 ~~~~~yl 324 (373)
T COG4641 318 KEKLKYL 324 (373)
T ss_pred HHHHHHH
Confidence 9888765
|
|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0066 Score=61.46 Aligned_cols=241 Identities=18% Similarity=0.174 Sum_probs=134.8
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
.+|+.....|+.+.+||+-+.-+.......+ =.+.||| +...|... +| |++|..+.
T Consensus 244 C~ERaa~h~AhVFTTVSeITa~EAeHlLkRKPD~itPNGLNV~KFsA~-----HE-FQNLHA~~---------------- 301 (692)
T KOG3742|consen 244 CLERAAAHTAHVFTTVSEITALEAEHLLKRKPDVITPNGLNVKKFSAV-----HE-FQNLHAQK---------------- 301 (692)
T ss_pred HHHHHhhhhhhhhhhHHHHHHHHHHHHHhcCCCeeCCCCcceeehhHH-----HH-HHHHHHHH----------------
Confidence 5788888899999999997775554444333 4566999 65556432 11 22222110
Q ss_pred CCccchhhh-cccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhcc---------CCCch------
Q 014316 236 QKADETIFT-SLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNE---------DDSTN------ 298 (427)
Q Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~---------~~~~~------ 298 (427)
|.+-..|- .-.-.-+...-++.+.+..+||.+ ..||-+.+||+++.|.-.++-.+.. .+.||
T Consensus 302 -KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVes 380 (692)
T KOG3742|consen 302 -KEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVES 380 (692)
T ss_pred -HHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhh
Confidence 01111110 000011233555667788889988 7899999999999986542211000 01111
Q ss_pred -----------------hhhhhh---------hhcCCccc-------------------CCCCEEEEEEeCCCChHHHHH
Q 014316 299 -----------------EEVFLK---------EISDGKQY-------------------LYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 299 -----------------~~~~~~---------~~~~~~~~-------------------~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++.|-+ ++|+-.+. ..|.+.-.=.-+.. .+.+-.
T Consensus 381 LkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa-~DpiL~ 459 (692)
T KOG3742|consen 381 LKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDA-NDPILS 459 (692)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccc-cchHHH
Confidence 111111 11111000 11111111011111 123344
Q ss_pred HHHHcCC-----Cc--EEEecCCCC------cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc-
Q 014316 334 KIRRLRL-----KR--VAFRTMWLS------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI- 399 (427)
Q Consensus 334 ~~~~l~l-----~~--V~f~g~~~~------~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~- 399 (427)
.+++.++ ++ |.|....++ .-|+.++.+.|.++|+| |.+|..|-+..|.-.+|+|-|+|+.+|.
T Consensus 460 ~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFP---SYYEPWGYTPAECTVMGiPSvtTNlSGFG 536 (692)
T KOG3742|consen 460 SIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFP---SYYEPWGYTPAECTVMGIPSVTTNLSGFG 536 (692)
T ss_pred HhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccc---cccCCCCCCchheEEeccccccccccchh
Confidence 5566555 22 666554333 23788999999999998 9999999999999999999999998775
Q ss_pred ---ccceecCC-cEEEe-----C----ChHHHHHHHHHh
Q 014316 400 ---EELVKVDK-NGLLF-----S----SSSELADQLLVN 425 (427)
Q Consensus 400 ---~e~v~~~~-~G~l~-----~----~~~~la~~l~~~ 425 (427)
.|.|.+.. .|+.+ . +.++|++-|.+.
T Consensus 537 cfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F 575 (692)
T KOG3742|consen 537 CFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEF 575 (692)
T ss_pred hhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHH
Confidence 44454333 47665 1 236677666543
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.14 Score=50.07 Aligned_cols=285 Identities=14% Similarity=0.092 Sum_probs=149.2
Q ss_pred CCCCChhH---HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchh-hHHHHHHHHHHHHH
Q 014316 14 DLGRSPRM---QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL-KPVLLLLKPLIQFF 89 (427)
Q Consensus 14 ~~~~~~r~---~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 89 (427)
|++.++.+ ......|.++ ||+|.+.|...+. ..+..+.-|+.+..+. . .+...+. +.+....+..
T Consensus 6 DI~n~~hvhfFk~lI~elekk-G~ev~iT~rd~~~-v~~LLd~ygf~~~~Ig--k---~g~~tl~~Kl~~~~eR~~---- 74 (346)
T COG1817 6 DIGNPPHVHFFKNLIWELEKK-GHEVLITCRDFGV-VTELLDLYGFPYKSIG--K---HGGVTLKEKLLESAERVY---- 74 (346)
T ss_pred EcCCcchhhHHHHHHHHHHhC-CeEEEEEEeecCc-HHHHHHHhCCCeEeec--c---cCCccHHHHHHHHHHHHH----
Confidence 34444443 3345678886 9999999866544 5566677788888887 2 2111111 1111111111
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCE
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
.+ .. +....+||+.+.-..+. +...++..|+|.|+-..+- . ...-+++....||.
T Consensus 75 ~L-~k-i~~~~kpdv~i~~~s~~------l~rvafgLg~psIi~~D~e-h----------------A~~qnkl~~Pla~~ 129 (346)
T COG1817 75 KL-SK-IIAEFKPDVAIGKHSPE------LPRVAFGLGIPSIIFVDNE-H----------------AEAQNKLTLPLADV 129 (346)
T ss_pred HH-HH-HHhhcCCceEeecCCcc------hhhHHhhcCCceEEecCCh-h----------------HHHHhhcchhhhhh
Confidence 11 11 11237999887733111 3455667799987643322 1 01225566778999
Q ss_pred EEEcCHHHHHHHHHhhCCeEEE-ecCC-----CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 170 CLCVTQAMQHELAQNWGIKATV-LYDQ-----PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~~~v-i~n~-----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
+++.+-.....+......+..+ -+|| +...|.|.+ +.+.+
T Consensus 130 ii~P~~~~~~~~~~~G~~p~~i~~~~giae~~~v~~f~pd~-----evlke----------------------------- 175 (346)
T COG1817 130 IITPEAIDEEELLDFGADPNKISGYNGIAELANVYGFVPDP-----EVLKE----------------------------- 175 (346)
T ss_pred eecccccchHHHHHhCCCccceecccceeEEeecccCCCCH-----HHHHH-----------------------------
Confidence 9888877777766653333333 3455 122344432 22222
Q ss_pred hcccccccccCCCCCeEEEEEe-----ecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE
Q 014316 244 TSLAGIDVFLKPNRPALVVSST-----SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g-----~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
+++..+.+.+++=-- -....++.+.+-++++++.+. + .
T Consensus 176 -------Lgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~----------------------------g--i 218 (346)
T COG1817 176 -------LGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY----------------------------G--I 218 (346)
T ss_pred -------cCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhC----------------------------c--E
Confidence 245555553332111 122345666778888887763 3 3
Q ss_pred EEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-
Q 014316 319 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS- 397 (427)
Q Consensus 319 l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~- 397 (427)
++|--. .+.++..++. .++...- +.-|-.+++--|++++- . -|.-.-||...|+|.|++.-|
T Consensus 219 V~ipr~----~~~~eife~~--~n~i~pk---~~vD~l~Llyya~lvig-----~---ggTMarEaAlLGtpaIs~~pGk 281 (346)
T COG1817 219 VLIPRE----KEQAEIFEGY--RNIIIPK---KAVDTLSLLYYATLVIG-----A---GGTMAREAALLGTPAISCYPGK 281 (346)
T ss_pred EEecCc----hhHHHHHhhh--ccccCCc---ccccHHHHHhhhheeec-----C---CchHHHHHHHhCCceEEecCCc
Confidence 333222 2333344432 2333211 13344457777888873 2 234578999999999999833
Q ss_pred --ccccceecCCcEEEeC--Ch-HHHHHHHHH
Q 014316 398 --CIEELVKVDKNGLLFS--SS-SELADQLLV 424 (427)
Q Consensus 398 --g~~e~v~~~~~G~l~~--~~-~~la~~l~~ 424 (427)
.+.+.. -+.|.++. |+ +.++-+++.
T Consensus 282 ll~vdk~l--ie~G~~~~s~~~~~~~~~a~~~ 311 (346)
T COG1817 282 LLAVDKYL--IEKGLLYHSTDEIAIVEYAVRN 311 (346)
T ss_pred cccccHHH--HhcCceeecCCHHHHHHHHHHH
Confidence 233333 24677773 33 444444433
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.26 Score=49.19 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=47.3
Q ss_pred CEEEEEEeCCCC--hHHHHHHHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 316 RLLFIITGKGPD--KESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 316 ~~~l~i~G~G~~--~~~~~~~~~~l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
+..+++.|...+ .+..++..+..+-.+ +.+.|. .+-.++.++++.||++|.. .++ .+==|-|.|+|+|
T Consensus 213 ~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~Vs~---DSG-----p~HlAaA~g~p~v 283 (344)
T TIGR02201 213 GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGK-LTLPQLAALIDHARLFIGV---DSV-----PMHMAAALGTPLV 283 (344)
T ss_pred CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCC-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEE
Confidence 467788885432 223444444433333 556776 8899999999999999964 333 3555788999999
Q ss_pred Eec
Q 014316 393 AVS 395 (427)
Q Consensus 393 as~ 395 (427)
+--
T Consensus 284 ~Lf 286 (344)
T TIGR02201 284 ALF 286 (344)
T ss_pred EEE
Confidence 753
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.18 Score=49.75 Aligned_cols=130 Identities=16% Similarity=0.079 Sum_probs=76.5
Q ss_pred CCCeEEEEEeecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-HHHH
Q 014316 256 NRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-~~~~ 332 (427)
+++.+++..|.=.+.|.. +...+.+..+.++ +..+++.|.|+.+ +..+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~-----------------------------~~~~vl~~g~~~e~~~~~ 228 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLAR-----------------------------GLQIVLPWGNDAEKQRAE 228 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC-----------------------------CCeEEEeCCCHHHHHHHH
Confidence 345566666653455544 5666666666432 4677777655533 4444
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec-C-CcEE
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-D-KNGL 410 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~-~-~~G~ 410 (427)
++.+.+ .+..+.|. .+-.++.++++.||++|.. .++ .+==|-|.|+|+|+--.+..+.-... + ...+
T Consensus 229 ~i~~~~--~~~~l~g~-~sL~el~ali~~a~l~I~~---DSg-----p~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~ 297 (319)
T TIGR02193 229 RIAEAL--PGAVVLPK-MSLAEVAALLAGADAVVGV---DTG-----LTHLAAALDKPTVTLYGATDPGRTGGYGKPNVA 297 (319)
T ss_pred HHHhhC--CCCeecCC-CCHHHHHHHHHcCCEEEeC---CCh-----HHHHHHHcCCCEEEEECCCCHhhcccCCCCceE
Confidence 444433 34456787 8899999999999999974 333 34447788999997643222211111 1 1122
Q ss_pred Ee------CChHHHHHHHHHh
Q 014316 411 LF------SSSSELADQLLVN 425 (427)
Q Consensus 411 l~------~~~~~la~~l~~~ 425 (427)
+. -++++..++++++
T Consensus 298 ~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 298 LLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred EccCccCCCCHHHHHHHHHhh
Confidence 22 1367888887764
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.41 Score=47.49 Aligned_cols=75 Identities=20% Similarity=0.142 Sum_probs=54.2
Q ss_pred EEEEEEeCCCChHHHHHHHHHcC--CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 317 LLFIITGKGPDKESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l~--l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..+.|...--..++.++..+++- ...+.+... -+.+-+..+|+.||.+++... |. +=+.||.++|+||..-
T Consensus 183 ~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~-~~~nPy~~~La~ad~i~VT~D-Sv-----SMvsEA~~tG~pV~v~ 255 (311)
T PF06258_consen 183 GSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDG-TGENPYLGFLAAADAIVVTED-SV-----SMVSEAAATGKPVYVL 255 (311)
T ss_pred CeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecC-CCCCcHHHHHHhCCEEEEcCc-cH-----HHHHHHHHcCCCEEEe
Confidence 78888887666666666666542 245644444 456669999999999998532 22 2589999999999998
Q ss_pred ccCc
Q 014316 395 SYSC 398 (427)
Q Consensus 395 ~~~g 398 (427)
...+
T Consensus 256 ~l~~ 259 (311)
T PF06258_consen 256 PLPG 259 (311)
T ss_pred cCCC
Confidence 8766
|
The function of this family is unknown. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.84 Score=43.80 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCEEEEEEeCCCChHHHHHHHHH-cCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 315 PRLLFIITGKGPDKESYEEKIRR-LRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~-l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
..+.|++.-.-...+..+..++. +.-.- +.+-+.--..+-+.++++.||..+.. .+|-. -.-||.+.|+||-
T Consensus 196 ~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~T-aDSin-----M~sEAasTgkPv~ 269 (329)
T COG3660 196 QGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIIST-ADSIN-----MCSEAASTGKPVF 269 (329)
T ss_pred CCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEe-cchhh-----hhHHHhccCCCeE
Confidence 35778777765566777777665 33222 33322101345688999999999974 22322 4789999999998
Q ss_pred EeccCc
Q 014316 393 AVSYSC 398 (427)
Q Consensus 393 as~~~g 398 (427)
+-.-.+
T Consensus 270 ~~~~~~ 275 (329)
T COG3660 270 ILEPPN 275 (329)
T ss_pred EEecCC
Confidence 765444
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.064 Score=48.39 Aligned_cols=156 Identities=13% Similarity=0.099 Sum_probs=80.3
Q ss_pred CCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCC--CCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcC
Q 014316 32 MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPR--GLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQN 109 (427)
Q Consensus 32 ~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~ 109 (427)
.||+|..+|........ +|+++++.. +.... ....+.+.+-.-...-...++....|..+...||+|++|.
T Consensus 2 ~gh~v~fl~~~~~~~~~-----~GV~~~~y~--~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~ 74 (171)
T PF12000_consen 2 RGHEVVFLTERKRPPIP-----PGVRVVRYR--PPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHP 74 (171)
T ss_pred CCCEEEEEecCCCCCCC-----CCcEEEEeC--CCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcC
Confidence 49999999954332111 588888887 31111 1111111111111111111223333444557899999998
Q ss_pred CCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcC-----CCch---H-HHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 110 PPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLG-----RRSH---F-VSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 110 p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~-----~~~~---~-~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
-..- +..++- ..++|++... .+.|.......+ .... . .++.....-.....||+.++.|+..++
T Consensus 75 GWGe-----~Lflkdv~P~a~li~Y~-E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~ 148 (171)
T PF12000_consen 75 GWGE-----TLFLKDVFPDAPLIGYF-EFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRS 148 (171)
T ss_pred Ccch-----hhhHHHhCCCCcEEEEE-EEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHH
Confidence 2221 112232 3477866522 221311111111 0111 1 122222333444579999999999998
Q ss_pred HHHHhhCCeEEEecCC-CCCCc
Q 014316 180 ELAQNWGIKATVLYDQ-PPEFF 200 (427)
Q Consensus 180 ~l~~~~~~~~~vi~n~-~~~~f 200 (427)
.+-..+..++.||++| |.+.+
T Consensus 149 ~fP~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 149 QFPAEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred hCCHHHHcCcEEeecccchhhc
Confidence 8877777789999999 76554
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.00026 Score=63.31 Aligned_cols=75 Identities=15% Similarity=0.246 Sum_probs=49.2
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--------cccceecCCcEEEe
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g--------~~e~v~~~~~G~l~ 412 (427)
.+|.+.++ .+++.++++.||++|+ ..+ +.++.|++++|+|.|.....+ ....+.+...|..+
T Consensus 55 ~~v~~~~~---~~~m~~~m~~aDlvIs----~aG---~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF---VDNMAELMAAADLVIS----HAG---AGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS---SSSHHHHHHHHSEEEE----CS----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec---hhhHHHHHHHcCEEEe----CCC---ccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 57999998 7889999999999995 111 248999999999999877655 22233334444444
Q ss_pred ----CChHHHHHHHHHh
Q 014316 413 ----SSSSELADQLLVN 425 (427)
Q Consensus 413 ----~~~~~la~~l~~~ 425 (427)
.+.+.|+++|.++
T Consensus 125 ~~~~~~~~~L~~~i~~l 141 (167)
T PF04101_consen 125 DESELNPEELAEAIEEL 141 (167)
T ss_dssp ECCC-SCCCHHHHHHCH
T ss_pred CcccCCHHHHHHHHHHH
Confidence 2256688877654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.83 Score=45.18 Aligned_cols=70 Identities=14% Similarity=0.048 Sum_probs=47.5
Q ss_pred CEEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
+..+++.|.++ +.+..+++++. ..++.+.|. .+-.++..+++.||++|.. .++ .+==|-|+|+|+|+-
T Consensus 210 ~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~-~sL~elaali~~a~l~I~n---DSG-----p~HlA~A~g~p~val 278 (322)
T PRK10964 210 GLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPK-LSLEQVARVLAGAKAVVSV---DTG-----LSHLTAALDRPNITL 278 (322)
T ss_pred CCeEEEeCCCHHHHHHHHHHHcc--CCcceecCC-CCHHHHHHHHHhCCEEEec---CCc-----HHHHHHHhCCCEEEE
Confidence 45666763344 33444444332 235777787 8899999999999999974 333 455588999999986
Q ss_pred cc
Q 014316 395 SY 396 (427)
Q Consensus 395 ~~ 396 (427)
-.
T Consensus 279 fG 280 (322)
T PRK10964 279 YG 280 (322)
T ss_pred EC
Confidence 43
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.14 E-value=2.1 Score=44.75 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=47.8
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEe----
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF---- 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~---- 412 (427)
++.+.+ |+++.+ +|...++..+. +++ | .++++||+++|+|+|+-...+ ....+.+. +.|+-+
T Consensus 324 ~~~v~~-w~pQ~~---iL~h~~v~~fv---tHg-G-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 324 MGLVVP-WCDQLK---VLCHSSVGGFW---THC-G-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred CEEEec-cCCHHH---HhccCccceEE---ecC-c-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc
Confidence 666665 788754 56667774332 333 1 238999999999999987443 33334332 445554
Q ss_pred -----CChHHHHHHHHHhc
Q 014316 413 -----SSSSELADQLLVNA 426 (427)
Q Consensus 413 -----~~~~~la~~l~~~~ 426 (427)
-+.++++++++++.
T Consensus 395 ~~~~~~~~~~l~~av~~vl 413 (459)
T PLN02448 395 GEETLVGREEIAELVKRFM 413 (459)
T ss_pred ccCCcCcHHHHHHHHHHHh
Confidence 14578888887764
|
|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.11 Score=54.11 Aligned_cols=77 Identities=10% Similarity=-0.128 Sum_probs=50.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHH---HHHHH--HHHHHhccCCEEEEcC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFV---SIYRW--IEKYYGKMANGCLCVT 174 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~---~~~~~--~e~~~~~~ad~vi~vS 174 (427)
..||+||.|. ..+..+|.+++...|+|...+-|.++-+-+..+.-.+..+. ++... .|...++.||.|||-|
T Consensus 400 ~~PdlI~GnY---sDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST 476 (550)
T PF00862_consen 400 GKPDLIIGNY---SDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITST 476 (550)
T ss_dssp S--SEEEEEH---HHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESS
T ss_pred CCCcEEEecc---CcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcc
Confidence 6899999998 88888899999999999999999886543333222333332 22222 3567888999999987
Q ss_pred HHHHH
Q 014316 175 QAMQH 179 (427)
Q Consensus 175 ~~~~~ 179 (427)
.....
T Consensus 477 ~QEI~ 481 (550)
T PF00862_consen 477 YQEIA 481 (550)
T ss_dssp HHHHH
T ss_pred hHhhc
Confidence 66553
|
4.1.13 from EC in the following reaction: |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=2.6 Score=43.72 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=38.4
Q ss_pred HHHHHHcCC-CcEEE-ecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 332 EEKIRRLRL-KRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 332 ~~~~~~l~l-~~V~f-~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
+++.+.+.- .++++ ... .+..++..++++||++|-. -.+ .++=|+++|+|+|+-...
T Consensus 297 ~~l~~~~~~~~~~~vi~~~-~~~~e~~~iIs~~dl~ig~---RlH-----a~I~a~~~gvP~i~i~Y~ 355 (426)
T PRK10017 297 LNLRQHVSDPARYHVVMDE-LNDLEMGKILGACELTVGT---RLH-----SAIISMNFGTPAIAINYE 355 (426)
T ss_pred HHHHHhcccccceeEecCC-CChHHHHHHHhhCCEEEEe---cch-----HHHHHHHcCCCEEEeeeh
Confidence 445555543 23333 333 4566888999999999952 222 578899999999998743
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=95.82 E-value=2 Score=41.87 Aligned_cols=60 Identities=23% Similarity=0.208 Sum_probs=40.6
Q ss_pred CChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 326 PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 326 ~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.+.+..+++.+.+.-. .+ +.. .+.+++..++++||++|.- ..+ .++=|+.+|+|+|+-..
T Consensus 217 ~D~~~~~~l~~~~~~~~~i--~~~-~~~~e~~~~i~~~~~vI~~---RlH-----~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 217 QDLPLARALRDQLLGPAEV--LSP-LDPEELLGLFASARLVIGM---RLH-----ALILAAAAGVPFVALSY 277 (298)
T ss_pred hhHHHHHHHHHhcCCCcEE--Eec-CCHHHHHHHHhhCCEEEEe---chH-----HHHHHHHcCCCEEEeec
Confidence 3444445555554322 33 233 6788999999999999852 333 58889999999998753
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.062 Score=52.17 Aligned_cols=80 Identities=11% Similarity=0.085 Sum_probs=54.6
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhh-hhhh-----cC-----CCchHHHHHHHHHHHHhcc
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL-LSLS-----LG-----RRSHFVSIYRWIEKYYGKM 166 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~-~~~~-----~~-----~~~~~~~~~~~~e~~~~~~ 166 (427)
...+.|++|+.+ ..-+.+++.+++..+|.|+++|-|+. |+- .... .- -+..+.+++..+-+.+++.
T Consensus 169 ~lP~advyHsvs--tGyAgl~g~~~k~~~g~P~lLTEHGI-Y~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~ 245 (268)
T PF11997_consen 169 PLPKADVYHSVS--TGYAGLLGALAKYRYGRPFLLTEHGI-YTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRA 245 (268)
T ss_pred cCCCCCEEecCC--ccHHHHHHHHHHHHhCCCEEEecCCc-cHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 346889999998 23344557788888999999999999 521 1110 10 1122244566677888999
Q ss_pred CCEEEEcCHHHHHH
Q 014316 167 ANGCLCVTQAMQHE 180 (427)
Q Consensus 167 ad~vi~vS~~~~~~ 180 (427)
||.|+++++..++.
T Consensus 246 Ad~I~~l~~~n~~~ 259 (268)
T PF11997_consen 246 ADRITPLYEYNREW 259 (268)
T ss_pred hCeecccchhhHHH
Confidence 99999999976643
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.037 Score=45.01 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=59.7
Q ss_pred EEEEeC-CCChHHHHHHHHHcCCCcEEE--ecCCCCccc--HHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 319 FIITGK-GPDKESYEEKIRRLRLKRVAF--RTMWLSAED--YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 319 l~i~G~-G~~~~~~~~~~~~l~l~~V~f--~g~~~~~~~--~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
+.|+|+ ......+++.+++.|.+.+.+ .+. ..... ++..++.+|++|++...-+....-.+--+|-..|+|++-
T Consensus 2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~-~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGG-DEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCC-CccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 456665 567789999999999877777 333 34444 899999999999974433444444456677888999999
Q ss_pred eccCccccc
Q 014316 394 VSYSCIEEL 402 (427)
Q Consensus 394 s~~~g~~e~ 402 (427)
++..+...+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665543
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.072 Score=58.71 Aligned_cols=144 Identities=16% Similarity=0.159 Sum_probs=100.0
Q ss_pred cCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~ 330 (427)
+.++ .+.++++-|+...|.... ++..+..+.+-. +.+........+++.|+- |....
T Consensus 539 ldp~-sLfd~qakR~heYKRq~LNil~~i~ry~~i~--------------------~~p~~~~~P~~~IFaGKAaP~y~~ 597 (815)
T PRK14986 539 VNPK-ALFDVQIKRIHEYKRQLMNVLHVITRYNRIK--------------------ADPDAKWVPRVNIFAGKAASAYYM 597 (815)
T ss_pred cCcc-cceeeeehhhhhhhhhhHHHhhhHHHHHHHH--------------------hCCCcCCCCeEEEEeecCCCCcHH
Confidence 3444 357899999999999988 777776665431 111111123789999964 33332
Q ss_pred HHHHHHHc-----------CC-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRL-----------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l-----------~l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~ 395 (427)
.++.++.. .+ + +|.|+.. .+.+-...++.+||+.... |..+ |..|..=+=+|..|.+.++|-
T Consensus 598 aK~iIk~I~~va~~in~Dp~v~~~lkVVFlen-Y~vslAe~lipg~Dv~eqi--s~ag~EASGTsnMK~alNGaLtlgtl 674 (815)
T PRK14986 598 AKHIIHLINDVAKVINNDPQIGDKLKVVFIPN-YSVSLAQLIIPAADLSEQI--SLAGTEASGTSNMKFALNGALTIGTL 674 (815)
T ss_pred HHHHHHHHHHHHHHhccChhhcCceeEEEeCC-CCHHHHHHhhhhhhhhhhC--CCCCccccCcchhhHHhcCceeeecc
Confidence 23322221 12 1 5899887 7778888999999999863 2333 888888888999999999999
Q ss_pred cCccccceec--CCcEEEeC-ChHHHHH
Q 014316 396 YSCIEELVKV--DKNGLLFS-SSSELAD 420 (427)
Q Consensus 396 ~~g~~e~v~~--~~~G~l~~-~~~~la~ 420 (427)
.|...|+.++ ++||++++ +.++.++
T Consensus 675 DG~nvEi~e~vG~eN~~~fG~~~~ev~~ 702 (815)
T PRK14986 675 DGANVEMLEHVGEENIFIFGNTAEEVEA 702 (815)
T ss_pred CCchhHHHHhcCCCcEEEeCCCHHHHHH
Confidence 9999998876 88999994 4455443
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.062 Score=42.66 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=42.9
Q ss_pred CceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEE
Q 014316 54 PSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD 133 (427)
Q Consensus 54 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~ 133 (427)
.|++++.+|..+. ..-..++ .+...+.+++.++.+ ++.||||.|+..+..+.- +.+.++..|.+.|+|
T Consensus 14 ngLKVYYlP~~~~--~~~~t~P--------t~~~~~pl~R~Ilir-E~I~IVHgH~a~S~l~hE-~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--YNQCTLP--------TLFGSFPLLRNILIR-ERIDIVHGHQAFSTLCHE-AILHARTMGLKTVFT 81 (90)
T ss_pred CCeEEEeecchhh--hcCcchH--------HHHHhhHHHHHHHHH-cCeeEEEeehhhhHHHHH-HHHHHHhCCCcEEee
Confidence 4899999994321 1111111 112222233333332 899999999833322222 567788899999999
Q ss_pred eccc
Q 014316 134 WHNF 137 (427)
Q Consensus 134 ~h~~ 137 (427)
=|.+
T Consensus 82 DHSL 85 (90)
T PF08288_consen 82 DHSL 85 (90)
T ss_pred cccc
Confidence 9976
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.29 E-value=4.5 Score=42.29 Aligned_cols=77 Identities=12% Similarity=0.149 Sum_probs=50.5
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~~-- 413 (427)
+++.+.+ |+++ .++|+..++..+. +++- .+.++||+++|+|+|+-..-+ ....+.+. +.|+-+.
T Consensus 317 ~~~~i~~-W~PQ---~~iL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLK-WSPQ---LQVLSNKAIGCFM---THCG--WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeC-CCCH---HHHhCCCccceEE---ecCc--cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4677776 8997 4577777765553 4431 138999999999999986322 33344332 4555541
Q ss_pred ------ChHHHHHHHHHhc
Q 014316 414 ------SSSELADQLLVNA 426 (427)
Q Consensus 414 ------~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 388 ~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVM 406 (449)
T ss_pred ccCCcccHHHHHHHHHHHh
Confidence 4588888888764
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.14 Score=55.93 Aligned_cols=133 Identities=15% Similarity=0.068 Sum_probs=97.2
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHHHH---
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEE--- 333 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~~~--- 333 (427)
.+.++++-|+...|.....+.-+..+.+.+.+ ...|.+.+++.|+- |.....++
T Consensus 487 ~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~----------------------d~~prv~~iFaGKAhP~y~~aK~iIk 544 (750)
T COG0058 487 ALFDGQARRIHEYKRQLLNLLDIERLYRILKE----------------------DWVPRVQIIFAGKAHPADYAAKEIIK 544 (750)
T ss_pred cceeeeehhhhhhhhhHHhHhhHHHHHHHHhc----------------------CCCCceEEEEeccCCCcchHHHHHHH
Confidence 35899999999999887776655555544210 12577888999964 33222222
Q ss_pred ----HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccccee--cC
Q 014316 334 ----KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK--VD 406 (427)
Q Consensus 334 ----~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~--~~ 406 (427)
.++..+. .+|.|+.. .+..-...++.+||+-..-+ ....|..|..=+=+|..|.+.|+|-.|...|+.+ .+
T Consensus 545 ~I~~~a~~in~~lkVvFl~n-YdvslA~~iipa~Dvweqis-~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~ 622 (750)
T COG0058 545 LINDVADVINNKLKVVFLPN-YDVSLAELLIPAADVWEQIP-TAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGG 622 (750)
T ss_pred HHHHHHHhhcccceEEEeCC-CChhHHHhhcccccccccCC-CCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCC
Confidence 2333333 36899887 77778888999999998631 1233888888888999999999999999999987 89
Q ss_pred CcEEEeCC
Q 014316 407 KNGLLFSS 414 (427)
Q Consensus 407 ~~G~l~~~ 414 (427)
+||+++++
T Consensus 623 ~N~~~fG~ 630 (750)
T COG0058 623 ENGWIFGE 630 (750)
T ss_pred CceEEeCC
Confidence 99999954
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.91 E-value=6 Score=41.71 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=33.8
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.++...+ |+++ .++|+.+++..+. +++ | -+.++||+.+|+|+|+...
T Consensus 345 ~g~~v~~-w~PQ---~~iL~h~~v~~fv---tH~-G-~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 345 KGLIIRG-WAPQ---VLILDHQATGGFV---THC-G-WNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred CCEEEec-CCCH---HHHhccCccceee---ecC-c-chHHHHHHHcCCCeeeccc
Confidence 3677766 7888 5678888774443 333 1 2389999999999999874
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.16 Score=56.16 Aligned_cols=142 Identities=15% Similarity=0.146 Sum_probs=98.7
Q ss_pred CCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESY 331 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~ 331 (427)
.++. +..+++-|+...|.... ++..+..+.+- .+.+........|++.|+- |.....
T Consensus 527 dp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~a 585 (797)
T cd04300 527 DPDS-LFDVQVKRIHEYKRQLLNVLHIIHLYNRI--------------------KENPNADIVPRTFIFGGKAAPGYYMA 585 (797)
T ss_pred CCCc-cEEEEeeechhhhhhhhHHHhhHHHHHHH--------------------HhCCCcCCCCeEEEEeccCCCCcHHH
Confidence 4443 58899999999999988 77776666543 1111112223789999964 332222
Q ss_pred HHHHHH---c--------CCC---cEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEecc
Q 014316 332 EEKIRR---L--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 332 ~~~~~~---l--------~l~---~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~ 396 (427)
++.++. + .+. +|.|+.. .+..-...++.+||+..-- |.. .|..|..=+=+|..|.+.++|-.
T Consensus 586 K~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqi--s~ag~EASGTsnMK~~lNGaltlgtlD 662 (797)
T cd04300 586 KLIIKLINAVADVVNNDPDVGDKLKVVFLPN-YNVSLAEKIIPAADLSEQI--STAGKEASGTGNMKFMLNGALTIGTLD 662 (797)
T ss_pred HHHHHHHHHHHHHhccChhcCCceEEEEeCC-CChHHHHHhhhhhhhhhhC--CCCCccccCCchhhHHhcCceeeeccc
Confidence 222222 1 121 5999887 7788888999999999863 233 38888888889999999999999
Q ss_pred Cccccceec--CCcEEEeCC-hHHHH
Q 014316 397 SCIEELVKV--DKNGLLFSS-SSELA 419 (427)
Q Consensus 397 ~g~~e~v~~--~~~G~l~~~-~~~la 419 (427)
|...|+.++ ++|+++|+. .++..
T Consensus 663 GanvEi~e~vG~eN~fiFG~~~~ev~ 688 (797)
T cd04300 663 GANVEIAEEVGEENIFIFGLTAEEVE 688 (797)
T ss_pred chhHHHHHHhCcCcEEEeCCCHHHHH
Confidence 999998877 889999954 45544
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.11 Score=57.06 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=99.9
Q ss_pred cCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~ 330 (427)
+.++. +..+++-|+...|.... ++..+..+.+- .+.+........|++.|+- |....
T Consensus 523 ldp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 581 (794)
T TIGR02093 523 VDPNS-IFDVQVKRLHEYKRQLLNVLHVIYLYNRI--------------------KEDPPKDIVPRTVIFGGKAAPGYHM 581 (794)
T ss_pred cCccc-cchhhheechhhhHHHHHHhhhHHHHHHH--------------------HhCCCcCCCCeEEEEEecCCCCcHH
Confidence 34443 47889999999999888 77777666543 1111112223689999964 33222
Q ss_pred HHHHH---HHcC--------C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKI---RRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~---~~l~--------l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~ 395 (427)
.++.+ .... + + +|.|+.. .+..-...++.+||+..-- |..+ |..|..=+=+|..|.+.|+|-
T Consensus 582 aK~iIklI~~va~~iN~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqi--stag~EASGTsnMK~alNGaltlgtl 658 (794)
T TIGR02093 582 AKLIIKLINSVAEVVNNDPAVGDKLKVVFVPN-YNVSLAELIIPAADLSEQI--STAGKEASGTGNMKFMLNGALTIGTL 658 (794)
T ss_pred HHHHHHHHHHHHHHhccChhhCCceeEEEeCC-CChHHHHHhhhhhhhhhhC--CCCCccccCcchhHHHhcCcceeecc
Confidence 23222 2222 2 1 5999887 7788888999999999863 2333 888888888999999999999
Q ss_pred cCccccceec--CCcEEEeC-ChHHHHH
Q 014316 396 YSCIEELVKV--DKNGLLFS-SSSELAD 420 (427)
Q Consensus 396 ~~g~~e~v~~--~~~G~l~~-~~~~la~ 420 (427)
.|...|+.++ ++|+++|+ +.++..+
T Consensus 659 DGanvEi~e~vG~eN~fiFG~~~~ev~~ 686 (794)
T TIGR02093 659 DGANVEIREEVGAENIFIFGLTVEEVEA 686 (794)
T ss_pred cchhHHHHHHhCcccEEEcCCCHHHHHH
Confidence 9999998877 88999994 4455443
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.23 E-value=8.1 Score=40.28 Aligned_cols=76 Identities=13% Similarity=0.243 Sum_probs=49.4
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC---
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS--- 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~--- 413 (427)
++.+.+ |+++. ++|+...+..+. +++- -+.++||+++|+|+|+-..-+ ....+ +.-+.|+.++
T Consensus 312 g~~v~~-W~PQ~---~iL~H~~v~~Fv---tHcG--~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGG-WVQQP---LILDHPSIGCFV---NHCG--PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeec-cCCHH---HHhcCCccCeEE---ccCC--chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 565545 78884 467777775553 5441 138999999999999986322 23333 2345676662
Q ss_pred ----ChHHHHHHHHHhc
Q 014316 414 ----SSSELADQLLVNA 426 (427)
Q Consensus 414 ----~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 383 ~~~~~~~~l~~ai~~~m 399 (442)
T PLN02208 383 TGWFSKESLSNAIKSVM 399 (442)
T ss_pred CCcCcHHHHHHHHHHHh
Confidence 4578888887754
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.11 Score=57.20 Aligned_cols=143 Identities=15% Similarity=0.186 Sum_probs=98.8
Q ss_pred cCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~ 330 (427)
+.++ .+.++++-|+...|.... ++..+..+.+- .+.+........|++.|+- |....
T Consensus 525 ldp~-slfdvq~kR~heYKRq~Lnil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 583 (798)
T PRK14985 525 INPQ-AIFDVQIKRLHEYKRQHLNLLHILALYKEI--------------------RENPQADRVPRVFLFGAKAAPGYYL 583 (798)
T ss_pred cCch-hcchhhHhhhhhhhhhhhHhhhhHHHHHHH--------------------HhCCCcCCCCeEEEEeecCCCCcHH
Confidence 3444 357889999999999888 77777666553 1111112223789999964 33332
Q ss_pred HHHH---HHHcC--------C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEK---IRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~---~~~l~--------l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~ 395 (427)
.++. +..+. + + +|.|+.. .+..-...++.+||+..-- |..+ |..|..=+=+|..|.+.++|-
T Consensus 584 aK~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~lipaaDvseqi--s~ag~EASGTsnMK~amNGaLtlgtl 660 (798)
T PRK14985 584 AKNIIFAINKVAEVINNDPLVGDKLKVVFLPD-YCVSAAELLIPAADISEQI--STAGKEASGTGNMKLALNGALTVGTL 660 (798)
T ss_pred HHHHHHHHHHHHHHhcCChhhCCceeEEEeCC-CChHHHHHHhhhhhhhhhC--CCCCccccCcchhHHHhcCceeeecc
Confidence 2322 22221 1 1 5899887 7788888999999999863 2333 888888888999999999999
Q ss_pred cCccccceec--CCcEEEeCC-hHHHH
Q 014316 396 YSCIEELVKV--DKNGLLFSS-SSELA 419 (427)
Q Consensus 396 ~~g~~e~v~~--~~~G~l~~~-~~~la 419 (427)
.|...|+.++ ++||++++. .+++.
T Consensus 661 DGanvEi~e~vG~eN~f~fG~~~~ev~ 687 (798)
T PRK14985 661 DGANVEIAEQVGEENIFIFGHTVEQVK 687 (798)
T ss_pred cchHHHHHHHhCcCcEEEeCCCHHHHH
Confidence 9999988875 889999954 45443
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.73 Score=50.33 Aligned_cols=139 Identities=15% Similarity=0.126 Sum_probs=86.0
Q ss_pred CeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKI 335 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~~~~~ 335 (427)
.+..+++-|+...|.... ++..+..+.+-. ..+......+.+++.|+- |....-++.+
T Consensus 444 slfdv~~rR~heYKRq~LniL~ii~~y~rik--------------------~~p~~~~~Pv~~IFaGKAhP~d~~gK~iI 503 (713)
T PF00343_consen 444 SLFDVQARRFHEYKRQLLNILHIIDRYNRIK--------------------NNPNKKIRPVQFIFAGKAHPGDYMGKEII 503 (713)
T ss_dssp SEEEEEES-SCCCCTHHHHHHHHHHHHHHHH--------------------HSTTSCCS-EEEEEE----TT-HHHHHHH
T ss_pred hhhhhhhhhcccccccCcccccHHHHHHHHH--------------------hcccCCCCCeEEEEeccCCCCcHHHHHHH
Confidence 457899999999999877 444444444320 011111223889999974 3333333333
Q ss_pred HH---c--------CCC---cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccc
Q 014316 336 RR---L--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 401 (427)
Q Consensus 336 ~~---l--------~l~---~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e 401 (427)
+. + .+. +|.|+.- .+..-...++.++|+-...++ ...|..|..=.=+|..|.+.++|-.|...|
T Consensus 504 k~I~~va~~in~Dp~v~~~lkVvFlen-YdvslA~~lipg~DVwln~p~-~p~EASGTSgMK~~~NGaL~lstlDG~niE 581 (713)
T PF00343_consen 504 KLINNVAEVINNDPEVGDRLKVVFLEN-YDVSLAEKLIPGVDVWLNIPT-RPKEASGTSGMKAAMNGALNLSTLDGWNIE 581 (713)
T ss_dssp HHHHHHHHHHCT-TTTCCGEEEEEETT--SHHHHHHHGGG-SEEEE----TTSSSS-SHHHHHHHTT-EEEEESSTCHHH
T ss_pred HHHHHHHHHHhcChhhccceeEEeecC-CcHHHHHHHhhhhhhhhhCCC-CCccccCCCcchhhcCCCeEEecccchhHH
Confidence 22 1 222 5899887 777788899999999997411 233999999999999999999999999999
Q ss_pred ceec--CCcEEEeCC-hHHH
Q 014316 402 LVKV--DKNGLLFSS-SSEL 418 (427)
Q Consensus 402 ~v~~--~~~G~l~~~-~~~l 418 (427)
+.+. ++|.++|+. .++.
T Consensus 582 i~e~vG~eN~fiFG~~~~ev 601 (713)
T PF00343_consen 582 IAEAVGEENIFIFGLTAEEV 601 (713)
T ss_dssp HHHHH-GGGSEEES-BHHHH
T ss_pred HHHhcCCCcEEEcCCCHHHH
Confidence 8754 568899943 4443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.17 Score=47.76 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=60.4
Q ss_pred CCCCeEEEEEeecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHH
Q 014316 255 PNRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KES 330 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~ 330 (427)
.+++.+++..|.-.+.|.. +...+.+..+.+. ...+++.|...+ .+.
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~-----------------------------~~~vvl~g~~~~~~~~~ 153 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKER-----------------------------GYRVVLLGGPEEQEKEI 153 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCC-----------------------------T-EEEE--SSHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhh-----------------------------CceEEEEccchHHHHHH
Confidence 4456677777765666654 3466666655432 277888887754 222
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.++..+...-..+.+.|. .+-.++..+++.||++|.+ ..+ .+==|.|.|+|+|+--
T Consensus 154 ~~~~~~~~~~~~~~~~~~-~~l~e~~ali~~a~~~I~~---Dtg-----~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 154 ADQIAAGLQNPVINLAGK-TSLRELAALISRADLVIGN---DTG-----PMHLAAALGTPTVALF 209 (247)
T ss_dssp HHHHHTTHTTTTEEETTT-S-HHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTT--EEEEE
T ss_pred HHHHHHhcccceEeecCC-CCHHHHHHHHhcCCEEEec---CCh-----HHHHHHHHhCCEEEEe
Confidence 223333222125888887 8899999999999999985 333 4566889999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=92.91 E-value=1.5 Score=42.20 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=61.5
Q ss_pred EEEEEeecCCC-------CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHH
Q 014316 260 LVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KES 330 (427)
Q Consensus 260 ~i~~~g~~~~~-------K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~ 330 (427)
.|++..+..++ .+...+++.+..+.+. .|++.++|-=...+ ...
T Consensus 119 ~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~---------------------------~p~~~lvvK~HP~~~~~~~ 171 (269)
T PF05159_consen 119 YVLVPLQVENDSQIRYHSPSQADFLDMLESFAKE---------------------------NPDAKLVVKPHPDERGGNK 171 (269)
T ss_pred EEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHH---------------------------CCCCEEEEEECchhhCCCC
Confidence 66777776665 2345556666665554 66777766443210 001
Q ss_pred HHHHHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
. ....++ +..++.+... .-++.+++..||.++.. ++ .+-+||+.+|+||++-.
T Consensus 172 ~-~~~~~~~~~~~~~~~~~---~~~~~~Ll~~s~~Vvti---nS-----tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 172 Y-SYLEELPNLPNVVIIDD---DVNLYELLEQSDAVVTI---NS-----TVGLEALLHGKPVIVFG 225 (269)
T ss_pred h-hHhhhhhcCCCeEEECC---CCCHHHHHHhCCEEEEE---CC-----HHHHHHHHcCCceEEec
Confidence 1 222222 3456666554 67889999999999974 33 38899999999999965
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=92.39 E-value=16 Score=38.19 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=49.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC----ccccceec-CCcEEEe--C
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKV-DKNGLLF--S 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~~-~~~G~l~--~ 413 (427)
+|+.+.+ |+++. ++|+..++..+. +++ | -++++||+.+|+|+|+.... .....+.+ -+.|+-+ -
T Consensus 328 ~~~~v~~-w~PQ~---~iL~h~~v~~fv---tH~-G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (448)
T PLN02562 328 KQGKVVS-WAPQL---EVLKHQAVGCYL---THC-G-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGF 398 (448)
T ss_pred cCEEEEe-cCCHH---HHhCCCccceEE---ecC-c-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCC
Confidence 4676665 78884 567777765443 443 1 23899999999999988633 23334433 3556666 3
Q ss_pred ChHHHHHHHHHhc
Q 014316 414 SSSELADQLLVNA 426 (427)
Q Consensus 414 ~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 399 ~~~~l~~~v~~~l 411 (448)
T PLN02562 399 GQKEVEEGLRKVM 411 (448)
T ss_pred CHHHHHHHHHHHh
Confidence 4688888887653
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=91.93 E-value=2.2 Score=38.42 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=37.4
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhc------CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLR------RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~------~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
.+||+|+++.|..--. ..+++++. +.|+|+- -.+. +....+.-.+ .+++.||.+++-
T Consensus 91 ~rPdvii~nGpg~~vp---~~~~~~l~~~~~~~~~kiIyI-ES~a------Rv~~lSlTGk-------lly~~aD~f~VQ 153 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVP---VCLAAKLLRLLGLRGSKIIYI-ESFA------RVKTLSLTGK-------LLYPFADRFIVQ 153 (170)
T ss_pred hCCCEEEEcCCceeeH---HHHHHHHHHHhhccCCcEEEE-Eeee------ecCCCchHHH-------HHHHhCCEEEEc
Confidence 7899999998654332 33444555 8887761 1110 0112222222 234469999998
Q ss_pred CHHHHHHH
Q 014316 174 TQAMQHEL 181 (427)
Q Consensus 174 S~~~~~~l 181 (427)
-+++++.+
T Consensus 154 W~~l~~~y 161 (170)
T PF08660_consen 154 WEELAEKY 161 (170)
T ss_pred CHHHHhHC
Confidence 88877553
|
|
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=89.98 E-value=24 Score=35.87 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=39.1
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.+..+.+ +++++...+|..||+-++ .+|. +.+=|.-+|+|.|=.-++
T Consensus 245 ~l~~lPF-~~Q~~yD~LLw~cD~NfV-----RGED---SfVRAqwAgkPFvWhIYp 291 (374)
T PF10093_consen 245 TLHVLPF-VPQDDYDRLLWACDFNFV-----RGED---SFVRAQWAGKPFVWHIYP 291 (374)
T ss_pred EEEECCC-CCHHHHHHHHHhCccceE-----ecch---HHHHHHHhCCCceEecCc
Confidence 4899998 999999999999999984 4454 388999999999865444
|
The function is unknown. |
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=88.31 E-value=21 Score=33.06 Aligned_cols=48 Identities=27% Similarity=0.356 Sum_probs=37.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.++.......+.+++..+++++|++|.- ..+ ..+=|+++|+|+|+-+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~Is~---RlH-----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQADLVISM---RLH-----GAILALSLGVPVIAISY 284 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcCCEEEec---CCH-----HHHHHHHcCCCEEEEec
Confidence 3455555558899999999999999963 334 57889999999998654
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=87.93 E-value=4.1 Score=42.60 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=52.0
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC----cccccee-cCCcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVK-VDKNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~-~~~~G~l~~-- 413 (427)
.++...+ |+++. ++|+.+++..+. +++. -+.++||+++|+|+|+.... .....+. +-+.|+.++
T Consensus 334 ~g~~v~~-W~PQ~---~iL~H~~v~~Fv---TH~G--~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 404 (451)
T PLN03004 334 KGMVVKS-WAPQV---PVLNHKAVGGFV---THCG--WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES 404 (451)
T ss_pred CcEEEEe-eCCHH---HHhCCCccceEe---ccCc--chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence 3577656 78885 478889985543 4431 13899999999999998632 2333443 346776662
Q ss_pred -----ChHHHHHHHHHhc
Q 014316 414 -----SSSELADQLLVNA 426 (427)
Q Consensus 414 -----~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 405 ~~~~~~~e~l~~av~~vm 422 (451)
T PLN03004 405 ETGFVSSTEVEKRVQEII 422 (451)
T ss_pred cCCccCHHHHHHHHHHHh
Confidence 4588999888764
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=87.73 E-value=11 Score=33.85 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=45.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
..+|++++.+--....+ ..+...+.++|.++.+|.-.+ ....+-+..+-+. +.+..-+..-.||.|++.|+.-++
T Consensus 58 ~~~dll~aTsmldLa~l--~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~--~~~~ni~saLaAD~v~FNS~~nr~ 132 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATL--RGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQ--YGMNNIYSALAADRVVFNSAFNRD 132 (168)
T ss_pred cCCCEEEeeccccHHHH--HhhccCCCCCCEEEEEecCcc-cCCCCCCcccccc--HHHHHHHHHHhceeeeecchhhHH
Confidence 67899999983222221 233345678999999997532 1111112211111 122222333369999999999888
Q ss_pred HHHH
Q 014316 180 ELAQ 183 (427)
Q Consensus 180 ~l~~ 183 (427)
.+.+
T Consensus 133 sFL~ 136 (168)
T PF12038_consen 133 SFLD 136 (168)
T ss_pred HHHH
Confidence 7765
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=87.10 E-value=38 Score=34.59 Aligned_cols=70 Identities=19% Similarity=0.193 Sum_probs=45.3
Q ss_pred EEEeCCCChHHHHHHHHHcC-CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 320 IITGKGPDKESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 320 ~i~G~G~~~~~~~~~~~~l~-l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
+-.+.-++..-.++.+.... .+++.+.-- -..+++...++++|+.|-- -.+ .++=||+.|+|+|+-.+..
T Consensus 244 ~~~~~s~d~~va~~ia~~~~~~~~i~~~~d-~~~~~~~~~l~~~dl~Vg~---R~H-----saI~al~~g~p~i~i~Y~~ 314 (385)
T COG2327 244 IDYGASDDLAVADAIAQLVLDSAEILVSSD-EYAEELGGILAACDLIVGM---RLH-----SAIMALAFGVPAIAIAYDP 314 (385)
T ss_pred eeccccchhHHHHHHHhhcCCccceEeecc-hHHHHHHHHhccCceEEee---hhH-----HHHHHHhcCCCeEEEeecH
Confidence 33334344455555555543 357777654 1136778899999999852 222 5788999999999987543
|
|
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=86.45 E-value=0.98 Score=38.39 Aligned_cols=50 Identities=16% Similarity=0.153 Sum_probs=31.0
Q ss_pred EEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 9 VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 9 v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
++..+..|.-.=+.-.+.+|.++ ||+|.+.+... ..+..+..|++++.++
T Consensus 3 i~~~Gt~Ghv~P~lala~~L~~r-Gh~V~~~~~~~---~~~~v~~~Gl~~~~~~ 52 (139)
T PF03033_consen 3 IATGGTRGHVYPFLALARALRRR-GHEVRLATPPD---FRERVEAAGLEFVPIP 52 (139)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHT-T-EEEEEETGG---GHHHHHHTT-EEEESS
T ss_pred EEEcCChhHHHHHHHHHHHHhcc-CCeEEEeeccc---ceecccccCceEEEec
Confidence 44444333333355567788886 99999888654 2334466799999988
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=86.04 E-value=2.6 Score=40.91 Aligned_cols=61 Identities=16% Similarity=0.323 Sum_probs=43.8
Q ss_pred EEEeCC-CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 320 IITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 320 ~i~G~G-~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
+++|.+ |....+.+.++.. +++.+.-. .+++..++++||+.+.. =|++++|+...|+|.++
T Consensus 190 iV~gs~~p~l~~l~k~~~~~--~~i~~~~~---~~dma~LMke~d~aI~A--------aGstlyEa~~lgvP~l~ 251 (318)
T COG3980 190 IVVGSSNPTLKNLRKRAEKY--PNINLYID---TNDMAELMKEADLAISA--------AGSTLYEALLLGVPSLV 251 (318)
T ss_pred EEecCCCcchhHHHHHHhhC--CCeeeEec---chhHHHHHHhcchheec--------cchHHHHHHHhcCCceE
Confidence 344533 4445555555553 47877665 99999999999999962 35689999999999433
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=85.91 E-value=5.2 Score=36.52 Aligned_cols=82 Identities=12% Similarity=0.074 Sum_probs=37.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEE-ecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~-~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+++.-.....+.++ ..++.+|+|+++- -+-. .+.-...+.+.++.+.+.+..|.|.+.|+.+.
T Consensus 94 ~~P~~~i~~EtElWPnll---~~a~~~~ip~~LvNarls---------~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 94 WRPDLLIWVETELWPNLL---REAKRRGIPVVLVNARLS---------ERSFRRYRRFPFLFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp H--SEEEEES----HHHH---HH-----S-EEEEEE-----------------------HHHHHHGGG-SEEEESSHHHH
T ss_pred hCCCEEEEEccccCHHHH---HHHhhcCCCEEEEeeeec---------cccchhhhhhHHHHHHHHHhCCEEEECCHHHH
Confidence 689999988744444433 4456679997652 1111 01111122235567777888999999999999
Q ss_pred HHHHHhhCCe---EEEecC
Q 014316 179 HELAQNWGIK---ATVLYD 194 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n 194 (427)
+.+.+. |.+ +.+.-|
T Consensus 162 ~r~~~l-G~~~~~v~v~Gn 179 (186)
T PF04413_consen 162 ERFRKL-GAPPERVHVTGN 179 (186)
T ss_dssp HHHHTT-T-S--SEEE---
T ss_pred HHHHHc-CCCcceEEEeCc
Confidence 999775 544 555544
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=85.49 E-value=5.8 Score=41.62 Aligned_cols=76 Identities=17% Similarity=0.284 Sum_probs=45.8
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-C---ccccceecCCcEEEeC---
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-S---CIEELVKVDKNGLLFS--- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-~---g~~e~v~~~~~G~l~~--- 413 (427)
+|+.... |+|+. ++|+...+-++. +++ | -+.+.||+.+|+|+|+-.. | .....+++...|...+
T Consensus 323 ~n~~~~~-W~PQ~---~lL~hp~v~~fi---tHg-G-~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVK-WLPQN---DLLAHPRVKLFI---THG-G-LNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEES-S--HH---HHHTSTTEEEEE---ES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEec-cccch---hhhhcccceeee---ecc-c-cchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 3776655 89984 557666554442 444 2 2489999999999999873 3 2444555666777663
Q ss_pred -ChHHHHHHHHHh
Q 014316 414 -SSSELADQLLVN 425 (427)
Q Consensus 414 -~~~~la~~l~~~ 425 (427)
+.+++.++|.++
T Consensus 394 ~~~~~l~~ai~~v 406 (500)
T PF00201_consen 394 LTEEELRAAIREV 406 (500)
T ss_dssp -SHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 358888888775
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=83.15 E-value=7.3 Score=34.66 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=42.7
Q ss_pred hCCCcEEEEcCCCChhHHH-HHHHHHhh-c-CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 99 IASPDVFLVQNPPSVPTLV-AVKWASSL-R-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~-~~~~~~~~-~-~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
..+||+|++..|.. +.+ +..+..+. . ++|++.-+-|+.. . .. .|+...+|..++.|+
T Consensus 87 ~~~PD~IIsThp~~--~~~~l~~lk~~~~~~~~p~~tvvTD~~~-~-----H~------------~W~~~~~D~y~Vase 146 (169)
T PF06925_consen 87 EFQPDLIISTHPFP--AQVPLSRLKRRGRLPNIPVVTVVTDFDT-V-----HP------------FWIHPGVDRYFVASE 146 (169)
T ss_pred hcCCCEEEECCcch--hhhHHHHHHHhhcccCCcEEEEEcCCCC-C-----Cc------------CeecCCCCEEEECCH
Confidence 48999999988532 223 33333332 3 5776544445410 0 00 123467999999999
Q ss_pred HHHHHHHHhhCCe
Q 014316 176 AMQHELAQNWGIK 188 (427)
Q Consensus 176 ~~~~~l~~~~~~~ 188 (427)
.+++.+.+. |++
T Consensus 147 ~~~~~l~~~-Gi~ 158 (169)
T PF06925_consen 147 EVKEELIER-GIP 158 (169)
T ss_pred HHHHHHHHc-CCC
Confidence 999999874 665
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=82.87 E-value=65 Score=33.69 Aligned_cols=77 Identities=14% Similarity=0.227 Sum_probs=49.3
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEe---
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF--- 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~--- 412 (427)
+|....+ |+++.+ +|+..++..+. +++ |. +.++||+++|+|+|+....+ ....+.+. +.|+-+
T Consensus 324 ~~g~v~~-w~PQ~~---iL~h~~v~~fv---tH~-G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVK-WAPQKE---VLSHPAVGGFW---SHC-GW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEc-cCCHHH---HhCCCccCeee---ecC-ch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 3555555 899865 56665564332 333 12 38999999999999986332 33334333 677766
Q ss_pred CChHHHHHHHHHhc
Q 014316 413 SSSSELADQLLVNA 426 (427)
Q Consensus 413 ~~~~~la~~l~~~~ 426 (427)
-+.++++++++++.
T Consensus 395 ~~~~~v~~av~~lm 408 (451)
T PLN02410 395 LDRGAVERAVKRLM 408 (451)
T ss_pred ccHHHHHHHHHHHH
Confidence 24588998887763
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=82.56 E-value=19 Score=37.71 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=48.6
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceec-CCcEEEeC---
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKV-DKNGLLFS--- 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~-~~~G~l~~--- 413 (427)
+....+ |+++. ++|+.+++..+. +++ |. ++++|++++|+|+|+-...+ ....+.+ -+.|+.+.
T Consensus 325 ~g~v~~-w~PQ~---~iL~h~~vg~Fi---tH~-G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 325 QGVVLE-WSPQE---KILSHMAISCFV---THC-GW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred CeEEEe-cCCHH---HHhcCcCcCeEE---eeC-Cc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 433444 78885 578888755443 333 11 27999999999999987432 3334433 46776662
Q ss_pred -----ChHHHHHHHHHhc
Q 014316 414 -----SSSELADQLLVNA 426 (427)
Q Consensus 414 -----~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 396 ~~~~~~~~~l~~av~~~m 413 (456)
T PLN02210 396 VDGELKVEEVERCIEAVT 413 (456)
T ss_pred cCCcCCHHHHHHHHHHHh
Confidence 3578888888754
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=82.10 E-value=12 Score=39.39 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=49.3
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEeC-----
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS----- 413 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~~----- 413 (427)
+.+.+ |+++. ++|+...+..+. +++- -+.++||+++|+|+|+....+ ....+.+-+.|+.+.
T Consensus 341 ~vv~~-W~PQ~---~IL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVG-WVPQV---KILSHESVGGFL---THCG--WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeC-cCCHH---HHhcCcccceee---ecCC--cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 55545 78884 467777775443 4431 137999999999999986332 333444566777662
Q ss_pred ---ChHHHHHHHHHhc
Q 014316 414 ---SSSELADQLLVNA 426 (427)
Q Consensus 414 ---~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 412 ~~~~~e~i~~av~~vm 427 (472)
T PLN02670 412 GSFTSDSVAESVRLAM 427 (472)
T ss_pred CcCcHHHHHHHHHHHh
Confidence 3578888888764
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=80.22 E-value=20 Score=37.70 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=45.5
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cc-cceecCCcEEEeC---
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IE-ELVKVDKNGLLFS--- 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~-e~v~~~~~G~l~~--- 413 (427)
+..+.+ |+++. ++|+...+..+. +++ |. +.++||+++|+|+|+-...+ .. .+++.-+.|+.+.
T Consensus 341 rg~v~~-w~PQ~---~iL~h~~vg~fv---tH~-G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 411 (475)
T PLN02167 341 RGLVCG-WAPQV---EILAHKAIGGFV---SHC-GW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY 411 (475)
T ss_pred Ceeeec-cCCHH---HHhcCcccCeEE---eeC-Cc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc
Confidence 344554 78874 466665543332 332 11 27999999999999986332 22 2244445566551
Q ss_pred --------ChHHHHHHHHHhc
Q 014316 414 --------SSSELADQLLVNA 426 (427)
Q Consensus 414 --------~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 412 ~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 412 VSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccCCcccHHHHHHHHHHHh
Confidence 3578888887753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 54/420 (12%), Positives = 126/420 (30%), Gaps = 126/420 (30%)
Query: 24 QALSLARQMS---LEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80
L +Q++ E+ + G P +P+I+ H + + + L
Sbjct: 32 VGTELGKQLAERGHEIHFITSGL--PFRLNKVYPNIYFH---EVTVNQYSVFQYPPYDLA 86
Query: 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFG 138
L + + + + D+ V +P + A + + H
Sbjct: 87 LASKMAEV--------AQRENLDILHVHYA--IPHAICAYLAKQMIGERIKIVTTLHGTD 136
Query: 139 YTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLY--- 193
T+L + ++ + ++ V+ ++ +E + +Y
Sbjct: 137 ITVLGSD--------PSLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFI 188
Query: 194 DQPPEFFHPTSLEE-KHELFCRLNK--ILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250
D + + + K E ++ ++H +SN K +
Sbjct: 189 D--ERVYFKRDMTQLKKEYGISESEKILIH--------ISN-FRKVK----------RVQ 227
Query: 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 310
+++A A I+ E D+
Sbjct: 228 D------------------------VVQAF-------AKIVTEVDAK------------- 243
Query: 311 QYLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAF---RTMWLSAEDYPLLLGSADLGV 366
++ G GP+ + + ++ L + RV F + ++ LL +D +
Sbjct: 244 --------LLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ------DNVAELLAMSD--L 287
Query: 367 CLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLL 423
L S + +++ CG+P I E+++ G L ++ +ADQ +
Sbjct: 288 MLLLSEKES--FGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAI 345
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-07
Identities = 13/114 (11%), Positives = 44/114 (38%), Gaps = 12/114 (10%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS 372
++ ++ GKGPD++ + ++L + F +++ + +L + + +H ++
Sbjct: 30 KQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFGF----VNSNELLEILKTCT--LYVHAAN 83
Query: 373 S-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLL 423
+ ++ G+ + LF ++ +L+ ++
Sbjct: 84 VES--EAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKID 135
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL-HTSS 372
P +I G G + + + + V F L +D L +AD+ T
Sbjct: 227 RPDAQLLIVGSGRYESTLRRLATDVS-QNVKF-LGRLEYQDMINTLAAADIFAMPARTRG 284
Query: 373 SGLD---LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLL 423
GLD L + ++ CG+PV A + E V GL+ S +L++ L+
Sbjct: 285 GGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETV-TPATGLVVEGSDVDKLSELLI 339
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 22/112 (19%), Positives = 35/112 (31%), Gaps = 13/112 (11%)
Query: 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS 373
I G+ L L+ EDY LL + +G+ L S
Sbjct: 274 SNEWKIISVGEKHKDI-------ALGKGIHLNSLGKLTLEDYADLLKRSSIGISL-MISP 325
Query: 374 GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS--ELADQLL 423
P ++M GL V Y +L N + + +A+ L+
Sbjct: 326 HPSYP--PLEMAHFGLRVITNKYENK-DLSNWHSNIVSLEQLNPENIAETLV 374
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 55/356 (15%), Positives = 100/356 (28%), Gaps = 90/356 (25%)
Query: 101 SPDVFLVQNPPSVPTLVAVK-WASSLRRSAFIVDWHN---FGYTLLSLSLGRRSHFVS-- 154
VF N + + ++ LR + ++ G T ++L +
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-IDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 155 ---IYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHEL 211
I+ W+ L + Q + +++ NW T D H +
Sbjct: 181 DFKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNW----TSRSDHSSNIKLRI-----HSI 230
Query: 212 FCRLNKILHQP-----LGVQDCVSNGMEGQKAD---ETIFT----SLAGIDVFLKPNRPA 259
L ++L L V V N + + + T + +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNE---EVFLKEISDG------- 309
L S + TPDE +LL+ R + E +TN + + I DG
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDC---RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 310 KQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369
K +L II + S L+ +R M+ L V
Sbjct: 348 KHVNCDKLTTII------ESSLNV------LEPAEYRKMFD------------RLSVF-- 381
Query: 370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVN 425
+P ++ + + S + +V +L LV
Sbjct: 382 --PPSAHIPTILLSLIWFDVI-----KSDVMVVVN------------KLHKYSLVE 418
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 51/334 (15%), Positives = 91/334 (27%), Gaps = 106/334 (31%)
Query: 46 PHAAILEHP----------SIHIHTMTQWPTIPR-GLPKVLKPVLLLLKPLIQ---FFML 91
P + +P + T W + L +++ L +L+P F L
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 92 LWFLC-VKIASPDVFLV---QNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG 147
F I + + S +V K + S ++ S+ L
Sbjct: 379 SVFPPSAHI-PTILLSLIWFDVIKSDVMVVVNK---LHKYSLVEKQPKESTISIPSIYLE 434
Query: 148 RRSHFVSIY----RWIEKYYGKMANGCLCVTQAMQHELAQNWGIKATVL--YDQPPEFF- 200
+ + Y ++ Y + + L Y F+
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPK---TFD-----------SDDLIPPYLDQY-----FYS 475
Query: 201 ----HPTSLE--EKHELFCRL--------NKILHQPLGVQDCVSNGMEGQKADETIFTSL 246
H ++E E+ LF + KI H D + G + L
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH------DSTAWNASGSILN--TLQQL 527
Query: 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEI 306
++ N P Y+R V AIL+ FL +I
Sbjct: 528 KFYKPYICDNDPK-----------------------YERLVNAILD---------FLPKI 555
Query: 307 SDGKQYLYP--RLLFIITGKGPDKESYEEKIRRL 338
+ LL I D+ +EE +++
Sbjct: 556 EE-NLICSKYTDLLRIAL-MAEDEAIFEEAHKQV 587
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 4e-05
Identities = 24/118 (20%), Positives = 37/118 (31%), Gaps = 24/118 (20%)
Query: 315 PRLLFIITGKGPDKESYEEKIRRLR---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 371
I G + E R++ V F +S E+ L L T+
Sbjct: 49 QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLG-SVSEEELIDLYSRCK--GLLCTA 105
Query: 372 SSGLDLPMKVVDMFG--------CGLPVCAVSYSCIEELVKVDKNGLLFSSSSE-LAD 420
+ FG G PV AV+ +E V +K G L ++ + D
Sbjct: 106 KD---------EDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVNEIID 154
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 9/109 (8%)
Query: 319 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLP 378
++ G + E ++E RR V + E LL SA + + + +G
Sbjct: 191 LVLAGPAWEPEYFDEITRRYG-STVEPIGE-VGGERRLDLLASAHAVLAMSQAVTGPWGG 248
Query: 379 -------MKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELAD 420
V + G PV C+ E+V + + + +
Sbjct: 249 IWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDE 297
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 21/121 (17%), Positives = 44/121 (36%), Gaps = 17/121 (14%)
Query: 314 YPRLLFIITGKGPD-----KESYEEKIRRLRLKR-VAFRTMWL--SAEDYPLLLGSADLG 365
P + ++ G +E+ +R++ V T + A + ++D
Sbjct: 260 IPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASD-- 317
Query: 366 VCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLFSSSSELADQL 422
V L S G + V + G PV + + I+ + + G L ++E + +
Sbjct: 318 VILQMSIREGF--GLTVTEAMWKGKPV--IGRAVGGIKFQIVDGETGFLVRDANEAVEVV 373
Query: 423 L 423
L
Sbjct: 374 L 374
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 427 | |||
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.97 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.97 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.96 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.96 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.94 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.91 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.9 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.9 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.9 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.89 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.89 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.89 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.88 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.87 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.79 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.77 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.76 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.76 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.7 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.65 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.64 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.61 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.57 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.56 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.48 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.44 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.28 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.21 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.11 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.03 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.99 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 98.89 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.85 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 98.79 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.58 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 98.12 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 98.06 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 98.01 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.79 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.73 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.68 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.52 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.49 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.38 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.3 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.08 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 96.82 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 95.75 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 94.15 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 92.43 | |
| 2k6g_A | 109 | Replication factor C subunit 1; protein, BRCT, DNA | 80.52 |
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=307.81 Aligned_cols=326 Identities=14% Similarity=0.116 Sum_probs=246.3
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCc-ccccCCCceEEEEeecCCCCCCCCcchhhHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~ 78 (427)
|++|++++++........+|....+..|++. .||+|+|++....... .......++++++++ ... ........
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~ 75 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWP--RSV---MLPTPTTA 75 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEES--SSS---CCSCHHHH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEcc--ccc---cccchhhH
Confidence 7788888887765444456777777777776 6999999998765321 333346689999998 321 11233334
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCc-EEEEecccchhhhhhhcCCCchHHHHHH
Q 014316 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p-~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
..+.+.+.+ .+||+||+|++.... +++.+ ++..++| +|+++|+..... .. ....+
T Consensus 76 ~~l~~~~~~------------~~~Dvv~~~~~~~~~--~~~~~-~~~~~~~~~i~~~h~~~~~~------~~---~~~~~ 131 (394)
T 3okp_A 76 HAMAEIIRE------------REIDNVWFGAAAPLA--LMAGT-AKQAGASKVIASTHGHEVGW------SM---LPGSR 131 (394)
T ss_dssp HHHHHHHHH------------TTCSEEEESSCTTGG--GGHHH-HHHTTCSEEEEECCSTHHHH------TT---SHHHH
T ss_pred HHHHHHHHh------------cCCCEEEECCcchHH--HHHHH-HHhcCCCcEEEEeccchhhh------hh---cchhh
Confidence 444444443 799999999844332 22333 4455776 888999873310 11 12345
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (427)
++++.+.+.+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.....+.++..++
T Consensus 132 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~------------------- 192 (394)
T 3okp_A 132 QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKL------------------- 192 (394)
T ss_dssp HHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhc-------------------
Confidence 666777899999999999999999988765 48999999 87788775544444433332
Q ss_pred CCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC
Q 014316 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (427)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
+++.+. ..|+|+|++.+.||++.+++|++.+.+. .
T Consensus 193 -----------------~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~ 227 (394)
T 3okp_A 193 -----------------GFTDTT-PVIACNSRLVPRKGQDSLIKAMPQVIAA---------------------------R 227 (394)
T ss_dssp -----------------TCCTTC-CEEEEESCSCGGGCHHHHHHHHHHHHHH---------------------------S
T ss_pred -----------------CCCcCc-eEEEEEeccccccCHHHHHHHHHHHHhh---------------------------C
Confidence 333333 4899999999999999999999999887 7
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-------CCCchHHHHHHc
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-------LDLPMKVVDMFG 386 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-------e~~p~~~lEama 386 (427)
|+++|+|+|+|++.+.+++++ .++ ++|.|+|. ++.+++.++|+.||++|+| |.. |++|++++||||
T Consensus 228 ~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~p---s~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 228 PDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGR-LEYQDMINTLAAADIFAMP---ARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp TTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEES-CCHHHHHHHHHHCSEEEEC---CCCBGGGTBCCSSCHHHHHHHH
T ss_pred CCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCC-CCHHHHHHHHHhCCEEEec---CccccccccccccCcHHHHHHH
Confidence 899999999999999998888 455 58999998 9999999999999999998 665 999999999999
Q ss_pred CCCcEEEeccCccccceecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 387 CGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 387 ~G~PVIas~~~g~~e~v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
+|+|||+|+.|+..|++.++ +|++++ |+++++++|.++.
T Consensus 302 ~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~ 342 (394)
T 3okp_A 302 CGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL 342 (394)
T ss_dssp TTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHH
Confidence 99999999999999999999 999994 8999999998764
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=309.61 Aligned_cols=342 Identities=16% Similarity=0.159 Sum_probs=238.8
Q ss_pred CcceEEEEEeC----------CCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCceEEEEeecCCCCCCC
Q 014316 3 RRGRACVVVLG----------DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRG 70 (427)
Q Consensus 3 ~~~~~~v~~~~----------~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~-~~~~~~i~v~~~~~~~~~~~~ 70 (427)
+|++|+++... ..|+.++ +...+..|+++ ||+|+|+|......... ....+++++++++. .+...
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~--~~~~~ 95 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAA--GPYEG 95 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECC--SCSSS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecC--CCccc
Confidence 46677776642 2344333 35566777775 99999999765421111 11235899999983 21111
Q ss_pred Cc--chhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCC
Q 014316 71 LP--KVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR 148 (427)
Q Consensus 71 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~ 148 (427)
+. .....+..+.+.+.+ ..+.+..+||+||+|. .....++.++++..++|+|+++|+... ........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Div~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~-~~~~~~~~ 165 (438)
T 3c48_A 96 LSKEELPTQLAAFTGGMLS------FTRREKVTYDLIHSHY---WLSGQVGWLLRDLWRIPLIHTAHTLAA-VKNSYRDD 165 (438)
T ss_dssp CCGGGGGGGHHHHHHHHHH------HHHHHTCCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSSCHH-HHSCC---
T ss_pred cchhHHHHHHHHHHHHHHH------HHHhccCCCCEEEeCC---ccHHHHHHHHHHHcCCCEEEEecCCcc-cccccccc
Confidence 11 111111111111111 1122223599999997 444444666777789999999999832 21111111
Q ss_pred -CchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCC
Q 014316 149 -RSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPL 223 (427)
Q Consensus 149 -~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 223 (427)
.........++++.+.+.+|.++++|+.+++.+.+.++.+ +.+|+|+ +.+.|.+.....+.++..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~--------- 236 (438)
T 3c48_A 166 SDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRE--------- 236 (438)
T ss_dssp -CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHH---------
T ss_pred cCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHh---------
Confidence 1111234456788888999999999999999998877754 8999999 7777765432221112111
Q ss_pred CccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhh
Q 014316 224 GVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFL 303 (427)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~ 303 (427)
++++.+ ..+|+|+|++.+.||++.+++|++.+.++
T Consensus 237 ---------------------------~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~~----------------- 271 (438)
T 3c48_A 237 ---------------------------LGIPLH-TKVVAFVGRLQPFKGPQVLIKAVAALFDR----------------- 271 (438)
T ss_dssp ---------------------------TTCCSS-SEEEEEESCBSGGGCHHHHHHHHHHHHHH-----------------
T ss_pred ---------------------------cCCCCC-CcEEEEEeeecccCCHHHHHHHHHHHHhh-----------------
Confidence 233333 35899999999999999999999999876
Q ss_pred hhhcCCcccCCC--CEEEEEEeC----CCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC
Q 014316 304 KEISDGKQYLYP--RLLFIITGK----GPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD 376 (427)
Q Consensus 304 ~~~~~~~~~~~~--~~~l~i~G~----G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~ 376 (427)
.| +++|+|+|+ |+..+.+++++++++++ +|.|+|. ++.+++.++|+.||++|+| |..|+
T Consensus 272 ----------~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~ 337 (438)
T 3c48_A 272 ----------DPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDP-RPPSELVAVYRAADIVAVP---SFNES 337 (438)
T ss_dssp ----------CTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECC-CCHHHHHHHHHHCSEEEEC---CSCCS
T ss_pred ----------CCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCC-CChHHHHHHHHhCCEEEEC---ccccC
Confidence 66 799999999 88889999999999985 8999997 9999999999999999997 77799
Q ss_pred CchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 377 LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 377 ~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
+|++++||||||+|||+|+.|+..|++.++.+|++++ |+++++++|.++
T Consensus 338 ~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l 388 (438)
T 3c48_A 338 FGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL 388 (438)
T ss_dssp SCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHH
T ss_pred CchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999994 789999999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-36 Score=306.11 Aligned_cols=348 Identities=16% Similarity=0.100 Sum_probs=241.6
Q ss_pred cceEEEEEeC----CCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccc-----------------cCCCceEEEEe
Q 014316 4 RGRACVVVLG----DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTM 61 (427)
Q Consensus 4 ~~~~~v~~~~----~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~-----------------~~~~~i~v~~~ 61 (427)
+++++++... ..||.++ +...+..|+++ ||+|+|+|+......... ...+|++++++
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 3455555533 3444444 45567788886 999999997654422110 04469999999
Q ss_pred ecCCCCCCCCcc-hhhH-HHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccch
Q 014316 62 TQWPTIPRGLPK-VLKP-VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY 139 (427)
Q Consensus 62 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~ 139 (427)
+........+.. .... ...+..+......++..++.+..+||+||+|+ ....+++.++++..++|+|+++|+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~---~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHD---WHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEES---GGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecc---hhhhhhHHHHhhccCCCEEEEeccccc
Confidence 831000001111 1111 22222233333333333333357999999998 444555667778889999999999843
Q ss_pred hhhhh---hcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhh---CCeEEEecCC-CCCCcCCCC-----hH
Q 014316 140 TLLSL---SLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPTS-----LE 206 (427)
Q Consensus 140 ~~~~~---~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~-~~~~f~~~~-----~~ 206 (427)
..... ........ .....++++.+.+.||.++++|+.+++.....+ ..++.+|||| +.+.|.+.. .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~ 237 (439)
T 3fro_A 158 SKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDE 237 (439)
T ss_dssp CCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHH
T ss_pred ccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhh
Confidence 11000 00000000 000115677888899999999999998855533 3459999999 777776541 12
Q ss_pred HHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHH
Q 014316 207 EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDR 285 (427)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~ 285 (427)
.+.++..+ ++++++ ..|+|+|++. +.||++.+++|++.+.+
T Consensus 238 ~~~~~~~~------------------------------------~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~ 279 (439)
T 3fro_A 238 RKKSLLSK------------------------------------FGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSS 279 (439)
T ss_dssp HHHHHHHH------------------------------------HTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHT
T ss_pred hHHHHHHH------------------------------------cCCCCC--cEEEEEcccccccccHHHHHHHHHHHHh
Confidence 23333222 233333 6999999999 99999999999999876
Q ss_pred HHhhhhccCCCchhhhhhhhhcCCcccCC--CCEEEEEEeCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc
Q 014316 286 RVAAILNEDDSTNEEVFLKEISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361 (427)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~G~G~~~--~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~ 361 (427)
+ . ++++|+|+|+|+.. +.+++++++++ +.+.|.|. ++.+++.++|++
T Consensus 280 ~---------------------------~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~ 330 (439)
T 3fro_A 280 K---------------------------KEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEM-LSREFVRELYGS 330 (439)
T ss_dssp S---------------------------GGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSC-CCHHHHHHHHTT
T ss_pred c---------------------------ccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCC-CCHHHHHHHHHH
Confidence 3 3 78999999999977 88999999998 67888886 899999999999
Q ss_pred CcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 362 ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 362 adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
||++|+| |..|++|++++||||||+|||+|+.||..|++.++ +|+++ +|+++++++|.++.
T Consensus 331 adv~v~p---s~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll 393 (439)
T 3fro_A 331 VDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL 393 (439)
T ss_dssp CSEEEEC---BSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH
T ss_pred CCEEEeC---CCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH
Confidence 9999997 77799999999999999999999999999999877 99999 48899999998753
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=307.55 Aligned_cols=349 Identities=15% Similarity=0.097 Sum_probs=240.2
Q ss_pred CCCcceEEEEEeCC--------------CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCc-cc----cc---CCCceE
Q 014316 1 MGRRGRACVVVLGD--------------LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPH-AA----IL---EHPSIH 57 (427)
Q Consensus 1 ~~~~~~~~v~~~~~--------------~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~-~~----~~---~~~~i~ 57 (427)
|+++++|+++.... .||.++ +...+..|+++ ||+|+|+|....... .. .. ...|++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~ 82 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM-GVQVDIITRRIKDENWPEFSGEIDYYQETNKVR 82 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT-TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc-CCeEEEEeCCCCcccccchhhhHHhccCCCCeE
Confidence 55556777766531 233333 24456677775 999999997643211 11 11 146999
Q ss_pred EEEeecCCCCCCCCc--chhhHHHHHHHHHHHHHHHHHHHHhhh-CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEe
Q 014316 58 IHTMTQWPTIPRGLP--KVLKPVLLLLKPLIQFFMLLWFLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDW 134 (427)
Q Consensus 58 v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~ 134 (427)
+++++. .+...+. .....+.. .... +..++.+. .+||+||+|+ ....+++.++++..++|+|+++
T Consensus 83 v~~~~~--~~~~~~~~~~~~~~~~~---~~~~----l~~~l~~~~~~~Divh~~~---~~~~~~~~~~~~~~~~p~v~~~ 150 (499)
T 2r60_A 83 IVRIPF--GGDKFLPKEELWPYLHE---YVNK----IINFYREEGKFPQVVTTHY---GDGGLAGVLLKNIKGLPFTFTG 150 (499)
T ss_dssp EEEECC--SCSSCCCGGGCGGGHHH---HHHH----HHHHHHHHTCCCSEEEEEH---HHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEEecC--CCcCCcCHHHHHHHHHH---HHHH----HHHHHHhcCCCCCEEEEcC---CcchHHHHHHHHhcCCcEEEEc
Confidence 999983 2111111 11111111 1111 11112222 4899999998 4444556677777899999999
Q ss_pred cccchhhhhhhcCC---C-chHHH-----HHHHHHHHHhccCCEEEEcCHHHHHHHHHh--hC-C-------eEEEecCC
Q 014316 135 HNFGYTLLSLSLGR---R-SHFVS-----IYRWIEKYYGKMANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQ 195 (427)
Q Consensus 135 h~~~~~~~~~~~~~---~-~~~~~-----~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~--~~-~-------~~~vi~n~ 195 (427)
|+..+... ..... . ..+.+ ...++++.+.+.+|.++++|+.+++.+.+. +| . ++.+||||
T Consensus 151 H~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ng 229 (499)
T 2r60_A 151 HSLGAQKM-EKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPG 229 (499)
T ss_dssp SSCHHHHH-HTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCC
T ss_pred cCcccccc-hhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCC
Confidence 99843211 11110 0 11111 234567888899999999999999998876 66 3 49999999
Q ss_pred -CCCCcCCCCh-HHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCH
Q 014316 196 -PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF 273 (427)
Q Consensus 196 -~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~ 273 (427)
+.+.|.+... +.+.++..+++... ...+.+. .+|+|+||+.+.||+
T Consensus 230 vd~~~~~~~~~~~~~~~~r~~~~~~~-------------------------------~~~~~~~-~~i~~vGrl~~~Kg~ 277 (499)
T 2r60_A 230 VNTRVFDGEYGDKIKAKITKYLERDL-------------------------------GSERMEL-PAIIASSRLDQKKNH 277 (499)
T ss_dssp BCTTTSSSCCCHHHHHHHHHHHHHHS-------------------------------CGGGTTS-CEEEECSCCCGGGCH
T ss_pred cChhhcCccchhhhHHHHHHHhcccc-------------------------------cccCCCC-cEEEEeecCccccCH
Confidence 7777776542 22233332221000 0023333 489999999999999
Q ss_pred HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC-EEEEEEeC--CC------C-------hHHHHHHHHH
Q 014316 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR-LLFIITGK--GP------D-------KESYEEKIRR 337 (427)
Q Consensus 274 ~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~i~G~--G~------~-------~~~~~~~~~~ 337 (427)
+.|++|++.+.++ .++ ++|+|+|+ |+ . .+++++++++
T Consensus 278 ~~li~a~~~l~~~---------------------------~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~ 330 (499)
T 2r60_A 278 YGLVEAYVQNKEL---------------------------QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDN 330 (499)
T ss_dssp HHHHHHHHTCHHH---------------------------HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---------------------------CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHh
Confidence 9999999999765 233 68999998 44 1 6788999999
Q ss_pred cCCC-cEEEecCCCCcccHHHHHhcC----cEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 338 LRLK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 338 l~l~-~V~f~g~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
++++ +|.|+|. ++.+++.++|++| |++|+| |..|+||++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 331 ~~l~~~V~~~G~-v~~~~~~~~~~~a~~~~dv~v~p---S~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~ 406 (499)
T 2r60_A 331 NDCRGKVSMFPL-NSQQELAGCYAYLASKGSVFALT---SFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLV 406 (499)
T ss_dssp TTCBTTEEEEEC-CSHHHHHHHHHHHHHTTCEEEEC---CSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEE
T ss_pred cCCCceEEECCC-CCHHHHHHHHHhcCcCCCEEEEC---cccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEe
Confidence 9995 7999998 9999999999999 999997 77899999999999999999999999999999999999999
Q ss_pred --CChHHHHHHHHHhc
Q 014316 413 --SSSSELADQLLVNA 426 (427)
Q Consensus 413 --~~~~~la~~l~~~~ 426 (427)
+|+++||++|.++.
T Consensus 407 ~~~d~~~la~~i~~ll 422 (499)
T 2r60_A 407 DPEDPEDIARGLLKAF 422 (499)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 58899999998764
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-35 Score=292.80 Aligned_cols=313 Identities=15% Similarity=0.194 Sum_probs=223.6
Q ss_pred CCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhh---HHHHHHHHHHHH
Q 014316 13 GDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLK---PVLLLLKPLIQF 88 (427)
Q Consensus 13 ~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 88 (427)
...||.++. ...+..|+++ ||+|+|+|........ ...+++.++.++... ...+..... ....+.+.+
T Consensus 24 p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~--~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l--- 95 (394)
T 2jjm_A 24 PSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFRLN--KVYPNIYFHEVTVNQ--YSVFQYPPYDLALASKMAEVA--- 95 (394)
T ss_dssp C--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC------CCSCCHHHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCccc--ccCCceEEEeccccc--ccccccccccHHHHHHHHHHH---
Confidence 344544443 4456777775 9999999976432111 234588887776211 111111111 111122222
Q ss_pred HHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhc--CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhcc
Q 014316 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKM 166 (427)
Q Consensus 89 ~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~--~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 166 (427)
+..+||+||+|++. +..+.+.++++.. ++|+|+++|+..+... +... .++.+++.+.+.
T Consensus 96 ---------~~~~~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~----~~~~~~~~~~~~ 156 (394)
T 2jjm_A 96 ---------QRENLDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITVL----GSDP----SLNNLIRFGIEQ 156 (394)
T ss_dssp ---------HHHTCSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHTT----TTCT----TTHHHHHHHHHH
T ss_pred ---------HHcCCCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCccccc----CCCH----HHHHHHHHHHhh
Confidence 23789999999733 3333344444443 5999999998633111 1111 224556777889
Q ss_pred CCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 167 ANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 167 ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.... ++..+
T Consensus 157 ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~---~~~~~----------------------------- 204 (394)
T 2jjm_A 157 SDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMT---QLKKE----------------------------- 204 (394)
T ss_dssp SSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCH---HHHHH-----------------------------
T ss_pred CCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchH---HHHHH-----------------------------
Confidence 999999999999999887765 59999999 77767654311 11111
Q ss_pred hcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
++.+.+ ...|+|+|++.+.||++.+++|++.+.++ ++++|+|+|
T Consensus 205 -------~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~~----------------------------~~~~l~i~G 248 (394)
T 2jjm_A 205 -------YGISES-EKILIHISNFRKVKRVQDVVQAFAKIVTE----------------------------VDAKLLLVG 248 (394)
T ss_dssp -------TTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHS----------------------------SCCEEEEEC
T ss_pred -------cCCCCC-CeEEEEeeccccccCHHHHHHHHHHHHhh----------------------------CCCEEEEEC
Confidence 122233 34899999999999999999999998763 468999999
Q ss_pred CCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 324 KGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 324 ~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
+|+..++++++++++++ ++|.|+|. .+++.++|+.||++|+| |..|++|++++||||||+|||+|+.||..|+
T Consensus 249 ~g~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~p---s~~e~~~~~~~EAma~G~PvI~~~~~~~~e~ 322 (394)
T 2jjm_A 249 DGPEFCTILQLVKNLHIEDRVLFLGK---QDNVAELLAMSDLMLLL---SEKESFGLVLLEAMACGVPCIGTRVGGIPEV 322 (394)
T ss_dssp CCTTHHHHHHHHHTTTCGGGBCCCBS---CSCTHHHHHTCSEEEEC---CSCCSCCHHHHHHHHTTCCEEEECCTTSTTT
T ss_pred CchHHHHHHHHHHHcCCCCeEEEeCc---hhhHHHHHHhCCEEEec---cccCCCchHHHHHHhcCCCEEEecCCChHHH
Confidence 99999999999999998 48999996 79999999999999997 7789999999999999999999999999999
Q ss_pred eecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 403 VKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 403 v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
+.++.+|++++ |+++++++|.++.
T Consensus 323 v~~~~~g~~~~~~d~~~la~~i~~l~ 348 (394)
T 2jjm_A 323 IQHGDTGYLCEVGDTTGVADQAIQLL 348 (394)
T ss_dssp CCBTTTEEEECTTCHHHHHHHHHHHH
T ss_pred hhcCCceEEeCCCCHHHHHHHHHHHH
Confidence 99999999994 8899999998763
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=291.91 Aligned_cols=318 Identities=15% Similarity=0.136 Sum_probs=220.8
Q ss_pred CcceEEEEEeCCC---CCCh-hHHHHHHHHHhhCCCcEEEEecCCCCC-cccccCCCceEEEEeecCCCCCCCCcchhhH
Q 014316 3 RRGRACVVVLGDL---GRSP-RMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77 (427)
Q Consensus 3 ~~~~~~v~~~~~~---~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~-~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 77 (427)
+|++++++..... |+.+ .+...+..|++. ||+|++++...... ........+ ++++++.... ...+......
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 95 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGS-VARLRFGPAT 95 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC-------------CCHHH
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEeccccCC-cccccccHHH
Confidence 4566666653322 2222 244566777775 99999999765432 111111122 4444441100 0000001111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHH
Q 014316 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
...+.+.+ +..+||+||++++..... +.++++..++|+|+++|+... .......+.+
T Consensus 96 ~~~l~~~l------------~~~~~Dii~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~--------~~~~~~~~~~ 152 (406)
T 2gek_A 96 HRKVKKWI------------AEGDFDVLHIHEPNAPSL---SMLALQAAEGPIVATFHTSTT--------KSLTLSVFQG 152 (406)
T ss_dssp HHHHHHHH------------HHHCCSEEEEECCCSSSH---HHHHHHHEESSEEEEECCCCC--------SHHHHHHHHS
T ss_pred HHHHHHHH------------HhcCCCEEEECCccchHH---HHHHHHhcCCCEEEEEcCcch--------hhhhHHHHHH
Confidence 11222222 226899999998654432 445566678999999999732 1112233334
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
+++ .+.+.+|.++++|+..++.+.+.++.+ + +|+|+ +.+.|.+...
T Consensus 153 ~~~-~~~~~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~------------------------------ 200 (406)
T 2gek_A 153 ILR-PYHEKIIGRIAVSDLARRWQMEALGSDAV-EIPNGVDVASFADAPL------------------------------ 200 (406)
T ss_dssp TTH-HHHTTCSEEEESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCC------------------------------
T ss_pred HHH-HHHhhCCEEEECCHHHHHHHHHhcCCCcE-EecCCCChhhcCCCch------------------------------
Confidence 444 667899999999999999998877765 7 99998 5444432210
Q ss_pred CCccchhhhcccccccccCCCCCeEEEEEeec-CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC
Q 014316 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~-~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
....+.++ ..|+|+|++ .+.||++.+++|++.+.++ .
T Consensus 201 --------------~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~---------------------------~ 238 (406)
T 2gek_A 201 --------------LDGYPREG-RTVLFLGRYDEPRKGMAVLLAALPKLVAR---------------------------F 238 (406)
T ss_dssp --------------CTTCSCSS-CEEEEESCTTSGGGCHHHHHHHHHHHHTT---------------------------S
T ss_pred --------------hhhccCCC-eEEEEEeeeCccccCHHHHHHHHHHHHHH---------------------------C
Confidence 00122233 489999999 9999999999999998765 6
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEE
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIa 393 (427)
|+++|+|+|+|+. +.++++++++ -++|.|+|. ++.+++.++|+.||++|+| |. .|++|++++|||+||+|||+
T Consensus 239 ~~~~l~i~G~~~~-~~l~~~~~~~-~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~~e~~~~~~~Ea~a~G~PvI~ 312 (406)
T 2gek_A 239 PDVEILIVGRGDE-DELREQAGDL-AGHLRFLGQ-VDDATKASAMRSADVYCAP---HLGGESFGIVLVEAMAAGTAVVA 312 (406)
T ss_dssp TTCEEEEESCSCH-HHHHHHTGGG-GGGEEECCS-CCHHHHHHHHHHSSEEEEC---CCSCCSSCHHHHHHHHHTCEEEE
T ss_pred CCeEEEEEcCCcH-HHHHHHHHhc-cCcEEEEec-CCHHHHHHHHHHCCEEEec---CCCCCCCchHHHHHHHcCCCEEE
Confidence 8999999999988 8888888877 458999997 9999999999999999997 65 79999999999999999999
Q ss_pred eccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 394 VSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 394 s~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|+.||..|++.++.+|+++ +|+++++++|.++.
T Consensus 313 ~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~ 347 (406)
T 2gek_A 313 SDLDAFRRVLADGDAGRLVPVDDADGMAAALIGIL 347 (406)
T ss_dssp CCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH
T ss_pred ecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999999 68899999998763
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=287.67 Aligned_cols=311 Identities=14% Similarity=0.105 Sum_probs=216.8
Q ss_pred CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 15 LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 15 ~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
.|+.++ +...+..|+++ ||+|+|+|....... ..++++++++ .. ......+ ..+.... +.
T Consensus 13 ~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~-----~~~~~v~~~~--~~---~~~~~~~----~~~~~~~----l~ 73 (374)
T 2iw1_A 13 FGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGDC-----PKAFELIQVP--VK---SHTNHGR----NAEYYAW----VQ 73 (374)
T ss_dssp TCHHHHHHHHHHHHHHHT-TCCEEEEESEECSCC-----CTTCEEEECC--CC---CSSHHHH----HHHHHHH----HH
T ss_pred CcchhhHHHHHHHHHHhC-CCeEEEEecCCCCCC-----CCCcEEEEEc--cC---cccchhh----HHHHHHH----HH
Confidence 444443 45566778886 999999997632211 2388999888 22 1111111 1111111 11
Q ss_pred HHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc--cCCEEE
Q 014316 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK--MANGCL 171 (427)
Q Consensus 94 ~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~ad~vi 171 (427)
.+ .+..+||+||+|++.... . +.+.+...+++.+.+.|++.. ......+.+.++++...+ .+|.++
T Consensus 74 ~~-i~~~~~Dvv~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~ii 141 (374)
T 2iw1_A 74 NH-LKEHPADRVVGFNKMPGL--D-VYFAADVCYAEKVAQEKGFLY--------RLTSRYRHYAAFERATFEQGKSTKLM 141 (374)
T ss_dssp HH-HHHSCCSEEEESSCCTTC--S-EEECCSCCHHHHHHHHCCHHH--------HTSHHHHHHHHHHHHHHSTTCCCEEE
T ss_pred HH-HhccCCCEEEEecCCCCc--e-eeeccccccceeeeecccchh--------hhcHHHHHHHHHHHHHhhccCCcEEE
Confidence 11 133799999999732211 0 111112222333333444311 111223445667776665 699999
Q ss_pred EcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCCh-HHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 172 CVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
++|+.+++.+.+.++.+ +.++||+ +.+.|.+... ..+.++..+
T Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~-------------------------------- 189 (374)
T 2iw1_A 142 MLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQK-------------------------------- 189 (374)
T ss_dssp ESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHH--------------------------------
T ss_pred EcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHH--------------------------------
Confidence 99999999998877753 8999999 7666654331 122222222
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
++.+.+ ..+++|+|++.+.||++.+++|++.+.+. ..++++|+|+|+|+
T Consensus 190 ----~~~~~~-~~~i~~~G~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~g~ 238 (374)
T 2iw1_A 190 ----NGIKEQ-QNLLLQVGSDFGRKGVDRSIEALASLPES--------------------------LRHNTLLFVVGQDK 238 (374)
T ss_dssp ----TTCCTT-CEEEEEECSCTTTTTHHHHHHHHHTSCHH--------------------------HHHTEEEEEESSSC
T ss_pred ----hCCCCC-CeEEEEeccchhhcCHHHHHHHHHHhHhc--------------------------cCCceEEEEEcCCC
Confidence 233333 45899999999999999999999998653 12579999999998
Q ss_pred ChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec
Q 014316 327 DKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 405 (427)
Q Consensus 327 ~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~ 405 (427)
.++++++++++++ ++|.|+|. .+++.++|+.||++|+| |..|++|++++||||||+|||+|+.||..|++.+
T Consensus 239 -~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~p---s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~ 311 (374)
T 2iw1_A 239 -PRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLHP---AYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD 311 (374)
T ss_dssp -CHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH
T ss_pred -HHHHHHHHHHcCCCCcEEECCC---cccHHHHHHhcCEEEec---cccCCcccHHHHHHHCCCCEEEecCCCchhhhcc
Confidence 4788999999998 48999997 78999999999999997 7789999999999999999999999999999999
Q ss_pred CCcEEEeC---ChHHHHHHHHHhc
Q 014316 406 DKNGLLFS---SSSELADQLLVNA 426 (427)
Q Consensus 406 ~~~G~l~~---~~~~la~~l~~~~ 426 (427)
+.+|++++ |+++++++|.++.
T Consensus 312 ~~~g~~~~~~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 312 ANCGTVIAEPFSQEQLNEVLRKAL 335 (374)
T ss_dssp HTCEEEECSSCCHHHHHHHHHHHH
T ss_pred CCceEEeCCCCCHHHHHHHHHHHH
Confidence 99999995 7899999998763
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=294.09 Aligned_cols=254 Identities=12% Similarity=0.073 Sum_probs=189.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhh-h---h-hcCCC-chH----HHH--HHHHHHHHh
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLL-S---L-SLGRR-SHF----VSI--YRWIEKYYG 164 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~-~---~-~~~~~-~~~----~~~--~~~~e~~~~ 164 (427)
..+||+||+|+ ....+++.++++. .++|+|+++|+..+... . . ..+.. ..+ ... ..++++.+.
T Consensus 128 ~~~~DiIh~~~---~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 128 GWRPDMVHAHD---WQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SCCCSEEEEEH---HHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCCEEEecc---cchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 46899999998 3333335555654 79999999999743110 0 0 00000 000 000 124567778
Q ss_pred ccCCEEEEcCHHHHHHHHHh-hC-----------CeEEEecCC-CCCCcCCCChH----------------HHHHHHhhh
Q 014316 165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~-~~-----------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 215 (427)
+.+|.++++|+.+++.+.+. +| .++.+|||| |.+.|.+.... .+.++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 280 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAV---- 280 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHH----
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHH----
Confidence 89999999999999988664 33 349999999 77777654311 11222
Q ss_pred hhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCC
Q 014316 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295 (427)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~ 295 (427)
+++++++.+...+|+|+||+.+.||++.|++|++.+.+
T Consensus 281 --------------------------------r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------- 318 (485)
T 1rzu_A 281 --------------------------------AEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS---------- 318 (485)
T ss_dssp --------------------------------HHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH----------
T ss_pred --------------------------------HHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh----------
Confidence 22234444323489999999999999999999999864
Q ss_pred CchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcCcEEEeeccCC
Q 014316 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHTSS 372 (427)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~-f~g~~~~~~~~~~~l~~adi~v~p~~~s 372 (427)
++++|+|+|+|+ ..+.+++++++++ ++|. |.|. +.+++.++|++||++|+| |
T Consensus 319 -------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p---S 373 (485)
T 1rzu_A 319 -------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIGY--NEPLSHLMQAGCDAIIIP---S 373 (485)
T ss_dssp -------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEESC--CHHHHHHHHHHCSEEEEC---C
T ss_pred -------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecCC--CHHHHHHHHhcCCEEEEC---c
Confidence 379999999997 3678888888886 6887 6775 677779999999999997 7
Q ss_pred CCCCCchHHHHHHcCCCcEEEeccCccccceecC---------CcEEEe--CChHHHHHHHHHhc
Q 014316 373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 373 ~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~---------~~G~l~--~~~~~la~~l~~~~ 426 (427)
..|+||++++||||||+|||+|+.||++|++.++ .+|+++ +|+++||++|.++.
T Consensus 374 ~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 374 RFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV 438 (485)
T ss_dssp SCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHH
Confidence 7899999999999999999999999999999998 899999 47899999998763
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=291.67 Aligned_cols=253 Identities=15% Similarity=0.109 Sum_probs=189.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhh-h---h-hcCCC-chH------HHHHHHHHHHHhcc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLL-S---L-SLGRR-SHF------VSIYRWIEKYYGKM 166 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~-~---~-~~~~~-~~~------~~~~~~~e~~~~~~ 166 (427)
.+||+||+|++ ...+++.+++ +..++|+|+++|+..+... . . ..+.. ..+ .....++++.+.+.
T Consensus 128 ~~~Divh~~~~---~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 128 WRPDVVHAHDW---HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCCSEEEEETG---GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCCEEEeecc---chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 68999999983 2233344555 6779999999999743110 0 0 00000 000 00012456777789
Q ss_pred CCEEEEcCHHHHHHHHHh-hC-------------CeEEEecCC-CCCCcCCCChH----------------HHHHHHhhh
Q 014316 167 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (427)
Q Consensus 167 ad~vi~vS~~~~~~l~~~-~~-------------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 215 (427)
+|.++++|+.+++.+.+. ++ .++.+|||| |.+.|.+.... .+.++.
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--- 281 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQ--- 281 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHH---
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHH---
Confidence 999999999999988654 44 569999999 77777654210 112222
Q ss_pred hhcccCCCCccccccCCCCCCCccchhhhcccccccccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccC
Q 014316 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (427)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~ 294 (427)
++++++. .+..+|+|+||+.+.||++.|++|++.+.+
T Consensus 282 ---------------------------------~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--------- 319 (485)
T 2qzs_A 282 ---------------------------------IAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--------- 319 (485)
T ss_dssp ---------------------------------HHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH---------
T ss_pred ---------------------------------HHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh---------
Confidence 2223333 133589999999999999999999999864
Q ss_pred CCchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcCcEEEeeccC
Q 014316 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHTS 371 (427)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~-f~g~~~~~~~~~~~l~~adi~v~p~~~ 371 (427)
++++|+|+|+|+ ..+.+++++++++ ++|. |.|. +.+++.++|++||++|+|
T Consensus 320 --------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p--- 373 (485)
T 2qzs_A 320 --------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIGY--HEAFSHRIMGGADVILVP--- 373 (485)
T ss_dssp --------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEESC--CHHHHHHHHHHCSEEEEC---
T ss_pred --------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCCC--CHHHHHHHHHhCCEEEEC---
Confidence 279999999997 4678888888886 6886 7775 677779999999999997
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccCccccceecC---------CcEEEe--CChHHHHHHHHHhc
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~---------~~G~l~--~~~~~la~~l~~~~ 426 (427)
|..|+||++++||||||+|||+|++||.+|++.++ .+|+++ +|+++||++|.++.
T Consensus 374 S~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 374 SRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAF 439 (485)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHH
T ss_pred CccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHH
Confidence 77899999999999999999999999999999998 899999 48899999998763
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-33 Score=303.24 Aligned_cols=270 Identities=11% Similarity=0.076 Sum_probs=196.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHH---H--HHHHHHHhccCCEEEEcC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSI---Y--RWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~---~--~~~e~~~~~~ad~vi~vS 174 (427)
.+||+||+|. ..+.+++.++++..|+|+|+|.|+.+.............+... . ...|+.+++.||.|||+|
T Consensus 406 ~~PDVIHsH~---~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S 482 (816)
T 3s28_A 406 GKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITST 482 (816)
T ss_dssp SCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESC
T ss_pred CCCeEEEeCC---chHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECC
Confidence 4799999997 5666668888888999999999998432111100011111111 1 124777899999999999
Q ss_pred HHHHHHHHH---hhCC---------------------eEEEecCC-CCCCcCCCChHHH--HHHHhhhhhcccCCCCccc
Q 014316 175 QAMQHELAQ---NWGI---------------------KATVLYDQ-PPEFFHPTSLEEK--HELFCRLNKILHQPLGVQD 227 (427)
Q Consensus 175 ~~~~~~l~~---~~~~---------------------~~~vi~n~-~~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 227 (427)
+..++.+.+ .|+. ++.+|||| |.+.|.|...... ..+...+..
T Consensus 483 ~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~---------- 552 (816)
T 3s28_A 483 FQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEE---------- 552 (816)
T ss_dssp HHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHH----------
T ss_pred HHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccc----------
Confidence 999875221 1211 68999999 8888877542111 000000000
Q ss_pred cccCCCCCCCccchhh-hccccccccc-CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhh
Q 014316 228 CVSNGMEGQKADETIF-TSLAGIDVFL-KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 305 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (427)
..| +...++.++. ...+..+|+|+||+.+.||++.|++|++.+.+.
T Consensus 553 -------------~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~------------------- 600 (816)
T 3s28_A 553 -------------LLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRL------------------- 600 (816)
T ss_dssp -------------HHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH-------------------
T ss_pred -------------cccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhh-------------------
Confidence 000 0001122222 122334999999999999999999999999875
Q ss_pred hcCCcccCCCCEEEEEEeCCC-----------ChHHHHHHHHHcCC-CcEEEecC---CCCcccHHHHHh-cCcEEEeec
Q 014316 306 ISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRL-KRVAFRTM---WLSAEDYPLLLG-SADLGVCLH 369 (427)
Q Consensus 306 ~~~~~~~~~~~~~l~i~G~G~-----------~~~~~~~~~~~l~l-~~V~f~g~---~~~~~~~~~~l~-~adi~v~p~ 369 (427)
.++++|+|+|+|+ ..+.++++++++++ ++|.|+|. +++.+++..+|. ++|++|+|
T Consensus 601 --------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~P- 671 (816)
T 3s28_A 601 --------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQP- 671 (816)
T ss_dssp --------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-
T ss_pred --------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEEC-
Confidence 5689999999998 45778899999999 48999995 133578999888 68999997
Q ss_pred cCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 370 ~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|..|+||++++||||||+|||+|++||..|++.++.+|+++ +|++++|++|.++
T Consensus 672 --S~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~l 727 (816)
T 3s28_A 672 --ALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADF 727 (816)
T ss_dssp --CSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHH
T ss_pred --CCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999 4789999998654
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=286.21 Aligned_cols=240 Identities=15% Similarity=0.209 Sum_probs=180.5
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEE-EcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL-CVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi-~vS~~~ 177 (427)
..+||+||+|++.... + +.+++ .++|+|+++|+... ... ....+++++.+ +.+|.++ ++|+..
T Consensus 124 ~~~~Dvv~~~~~~~~~--~-~~~~~--~~~p~v~~~h~~~~-------~~~---~~~~~~~~~~~-~~~~~~i~~~s~~~ 187 (416)
T 2x6q_A 124 LSSFDYVLVHDPQPAA--L-IEFYE--KKSPWLWRCHIDLS-------SPN---REFWEFLRRFV-EKYDRYIFHLPEYV 187 (416)
T ss_dssp GGGSSEEEEESSTTGG--G-GGGSC--CCSCEEEECCSCCS-------SCC---HHHHHHHHHHH-TTSSEEEESSGGGS
T ss_pred hcCCCEEEEeccchhh--H-HHHHH--hcCCEEEEEccccC-------Ccc---HHHHHHHHHHH-HhCCEEEEechHHH
Confidence 3689999999854322 1 22222 24899999998732 111 12334455555 4566665 666655
Q ss_pred HHHHHHhhC-CeEEEecCC-CCCCcCCC--ChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 178 QHELAQNWG-IKATVLYDQ-PPEFFHPT--SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 178 ~~~l~~~~~-~~~~vi~n~-~~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
++. +. .++.+|||| |...|.+. +.+.+.++..+ ++.
T Consensus 188 ~~~----~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~------------------------------------~~~ 227 (416)
T 2x6q_A 188 QPE----LDRNKAVIMPPSIDPLSEKNVELKQTEILRILER------------------------------------FDV 227 (416)
T ss_dssp CTT----SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHH------------------------------------TTC
T ss_pred Hhh----CCccceEEeCCCCChhhhcccccChhhHHHHHHH------------------------------------hCC
Confidence 542 23 458899999 76555432 22333333222 233
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-----h
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-----K 328 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~-----~ 328 (427)
++++ .+|+|+||+.+.||++.|++|++.+.++ .|+++|+|+|+|+. .
T Consensus 228 ~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~ 279 (416)
T 2x6q_A 228 DPEK-PIITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------IPGVQLLLVGVMAHDDPEGW 279 (416)
T ss_dssp CTTS-CEEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------CTTCEEEEEECCCTTCHHHH
T ss_pred CCCC-cEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEecCcccchhHH
Confidence 3444 4899999999999999999999999887 78999999999975 4
Q ss_pred HHHHHHHHHcCC-CcEEEecC--CCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec
Q 014316 329 ESYEEKIRRLRL-KRVAFRTM--WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 405 (427)
Q Consensus 329 ~~~~~~~~~l~l-~~V~f~g~--~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~ 405 (427)
+.++++++++++ ++|.|+|. .++.+++.++|++||++|+| |..|+||++++||||||+|||+|+.||.+|++.+
T Consensus 280 ~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~p---s~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~ 356 (416)
T 2x6q_A 280 IYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQM---SIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD 356 (416)
T ss_dssp HHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEEC---CSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB
T ss_pred HHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEEC---CCcCCCccHHHHHHHcCCCEEEccCCCChhheec
Confidence 567888999998 48999995 13367999999999999997 7789999999999999999999999999999999
Q ss_pred CCcEEEeCChHHHHHHHHHh
Q 014316 406 DKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 406 ~~~G~l~~~~~~la~~l~~~ 425 (427)
+.+|++++|+++++++|.++
T Consensus 357 ~~~g~l~~d~~~la~~i~~l 376 (416)
T 2x6q_A 357 GETGFLVRDANEAVEVVLYL 376 (416)
T ss_dssp TTTEEEESSHHHHHHHHHHH
T ss_pred CCCeEEECCHHHHHHHHHHH
Confidence 99999999999999999875
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=275.42 Aligned_cols=262 Identities=18% Similarity=0.121 Sum_probs=202.9
Q ss_pred CCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 16 ~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (427)
|+.++. ...+..|+++ ||+|++++....... ..++++++.+ .. ..+.+.+.
T Consensus 30 gG~~~~~~~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~~----~~l~~~l~-------- 81 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------EP----EEIERWLR-------- 81 (342)
T ss_dssp CHHHHHHHHHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------SH----HHHHHHHH--------
T ss_pred ChHHHHHHHHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------cH----HHHHHHHH--------
Confidence 444433 4456777775 999999997654321 2355543222 01 12223332
Q ss_pred HHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC
Q 014316 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
..+||+||+|++.... ++++..++| |+++|+... . . ..+|.++++|
T Consensus 82 ----~~~~Dvi~~~~~~~~~------~~~~~~~~p-v~~~h~~~~-~------~----------------~~~d~ii~~S 127 (342)
T 2iuy_A 82 ----TADVDVVHDHSGGVIG------PAGLPPGTA-FISSHHFTT-R------P----------------VNPVGCTYSS 127 (342)
T ss_dssp ----HCCCSEEEECSSSSSC------STTCCTTCE-EEEEECSSS-B------C----------------SCCTTEEESC
T ss_pred ----hcCCCEEEECCchhhH------HHHhhcCCC-EEEecCCCC-C------c----------------ccceEEEEcC
Confidence 2799999999854321 125667999 999999832 1 1 1299999999
Q ss_pred HHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 175 QAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 175 ~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
+.+++.+.+ ..++.+|||+ +.+.|.+.. ..
T Consensus 128 ~~~~~~~~~--~~~~~vi~ngvd~~~~~~~~-----------------------------------------------~~ 158 (342)
T 2iuy_A 128 RAQRAHCGG--GDDAPVIPIPVDPARYRSAA-----------------------------------------------DQ 158 (342)
T ss_dssp HHHHHHTTC--CTTSCBCCCCBCGGGSCCST-----------------------------------------------TC
T ss_pred HHHHHHHhc--CCceEEEcCCCChhhcCccc-----------------------------------------------cc
Confidence 999998866 5568899999 666664432 00
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
.+++ ..|+|+||+.+.||++.+++|++.+ +++|+|+|+|+..+.+++
T Consensus 159 ~~~~-~~i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l~~ 205 (342)
T 2iuy_A 159 VAKE-DFLLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYFDE 205 (342)
T ss_dssp CCCC-SCEEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHHHH
T ss_pred CCCC-CEEEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHHHH
Confidence 1122 3799999999999999999999874 488999999999999999
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC----------CCCCchHHHHHHcCCCcEEEeccCccccce
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS----------GLDLPMKVVDMFGCGLPVCAVSYSCIEELV 403 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~----------~e~~p~~~lEama~G~PVIas~~~g~~e~v 403 (427)
++++++ ++|+|+|. ++.+++.++|++||++|+| |. .|+||++++||||||+|||+|+.||.+|++
T Consensus 206 ~~~~~~-~~v~~~g~-~~~~~l~~~~~~adv~v~p---s~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~ 280 (342)
T 2iuy_A 206 ITRRYG-STVEPIGE-VGGERRLDLLASAHAVLAM---SQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIV 280 (342)
T ss_dssp HHHHHT-TTEEECCC-CCHHHHHHHHHHCSEEEEC---CCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHG
T ss_pred HHHHhC-CCEEEecc-CCHHHHHHHHHhCCEEEEC---CcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHh
Confidence 999988 89999997 9999999999999999998 65 699999999999999999999999999999
Q ss_pred ec--CCcEEEeC-ChHHHHHHHHHhc
Q 014316 404 KV--DKNGLLFS-SSSELADQLLVNA 426 (427)
Q Consensus 404 ~~--~~~G~l~~-~~~~la~~l~~~~ 426 (427)
.+ +.+|++++ |+++++++|.++.
T Consensus 281 ~~~~~~~g~~~~~d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 281 PSVGEVVGYGTDFAPDEARRTLAGLP 306 (342)
T ss_dssp GGGEEECCSSSCCCHHHHHHHHHTSC
T ss_pred cccCCCceEEcCCCHHHHHHHHHHHH
Confidence 99 99999997 8999999998764
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=262.50 Aligned_cols=231 Identities=13% Similarity=0.184 Sum_probs=183.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCC----cEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCC--EEEEc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS----AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GCLCV 173 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~----p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~vi~v 173 (427)
.+||+||+|+ ..... +.+++...++ +++..+|.... ..... .+++.+.+| .++++
T Consensus 80 ~~~Div~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--------~~~~~~~~~~~~ii~~ 140 (413)
T 3oy2_A 80 HKPDIVMIYN---DPIVI-GNYLLAMGKCSHRTKIVLYVDLVSK-------NIREN--------LWWIFSHPKVVGVMAM 140 (413)
T ss_dssp HCCSEEEEEE---CHHHH-HHHHHHGGGCCSCCEEEEEECCCSB-------SCCGG--------GGGGGGCTTEEEEEES
T ss_pred cCCCEEEEcc---hHHHH-HHHHHHhccCCCCCceeeeccccch-------hhHHH--------HHHHHhccCCceEEEc
Confidence 7999999996 33333 4455555554 45556665521 01111 256678888 99999
Q ss_pred CHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 174 TQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 174 S~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
|+.+++.+.+ ++. ++.+|||| +.+.|. ..+.+
T Consensus 141 S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~~----~~~~~---------------------------------------- 175 (413)
T 3oy2_A 141 SKCWISDICN-YGCKVPINIVSHFVDTKTIY----DARKL---------------------------------------- 175 (413)
T ss_dssp STHHHHHHHH-TTCCSCEEECCCCCCCCCCT----THHHH----------------------------------------
T ss_pred CHHHHHHHHH-cCCCCceEEeCCCCCHHHHH----HHHHh----------------------------------------
Confidence 9999999988 554 49999999 766661 11111
Q ss_pred cccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-
Q 014316 251 VFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK- 328 (427)
Q Consensus 251 ~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~- 328 (427)
.+.+. .+...|+|+||+.+.||++.+++|++.+.++ .|+++|+|+|+|+..
T Consensus 176 ~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~ 228 (413)
T 3oy2_A 176 VGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLCNSHHES 228 (413)
T ss_dssp TTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEEECCTTC
T ss_pred cCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEeCCcccc
Confidence 12222 1346899999999999999999999999887 889999999999865
Q ss_pred -----HHHHHHHHHcCCCc--------EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 329 -----ESYEEKIRRLRLKR--------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 329 -----~~~~~~~~~l~l~~--------V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+.++++++++|+++ |.|.|. ++.+++.++|++||++|+| |..|+||++++||||||+|||+|+
T Consensus 229 ~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~-~~~~~~~~~~~~adv~v~p---S~~E~~~~~~lEAma~G~PvI~s~ 304 (413)
T 3oy2_A 229 KFDLHSIALRELVASGVDNVFTHLNKIMINRTV-LTDERVDMMYNACDVIVNC---SSGEGFGLCSAEGAVLGKPLIISA 304 (413)
T ss_dssp SCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSC-CCHHHHHHHHHHCSEEEEC---CSCCSSCHHHHHHHTTTCCEEEEC
T ss_pred hhhHHHHHHHHHHHcCcccccccccceeeccCc-CCHHHHHHHHHhCCEEEeC---CCcCCCCcHHHHHHHcCCCEEEcC
Confidence 88899999999974 777786 9999999999999999997 778999999999999999999999
Q ss_pred cCccccceecCCc---------------EE--Ee--CChHHHHHHHHHhc
Q 014316 396 YSCIEELVKVDKN---------------GL--LF--SSSSELADQLLVNA 426 (427)
Q Consensus 396 ~~g~~e~v~~~~~---------------G~--l~--~~~~~la~~l~~~~ 426 (427)
.||.+|++.++.+ |+ ++ +|+++||++| ++.
T Consensus 305 ~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~ 353 (413)
T 3oy2_A 305 VGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF 353 (413)
T ss_dssp CHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT
T ss_pred CCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHh
Confidence 9999999999887 88 88 6899999999 764
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=267.14 Aligned_cols=256 Identities=16% Similarity=0.063 Sum_probs=179.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh-------hcCCcEEEEecccchhh------hhhhcCCCchHHHH-----------
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS-------LRRSAFIVDWHNFGYTL------LSLSLGRRSHFVSI----------- 155 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~-------~~~~p~i~~~h~~~~~~------~~~~~~~~~~~~~~----------- 155 (427)
..+||+|+|. +.+.++..+++. ..++|+|+|+|+..+.- ..............
T Consensus 152 ~~ddIiH~hD---W~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 152 GEDVVFVCND---WHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp CSCEEEEEES---GGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTC
T ss_pred CCCEEEEECc---chHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhccccccc
Confidence 3578889998 444443434332 24799999999875411 00000000000000
Q ss_pred --HHHHHHHHhccCCEEEEcCHHHHHHHHHhhC-----------CeEEEecCC-CCCCcCCCCh-------------HHH
Q 014316 156 --YRWIEKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQ-PPEFFHPTSL-------------EEK 208 (427)
Q Consensus 156 --~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~-----------~~~~vi~n~-~~~~f~~~~~-------------~~~ 208 (427)
.-.+++.....||.|++||+..++++.+.++ .++.+|+|| |.+.|.|... +.+
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K 308 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAK 308 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHH
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhh
Confidence 0014566667899999999999999876543 138999999 8888876421 011
Q ss_pred HHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc--CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHH
Q 014316 209 HELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286 (427)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~ 286 (427)
..... .+.+..++ .++.| +|+|+||+.++||++.|++|++.+.+.
T Consensus 309 ~~~k~--------------------------------~l~~~~gl~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l~~~ 355 (536)
T 3vue_A 309 ALNKE--------------------------------ALQAEAGLPVDRKIP-LIAFIGRLEEQKGPDVMAAAIPELMQE 355 (536)
T ss_dssp HHHHH--------------------------------HHHHHTTSCCCTTSC-EEEEECCBSGGGCHHHHHHHHHHHTTS
T ss_pred HHHHH--------------------------------HHHHhcCCCCCCCCc-EEEEEeeccccCChHHHHHHHHHhHhh
Confidence 11000 01111222 34445 899999999999999999999998643
Q ss_pred HhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH--HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcE
Q 014316 287 VAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE--SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADL 364 (427)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~--~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi 364 (427)
+.+|+++|.|+... .+++.+..++ .+|.|.+. .+.+++..+|++||+
T Consensus 356 -----------------------------~~~l~l~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aD~ 404 (536)
T 3vue_A 356 -----------------------------DVQIVLLGTGKKKFEKLLKSMEEKYP-GKVRAVVK-FNAPLAHLIMAGADV 404 (536)
T ss_dssp -----------------------------SCEEEEECCBCHHHHHHHHHHHHHST-TTEEEECS-CCHHHHHHHHHHCSE
T ss_pred -----------------------------CCeEEEEeccCchHHHHHHHHHhhcC-CceEEEEe-ccHHHHHHHHHhhhe
Confidence 67888888886433 3344444433 47999997 899999999999999
Q ss_pred EEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe------------CChHHHHHHHHHh
Q 014316 365 GVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF------------SSSSELADQLLVN 425 (427)
Q Consensus 365 ~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~------------~~~~~la~~l~~~ 425 (427)
+|+| |..|+||++++|||+||+|||+|++||++|+|.++.+|+.+ .|+++|+++|.+.
T Consensus 405 ~v~P---S~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 405 LAVP---SRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp EEEC---CSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred eecc---cccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 9998 88899999999999999999999999999999999999954 3468899988653
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-29 Score=245.59 Aligned_cols=301 Identities=17% Similarity=0.138 Sum_probs=198.4
Q ss_pred ceEEEEEeCCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
++++++. ++.|+... +...+..|+++ ||+|+++|..... ........|++++.++... .... .....+..+.+
T Consensus 7 mkIl~~~-~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~~~~--~~~~-~~~~~~~~~~~ 80 (364)
T 1f0k_A 7 KRLMVMA-GGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIRISG--LRGK-GIKALIAAPLR 80 (364)
T ss_dssp CEEEEEC-CSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECCCCC--CTTC-CHHHHHTCHHH
T ss_pred cEEEEEe-CCCccchhHHHHHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEecCCc--cCcC-ccHHHHHHHHH
Confidence 5666664 32332221 23566777775 9999999976532 2233344589998887311 1110 00111101111
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
.+..... +..++ +..+||+||++.+. ... .+.++++..++|+|++.|+. + .. +.++++
T Consensus 81 ~~~~~~~-l~~~l-~~~~pDvv~~~~~~--~~~-~~~~~~~~~~~p~v~~~~~~-~--------~~--------~~~~~~ 138 (364)
T 1f0k_A 81 IFNAWRQ-ARAIM-KAYKPDVVLGMGGY--VSG-PGGLAAWSLGIPVVLHEQNG-I--------AG--------LTNKWL 138 (364)
T ss_dssp HHHHHHH-HHHHH-HHHCCSEEEECSST--THH-HHHHHHHHTTCCEEEEECSS-S--------CC--------HHHHHH
T ss_pred HHHHHHH-HHHHH-HhcCCCEEEEeCCc--Cch-HHHHHHHHcCCCEEEEecCC-C--------Cc--------HHHHHH
Confidence 1111111 11111 33699999999743 222 25566777899999999986 2 10 234567
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchh
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI 242 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (427)
.+.+|.+++.++.. ++ ++.+++|+ +.+.|.+.. .+.+
T Consensus 139 ~~~~d~v~~~~~~~-------~~-~~~~i~n~v~~~~~~~~~--~~~~-------------------------------- 176 (364)
T 1f0k_A 139 AKIATKVMQAFPGA-------FP-NAEVVGNPVRTDVLALPL--PQQR-------------------------------- 176 (364)
T ss_dssp TTTCSEEEESSTTS-------SS-SCEECCCCCCHHHHTSCC--HHHH--------------------------------
T ss_pred HHhCCEEEecChhh-------cC-CceEeCCccchhhcccch--hhhh--------------------------------
Confidence 78899999988754 22 46788998 544443221 1111
Q ss_pred hhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEE
Q 014316 243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FII 321 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i 321 (427)
+...++++.++++.|++.+.|+++.+++|++.+.+ +++ +++
T Consensus 177 --------~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~------------------------------~~~~l~i 218 (364)
T 1f0k_A 177 --------LAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD------------------------------SVTIWHQ 218 (364)
T ss_dssp --------HTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG------------------------------GEEEEEE
T ss_pred --------cccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC------------------------------CcEEEEE
Confidence 12334445466777899999999999999998742 577 577
Q ss_pred EeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc-
Q 014316 322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE- 400 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~- 400 (427)
+|+|+ .++++++++++++++|.|+|. + +++.++|+.||++|+| | + |++++|||+||+|||+++.+|.+
T Consensus 219 ~G~~~-~~~l~~~~~~~~~~~v~~~g~-~--~~~~~~~~~ad~~v~~---s-g---~~~~~EAma~G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 219 SGKGS-QQSVEQAYAEAGQPQHKVTEF-I--DDMAAAYAWADVVVCR---S-G---ALTVSEIAAAGLPALFVPFQHKDR 287 (364)
T ss_dssp CCTTC-HHHHHHHHHHTTCTTSEEESC-C--SCHHHHHHHCSEEEEC---C-C---HHHHHHHHHHTCCEEECCCCCTTC
T ss_pred cCCch-HHHHHHHHhhcCCCceEEecc-h--hhHHHHHHhCCEEEEC---C-c---hHHHHHHHHhCCCEEEeeCCCCch
Confidence 89998 578888999998889999998 4 8999999999999996 4 2 89999999999999999999864
Q ss_pred -------cceecCCcEEEe--CC--hHHHHHHHHHh
Q 014316 401 -------ELVKVDKNGLLF--SS--SSELADQLLVN 425 (427)
Q Consensus 401 -------e~v~~~~~G~l~--~~--~~~la~~l~~~ 425 (427)
++++++ .|+++ +| +++|+++|.++
T Consensus 288 ~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 288 QQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp HHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC
T ss_pred hHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc
Confidence 455444 59999 44 78999998754
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=254.97 Aligned_cols=228 Identities=14% Similarity=0.134 Sum_probs=167.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH----h---hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCC--EE
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS----S---LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GC 170 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~----~---~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~v 170 (427)
.++|+||+++ ..+...+..+. . ..+.|+++.+|++.. .. ..... .+.+++..++.++ .+
T Consensus 131 ~~~Dvv~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~----~~~~~----~~~~~~~~~~~~~~~~v 198 (413)
T 2x0d_A 131 AKHDIFIATA---WWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEP-GF----YQWSS----QYVLAESTYKYRGPQIA 198 (413)
T ss_dssp CTTEEEEECS---HHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGG-GG----SCSSH----HHHHHHHTTSCCSCEEE
T ss_pred CCCCEEEEeh---HHHHHHHHHhhhhhhhhcccccCcEEEEEeechh-hc----CccCh----HHHHHHHHhccCCceEE
Confidence 5799999987 44333232221 1 135688888888732 11 11111 1334556666665 58
Q ss_pred EEcCHHHHHHHHHh-hC-CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 171 LCVTQAMQHELAQN-WG-IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 171 i~vS~~~~~~l~~~-~~-~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
+++|+.+++.+.+. ++ .++.+++|+ +.+.|.+..
T Consensus 199 i~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~------------------------------------------- 235 (413)
T 2x0d_A 199 VFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYIN------------------------------------------- 235 (413)
T ss_dssp EEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTT-------------------------------------------
T ss_pred EEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhcccc-------------------------------------------
Confidence 89999999999865 23 237788887 433332110
Q ss_pred ccccccCCCCCeEEEEEeec-CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC---EEEEEEe
Q 014316 248 GIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---LLFIITG 323 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~-~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~G 323 (427)
....+ ...++++||+ .+.||++.|++|++.+.+. .|+ ++|+++|
T Consensus 236 ----~~~~~-~~~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~~l~ivG 283 (413)
T 2x0d_A 236 ----DKRQK-EKIILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEWKIISVG 283 (413)
T ss_dssp ----SCCCC-CSEEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGCEEEEEE
T ss_pred ----cccCC-CCEEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCceEEEEEc
Confidence 11122 2378889996 6889999999999999876 564 8999999
Q ss_pred CCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 324 KGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 324 ~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
+|+.. .++++ ++|+|+|. ++.+++.++|++||++|+| |..|+||++++||||||+|||++ .+|..|+
T Consensus 284 ~~~~~-------~~l~~~~~v~f~G~-~~~~~l~~~~~~adv~v~p---S~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~ 351 (413)
T 2x0d_A 284 EKHKD-------IALGKGIHLNSLGK-LTLEDYADLLKRSSIGISL---MISPHPSYPPLEMAHFGLRVITN-KYENKDL 351 (413)
T ss_dssp SCCCC-------EEEETTEEEEEEES-CCHHHHHHHHHHCCEEECC---CSSSSCCSHHHHHHHTTCEEEEE-CBTTBCG
T ss_pred CCchh-------hhcCCcCcEEEcCC-CCHHHHHHHHHhCCEEEEe---cCCCCCCcHHHHHHhCCCcEEEe-CCCcchh
Confidence 99764 24566 48999998 9999999999999999997 77899999999999999999995 5667899
Q ss_pred eecCCcEEEe--CChHHHHHHHHHhc
Q 014316 403 VKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 403 v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
+.++.+|+++ +|+++||++|.++.
T Consensus 352 v~~~~~G~lv~~~d~~~la~ai~~ll 377 (413)
T 2x0d_A 352 SNWHSNIVSLEQLNPENIAETLVELC 377 (413)
T ss_dssp GGTBTTEEEESSCSHHHHHHHHHHHH
T ss_pred hhcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999 68899999998763
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=250.13 Aligned_cols=215 Identities=12% Similarity=0.079 Sum_probs=162.1
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHH
Q 014316 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180 (427)
Q Consensus 101 ~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~ 180 (427)
++|+||.++ ..... ...+++..++|+++++|+.... .. .. . ....+++++...+.+|.++++|+.+++.
T Consensus 124 ~~DvIh~~~--~~~~~--~~~~~~~~~~p~v~~~h~~~~~-~~--~~-~---~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 192 (406)
T 2hy7_A 124 ESDVIVFES--GIAVA--FIELAKRVNPAAKLVYRASDGL-ST--IN-V---ASYIEREFDRVAPTLDVIALVSPAMAAE 192 (406)
T ss_dssp HCSEEEEES--SGGGG--GHHHHHHHCTTSEEEEEESSCH-HH--HT-C---CHHHHHHHHHHGGGCSEEEESCGGGGGG
T ss_pred CCCEEEECC--chHHH--HHHHHHHhCCCEEEEEeccchh-hc--cc-c---cHHHHHHHHHHHHhCCEEEEcCHHHHHH
Confidence 699999543 22221 1134455689999999976320 00 01 1 1234667788889999999999999988
Q ss_pred HHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCe
Q 014316 181 LAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (427)
Q Consensus 181 l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (427)
+.+. + ++.+|||| |.+.|.+.. ..+.+...
T Consensus 193 ~~~~-~-~i~vipngvd~~~f~~~~-----------------------------------------------~~~~~~~~ 223 (406)
T 2hy7_A 193 VVSR-D-NVFHVGHGVDHNLDQLGD-----------------------------------------------PSPYAEGI 223 (406)
T ss_dssp CSCS-T-TEEECCCCBCTTHHHHHC-----------------------------------------------SCSCCSSE
T ss_pred HHhc-C-CEEEEcCCcChHhcCccc-----------------------------------------------ccccCCCc
Confidence 7653 4 89999999 655553211 00122225
Q ss_pred EEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcC
Q 014316 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLR 339 (427)
Q Consensus 260 ~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~ 339 (427)
.++|+||+.+.||+ ++.+.+. .|+++|+|+|+|+ +++++
T Consensus 224 ~i~~vGrl~~~Kg~------~~~l~~~---------------------------~~~~~l~ivG~g~--------~~~~~ 262 (406)
T 2hy7_A 224 HAVAVGSMLFDPEF------FVVASKA---------------------------FPQVTFHVIGSGM--------GRHPG 262 (406)
T ss_dssp EEEEECCTTBCHHH------HHHHHHH---------------------------CTTEEEEEESCSS--------CCCTT
T ss_pred EEEEEeccccccCH------HHHHHHh---------------------------CCCeEEEEEeCch--------HHhcC
Confidence 89999999999998 3333343 6899999999997 55667
Q ss_pred C-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH-------cCCCcEEEeccCccccceecCCcEEE
Q 014316 340 L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF-------GCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 340 l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam-------a~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
+ ++|+|+|. ++.+++.++|++||++|+| |..|++|++++||| |||+|||+|+. +.++.+|++
T Consensus 263 l~~~V~f~G~-~~~~~l~~~~~~adv~v~p---s~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l 332 (406)
T 2hy7_A 263 YGDNVIVYGE-MKHAQTIGYIKHARFGIAP---YASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRF 332 (406)
T ss_dssp CCTTEEEECC-CCHHHHHHHHHTCSEEECC---BSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEE
T ss_pred CCCCEEEcCC-CCHHHHHHHHHhcCEEEEC---CCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEE
Confidence 7 48999997 9999999999999999997 77899999999999 99999999988 667889999
Q ss_pred -e--CChHHHHHHHHHhc
Q 014316 412 -F--SSSSELADQLLVNA 426 (427)
Q Consensus 412 -~--~~~~~la~~l~~~~ 426 (427)
+ +|+++||++|.++.
T Consensus 333 ~v~~~d~~~la~ai~~ll 350 (406)
T 2hy7_A 333 GYTPGNADSVIAAITQAL 350 (406)
T ss_dssp EECTTCHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHH
Confidence 8 68999999998763
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-27 Score=232.47 Aligned_cols=237 Identities=12% Similarity=-0.001 Sum_probs=167.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|++. ...+.+.++++..++|++++.|+. .. ......+. ....++.+.+.+|.++++|+..++
T Consensus 94 ~~pDvv~~~~~~--~~~~~~~~~~~~~~ip~v~~~~~~-~~-----~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~ 163 (375)
T 3beo_A 94 AKPDIVLVHGDT--TTTFIASLAAFYNQIPVGHVEAGL-RT-----WDKYSPYP--EEMNRQLTGVMADLHFSPTAKSAT 163 (375)
T ss_dssp HCCSEEEEETTS--HHHHHHHHHHHHTTCCEEEESCCC-CC-----SCTTSSTT--HHHHHHHHHHHCSEEEESSHHHHH
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccc-cc-----ccccCCCh--hHhhhhHHhhhhheeeCCCHHHHH
Confidence 799999998732 233335567778899999877765 21 01101110 122333455679999999999999
Q ss_pred HHHHhhCCe---EEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 180 ELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
.+.+ +|.+ +.+++|+ |...+.+... ....+. . .+
T Consensus 164 ~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~---------------------------------~~~~~~----~--~~- 202 (375)
T 3beo_A 164 NLQK-ENKDESRIFITGNTAIDALKTTVKET---------------------------------YSHPVL----E--KL- 202 (375)
T ss_dssp HHHH-TTCCGGGEEECCCHHHHHHHHHCCSS---------------------------------CCCHHH----H--TT-
T ss_pred HHHH-cCCCcccEEEECChhHhhhhhhhhhh---------------------------------hhHHHH----H--hc-
Confidence 8876 4553 8899987 3222211100 000000 0 11
Q ss_pred CCCCeEEEEEeecCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.+++++||+.+. ||++.|++|++.+.++ .|++++++ |+|+. +.+++
T Consensus 203 ~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i~-~~g~~-~~~~~ 253 (375)
T 3beo_A 203 GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVVY-PVHMN-PVVRE 253 (375)
T ss_dssp TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEEE-ECCSC-HHHHH
T ss_pred cCCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEEE-eCCCC-HHHHH
Confidence 2345578899999876 9999999999999876 78898654 77775 34555
Q ss_pred HHHHc-CC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCcEE
Q 014316 334 KIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGL 410 (427)
Q Consensus 334 ~~~~l-~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~G~ 410 (427)
.++++ +. ++|.|+|. ++.+++..+|+.||++|+| | |.+++||||||+|||+++ .|+.+|+++++ +|+
T Consensus 254 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~ 323 (375)
T 3beo_A 254 TANDILGDYGRIHLIEP-LDVIDFHNVAARSYLMLTD---S-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLK 323 (375)
T ss_dssp HHHHHHTTCTTEEEECC-CCHHHHHHHHHTCSEEEEC---C-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEE
T ss_pred HHHHHhhccCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceE
Confidence 55554 43 58999996 8888999999999999986 4 667999999999999996 59999999877 999
Q ss_pred Ee-CChHHHHHHHHHhc
Q 014316 411 LF-SSSSELADQLLVNA 426 (427)
Q Consensus 411 l~-~~~~~la~~l~~~~ 426 (427)
++ .|+++|+++|.++.
T Consensus 324 ~v~~d~~~la~~i~~ll 340 (375)
T 3beo_A 324 LAGTDEETIFSLADELL 340 (375)
T ss_dssp ECCSCHHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHH
Confidence 99 78899999998763
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-26 Score=228.42 Aligned_cols=240 Identities=14% Similarity=0.071 Sum_probs=166.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|++. ...+.+.++++..++|++++.|+... ......+. ......++.+.+|.++++|+..++
T Consensus 85 ~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 85 FKPDVVLVHGDT--TTTLATSLAAFYQRIPVGHVEAGLRT------GDLYSPWP--EEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HCCSEEEEETTC--HHHHHHHHHHHTTTCCEEEESCCCCC------SCTTSSTT--HHHHHHHHHTTCSEEEESSHHHHH
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccccc------ccccCCCc--hHhhHHHHHhhccEEEcCcHHHHH
Confidence 799999999731 22333556777889999999888621 01101110 011223345779999999999999
Q ss_pred HHHHhhCCe---EEEecCC--CCCCcCCCC----hHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 180 ELAQNWGIK---ATVLYDQ--PPEFFHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~--~~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
.+.+ +|.+ +.+++|+ +...+.+.. ...+.+ .+.+
T Consensus 155 ~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~------------------------------------~~~~ 197 (384)
T 1vgv_A 155 NLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSE------------------------------------LAAN 197 (384)
T ss_dssp HHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHH------------------------------------HHTT
T ss_pred HHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHH------------------------------------HHHh
Confidence 8865 4653 8888887 211110000 000001 1112
Q ss_pred cc-cCCCCCeEEEEEeecCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC-
Q 014316 251 VF-LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP- 326 (427)
Q Consensus 251 ~~-~~~~~~~~i~~~g~~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~- 326 (427)
++ .+++++.+++++||+.+. ||++.|++|++.+.++ .|+++|+++ |.++
T Consensus 198 ~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~~g~~~~ 250 (384)
T 1vgv_A 198 YPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLNPN 250 (384)
T ss_dssp CTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCHH
T ss_pred ccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCCHH
Confidence 23 334455678899999876 9999999999999876 788998885 5443
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-Cccccceec
Q 014316 327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKV 405 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-~g~~e~v~~ 405 (427)
..+.+++++.. .++|.|+|. ++.+++.++|+.||++|+| | |..++||||||+|||+++. |+..|++++
T Consensus 251 ~~~~l~~~~~~--~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~ 319 (384)
T 1vgv_A 251 VREPVNRILGH--VKNVILIDP-QEYLPFVWLMNHAWLILTD---S-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA 319 (384)
T ss_dssp HHHHHHHHHTT--CTTEEEECC-CCHHHHHHHHHHCSEEEES---S-----STGGGTGGGGTCCEEEESSCCSCHHHHHH
T ss_pred HHHHHHHHhhc--CCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----cchHHHHHHcCCCEEEccCCCCcchhhhC
Confidence 23333333221 358999996 8889999999999999986 4 3358999999999999986 999999988
Q ss_pred CCcEEEe-CChHHHHHHHHHh
Q 014316 406 DKNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 406 ~~~G~l~-~~~~~la~~l~~~ 425 (427)
+ +|+++ .|+++|+++|.++
T Consensus 320 g-~g~lv~~d~~~la~~i~~l 339 (384)
T 1vgv_A 320 G-TVRLVGTDKQRIVEEVTRL 339 (384)
T ss_dssp T-SEEEECSSHHHHHHHHHHH
T ss_pred C-ceEEeCCCHHHHHHHHHHH
Confidence 8 99999 6889999998875
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=226.11 Aligned_cols=223 Identities=14% Similarity=0.102 Sum_probs=162.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||.++.......+ +.++ .+..|+++++|++..+. + . ....+..+|.++++|+..++
T Consensus 281 ~~~Div~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~-----~--~---------~~~~~~~~d~~i~~s~~~~~ 341 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGGRP-EVFA--LRPAPVQVNWLAYPGTS-----G--A---------PWMDYVLGDAFALPPALEPF 341 (568)
T ss_dssp TTCSEEEECSSCTTCSSC-HHHH--TCCSSEEEEESSSSSCC-----C--C---------TTCCEEEECTTTSCTTTGGG
T ss_pred CCCCEEEECCCCCCcchH-HHHh--cCCCceeEeeecCCccc-----C--C---------CCceEEEECCCcCCcccccC
Confidence 899999986533221111 2222 23568888998763210 0 0 01122358889999986553
Q ss_pred HHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCe
Q 014316 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (427)
Q Consensus 180 ~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (427)
++.++.+|||. |.+..... ..... ..+.+++++.+ .
T Consensus 342 -----~~~~i~~ipn~----~~~~~~~~-----------------------------~~~~~----~~r~~~~~~~~-~- 377 (568)
T 2vsy_A 342 -----YSEHVLRLQGA----FQPSDTSR-----------------------------VVAEP----PSRTQCGLPEQ-G- 377 (568)
T ss_dssp -----CSSEEEECSSC----SCCCCTTC-----------------------------CCCCC----CCTGGGTCCTT-S-
T ss_pred -----CcceeEcCCCc----CCCCCCCC-----------------------------CCCCC----CCccccCCCCC-C-
Confidence 55668999994 22211000 00000 02223344433 3
Q ss_pred EEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CCCChHHHHHHHHHc
Q 014316 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKIRRL 338 (427)
Q Consensus 260 ~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G~~~~~~~~~~~~l 338 (427)
+++++|++.+ ||++.+++|++.+.++ .|+++|+|+| +|+..+.+++.++++
T Consensus 378 ~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~~~~~~~ 429 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLRAFAHAQ 429 (568)
T ss_dssp CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHHHHHHHT
T ss_pred EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHHHHHHHc
Confidence 4669999999 9999999999999876 7899999999 999999999999999
Q ss_pred CCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE-------eccC-------ccccc
Q 014316 339 RLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA-------VSYS-------CIEEL 402 (427)
Q Consensus 339 ~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa-------s~~~-------g~~e~ 402 (427)
|++ +|.|+|. ++.+++.++|+.||++|+| |.. ++|++++|||+||+|||+ |++| |++|+
T Consensus 430 ~l~~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~ 504 (568)
T 2vsy_A 430 GVDAQRLVFMPK-LPHPQYLARYRHADLFLDT---HPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEM 504 (568)
T ss_dssp TCCGGGEEEECC-CCHHHHHHHGGGCSEEECC---SSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGG
T ss_pred CCChhHEEeeCC-CCHHHHHHHHhcCCEEeeC---CCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhh
Confidence 984 7999998 8889999999999999997 666 999999999999999999 9999 99998
Q ss_pred eecCCcEEEeCChHHHHHHHHHhc
Q 014316 403 VKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 403 v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
+.+ |+++++++|.++.
T Consensus 505 v~~--------~~~~la~~i~~l~ 520 (568)
T 2vsy_A 505 NVA--------DDAAFVAKAVALA 520 (568)
T ss_dssp BCS--------SHHHHHHHHHHHH
T ss_pred hcC--------CHHHHHHHHHHHh
Confidence 855 8888998887653
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-23 Score=205.99 Aligned_cols=281 Identities=15% Similarity=0.086 Sum_probs=186.2
Q ss_pred EeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCc-ccccCCCceE--EEEeecCCCCCCCCcchhhHHHHHHHHHHH
Q 014316 11 VLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIH--IHTMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (427)
Q Consensus 11 ~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~-~~~~~~~~i~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (427)
...+.|....+...+..|.++ | +|.+.+....... ..... .++. ++ +| . . . ...+.+++.+
T Consensus 46 h~~s~G~~~~~~~L~~~L~~~-~-~v~v~~~~~~~~~~~~~~~-~~v~~~~~-~p---~--~----~---~~~l~~~l~~ 109 (374)
T 2xci_A 46 HTASIGEFNTFLPILKELKRE-H-RILLTYFSPRAREYLKTKS-DFYDCLHP-LP---L--D----N---PFSVKRFEEL 109 (374)
T ss_dssp ECSSHHHHHHHHHHHHHHHHH-S-CEEEEESCGGGHHHHHTTG-GGCSEEEE-CC---C--S----S---HHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHHhc-C-CEEEEEcCCcHHHHHHHhc-ccccceeE-CC---C--C----C---HHHHHHHHHH
Confidence 444455544455667777776 7 8877765432211 11111 3554 44 44 1 1 1 1223333433
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccC
Q 014316 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA 167 (427)
Q Consensus 88 ~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 167 (427)
.+||++|++....++.. +....+ |+++..+... ... +.+++++.+
T Consensus 110 ------------~~pDiv~~~~~~~~~~~-----~~~~~~-p~~~~~~~~~---------~~~--------~~~~~~~~~ 154 (374)
T 2xci_A 110 ------------SKPKALIVVEREFWPSL-----IIFTKV-PKILVNAYAK---------GSL--------IEKILSKKF 154 (374)
T ss_dssp ------------HCCSEEEEESCCCCHHH-----HHHCCS-CEEEEEECCC---------CCH--------HHHHHHTTC
T ss_pred ------------hCCCEEEEECccCcHHH-----HHHHhC-CEEEEEeecC---------chH--------HHHHHHHhC
Confidence 78999998753333322 222333 8665433321 111 445667889
Q ss_pred CEEEEcCHHHHHHHHHhhCC-eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 168 NGCLCVTQAMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~-~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
|.++++|+.+++.+.+. |. ++.+++|+. |.+.... .
T Consensus 155 d~ii~~S~~~~~~l~~~-g~~ki~vi~n~~---f~~~~~~---------------------------------~------ 191 (374)
T 2xci_A 155 DLIIMRTQEDVEKFKTF-GAKRVFSCGNLK---FICQKGK---------------------------------G------ 191 (374)
T ss_dssp SEEEESCHHHHHHHHTT-TCCSEEECCCGG---GCCCCCS---------------------------------C------
T ss_pred CEEEECCHHHHHHHHHc-CCCeEEEcCCCc---cCCCcCh---------------------------------h------
Confidence 99999999999998764 65 488888862 2111100 0
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
. .+ ..+ ++++.|+. .||++.|++|++.+.++ .|+++|+|+|+|+
T Consensus 192 --~--~l--~~~-vi~~~~~~--~k~~~~ll~A~~~l~~~---------------------------~p~~~lvivG~g~ 235 (374)
T 2xci_A 192 --I--KL--KGE-FIVAGSIH--TGEVEIILKAFKEIKKT---------------------------YSSLKLILVPRHI 235 (374)
T ss_dssp --C--CC--SSC-EEEEEEEC--GGGHHHHHHHHHHHHTT---------------------------CTTCEEEEEESSG
T ss_pred --h--hh--cCC-EEEEEeCC--CchHHHHHHHHHHHHhh---------------------------CCCcEEEEECCCH
Confidence 0 01 113 56666653 58999999999998765 7899999999999
Q ss_pred Ch-HHHHHHHHHcCCC---------cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-c
Q 014316 327 DK-ESYEEKIRRLRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-S 395 (427)
Q Consensus 327 ~~-~~~~~~~~~l~l~---------~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~ 395 (427)
.+ ++++++++++|++ +|.|.|. .+|+..+|+.||++++| +|..|++|++++||||||+|||++ +
T Consensus 236 ~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~---~~dl~~~y~~aDv~vl~--ss~~e~gg~~~lEAmA~G~PVI~~~~ 310 (374)
T 2xci_A 236 ENAKIFEKKARDFGFKTSFFENLEGDVILVDR---FGILKELYPVGKIAIVG--GTFVNIGGHNLLEPTCWGIPVIYGPY 310 (374)
T ss_dssp GGHHHHHHHHHHTTCCEEETTCCCSSEEECCS---SSCHHHHGGGEEEEEEC--SSSSSSCCCCCHHHHTTTCCEEECSC
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCcEEEECC---HHHHHHHHHhCCEEEEC--CcccCCCCcCHHHHHHhCCCEEECCC
Confidence 77 5899999999875 4788776 79999999999999886 233467889999999999999976 6
Q ss_pred cCccccceecC-CcEEEe--CChHHHHHHHHHhc
Q 014316 396 YSCIEELVKVD-KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 396 ~~g~~e~v~~~-~~G~l~--~~~~~la~~l~~~~ 426 (427)
+++.+|++++. .+|+++ +|+++||++|.++.
T Consensus 311 ~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll 344 (374)
T 2xci_A 311 THKVNDLKEFLEKEGAGFEVKNETELVTKLTELL 344 (374)
T ss_dssp CTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH
Confidence 89999988652 345544 89999999998763
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-23 Score=188.60 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=122.9
Q ss_pred EEEEEeecC-CCCCHHHHHHHHHhhH--HHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHH
Q 014316 260 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 334 (427)
Q Consensus 260 ~i~~~g~~~-~~K~~~~Li~a~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~ 334 (427)
+|+|+|++. +.||++.+++|++.+. ++ .|+++|+|+|+|+ ..+.++++
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~---------------------------~~~~~l~i~G~~~~~~~~~l~~~ 90 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKE---------------------------FQEMRFIIIGKGDPELEGWARSL 90 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGG---------------------------GGGEEEEEECCBCHHHHHHHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhcc---------------------------CCCeEEEEECCCChHHHHHHHHH
Confidence 899999999 9999999999999986 44 5789999999998 78889999
Q ss_pred HHHcCCCcEEE-ecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC
Q 014316 335 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 413 (427)
Q Consensus 335 ~~~l~l~~V~f-~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~ 413 (427)
+++++ +|+| +|. ++.+++..+|+.||++++| |..|++|++++|||+||+|||+++.++..|++ ++.+|++++
T Consensus 91 ~~~~~--~v~~~~g~-~~~~~~~~~~~~ad~~l~p---s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~ 163 (200)
T 2bfw_A 91 EEKHG--NVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVK 163 (200)
T ss_dssp HHHCT--TEEEECSC-CCHHHHHHHHTTCSEEEEC---CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEEC
T ss_pred HHhcC--CEEEEecc-CCHHHHHHHHHHCCEEEEC---CCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEec
Confidence 99987 9999 997 9999999999999999997 77799999999999999999999999999999 999999994
Q ss_pred --ChHHHHHHHHHhc
Q 014316 414 --SSSELADQLLVNA 426 (427)
Q Consensus 414 --~~~~la~~l~~~~ 426 (427)
|+++++++|.++.
T Consensus 164 ~~~~~~l~~~i~~l~ 178 (200)
T 2bfw_A 164 AGDPGELANAILKAL 178 (200)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 8899999998763
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-23 Score=204.71 Aligned_cols=237 Identities=15% Similarity=0.052 Sum_probs=161.0
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||+|++. ...+.+.++++..++|+++..++. .+ ......+ .....++++.+.+|.++++|+..+
T Consensus 89 ~~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~-~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~ 158 (376)
T 1v4v_A 89 EMGADYVLVHGDT--LTTFAVAWAAFLEGIPVGHVEAGL-RS-----GNLKEPF--PEEANRRLTDVLTDLDFAPTPLAK 158 (376)
T ss_dssp HTTCSEEEEESSC--HHHHHHHHHHHHTTCCEEEETCCC-CC-----SCTTSST--THHHHHHHHHHHCSEEEESSHHHH
T ss_pred HcCCCEEEEeCCh--HHHHHHHHHHHHhCCCEEEEeCCC-cc-----ccccCCC--chHHHHHHHHHHhceeeCCCHHHH
Confidence 3799999999743 222334567788899986544433 11 0000111 012334556678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.+++|+-.+.+... ... . ..+.++ .
T Consensus 159 ~~l~~~-g~~~~ki~vi~n~~~d~~~~~----~~~------------------------------~----~~~~~~---~ 196 (376)
T 1v4v_A 159 ANLLKE-GKREEGILVTGQTGVDAVLLA----AKL------------------------------G----RLPEGL---P 196 (376)
T ss_dssp HHHHTT-TCCGGGEEECCCHHHHHHHHH----HHH------------------------------C----CCCTTC---C
T ss_pred HHHHHc-CCCcceEEEECCchHHHHhhh----hhh------------------------------h----HHHHhc---C
Confidence 988764 553 778887511111000 000 0 011111 1
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC-ChHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DKESYEE 333 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~-~~~~~~~ 333 (427)
+++.+++++||+...||++.+++|++.+.++ .|+++++++ |+|+ ..+.+++
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~~~l~~ 249 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVREAVFP 249 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHHHHHHH
T ss_pred CCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHHHHHHH
Confidence 3455778899998888999999999999876 678888886 7665 3455555
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccceecCCcEEEe
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v~~~~~G~l~ 412 (427)
+++. .++|.|+|. ++..++.++|+.||++|+| | + + .++||||||+|||++ ++++..+++++ .+|+++
T Consensus 250 ~~~~--~~~v~~~g~-~g~~~~~~~~~~ad~~v~~---S--~--g-~~lEA~a~G~PvI~~~~~~~~~~~~~~-g~g~lv 317 (376)
T 1v4v_A 250 VLKG--VRNFVLLDP-LEYGSMAALMRASLLLVTD---S--G--G-LQEEGAALGVPVVVLRNVTERPEGLKA-GILKLA 317 (376)
T ss_dssp HHTT--CTTEEEECC-CCHHHHHHHHHTEEEEEES---C--H--H-HHHHHHHTTCCEEECSSSCSCHHHHHH-TSEEEC
T ss_pred Hhcc--CCCEEEECC-CCHHHHHHHHHhCcEEEEC---C--c--C-HHHHHHHcCCCEEeccCCCcchhhhcC-CceEEC
Confidence 5432 358999986 7777999999999999986 4 2 2 388999999999988 47899998754 489999
Q ss_pred -CChHHHHHHHHHhc
Q 014316 413 -SSSSELADQLLVNA 426 (427)
Q Consensus 413 -~~~~~la~~l~~~~ 426 (427)
.|+++|+++|.++.
T Consensus 318 ~~d~~~la~~i~~ll 332 (376)
T 1v4v_A 318 GTDPEGVYRVVKGLL 332 (376)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 78999999998763
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.3e-22 Score=207.90 Aligned_cols=280 Identities=14% Similarity=0.054 Sum_probs=175.4
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhh-h--------hhcCCCch----H---HHHHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLL-S--------LSLGRRSH----F---VSIYRWIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~-~--------~~~~~~~~----~---~~~~~~~e~~ 162 (427)
.+|||+|+|. +.+..++.+++ +..++|.|+|+|+..+--. . ..+..... . ..-...+|+.
T Consensus 180 ~~pdIiH~HD---W~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHE---WLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEES---GGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCc---hhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 4599999999 55555455555 3568999999999832100 0 00000000 0 0012456888
Q ss_pred HhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChH--HHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 163 YGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
....||.|+|||+.++++++..++.+ -.+|+|| |.+.|.|.... .+.+...++...
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~-------------------- 316 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDF-------------------- 316 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHH--------------------
T ss_pred HHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHH--------------------
Confidence 88899999999999999998876665 2349999 98888875321 111111111100
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccC----------CCchhh-------
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNED----------DSTNEE------- 300 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~----------~~~~~~------- 300 (427)
.+......+.++.++..++..+||++ +.||++.+++|+..+.+...... .+ +-++..
T Consensus 317 ----l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~-~~~~vvafii~p~~~~~~~~~~l~~ 391 (725)
T 3nb0_A 317 ----VRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSG-SKKTVVAFIVMPAKNNSFTVEALKG 391 (725)
T ss_dssp ----HHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTT-CCCEEEEEEECCCCEEEECHHHHHH
T ss_pred ----HHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhcc-CCCcEEEEEEeCCCCCCCchhhhcc
Confidence 00000011123334555677789999 78999999999999987632210 00 000000
Q ss_pred ------------------------hhh--------hhhc-C------------------Ccc-c--CCCCE-EEEEEeCC
Q 014316 301 ------------------------VFL--------KEIS-D------------------GKQ-Y--LYPRL-LFIITGKG 325 (427)
Q Consensus 301 ------------------------~~~--------~~~~-~------------------~~~-~--~~~~~-~l~i~G~G 325 (427)
..+ ..+| + +.+ . ..|.+ .-.+.-
T Consensus 392 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~-- 469 (725)
T 3nb0_A 392 QAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVD-- 469 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETT--
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeeccc--
Confidence 000 0011 0 000 0 11111 111111
Q ss_pred CChHHHHHHHHHcCCC-c------EEEecCCCCcc------cHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 326 PDKESYEEKIRRLRLK-R------VAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 326 ~~~~~~~~~~~~l~l~-~------V~f~g~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
...+.+...++++++. + |.|.+.|++.+ ++.++|++||++|+| |.+|+||++++||||||+|||
T Consensus 470 ~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~P---S~~EgfGl~~LEAmA~G~PvI 546 (725)
T 3nb0_A 470 DANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFP---SYYEPWGYTPAECTVMGVPSI 546 (725)
T ss_dssp GGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECC---CSSBSSCHHHHHHHHTTCCEE
T ss_pred CCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEec---cccCCCCHHHHHHHHcCCCEE
Confidence 1234566777888873 2 89998889887 589999999999998 889999999999999999999
Q ss_pred EeccCccccceecC-------CcEEEe
Q 014316 393 AVSYSCIEELVKVD-------KNGLLF 412 (427)
Q Consensus 393 as~~~g~~e~v~~~-------~~G~l~ 412 (427)
+|+.||+.|+|.++ .+|+++
T Consensus 547 ~s~~gG~~d~V~dg~~~~~~~~tG~lV 573 (725)
T 3nb0_A 547 TTNVSGFGSYMEDLIETNQAKDYGIYI 573 (725)
T ss_dssp EETTBHHHHHHHTTSCHHHHHHTTEEE
T ss_pred EeCCCChhhhhhccccccCCCCceEEE
Confidence 99999999999875 369888
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-23 Score=180.38 Aligned_cols=135 Identities=14% Similarity=0.282 Sum_probs=121.1
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~ 337 (427)
+++|+|+|++.+.||++.+++|++.+++ .|+++|+|+|+|+..+.+++++++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~ 53 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK 53 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence 4689999999999999999999999853 478999999999999999999999
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC-cEEE-eccCccccceecCCcEEEeCCh
Q 014316 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCA-VSYSCIEELVKVDKNGLLFSSS 415 (427)
Q Consensus 338 l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~-PVIa-s~~~g~~e~v~~~~~G~l~~~~ 415 (427)
+++ +|.| |. ++.+++.++|+.||++|+| |..|++|++++||||||+ |||+ ++.|+..|++.++.+.+..+|+
T Consensus 54 ~~~-~v~~-g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~ 127 (166)
T 3qhp_A 54 LGV-KAEF-GF-VNSNELLEILKTCTLYVHA---ANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNA 127 (166)
T ss_dssp HTC-EEEC-CC-CCHHHHHHHHTTCSEEEEC---CCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCH
T ss_pred cCC-eEEE-ee-cCHHHHHHHHHhCCEEEEC---CcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCH
Confidence 988 8999 86 9999999999999999997 778999999999999997 9999 4589999999887773333789
Q ss_pred HHHHHHHHHhc
Q 014316 416 SELADQLLVNA 426 (427)
Q Consensus 416 ~~la~~l~~~~ 426 (427)
++++++|.++.
T Consensus 128 ~~l~~~i~~l~ 138 (166)
T 3qhp_A 128 KDLSAKIDWWL 138 (166)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998763
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=199.24 Aligned_cols=221 Identities=13% Similarity=0.061 Sum_probs=160.2
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
...++|+|++++|+.....+.+.++.++ +++|+|+.+||+ ++.... ... ...+.|+++++.||.|+++|+
T Consensus 71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl-~pl~~~----~~~---~~~~~E~~~y~~aD~Ii~~S~ 142 (339)
T 3rhz_A 71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDV-VPLMFS----GNF---YLMDRTIAYYNKADVVVAPSQ 142 (339)
T ss_dssp TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCC-HHHHCG----GGG---GGHHHHHHHHTTCSEEEESCH
T ss_pred cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEeccc-HHhhCc----cch---hhHHHHHHHHHHCCEEEECCH
Confidence 4578999999998754433334455553 399999999999 544321 111 223479999999999999999
Q ss_pred HHHHHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 176 AMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 176 ~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
.+++.+.+. |.+ +.++++.+.. .+.+ ..
T Consensus 143 ~~~~~l~~~-G~~~~ki~~~~~~~~~--~~~~----------------------------------------------~~ 173 (339)
T 3rhz_A 143 KMIDKLRDF-GMNVSKTVVQGMWDHP--TQAP----------------------------------------------MF 173 (339)
T ss_dssp HHHHHHHHT-TCCCSEEEECCSCCCC--CCCC----------------------------------------------CC
T ss_pred HHHHHHHHc-CCCcCceeecCCCCcc--Cccc----------------------------------------------cc
Confidence 999999774 554 3333332210 0000 00
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
.+.....|+|+|++..... +..+ .++++|.|+|+|+.+
T Consensus 174 -~~~~~~~i~yaG~l~k~~~-------L~~l------------------------------~~~~~f~ivG~G~~~---- 211 (339)
T 3rhz_A 174 -PAGLKREIHFPGNPERFSF-------VKEW------------------------------KYDIPLKVYTWQNVE---- 211 (339)
T ss_dssp -CCEEEEEEEECSCTTTCGG-------GGGC------------------------------CCSSCEEEEESCCCC----
T ss_pred -ccCCCcEEEEeCCcchhhH-------HHhC------------------------------CCCCeEEEEeCCccc----
Confidence 1112358999999984221 1111 257999999999875
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-----CCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-----GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-----~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
+ +.||+|+|. ++.++++.+++++|++++. .+.. ...+|.|++||||||+|||+++.++..++++++.
T Consensus 212 ----~--l~nV~f~G~-~~~~el~~~l~~~~~~lv~-~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~ 283 (339)
T 3rhz_A 212 ----L--PQNVHKINY-RPDEQLLMEMSQGGFGLVW-MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNG 283 (339)
T ss_dssp ----C--CTTEEEEEC-CCHHHHHHHHHTEEEEECC-CCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHT
T ss_pred ----C--cCCEEEeCC-CCHHHHHHHHHhCCEEEEE-CCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCC
Confidence 2 349999997 9999999999999999874 1111 1467999999999999999999999999999999
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
+|+++++.++++++|..+
T Consensus 284 ~G~~~~~~~e~~~~i~~l 301 (339)
T 3rhz_A 284 LGWIVKDVEEAIMKVKNV 301 (339)
T ss_dssp CEEEESSHHHHHHHHHHC
T ss_pred eEEEeCCHHHHHHHHHHh
Confidence 999999999999988765
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=181.29 Aligned_cols=139 Identities=20% Similarity=0.198 Sum_probs=125.8
Q ss_pred ccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
.++.+++ +|+|+|++.+.||++.+++|++.+ ++++|+|+|+|+..+.+
T Consensus 18 ~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~l 65 (177)
T 2f9f_A 18 KFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHA 65 (177)
T ss_dssp CCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTH
T ss_pred ccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHHH
Confidence 4455554 899999999999999999999874 47899999999988899
Q ss_pred HHHHH--HcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCc
Q 014316 332 EEKIR--RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 408 (427)
Q Consensus 332 ~~~~~--~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~ 408 (427)
+++++ ++++. +|.|+|. ++.+++..+|+.||++++| |..|++|++++||||||+|||+++.++..|++.++.+
T Consensus 66 ~~~~~~~~~~l~~~v~~~g~-~~~~e~~~~~~~adi~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~ 141 (177)
T 2f9f_A 66 ERYARKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLCT---AKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKT 141 (177)
T ss_dssp HHHHHHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTT
T ss_pred HHHHHhhhcccCCcEEEeCC-CCHHHHHHHHHhCCEEEeC---CCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCc
Confidence 99999 77885 8999997 9999999999999999997 6689999999999999999999999999999999999
Q ss_pred EEEe-CChHHHHHHHHHhc
Q 014316 409 GLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~-~~~~~la~~l~~~~ 426 (427)
|+++ +|.++++++|.++.
T Consensus 142 g~~~~~d~~~l~~~i~~l~ 160 (177)
T 2f9f_A 142 GYLVNADVNEIIDAMKKVS 160 (177)
T ss_dssp EEEECSCHHHHHHHHHHHH
T ss_pred cEEeCCCHHHHHHHHHHHH
Confidence 9998 78899999998764
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=200.30 Aligned_cols=244 Identities=9% Similarity=0.061 Sum_probs=161.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+|+||+|++ ....+..++... .++|+++++|.. ++.... . +.-+. .+.+-+.+ -.+|.+...+....
T Consensus 122 ~~~DiV~vHdy---hl~~l~~~lr~~~~~~~i~~~~H~p-fp~~~~-~-~~lp~---~~~il~~l-l~~d~i~f~~~~~~ 191 (482)
T 1uqt_A 122 QDDDIIWIHDY---HLLPFAHELRKRGVNNRIGFFLHIP-FPTPEI-F-NALPT---YDTLLEQL-CDYDLLGFQTENDR 191 (482)
T ss_dssp CTTCEEEEESG---GGTTHHHHHHHTTCCSCEEEECCSC-CCCHHH-H-TTSTT---HHHHHHHH-TTSSEEEESSHHHH
T ss_pred CCCCEEEEECc---hHHHHHHHHHHhCCCCcEEEEEcCC-CCCHHH-H-hhCcc---HHHHHHhh-hccCeEEEECHHHH
Confidence 46799999983 333334455443 489999999976 321100 0 00011 01111111 24677777776655
Q ss_pred HHHHH-----------------hhCC--eEEEecCC-CCCCcCCCC----hHHHHHHHhhhhhcccCCCCccccccCCCC
Q 014316 179 HELAQ-----------------NWGI--KATVLYDQ-PPEFFHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (427)
Q Consensus 179 ~~l~~-----------------~~~~--~~~vi~n~-~~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (427)
+.+.. .++. ++.++||| |.+.|.+.. .....++..
T Consensus 192 ~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~--------------------- 250 (482)
T 1uqt_A 192 LAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKA--------------------- 250 (482)
T ss_dssp HHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHH---------------------
T ss_pred HHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHH---------------------
Confidence 55432 1122 37889999 766654310 000112111
Q ss_pred CCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC
Q 014316 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (427)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
++. + ..+|+++||+.+.||++.+++|++.+.++ +
T Consensus 251 ---------------~~~---~-~~vil~VgRl~~~Kgi~~ll~A~~~ll~~---------------------------~ 284 (482)
T 1uqt_A 251 ---------------ELK---N-VQNIFSVERLDYSKGLPERFLAYEALLEK---------------------------Y 284 (482)
T ss_dssp ---------------HTT---T-CEEEEEECCBCGGGCHHHHHHHHHHHHHH---------------------------C
T ss_pred ---------------HhC---C-CEEEEEEeCCcccCCHHHHHHHHHHHHHh---------------------------C
Confidence 111 2 34899999999999999999999999876 4
Q ss_pred C----CEEEEEEeCC-----CC----hHHHHHHHHHcC-------CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC
Q 014316 315 P----RLLFIITGKG-----PD----KESYEEKIRRLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 374 (427)
Q Consensus 315 ~----~~~l~i~G~G-----~~----~~~~~~~~~~l~-------l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~ 374 (427)
| +++|+++|.+ +. ++++++++.+++ ...|.|++..++.+++.++|+.||++|+| |..
T Consensus 285 p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~p---S~~ 361 (482)
T 1uqt_A 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVT---PLR 361 (482)
T ss_dssp GGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEEC---CSS
T ss_pred ccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEEC---CCc
Confidence 4 4789999953 22 233445554432 22477654449999999999999999997 889
Q ss_pred CCCchHHHHHHcCCC-----cEEEeccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 375 LDLPMKVVDMFGCGL-----PVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 375 e~~p~~~lEama~G~-----PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
||||++++||||||+ |+|+|+.+|..+.+. +|+++ .|++++|++|.++.
T Consensus 362 EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL 417 (482)
T 1uqt_A 362 DGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRAL 417 (482)
T ss_dssp BSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHH
T ss_pred ccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHH
Confidence 999999999999997 999999888888772 78999 47899999998753
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-19 Score=178.06 Aligned_cols=238 Identities=15% Similarity=0.108 Sum_probs=156.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+|+++... ...+.+.++++..++|+++..++. .+ .....++ .... .+.+.+.+|.+++.|+..+
T Consensus 110 ~kPDvVi~~g~~--~~~~~~~~aa~~~~IPv~h~~ag~-rs-----~~~~~~~~~~~~---r~~~~~~a~~~~~~se~~~ 178 (396)
T 3dzc_A 110 EQPDVVLVHGDT--ATTFAASLAAYYQQIPVGHVEAGL-RT-----GNIYSPWPEEGN---RKLTAALTQYHFAPTDTSR 178 (396)
T ss_dssp HCCSEEEEETTS--HHHHHHHHHHHTTTCCEEEETCCC-CC-----SCTTSSTTHHHH---HHHHHHTCSEEEESSHHHH
T ss_pred cCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCc-cc-----cccccCCcHHHH---HHHHHHhcCEEECCCHHHH
Confidence 799999999732 333435678888999976433322 10 0111111 1121 2234678999999999999
Q ss_pred HHHHHhhCCe---EEEecCC--CCCCcCCCCh----HHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 179 HELAQNWGIK---ATVLYDQ--PPEFFHPTSL----EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~--~~~~f~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
+.+.+. |.+ +.++.|. |...+.+... ..+.+ +++
T Consensus 179 ~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~------------------------------------~r~ 221 (396)
T 3dzc_A 179 ANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTDMDLQAT------------------------------------LES 221 (396)
T ss_dssp HHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHH------------------------------------HHH
T ss_pred HHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHH------------------------------------HHH
Confidence 998764 654 7777775 2111100000 00011 122
Q ss_pred ccc-cCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC
Q 014316 250 DVF-LKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP 326 (427)
Q Consensus 250 ~~~-~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~ 326 (427)
+++ ++++++.++++.+|.. ..|+++.+++|++.+.++ +|++++++. |.++
T Consensus 222 ~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~---------------------------~~~~~~v~~~g~~~ 274 (396)
T 3dzc_A 222 QFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQ---------------------------HPECQILYPVHLNP 274 (396)
T ss_dssp TCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCH
T ss_pred HhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh---------------------------CCCceEEEEeCCCh
Confidence 234 2345555566666644 347899999999999876 788998885 6553
Q ss_pred ChHHHHHHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccce
Q 014316 327 DKESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELV 403 (427)
Q Consensus 327 ~~~~~~~~~~~-l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v 403 (427)
.+++.+++ ++. ++|.|.+. +..+++..+|+.||++|.+ | + ....|||++|+|||++ +.++..|++
T Consensus 275 ---~~~~~l~~~~~~~~~v~~~~~-lg~~~~~~l~~~ad~vv~~---S-G----g~~~EA~a~G~PvV~~~~~~~~~e~v 342 (396)
T 3dzc_A 275 ---NVREPVNKLLKGVSNIVLIEP-QQYLPFVYLMDRAHIILTD---S-G----GIQEEAPSLGKPVLVMRETTERPEAV 342 (396)
T ss_dssp ---HHHHHHHHHTTTCTTEEEECC-CCHHHHHHHHHHCSEEEES---C-S----GGGTTGGGGTCCEEECCSSCSCHHHH
T ss_pred ---HHHHHHHHHHcCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-c----cHHHHHHHcCCCEEEccCCCcchHHH
Confidence 34444444 233 58999997 7778999999999999875 4 2 2348999999999999 688888988
Q ss_pred ecCCcEEEeC-ChHHHHHHHHHh
Q 014316 404 KVDKNGLLFS-SSSELADQLLVN 425 (427)
Q Consensus 404 ~~~~~G~l~~-~~~~la~~l~~~ 425 (427)
++| .+++++ |+++|++++.++
T Consensus 343 ~~G-~~~lv~~d~~~l~~ai~~l 364 (396)
T 3dzc_A 343 AAG-TVKLVGTNQQQICDALSLL 364 (396)
T ss_dssp HHT-SEEECTTCHHHHHHHHHHH
T ss_pred HcC-ceEEcCCCHHHHHHHHHHH
Confidence 777 568884 689999998765
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=178.55 Aligned_cols=243 Identities=11% Similarity=-0.030 Sum_probs=163.9
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 101 SPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 101 ~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
..|+|.+|++ ...++..++.. ..+.++.+.+|-. |+.... + ..-+ ..+.+.+-+.+ -.+|.|.+-|....+
T Consensus 149 ~~D~VwVhDY---hL~llp~~lR~~~~~~~igfFlHiP-fPs~e~-f-~~Lp-~~~r~ell~gl-l~~DligF~t~~y~~ 220 (496)
T 3t5t_A 149 ADPVYLVHDY---QLVGVPALLREQRPDAPILLFVHIP-WPSADY-W-RILP-KEIRTGILHGM-LPATTIGFFADRWCR 220 (496)
T ss_dssp SSCEEEEESG---GGTTHHHHHHHHCTTSCEEEECCSC-CCCHHH-H-TTSC-HHHHHHHHHHH-TTSSEEEESSHHHHH
T ss_pred CCCEEEEeCc---cHhHHHHHHHhhCCCCeEEEEEcCC-CCCHHH-H-hhCc-HhHHHHHHHHH-HhCCEEEEecHHHHH
Confidence 5789999993 33333444443 4578899988866 311100 0 0001 00112222223 259999999998887
Q ss_pred HHHH----hh-C--------------C--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 180 ELAQ----NW-G--------------I--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 180 ~l~~----~~-~--------------~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
.+.+ .. + . ++.++|+| |.+.|.+...+.+.++
T Consensus 221 ~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~l-------------------------- 274 (496)
T 3t5t_A 221 NFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGI-------------------------- 274 (496)
T ss_dssp HHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTH--------------------------
T ss_pred HHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHH--------------------------
Confidence 6543 12 2 1 26788999 8888865431111111
Q ss_pred ccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC-
Q 014316 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR- 316 (427)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 316 (427)
+++++ + ..+|+++||+.+.||+..+++|+ .+.++ +|+
T Consensus 275 ----------r~~~~---~-~~lIl~VgRLd~~KGi~~lL~Af-~ll~~---------------------------~P~~ 312 (496)
T 3t5t_A 275 ----------EEWAD---G-HRLVVHSGRTDPIKNAERAVRAF-VLAAR---------------------------GGGL 312 (496)
T ss_dssp ----------HHHHT---T-SEEEEEEEESSGGGCHHHHHHHH-HHHHH---------------------------TSSC
T ss_pred ----------HHHhC---C-ceEEEEcccCccccCHHHHHHHH-HHHHh---------------------------Cccc
Confidence 11111 2 35899999999999999999999 87766 554
Q ss_pred --EEEEEEeC-----CCChHH----HHHHHHHcCC----CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHH
Q 014316 317 --LLFIITGK-----GPDKES----YEEKIRRLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 381 (427)
Q Consensus 317 --~~l~i~G~-----G~~~~~----~~~~~~~l~l----~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~ 381 (427)
+.|+++|. |+..++ +++++.+++. ..|.|+|. ++.+++.++|+.||++|+| |.+||||+++
T Consensus 313 ~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~-v~~~el~aly~~ADv~vv~---SlrEGfgLv~ 388 (496)
T 3t5t_A 313 EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDND-NDVNHTIACFRRADLLIFN---STVDGQNLST 388 (496)
T ss_dssp TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEC-CCHHHHHHHHHHCSEEEEC---CSSBSCCSHH
T ss_pred ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCC-CCHHHHHHHHHhccEEEEC---cccccCChhH
Confidence 67888863 333333 4444444432 26999998 8999999999999999997 8899999999
Q ss_pred HHHHcCC---CcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 382 VDMFGCG---LPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 382 lEama~G---~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+|||||| .|+|.|..+|..+.+ +.+|+++ .|++++|++|.++
T Consensus 389 ~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI~~a 435 (496)
T 3t5t_A 389 FEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAISAA 435 (496)
T ss_dssp HHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHHHHH
Confidence 9999997 899999988888888 3579999 5789999998764
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.1e-18 Score=170.38 Aligned_cols=234 Identities=17% Similarity=0.101 Sum_probs=154.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+|+++... ...+.+.++++..++|++....+. .+ .....++ . ....+++.+.+|.+++.|+..+
T Consensus 113 ~kPD~Vi~~gd~--~~~l~~~laA~~~~IPv~h~~agl-rs-----~~~~~~~p~---~~~r~~~~~~a~~~~~~se~~~ 181 (403)
T 3ot5_A 113 ENPDIVLVHGDT--TTSFAAGLATFYQQKMLGHVEAGL-RT-----WNKYSPFPE---EMNRQLTGVMADIHFSPTKQAK 181 (403)
T ss_dssp HCCSEEEEETTC--HHHHHHHHHHHHTTCEEEEESCCC-CC-----SCTTSSTTH---HHHHHHHHHHCSEEEESSHHHH
T ss_pred cCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCc-cc-----cccccCCcH---HHHHHHHHHhcCEEECCCHHHH
Confidence 799999999732 223335677888899975432222 10 0111111 1 1223345667999999999999
Q ss_pred HHHHHhhCCe---EEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 179 HELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
+.+.+. |.+ +.++.|. |...+.+... . +.. .+++ +
T Consensus 182 ~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~-~-------------------------------~~~-----~~~~--l 221 (403)
T 3ot5_A 182 ENLLAE-GKDPATIFVTGNTAIDALKTTVQKD-Y-------------------------------HHP-----ILEN--L 221 (403)
T ss_dssp HHHHHT-TCCGGGEEECCCHHHHHHHHHSCTT-C-------------------------------CCH-----HHHS--C
T ss_pred HHHHHc-CCCcccEEEeCCchHHHHHhhhhhh-c-------------------------------chH-----HHHh--c
Confidence 998774 554 7777764 2111111000 0 000 0111 1
Q ss_pred CCCCCeEEEEEeecCC-CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCCChHHH
Q 014316 254 KPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESY 331 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~-~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~~~~~~ 331 (427)
++++.++++.+|... .|+++.+++|+..+.++ +|++++++. |.++ .+
T Consensus 222 -~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~~---~~ 270 (403)
T 3ot5_A 222 -GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLNP---AV 270 (403)
T ss_dssp -TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSCH---HH
T ss_pred -cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCCH---HH
Confidence 344556677777543 46789999999999876 789998887 4443 34
Q ss_pred HHHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccceecCCc
Q 014316 332 EEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKN 408 (427)
Q Consensus 332 ~~~~~~-l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v~~~~~ 408 (427)
++.+++ ++. ++|.+++. ++.+++..+|+.||++|.+ | |...+|||++|+|+|++ +.++..|.++.| +
T Consensus 271 ~~~l~~~~~~~~~v~l~~~-l~~~~~~~l~~~ad~vv~~---S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~ 340 (403)
T 3ot5_A 271 REKAMAILGGHERIHLIEP-LDAIDFHNFLRKSYLVFTD---S-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-T 340 (403)
T ss_dssp HHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHEEEEEEC---C-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-S
T ss_pred HHHHHHHhCCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-c
Confidence 444444 343 58999998 8888999999999998864 3 33458999999999999 688888888655 8
Q ss_pred EEEeC-ChHHHHHHHHHh
Q 014316 409 GLLFS-SSSELADQLLVN 425 (427)
Q Consensus 409 G~l~~-~~~~la~~l~~~ 425 (427)
|++++ |.+++++++.++
T Consensus 341 ~~lv~~d~~~l~~ai~~l 358 (403)
T 3ot5_A 341 LKLIGTNKENLIKEALDL 358 (403)
T ss_dssp EEECCSCHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHH
Confidence 99995 889999998765
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6e-18 Score=170.23 Aligned_cols=314 Identities=13% Similarity=0.040 Sum_probs=178.6
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeec-------------CCC---C
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ-------------WPT---I 67 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~-------------~~~---~ 67 (427)
+++++++..+..|...++...+.+|.++ ||+|++++... ..+.....|++++.++. ... +
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPE 95 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCT
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCc
Confidence 4566665544333333456778888886 99999999753 23344456899998872 000 0
Q ss_pred CCCCcc-hhhHHHHHHHH-HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhh
Q 014316 68 PRGLPK-VLKPVLLLLKP-LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS 145 (427)
Q Consensus 68 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~ 145 (427)
...... .......+... ....+.-+..++ +..+||+|+++.. . +.+.++++..++|+|++.|+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~pDvVv~~~~-~----~~~~~aa~~~giP~v~~~~~~~~------ 163 (412)
T 3otg_A 96 GLTPEQLSELPQIVFGRVIPQRVFDELQPVI-ERLRPDLVVQEIS-N----YGAGLAALKAGIPTICHGVGRDT------ 163 (412)
T ss_dssp TCCHHHHTTSHHHHHHTHHHHHHHHHHHHHH-HHHCCSEEEEETT-C----HHHHHHHHHHTCCEEEECCSCCC------
T ss_pred cCChhHhhHHHHHHHhccchHHHHHHHHHHH-HhcCCCEEEECch-h----hHHHHHHHHcCCCEEEecccccC------
Confidence 000000 00000011111 000001111112 2369999999851 1 11456777889999998888632
Q ss_pred cCCCchHHHHHHHHHHHHh------------ccCCEEEEcCHHHHHHHHHhhCCe-EEEecCCCCCCcCCCChHHHHHHH
Q 014316 146 LGRRSHFVSIYRWIEKYYG------------KMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELF 212 (427)
Q Consensus 146 ~~~~~~~~~~~~~~e~~~~------------~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~ 212 (427)
.......+.+++.++.. ..+|.+++.+....+...+.+... ..+.+.+ ...
T Consensus 164 --~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------- 227 (412)
T 3otg_A 164 --PDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVP-------FAE------- 227 (412)
T ss_dssp --CSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCC-------CCC-------
T ss_pred --chhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccC-------CCC-------
Confidence 11111222233333322 356778888766555444332211 1111111 000
Q ss_pred hhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhc
Q 014316 213 CRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 292 (427)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~ 292 (427)
......|. ....++++.++++.|++. .++.+.+.++++.+.+
T Consensus 228 ------------------------~~~~~~~~------~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~------- 269 (412)
T 3otg_A 228 ------------------------QGDLPAWL------SSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG------- 269 (412)
T ss_dssp ------------------------CCCCCGGG------GGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT-------
T ss_pred ------------------------CCCCCCcc------ccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc-------
Confidence 00000000 011345567888899986 7787777777777653
Q ss_pred cCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccC
Q 014316 293 EDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 371 (427)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~ 371 (427)
. ++++++++ +++..+.+++ + -++|.|.|. + ++.++|+.||++|+.
T Consensus 270 ---------------------~-~~~~~~~~g~~~~~~~l~~----~-~~~v~~~~~-~---~~~~~l~~ad~~v~~--- 315 (412)
T 3otg_A 270 ---------------------L-DADVLVASGPSLDVSGLGE----V-PANVRLESW-V---PQAALLPHVDLVVHH--- 315 (412)
T ss_dssp ---------------------S-SSEEEEECCSSCCCTTCCC----C-CTTEEEESC-C---CHHHHGGGCSEEEES---
T ss_pred ---------------------C-CCEEEEEECCCCChhhhcc----C-CCcEEEeCC-C---CHHHHHhcCcEEEEC---
Confidence 2 45555555 4443443331 1 158999997 4 589999999999973
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccC----ccccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+ -+++++|||++|+|+|++..+ +..+.+.+...|+++. ++++|+++|.++
T Consensus 316 ~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~l 373 (412)
T 3otg_A 316 G----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRL 373 (412)
T ss_dssp C----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHH
T ss_pred C----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHH
Confidence 2 247999999999999997655 3678888889999993 779999998875
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-17 Score=162.52 Aligned_cols=287 Identities=19% Similarity=0.163 Sum_probs=167.4
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 014316 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (427)
Q Consensus 23 ~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (427)
..|.+|.++ ||+|+++|....- ..+.....|++++.++....+...+....+....+.+.+++...+ .+..+|
T Consensus 21 ala~~L~~~-g~~V~~vg~~~g~-e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~P 93 (365)
T 3s2u_A 21 ACAREFQAR-GYAVHWLGTPRGI-ENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRV-----IRQLRP 93 (365)
T ss_dssp HHHHHHHHT-TCEEEEEECSSST-HHHHTGGGTCCEEECC--------------CHHHHHHHHHHHHHH-----HHHHCC
T ss_pred HHHHHHHhC-CCEEEEEECCchH-hhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHH-----HHhcCC
Confidence 345556564 9999999854432 234445568888888732111111111222222223333332222 234899
Q ss_pred cEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHH
Q 014316 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (427)
Q Consensus 103 Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~ 182 (427)
|+|+++.. ..++. +.+++++.++|++++..|... + ...+++.+.++.+.+......
T Consensus 94 DvVi~~g~--~~s~p-~~laA~~~~iP~vihe~n~~~-------G----------~~nr~l~~~a~~v~~~~~~~~---- 149 (365)
T 3s2u_A 94 VCVLGLGG--YVTGP-GGLAARLNGVPLVIHEQNAVA-------G----------TANRSLAPIARRVCEAFPDTF---- 149 (365)
T ss_dssp SEEEECSS--STHHH-HHHHHHHTTCCEEEEECSSSC-------C----------HHHHHHGGGCSEEEESSTTSS----
T ss_pred CEEEEcCC--cchHH-HHHHHHHcCCCEEEEecchhh-------h----------hHHHhhccccceeeecccccc----
Confidence 99999862 33333 567788899999976665521 1 123456678888876543221
Q ss_pred HhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEE
Q 014316 183 QNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALV 261 (427)
Q Consensus 183 ~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 261 (427)
....+..+..|. ..+.+... +......++++.++
T Consensus 150 -~~~~k~~~~g~pvr~~~~~~~--------------------------------------------~~~~~~~~~~~~il 184 (365)
T 3s2u_A 150 -PASDKRLTTGNPVRGELFLDA--------------------------------------------HARAPLTGRRVNLL 184 (365)
T ss_dssp -CC---CEECCCCCCGGGCCCT--------------------------------------------TSSCCCTTSCCEEE
T ss_pred -cCcCcEEEECCCCchhhccch--------------------------------------------hhhcccCCCCcEEE
Confidence 001123333343 11111110 11123455566677
Q ss_pred EEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEEEeCCCChHHHHHHHHHcCC
Q 014316 262 VSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEEKIRRLRL 340 (427)
Q Consensus 262 ~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i~G~G~~~~~~~~~~~~l~l 340 (427)
++.|+....+..+.+.++++.+... .++. +.++|.+ +.+...+..++++.
T Consensus 185 v~gGs~g~~~~~~~~~~al~~l~~~----------------------------~~~~vi~~~G~~-~~~~~~~~~~~~~~ 235 (365)
T 3s2u_A 185 VLGGSLGAEPLNKLLPEALAQVPLE----------------------------IRPAIRHQAGRQ-HAEITAERYRTVAV 235 (365)
T ss_dssp ECCTTTTCSHHHHHHHHHHHTSCTT----------------------------TCCEEEEECCTT-THHHHHHHHHHTTC
T ss_pred EECCcCCccccchhhHHHHHhcccc----------------------------cceEEEEecCcc-ccccccceeccccc
Confidence 8888988887778888888877532 2344 4455554 34556666666653
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--------ccceecCCcEEEe
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVKVDKNGLLF 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~--------~e~v~~~~~G~l~ 412 (427)
++.+.++ .+++.++|+.||++|+ ..+ ++++.|+|++|+|+|....+.. .+.+.+...|+++
T Consensus 236 -~~~v~~f---~~dm~~~l~~aDlvI~----raG---~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l 304 (365)
T 3s2u_A 236 -EADVAPF---ISDMAAAYAWADLVIC----RAG---ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL 304 (365)
T ss_dssp -CCEEESC---CSCHHHHHHHCSEEEE----CCC---HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC
T ss_pred -ccccccc---hhhhhhhhccceEEEe----cCC---cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe
Confidence 5777898 7899999999999996 222 5789999999999998875532 2356666778888
Q ss_pred C----ChHHHHHHHHHh
Q 014316 413 S----SSSELADQLLVN 425 (427)
Q Consensus 413 ~----~~~~la~~l~~~ 425 (427)
. ++++|+++|.++
T Consensus 305 ~~~~~~~~~L~~~i~~l 321 (365)
T 3s2u_A 305 PQKSTGAAELAAQLSEV 321 (365)
T ss_dssp CTTTCCHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHH
Confidence 3 468899988775
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-15 Score=152.79 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=86.6
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EEEeCCCChHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i~G~G~~~~~~~~~ 334 (427)
+++.++++.|++. .++.+.+.+++..+.+ .+++++ +++|+|++.+.++
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~-- 279 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG-- 279 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC--
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc--
Confidence 4456888999998 5555554444444421 246777 5789887655442
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEE
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGL 410 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~ 410 (427)
++ -++|.|.|. ++. . ++|+.||++|.. + -+++++|||++|+|+|++..++ ..+.+.+...|+
T Consensus 280 --~~-~~~v~~~~~-~~~--~-~~l~~ad~~v~~---~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~ 345 (430)
T 2iyf_A 280 --EL-PDNVEVHDW-VPQ--L-AILRQADLFVTH---A----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVAR 345 (430)
T ss_dssp --SC-CTTEEEESS-CCH--H-HHHTTCSEEEEC---C----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEE
T ss_pred --cC-CCCeEEEec-CCH--H-HHhhccCEEEEC---C----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEE
Confidence 12 158999996 654 3 789999998862 1 1368999999999999998765 466677788999
Q ss_pred EeC----ChHHHHHHHHHh
Q 014316 411 LFS----SSSELADQLLVN 425 (427)
Q Consensus 411 l~~----~~~~la~~l~~~ 425 (427)
++. +.++|+++|.++
T Consensus 346 ~~~~~~~~~~~l~~~i~~l 364 (430)
T 2iyf_A 346 KLATEEATADLLRETALAL 364 (430)
T ss_dssp ECCCC-CCHHHHHHHHHHH
T ss_pred EcCCCCCCHHHHHHHHHHH
Confidence 984 679999998775
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.3e-16 Score=155.29 Aligned_cols=123 Identities=11% Similarity=0.069 Sum_probs=79.1
Q ss_pred CCCCeEEEEEeecCCCC----------CHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC
Q 014316 255 PNRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 324 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K----------~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~ 324 (427)
++++.++++.|++...+ .+..++++++.+ +++++++|+
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~ 272 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVS 272 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCC
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeC
Confidence 45566888889996544 455556555442 478888888
Q ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec----cCccc
Q 014316 325 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIE 400 (427)
Q Consensus 325 G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~----~~g~~ 400 (427)
|+..+.++ .+ .++|.+.|+ + ++.+++..||++|.. +-+.++.|||++|+|+|+.. ..+..
T Consensus 273 ~~~~~~l~----~~-~~~v~~~~~-~---~~~~ll~~ad~~v~~-------gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 273 DKLAQTLQ----PL-PEGVLAAGQ-F---PLSAIMPACDVVVHH-------GGHGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp C------------C-CTTEEEESC-C---CHHHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred Ccchhhhc----cC-CCcEEEeCc-C---CHHHHHhhCCEEEec-------CCHHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 76544333 22 258999996 5 478899999999952 23578999999999999954 44677
Q ss_pred cceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 401 ELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 401 e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+.+.+...|+++. +.++|+++|.++
T Consensus 337 ~~~~~~g~g~~~~~~~~~~~~l~~ai~~l 365 (398)
T 4fzr_A 337 RLLHAAGAGVEVPWEQAGVESVLAACARI 365 (398)
T ss_dssp HHHHHTTSEEECC-------CHHHHHHHH
T ss_pred HHHHHcCCEEecCcccCCHHHHHHHHHHH
Confidence 8888999999984 678899888765
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-14 Score=144.61 Aligned_cols=123 Identities=18% Similarity=0.145 Sum_probs=84.5
Q ss_pred CCCCeEEEEEeecCCCC--CHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EEEeCCCChHHH
Q 014316 255 PNRPALVVSSTSWTPDE--DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESY 331 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K--~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i~G~G~~~~~~ 331 (427)
++++.++++.|+....+ .+..++++++. .+ +++ +++|++.+.+.+
T Consensus 229 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~-------------------------------~~-~~~~~~~g~~~~~~~~ 276 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEHPEFFRACAQAFAD-------------------------------TP-WHVVMAIGGFLDPAVL 276 (402)
T ss_dssp TTCCEEEEECCSCSSCCHHHHHHHHHHHTT-------------------------------SS-CEEEEECCTTSCGGGG
T ss_pred CCCCEEEEECCCCCcchHHHHHHHHHHHhc-------------------------------CC-cEEEEEeCCcCChhhh
Confidence 45567888889987665 23333333322 33 444 557777655443
Q ss_pred HHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-----CccccceecC
Q 014316 332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-----SCIEELVKVD 406 (427)
Q Consensus 332 ~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-----~g~~e~v~~~ 406 (427)
++ + -++|.+.++ ++. . +++..||++|.. .+ ..+++|||++|+|+|.... .+..+.+.+.
T Consensus 277 ~~----~-~~~v~~~~~-~~~--~-~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~ 340 (402)
T 3ia7_A 277 GP----L-PPNVEAHQW-IPF--H-SVLAHARACLTH----GT---TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL 340 (402)
T ss_dssp CS----C-CTTEEEESC-CCH--H-HHHTTEEEEEEC----CC---HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT
T ss_pred CC----C-CCcEEEecC-CCH--H-HHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc
Confidence 32 1 258999997 544 3 999999999862 11 2588999999999995544 4677788888
Q ss_pred CcEEEeC----ChHHHHHHHHHh
Q 014316 407 KNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 407 ~~G~l~~----~~~~la~~l~~~ 425 (427)
..|.++. ++++|++++.++
T Consensus 341 g~g~~~~~~~~~~~~l~~~~~~l 363 (402)
T 3ia7_A 341 GLGSVLRPDQLEPASIREAVERL 363 (402)
T ss_dssp TSEEECCGGGCSHHHHHHHHHHH
T ss_pred CCEEEccCCCCCHHHHHHHHHHH
Confidence 9999883 678999988765
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=152.61 Aligned_cols=127 Identities=11% Similarity=0.126 Sum_probs=93.5
Q ss_pred CCCCeEEEEEeecCCCCCH-HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~-~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.++++.|+....++. ..+++++... ++ .|+++++++|+|+..+.++
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~---------------------------~p~~~~v~~~~~~~~~~l~- 266 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TE---------------------------LPGVEAVIAVPPEHRALLT- 266 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT---------------------------STTEEEEEECCGGGGGGCT-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc---------------------------CCCeEEEEEECCcchhhcc-
Confidence 4456677888998765444 6677777666 54 6789999999886544332
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec----cCccccceecCCc
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKN 408 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~----~~g~~e~v~~~~~ 408 (427)
++ ++|.+.|+ ++. .+++..||++|.. +-+.+++|||++|+|+|+.. ..+..+.+.+...
T Consensus 267 -----~~~~~v~~~~~-~~~---~~ll~~ad~~v~~-------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~ 330 (391)
T 3tsa_A 267 -----DLPDNARIAES-VPL---NLFLRTCELVICA-------GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGA 330 (391)
T ss_dssp -----TCCTTEEECCS-CCG---GGTGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTS
T ss_pred -----cCCCCEEEecc-CCH---HHHHhhCCEEEeC-------CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCC
Confidence 23 58999986 665 4456999999962 23468999999999999954 4556777888899
Q ss_pred EEEeCC------hHHHHHHHHHhc
Q 014316 409 GLLFSS------SSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~~------~~~la~~l~~~~ 426 (427)
|+++.. +++|++++.++.
T Consensus 331 g~~~~~~~~~~~~~~l~~ai~~ll 354 (391)
T 3tsa_A 331 GICLPDEQAQSDHEQFTDSIATVL 354 (391)
T ss_dssp EEECCSHHHHTCHHHHHHHHHHHH
T ss_pred EEecCcccccCCHHHHHHHHHHHH
Confidence 999954 789999987753
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.5e-15 Score=146.78 Aligned_cols=119 Identities=16% Similarity=0.101 Sum_probs=85.7
Q ss_pred CCCCeEEEEEeecCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.++++.|++... ++.+.+.++++.+.+ . +++++++|++++.+.++
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~----------------------------~-~~~~v~~~g~~~~~~l~- 279 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGE----------------------------V-DADFVLALGDLDISPLG- 279 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT----------------------------S-SSEEEEECTTSCCGGGC-
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHc----------------------------C-CCEEEEEECCcChhhhc-
Confidence 4556788888998554 344455555554432 2 57888888887654433
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE----eccCccc--cceecC
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA----VSYSCIE--ELVKVD 406 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa----s~~~g~~--e~v~~~ 406 (427)
++ +||.+.|+ + ++.+++..||++|.. +-+.++.|||++|+|+|+ .+..+.. +.+.+.
T Consensus 280 -----~~~~~v~~~~~-~---~~~~ll~~ad~~v~~-------~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~ 343 (398)
T 3oti_A 280 -----TLPRNVRAVGW-T---PLHTLLRTCTAVVHH-------GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR 343 (398)
T ss_dssp -----SCCTTEEEESS-C---CHHHHHTTCSEEEEC-------CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH
T ss_pred -----cCCCcEEEEcc-C---CHHHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC
Confidence 23 58999997 4 578899999999962 234689999999999999 4557777 889899
Q ss_pred CcEEEeC----ChHHHH
Q 014316 407 KNGLLFS----SSSELA 419 (427)
Q Consensus 407 ~~G~l~~----~~~~la 419 (427)
..|++++ +.++++
T Consensus 344 g~g~~~~~~~~~~~~l~ 360 (398)
T 3oti_A 344 GIGLVSTSDKVDADLLR 360 (398)
T ss_dssp TSEEECCGGGCCHHHHH
T ss_pred CCEEeeCCCCCCHHHHH
Confidence 9999983 356666
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-13 Score=136.34 Aligned_cols=92 Identities=15% Similarity=0.145 Sum_probs=67.3
Q ss_pred EEEEE-EeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 317 LLFII-TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 317 ~~l~i-~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
+++++ +|++++.+.++ .+ ++|.+.++ ++.. +++..||++|.. .+ ..++.|||++|+|+|+.
T Consensus 277 ~~~v~~~g~~~~~~~l~------~~~~~v~~~~~-~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 277 WHVVMTLGGQVDPAALG------DLPPNVEAHRW-VPHV---KVLEQATVCVTH----GG---MGTLMEALYWGRPLVVV 339 (415)
T ss_dssp CEEEEECTTTSCGGGGC------CCCTTEEEESC-CCHH---HHHHHEEEEEES----CC---HHHHHHHHHTTCCEEEC
T ss_pred cEEEEEeCCCCChHHhc------CCCCcEEEEec-CCHH---HHHhhCCEEEEC----Cc---HHHHHHHHHhCCCEEEe
Confidence 66655 77776554443 23 58999986 5543 889999999962 11 25899999999999995
Q ss_pred c----cCccccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 395 S----YSCIEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 395 ~----~~g~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
. .....+.+.+...|..+. ++++|++++.++
T Consensus 340 p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 378 (415)
T 3rsc_A 340 PQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAV 378 (415)
T ss_dssp CCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHH
Confidence 4 444667777888898883 678999998765
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-13 Score=132.51 Aligned_cols=121 Identities=13% Similarity=0.111 Sum_probs=86.9
Q ss_pred CCCeEEEEEeecCCC-------CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 256 NRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~-------K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
+++.++++.|++... +.+..++++++.+ ++++++++++++.
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~~ 256 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW--------------------------------DVELIVAAPDTVA 256 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT--------------------------------TCEEEEECCHHHH
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC--------------------------------CcEEEEEeCCCCH
Confidence 445688899998865 5677778877642 4677776554322
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----ccccee
Q 014316 329 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK 404 (427)
Q Consensus 329 ~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~ 404 (427)
+.++ .+ -++|.+ |. ++ ..++|..||++|.. +-++++.|||++|+|+|+....+ ..+.+.
T Consensus 257 ~~l~----~~-~~~v~~-~~-~~---~~~~l~~~d~~v~~-------~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~ 319 (384)
T 2p6p_A 257 EALR----AE-VPQARV-GW-TP---LDVVAPTCDLLVHH-------AGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVA 319 (384)
T ss_dssp HHHH----HH-CTTSEE-EC-CC---HHHHGGGCSEEEEC-------SCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred HhhC----CC-CCceEE-cC-CC---HHHHHhhCCEEEeC-------CcHHHHHHHHHhCCCEEEccCcccchHHHHHHH
Confidence 2222 22 147888 75 65 46789999999962 12358999999999999998643 666677
Q ss_pred cCCcEEEeC----ChHHHHHHHHHh
Q 014316 405 VDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 405 ~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+...|++++ +.++++++|.++
T Consensus 320 ~~g~g~~~~~~~~~~~~l~~~i~~l 344 (384)
T 2p6p_A 320 DYGAAIALLPGEDSTEAIADSCQEL 344 (384)
T ss_dssp HHTSEEECCTTCCCHHHHHHHHHHH
T ss_pred HCCCeEecCcCCCCHHHHHHHHHHH
Confidence 788899884 578999988765
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=132.34 Aligned_cols=233 Identities=15% Similarity=0.117 Sum_probs=148.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+|+++..... .+ +.++++..++|+++...+. .+ .....+ .. ...+.+.+.+|.+++.|+..++
T Consensus 93 ~kPD~Vlv~gd~~~--~~-aalaA~~~~IPv~h~eagl-rs-----~~~~~p-ee---~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 93 EKPDAVLFYGDTNS--CL-SAIAAKRRKIPIFHMEAGN-RC-----FDQRVP-EE---INRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HCCSEEEEESCSGG--GG-GHHHHHHTTCCEEEESCCC-CC-----SCTTST-HH---HHHHHHHHHCSEEEESSHHHHH
T ss_pred cCCcEEEEECCchH--HH-HHHHHHHhCCCEEEEeCCC-cc-----ccccCc-HH---HHHHHHHhhhceeecCCHHHHH
Confidence 79999999974322 22 2567778899965433333 11 111111 11 1223455679999999999999
Q ss_pred HHHHhhCCe---EEEecCCCCCCcCCC-ChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 180 ELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
++.+. |.+ +.++.|.-.+.+... +...+.+ .++++++++
T Consensus 160 ~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~------------------------------------~~~~lgl~~ 202 (385)
T 4hwg_A 160 YLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSD------------------------------------ILDKLSLTP 202 (385)
T ss_dssp HHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCC------------------------------------HHHHTTCCT
T ss_pred HHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhH------------------------------------HHHHcCCCc
Confidence 98764 554 677766411111000 0000001 222334444
Q ss_pred CCCeEEEEEeecC---CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~---~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
++.++++.+|.+ ..|++..+++|+..+.++ + ++.+++... +..+
T Consensus 203 -~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~~----p~~~ 249 (385)
T 4hwg_A 203 -KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFSTH----PRTK 249 (385)
T ss_dssp -TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEEC----HHHH
T ss_pred -CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEECC----hHHH
Confidence 455677777643 447789999999998764 3 566666543 2456
Q ss_pred HHHHHc-C-C---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecC
Q 014316 333 EKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVD 406 (427)
Q Consensus 333 ~~~~~l-~-l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~ 406 (427)
+.++++ + + ++|.+.+. ++..++..+++.||+++.. | |....||+++|+|+|+.... +..|.++.|
T Consensus 250 ~~l~~~~~~~~~~~~v~l~~~-lg~~~~~~l~~~adlvvt~---S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G 320 (385)
T 4hwg_A 250 KRLEDLEGFKELGDKIRFLPA-FSFTDYVKLQMNAFCILSD---S-----GTITEEASILNLPALNIREAHERPEGMDAG 320 (385)
T ss_dssp HHHHTSGGGGGTGGGEEECCC-CCHHHHHHHHHHCSEEEEC---C-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT
T ss_pred HHHHHHHHHhcCCCCEEEEcC-CCHHHHHHHHHhCcEEEEC---C-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC
Confidence 666665 4 3 47999887 7888999999999999953 3 33679999999999998743 467777665
Q ss_pred CcEEEeC-ChHHHHHHHHHh
Q 014316 407 KNGLLFS-SSSELADQLLVN 425 (427)
Q Consensus 407 ~~G~l~~-~~~~la~~l~~~ 425 (427)
++++++ |.+++++++.++
T Consensus 321 -~~~lv~~d~~~i~~ai~~l 339 (385)
T 4hwg_A 321 -TLIMSGFKAERVLQAVKTI 339 (385)
T ss_dssp -CCEECCSSHHHHHHHHHHH
T ss_pred -ceEEcCCCHHHHHHHHHHH
Confidence 678884 889999998775
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.7e-10 Score=115.16 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=67.5
Q ss_pred CEEE-EEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 316 RLLF-IITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 316 ~~~l-~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
++++ +++|.+.+.+.++ .+ ++|.+.+. ++.. ++|..||++|. ++ =.++++|||++|+|+|+
T Consensus 284 ~~~~~~~~g~~~~~~~~~------~~~~~v~~~~~-~~~~---~~l~~~d~~v~-----~~--G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 284 DWHVVLSVGRFVDPADLG------EVPPNVEVHQW-VPQL---DILTKASAFIT-----HA--GMGSTMEALSNAVPMVA 346 (424)
T ss_dssp SSEEEEECCTTSCGGGGC------SCCTTEEEESS-CCHH---HHHTTCSEEEE-----CC--CHHHHHHHHHTTCCEEE
T ss_pred CcEEEEEECCcCChHHhc------cCCCCeEEecC-CCHH---HHHhhCCEEEE-----CC--chhHHHHHHHcCCCEEE
Confidence 4566 5678776544332 23 58999985 6653 78999999885 11 13689999999999999
Q ss_pred eccCc----cccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 394 VSYSC----IEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g----~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
....+ ..+.+.+.+.|+.+. +.++++++|.++
T Consensus 347 ~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 386 (424)
T 2iya_A 347 VPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAV 386 (424)
T ss_dssp CCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHH
T ss_pred ecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHH
Confidence 98643 445666778898884 678999988765
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.21 E-value=8.4e-11 Score=119.78 Aligned_cols=122 Identities=14% Similarity=0.061 Sum_probs=86.6
Q ss_pred CCCCeEEEEEeecCC-----CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH
Q 014316 255 PNRPALVVSSTSWTP-----DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~-----~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~ 329 (427)
++++.++++.|++.. .+.+..+++|++.+ ++++++++++++.+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~ 312 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE 312 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence 445668888999875 47888888888653 46777777665433
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----ccccee
Q 014316 330 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK 404 (427)
Q Consensus 330 ~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~ 404 (427)
.++ ++ ++|.+.++ ++. .++|..||++|+- +-+.++.|||++|+|+|+....+ ..+.+.
T Consensus 313 ~l~------~~~~~v~~~~~-~~~---~~ll~~ad~~V~~-------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 375 (441)
T 2yjn_A 313 GVA------NIPDNVRTVGF-VPM---HALLPTCAATVHH-------GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ 375 (441)
T ss_dssp SCS------SCCSSEEECCS-CCH---HHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred hhc------cCCCCEEEecC-CCH---HHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHH
Confidence 221 23 48999996 664 5678999999961 12468999999999999998743 566777
Q ss_pred cCCcEEEeC----ChHHHHHHHHHh
Q 014316 405 VDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 405 ~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+...|++++ ++++|+++|.++
T Consensus 376 ~~g~g~~~~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 376 EFGAGIALPVPELTPDQLRESVKRV 400 (441)
T ss_dssp HHTSEEECCTTTCCHHHHHHHHHHH
T ss_pred HcCCEEEcccccCCHHHHHHHHHHH
Confidence 788999884 678999988765
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=4.7e-09 Score=105.74 Aligned_cols=122 Identities=15% Similarity=0.105 Sum_probs=83.2
Q ss_pred CCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.++++.|+.. +.+.+..+++++..+ ++++++.++++..+.
T Consensus 219 ~~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~vv~~~g~~~~~~--- 263 (404)
T 3h4t_A 219 AGSPPVYVGFGSGPAPAEAARVAIEAVRAQ--------------------------------GRRVVLSSGWAGLGR--- 263 (404)
T ss_dssp TSSCCEEECCTTSCCCTTHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCCC---
T ss_pred cCCCeEEEECCCCCCcHHHHHHHHHHHHhC--------------------------------CCEEEEEeCCccccc---
Confidence 34566788889987 666677777777653 355555544332221
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc----ccceecCCc
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI----EELVKVDKN 408 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~----~e~v~~~~~ 408 (427)
.+. +||.+.++ ++. .+++..+|++|.- .+ ..++.|++++|+|+|.....+- .+.+.+.+.
T Consensus 264 ----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~~----gG---~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~ 328 (404)
T 3h4t_A 264 ----IDEGDDCLVVGE-VNH---QVLFGRVAAVVHH----GG---AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGV 328 (404)
T ss_dssp ----SSCCTTEEEESS-CCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ----ccCCCCEEEecC-CCH---HHHHhhCcEEEEC----Cc---HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCC
Confidence 122 58999986 654 6788999999962 11 1489999999999999875542 344666778
Q ss_pred EEEeC----ChHHHHHHHHHhc
Q 014316 409 GLLFS----SSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~----~~~~la~~l~~~~ 426 (427)
|..+. +.++|++++.++.
T Consensus 329 g~~l~~~~~~~~~l~~ai~~ll 350 (404)
T 3h4t_A 329 GVAHDGPTPTVESLSAALATAL 350 (404)
T ss_dssp EEECSSSSCCHHHHHHHHHHHT
T ss_pred EeccCcCCCCHHHHHHHHHHHh
Confidence 88873 5789999888763
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.03 E-value=4.4e-08 Score=103.12 Aligned_cols=106 Identities=15% Similarity=0.067 Sum_probs=79.9
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE--EEeCCC-ChHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI--ITGKGP-DKESYEEK 334 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--i~G~G~-~~~~~~~~ 334 (427)
.++++..++ ..|..+.++++++.+.++ .|+..+. +.|+++ ..+.+.+.
T Consensus 441 ~v~Fg~fn~--~~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g~~~~~~~~ 491 (631)
T 3q3e_A 441 VVNIGIAST--TMKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNGITHPYVER 491 (631)
T ss_dssp EEEEEEEEC--STTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCGGGHHHHHH
T ss_pred eEEEEECCc--cccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCchhhHHHHHH
Confidence 345666665 468899999999999887 7776653 367432 12334444
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 335 ~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
+.+.|+ ++|.|.|. ++.++..+.|+.+|+++.| +.. +-|++.+|||+||+|||+...+
T Consensus 492 ~~~~GI~~Rv~F~g~-~p~~e~la~y~~aDIfLDp---fpy-~GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 492 FIKSYLGDSATAHPH-SPYHQYLRILHNCDMMVNP---FPF-GNTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp HHHHHHGGGEEEECC-CCHHHHHHHHHTCSEEECC---SSS-CCSHHHHHHHHTTCCEEEECCS
T ss_pred HHHcCCCccEEEcCC-CCHHHHHHHHhcCcEEEeC---Ccc-cCChHHHHHHHcCCCEEeccCC
Confidence 566778 48999998 9999999999999999975 333 4589999999999999996533
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-08 Score=102.30 Aligned_cols=118 Identities=13% Similarity=0.041 Sum_probs=81.7
Q ss_pred CCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE-EeCCCChHHHHHH
Q 014316 257 RPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEEK 334 (427)
Q Consensus 257 ~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-~G~G~~~~~~~~~ 334 (427)
++.++++.|+.. +.+..+.++++++.+ + .++++ +|.+....
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~-------------------------------~-~~~v~~~g~~~~~~----- 280 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH-------------------------------G-RRVILSRGWADLVL----- 280 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT-------------------------------T-CCEEECTTCTTCCC-----
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC-------------------------------C-CeEEEEeCCCcccc-----
Confidence 355888889984 777777777877653 2 34444 47664320
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcE
Q 014316 335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNG 409 (427)
Q Consensus 335 ~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G 409 (427)
.++ ++|.+.+. ++.. +++..||++|.- + =.+++.|||++|+|+|+....+ ..+.+.+.+.|
T Consensus 281 ---~~~~~~v~~~~~-~~~~---~~l~~~d~~v~~-----~--G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g 346 (415)
T 1iir_A 281 ---PDDGADCFAIGE-VNHQ---VLFGRVAAVIHH-----G--GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVG 346 (415)
T ss_dssp ---SSCGGGEEECSS-CCHH---HHGGGSSEEEEC-----C--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSE
T ss_pred ---cCCCCCEEEeCc-CChH---HHHhhCCEEEeC-----C--ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCc
Confidence 123 48999885 7754 568999999962 1 1269999999999999997644 45667777889
Q ss_pred EEeC----ChHHHHHHHHHh
Q 014316 410 LLFS----SSSELADQLLVN 425 (427)
Q Consensus 410 ~l~~----~~~~la~~l~~~ 425 (427)
+.++ +.++++++|.++
T Consensus 347 ~~~~~~~~~~~~l~~~i~~l 366 (415)
T 1iir_A 347 VAHDGPIPTFDSLSAALATA 366 (415)
T ss_dssp EECSSSSCCHHHHHHHHHHH
T ss_pred ccCCcCCCCHHHHHHHHHHH
Confidence 9884 678999998765
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.3e-09 Score=105.72 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=74.9
Q ss_pred CCCCCeEEEEEeecCCCCC-HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 254 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~-~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
.++++.++++.|++...++ .+.+.+++..+.+ .+..+++.+.+...+..
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~~- 283 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLALL- 283 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCCC-
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCcccccc-
Confidence 4455667777788765443 3344444444432 23555555544332211
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCC
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~ 407 (427)
..+ +||.+.+ |++. .++|..+|++|. ++ =.+++.|||++|+|+|+....+ ..+.+.+..
T Consensus 284 -----~~~~~~v~~~~-~~p~---~~lL~~~~~~v~-----h~--G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G 347 (400)
T 4amg_A 284 -----GELPANVRVVE-WIPL---GALLETCDAIIH-----HG--GSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG 347 (400)
T ss_dssp -----CCCCTTEEEEC-CCCH---HHHHTTCSEEEE-----CC--CHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHT
T ss_pred -----ccCCCCEEEEe-ecCH---HHHhhhhhheec-----cC--CccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCC
Confidence 123 5898877 4764 677899999885 22 3458999999999999976443 455666677
Q ss_pred cEEEeCChHHHHHHHHH
Q 014316 408 NGLLFSSSSELADQLLV 424 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~ 424 (427)
.|+.+++.+..+++|.+
T Consensus 348 ~g~~l~~~~~~~~al~~ 364 (400)
T 4amg_A 348 IGFDAEAGSLGAEQCRR 364 (400)
T ss_dssp SEEECCTTTCSHHHHHH
T ss_pred CEEEcCCCCchHHHHHH
Confidence 88888655444555544
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-07 Score=95.84 Aligned_cols=118 Identities=12% Similarity=0.007 Sum_probs=80.6
Q ss_pred CCeEEEEEeecC---CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE-EeCCCChHHHH
Q 014316 257 RPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYE 332 (427)
Q Consensus 257 ~~~~i~~~g~~~---~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-~G~G~~~~~~~ 332 (427)
++.++++.|+.. +.+.+..++++++.+ +.++++ +|.++.. .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~- 281 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ--------------------------------GRRVILSRGWTELV--L- 281 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC--C-
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCcccc--c-
Confidence 355778888875 345556666666542 244554 4766431 1
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCC
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~ 407 (427)
..+ +++.+.+. ++. .+++..||++|+ ++ =.+++.||+++|+|+|+....+ ..+.+.+..
T Consensus 282 -----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~-----~~--G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g 345 (416)
T 1rrv_A 282 -----PDDRDDCFAIDE-VNF---QALFRRVAAVIH-----HG--SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALG 345 (416)
T ss_dssp -----SCCCTTEEEESS-CCH---HHHGGGSSEEEE-----CC--CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHT
T ss_pred -----cCCCCCEEEecc-CCh---HHHhccCCEEEe-----cC--ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCC
Confidence 123 48999885 764 667899999996 21 1359999999999999987543 455666778
Q ss_pred cEEEeC----ChHHHHHHHHHh
Q 014316 408 NGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~----~~~~la~~l~~~ 425 (427)
.|+.++ +.++++++|.++
T Consensus 346 ~g~~~~~~~~~~~~l~~~i~~l 367 (416)
T 1rrv_A 346 IGVAHDGPTPTFESLSAALTTV 367 (416)
T ss_dssp SEEECSSSCCCHHHHHHHHHHH
T ss_pred CccCCCCCCCCHHHHHHHHHHh
Confidence 888873 568899988765
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=9.7e-09 Score=90.51 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=87.8
Q ss_pred CCCeEEEEEeecC---CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~---~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
+++.++++.|++. +.|.+..++++++. . +.+++++++|+..+
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~-------------------------------~-~~~~~~~~g~~~~~--- 64 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQ-------------------------------I-PQKVLWRFDGNKPD--- 64 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTT-------------------------------S-SSEEEEECCSSCCT---
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHh-------------------------------C-CCeEEEEECCcCcc---
Confidence 4466889999986 56677777777754 2 25677777665422
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC----ccccceecCC
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~~~~ 407 (427)
++ ++|.|.|+ ++.+++..+ ..||++|+. +-++++.|||++|+|+|+.... +..+.+.+..
T Consensus 65 ------~~~~~v~~~~~-~~~~~~l~~-~~ad~~I~~-------~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g 129 (170)
T 2o6l_A 65 ------TLGLNTRLYKW-IPQNDLLGH-PKTRAFITH-------GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARG 129 (170)
T ss_dssp ------TCCTTEEEESS-CCHHHHHTS-TTEEEEEEC-------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTT
T ss_pred ------cCCCcEEEecC-CCHHHHhcC-CCcCEEEEc-------CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcC
Confidence 23 48999996 776544332 999999962 1357999999999999999864 3466777888
Q ss_pred cEEEeC----ChHHHHHHHHHh
Q 014316 408 NGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~----~~~~la~~l~~~ 425 (427)
.|++++ +.++|+++|.++
T Consensus 130 ~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 130 AAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp SEEECCTTTCCHHHHHHHHHHH
T ss_pred CeEEeccccCCHHHHHHHHHHH
Confidence 999984 678999998875
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=2.2e-06 Score=92.09 Aligned_cols=138 Identities=12% Similarity=0.110 Sum_probs=102.4
Q ss_pred CeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-ChHHHHHH-
Q 014316 258 PALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESYEEK- 334 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~~~~~~~- 334 (427)
..+++++.|+..+|+.+. ++..+..+.+- .+.+......+.|++.|+|. ..+..++.
T Consensus 526 ~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~aK~iI 585 (796)
T 1l5w_A 526 AIFDIQIKRLHEYKRQHLNLLHILALYKEI--------------------RENPQADRVPRVFLFGAKAAPGYYLAKNII 585 (796)
T ss_dssp SEEEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HTCTTCCCCCEEEEEECCCCTTCHHHHHHH
T ss_pred cceEeeeecchhhcccCEeHHHHHHHHHHH--------------------hcCCCCCCCCeEEEEEecCChhHHHHHHHH
Confidence 358999999999999999 88888887652 11111122459999999885 33333222
Q ss_pred --HHHc--------CC-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 335 --IRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 335 --~~~l--------~l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
+..+ .+ + +|.|+.. .+.+-...++.+||+.+.| |. .|.+|+.=+=+|..|.+.|++-.|..
T Consensus 586 k~i~~va~~in~Dp~~~~~lKVvfl~n-Y~vslA~~I~~gaDv~l~~---S~a~~EAsGTs~MKam~NGaL~iGtLDGan 661 (796)
T 1l5w_A 586 FAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQI---STAGKEASGTGNMKLALNGALTVGTLDGAN 661 (796)
T ss_dssp HHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEEC---CCTTTCCCCSHHHHHHHTTCEEEECSCTTH
T ss_pred HHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeecC---CCCCCCCCchHHHHHHHcCCeeecCcCCee
Confidence 2222 23 2 5998876 7888889999999999997 55 59999999999999999999998888
Q ss_pred ccceec--CCcEEEeC-ChHHHH
Q 014316 400 EELVKV--DKNGLLFS-SSSELA 419 (427)
Q Consensus 400 ~e~v~~--~~~G~l~~-~~~~la 419 (427)
.|+.++ .+|||+|+ +++++.
T Consensus 662 vEi~e~vG~~NgF~FG~~~~ev~ 684 (796)
T 1l5w_A 662 VEIAEKVGEENIFIFGHTVEQVK 684 (796)
T ss_dssp HHHHHHHCGGGSEECSCCHHHHH
T ss_pred eehhhccCCCcEEEecCCHHHHH
Confidence 887654 56999994 445544
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=98.12 E-value=0.00024 Score=70.05 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=73.0
Q ss_pred cCCCCCeEEEEEeecCCCCC--HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 253 LKPNRPALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~--~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
+.++++.+.+..|.-.+.|. .+.+.+.+..+.++ ++.+++.|...+.+.
T Consensus 181 ~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~~ 231 (349)
T 3tov_A 181 LTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLEM 231 (349)
T ss_dssp CCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHHH
T ss_pred CCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHHH
Confidence 34455656666665334444 46777877777654 467778887666666
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.++..+.++-..+.+.|. .+..++.++++.||++|.. . .|..=+ |.|+|+|+|+--
T Consensus 232 ~~~i~~~~~~~~~~l~g~-~sl~e~~ali~~a~~~i~~---D----sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 232 VQPVVEQMETKPIVATGK-FQLGPLAAAMNRCNLLITN---D----SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHTCSSCCEECTTC-CCHHHHHHHHHTCSEEEEE---S----SHHHHH-HHTTTCCEEEEC
T ss_pred HHHHHHhcccccEEeeCC-CCHHHHHHHHHhCCEEEEC---C----CCHHHH-HHhcCCCEEEEE
Confidence 676766655334677776 8889999999999999974 2 233344 899999999864
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=98.06 E-value=0.0001 Score=71.83 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=69.8
Q ss_pred CCCCeEEEEEee-cCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 255 PNRPALVVSSTS-WTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 255 ~~~~~~i~~~g~-~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
.+++.+++..|. ..+.|.. +.+.+++..+.++ +++++++|...+.+..
T Consensus 178 ~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~-----------------------------~~~vvl~g~~~e~~~~ 228 (348)
T 1psw_A 178 SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-----------------------------GYQVVLFGSAKDHEAG 228 (348)
T ss_dssp SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-----------------------------TCEEEECCCGGGHHHH
T ss_pred CCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC-----------------------------CCeEEEEeChhhHHHH
Confidence 345666677776 5555554 4788887777652 5788888866555545
Q ss_pred HHHHHHcCC---Cc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 332 EEKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 332 ~~~~~~l~l---~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+++.+.++- .+ +.+.|. .+..++.++++.||++|.. +++ .+-.|.|+|+|+|+--
T Consensus 229 ~~i~~~~~~~~~~~~~~l~g~-~sl~e~~ali~~a~l~I~~---Dsg-----~~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 229 NEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVTN---DSG-----LMHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTTCCEEEEE
T ss_pred HHHHHhhhhccccceEeccCc-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEEEEE
Confidence 555443321 13 466676 8889999999999999974 322 3444999999999864
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00082 Score=64.32 Aligned_cols=66 Identities=11% Similarity=0.065 Sum_probs=51.4
Q ss_pred EEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 318 LFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 318 ~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
..++.|.|. ..+++++.+++. .++.+.++ .+++.++|++||++|+. -|+++.|++++|+|.|....
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~~---~~~m~~~m~~aDlvI~~--------gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFID---HENIAKLMNESNKLIIS--------ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTC--SSEEEEES---CSCHHHHHHTEEEEEEE--------SSHHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHhhC--CCEEEEeC---HHHHHHHHHHCCEEEEC--------CcHHHHHHHHcCCCEEEEeC
Confidence 346677764 456666665543 48999998 89999999999999973 24699999999999998764
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00011 Score=79.10 Aligned_cols=224 Identities=13% Similarity=0.012 Sum_probs=137.5
Q ss_pred HHHhccCCEEEEcCHHHHHHHHH--------hhCCeEEEecCC-CCCCcCC-CChHHHHHHHhhhhhcccCCCCcccccc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQ--------NWGIKATVLYDQ-PPEFFHP-TSLEEKHELFCRLNKILHQPLGVQDCVS 230 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~--------~~~~~~~vi~n~-~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (427)
+.....|+.|-+||....+.++. .++.+..-|-|| +...+-. +.++...-+-..++. ..|..-+.-
T Consensus 397 ~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~--~~w~~d~~~-- 472 (796)
T 2c4m_A 397 WIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGS--DDWVTDLDE-- 472 (796)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSS--SGGGGCGGG--
T ss_pred HHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCc--hhhhhChHH--
Confidence 45556899999999988877763 224458889999 6665521 122222112122210 000000000
Q ss_pred CCCCCCC-ccchhh-----------hcc----ccccccc--CCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhh
Q 014316 231 NGMEGQK-ADETIF-----------TSL----AGIDVFL--KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAIL 291 (427)
Q Consensus 231 ~~~~~~~-~~~~~~-----------~~~----~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~ 291 (427)
.....+ +++..| +.. +.+..++ .++. .+++++.|+..+|+.+. ++..+..+.+-
T Consensus 473 -l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~-l~~~~vkRlheYKRq~Lnil~ii~~~~~i----- 545 (796)
T 2c4m_A 473 -LKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPES-IFDVQIKRLHEYKRQLMNALYVLDLYFRI----- 545 (796)
T ss_dssp -GGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEECCCCGGGTHHHHHHHHHHHHHHH-----
T ss_pred -HHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-cEEEEeecchhhcccCEeHHHHHHHHHHH-----
Confidence 000000 112111 000 1223332 3443 58999999999999999 88888887642
Q ss_pred ccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-ChHHHHHH---HHHc--------CC-C--cEEEecCCCCcccHH
Q 014316 292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESYEEK---IRRL--------RL-K--RVAFRTMWLSAEDYP 356 (427)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~~~~~~~---~~~l--------~l-~--~V~f~g~~~~~~~~~ 356 (427)
.+.+......+.|++.|+|. ..+..++. +..+ .+ + +|.|+.. .+.+-..
T Consensus 546 ---------------~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~n-Y~vslA~ 609 (796)
T 2c4m_A 546 ---------------KEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVEN-YNVSPAE 609 (796)
T ss_dssp ---------------HTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETT-CCHHHHH
T ss_pred ---------------hhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHH
Confidence 01111112358999999885 33332222 2222 23 3 5998877 7888889
Q ss_pred HHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCccccceec--CCcEEEeCC
Q 014316 357 LLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV--DKNGLLFSS 414 (427)
Q Consensus 357 ~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~~e~v~~--~~~G~l~~~ 414 (427)
.++.+||+.+.| |. .|.+|+.=+=+|..|.+.|++-.|...|+.++ .+|||+|+.
T Consensus 610 ~I~~gaDv~l~~---S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~ 668 (796)
T 2c4m_A 610 HILPASDVSEQI---STAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGA 668 (796)
T ss_dssp HHGGGCSEEEEC---CCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESC
T ss_pred HHhhhcceeecC---CCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecC
Confidence 999999999997 55 59999999999999999999998888887654 469999954
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00018 Score=77.62 Aligned_cols=137 Identities=13% Similarity=0.069 Sum_probs=100.0
Q ss_pred CeEEEEEeecCCCCCHHHH-HHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-ChHHH----
Q 014316 258 PALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESY---- 331 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~L-i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~~~~---- 331 (427)
..+++++.|+..+|+.+.+ +..+..+.+- .+.+..+.....|++.|+|. ..+..
T Consensus 550 ~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~aK~iI 609 (824)
T 2gj4_A 550 SLFDVQVKRIHEYKRQLLNCLHVITLYNRI--------------------KKEPNKFVVPRTVMIGGKAAPGYHMAKMII 609 (824)
T ss_dssp SEEEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HHCTTSCCCCEEEEEECCCCTTCHHHHHHH
T ss_pred cceEeeeecchhhcchhhHHHHHHHHHHHH--------------------HhCCCCCCCCEEEEEEEeCCHhHHHHHHHH
Confidence 3589999999999999998 7888777531 01111122258999999885 33332
Q ss_pred ---HHHHHHcC----C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 332 ---EEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 332 ---~~~~~~l~----l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
.+.++..+ + + +|.|+.. .+.+-...++.+||+.+.| |. .|.+|+.=+=+|..|.+.|+|-.|..
T Consensus 610 kli~~va~~in~Dp~v~~~lKVvFl~n-YdvslA~~I~~gaDv~l~~---S~ag~EAsGTs~MKamlNGaLtigtlDGan 685 (824)
T 2gj4_A 610 KLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQI---STAGTEASGTGNMKFMLNGALTIGTMDGAN 685 (824)
T ss_dssp HHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEEC---CCTTSCSCCSHHHHHHHTTCEEEECSCTTH
T ss_pred HHHHHHHHHhccCcccCCceEEEEECC-CCHHHHHHHhhhcceeecC---CCCCCCCCchHHHHHHHcCceEEEEecCcc
Confidence 33333321 1 2 5888876 6888889999999999997 54 59999999999999999999988877
Q ss_pred cccee--cCCcEEEeCC-hHHH
Q 014316 400 EELVK--VDKNGLLFSS-SSEL 418 (427)
Q Consensus 400 ~e~v~--~~~~G~l~~~-~~~l 418 (427)
.|+.+ .++|||+|+. .+++
T Consensus 686 vEi~e~vG~~Ngf~FG~~~~ev 707 (824)
T 2gj4_A 686 VEMAEEAGEENFFIFGMRVEDV 707 (824)
T ss_dssp HHHHHHHCGGGSEECSCCHHHH
T ss_pred chhhhccCCCCEEEeCCcHHHH
Confidence 67654 4678999954 5555
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.052 Score=55.22 Aligned_cols=74 Identities=15% Similarity=0.033 Sum_probs=51.6
Q ss_pred cEEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccc-eecCCcEEEe-C
Q 014316 342 RVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLF-S 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~-v~~~~~G~l~-~ 413 (427)
++...+ |+++. ++|. ++|++|. ++ =.+++.|++++|+|+|+....+ .... +.+-+.|+.+ .
T Consensus 333 ~~~v~~-w~pq~---~vL~h~~~~~fvt-----h~--G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~ 401 (463)
T 2acv_A 333 KGMICG-WAPQV---EVLAHKAIGGFVS-----HC--GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 401 (463)
T ss_dssp SEEEES-SCCHH---HHHHSTTEEEEEE-----CC--CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCS
T ss_pred CEEEEc-cCCHH---HHhCCCccCeEEe-----cC--CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEec
Confidence 677777 78764 5676 6777774 32 1248999999999999987533 2334 4667788877 2
Q ss_pred ---------ChHHHHHHHHHhc
Q 014316 414 ---------SSSELADQLLVNA 426 (427)
Q Consensus 414 ---------~~~~la~~l~~~~ 426 (427)
+.++++++|.++.
T Consensus 402 ~~~~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 402 DYRKGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp SCCTTCCCCCHHHHHHHHHHHT
T ss_pred ccCCCCccccHHHHHHHHHHHH
Confidence 3588988887753
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.08 Score=53.84 Aligned_cols=77 Identities=14% Similarity=0.215 Sum_probs=53.5
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~~-- 413 (427)
+|+...+ |+++ .++|+.+++.++. +++ | .++++|++++|+|+|+-...+ ....+.+. +.|+.++
T Consensus 327 ~~~~vv~-w~Pq---~~vL~h~~v~~fv---tH~-G-~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~ 397 (454)
T 3hbf_A 327 TKGKIVA-WAPQ---VEILKHSSVGVFL---THS-G-WNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG 397 (454)
T ss_dssp TTEEEES-SCCH---HHHHHSTTEEEEE---ECC-C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGG
T ss_pred CceEEEe-eCCH---HHHHhhcCcCeEE---ecC-C-cchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCC
Confidence 4788876 7886 5788999965543 333 1 248999999999999987432 23345554 7888873
Q ss_pred --ChHHHHHHHHHhc
Q 014316 414 --SSSELADQLLVNA 426 (427)
Q Consensus 414 --~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 398 ~~~~~~l~~av~~ll 412 (454)
T 3hbf_A 398 VLTKESIKKALELTM 412 (454)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 3588888887653
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.015 Score=59.27 Aligned_cols=74 Identities=12% Similarity=0.046 Sum_probs=52.5
Q ss_pred CcEEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEeC
Q 014316 341 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~~ 413 (427)
+++...+ |+++ .++|. ++|++|. ++ =.+++.|++++|+|+|+....+ ....+.+. +.|+.+.
T Consensus 325 ~~~~v~~-w~pq---~~vL~h~~~~~fvt-----h~--G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~ 393 (456)
T 2c1x_A 325 GYGMVVP-WAPQ---AEVLAHEAVGAFVT-----HC--GWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 393 (456)
T ss_dssp TTEEEES-CCCH---HHHHTSTTEEEEEE-----CC--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred CceEEec-CCCH---HHHhcCCcCCEEEe-----cC--CcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec
Confidence 4788877 6876 36788 6677774 32 1248999999999999987432 33455566 7888873
Q ss_pred ----ChHHHHHHHHHh
Q 014316 414 ----SSSELADQLLVN 425 (427)
Q Consensus 414 ----~~~~la~~l~~~ 425 (427)
+.++++++++++
T Consensus 394 ~~~~~~~~l~~~i~~l 409 (456)
T 2c1x_A 394 GGVFTKSGLMSCFDQI 409 (456)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHH
Confidence 468888888765
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.04 Score=56.30 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=52.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~-- 413 (427)
+|+.+.+ |+++. ++|+.+++.++. +++ =.+++.|++++|+|+|+....+ ....+ ++-+.|+.+.
T Consensus 353 ~~~~v~~-~~pq~---~~L~h~~~~~~v---th~--G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~ 423 (482)
T 2pq6_A 353 DRGLIAS-WCPQD---KVLNHPSIGGFL---THC--GWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN 423 (482)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEE---ECC--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSS
T ss_pred CCEEEEe-ecCHH---HHhcCCCCCEEE---ecC--CcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCC
Confidence 4788887 68874 588776763332 332 1248999999999999997543 23334 3567788774
Q ss_pred -ChHHHHHHHHHhc
Q 014316 414 -SSSELADQLLVNA 426 (427)
Q Consensus 414 -~~~~la~~l~~~~ 426 (427)
+.++++++|.++.
T Consensus 424 ~~~~~l~~~i~~ll 437 (482)
T 2pq6_A 424 VKREELAKLINEVI 437 (482)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 5688888887753
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.11 Score=52.97 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=48.5
Q ss_pred ecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC-------
Q 014316 346 RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS------- 413 (427)
Q Consensus 346 ~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~------- 413 (427)
...|+++ .++|+.+++.++. +++ | -++++||+++|+|+|+-...+ ....+ ++-+.|+.+.
T Consensus 343 v~~w~Pq---~~vL~h~~v~~fv---tHg-G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~ 414 (480)
T 2vch_A 343 IPFWAPQ---AQVLAHPSTGGFL---THC-G-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 414 (480)
T ss_dssp EESCCCH---HHHHHSTTEEEEE---ECC-C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCC
T ss_pred EeCccCH---HHHhCCCCcCeEE---ecc-c-chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCcc
Confidence 3346876 4889999975443 333 1 248999999999999987533 23333 4566777662
Q ss_pred ChHHHHHHHHHhc
Q 014316 414 SSSELADQLLVNA 426 (427)
Q Consensus 414 ~~~~la~~l~~~~ 426 (427)
+.++++++|+++.
T Consensus 415 ~~~~l~~av~~vl 427 (480)
T 2vch_A 415 RREEVARVVKGLM 427 (480)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 3588888887753
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0021 Score=69.41 Aligned_cols=113 Identities=12% Similarity=0.036 Sum_probs=84.4
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP- 326 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~- 326 (427)
|...+++.+. ++++...++ .|=-+..+++...+.++ .|+.+|++...+.
T Consensus 514 R~~~gLp~~~-v~f~~fN~~--~Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~~ 563 (723)
T 4gyw_A 514 RSQYGLPEDA-IVYCNFNQL--YKIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPAV 563 (723)
T ss_dssp GGGGTCCTTS-EEEECCSCG--GGCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTGG
T ss_pred hhhcCCCCCC-EEEEeCCcc--ccCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcHH
Confidence 3444555543 345444444 35567788888888777 8999998877543
Q ss_pred ChHHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 327 DKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
..+.+++.+++.|++ +|.|.+. .+.++....++.+|+++=+ ...+=+.+.+||+.||+|||+-.
T Consensus 564 ~~~~l~~~~~~~gi~~~r~~f~~~-~~~~~~l~~~~~~Di~LDt----~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 564 GEPNIQQYAQNMGLPQNRIIFSPV-APKEEHVRRGQLADVCLDT----PLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GHHHHHHHHHHTTCCGGGEEEEEC-CCHHHHHHHGGGCSEEECC----SSSCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHHHHHHhcCCCcCeEEECCC-CCHHHHHHHhCCCeEEeCC----CCcCCHHHHHHHHHcCCCEEEcc
Confidence 456788888898994 7999997 8999999999999999963 22334679999999999999865
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.057 Score=58.16 Aligned_cols=220 Identities=12% Similarity=0.092 Sum_probs=117.5
Q ss_pred HhhcCCcEEEEecccchhhhhhhcCCC----chHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-C
Q 014316 123 SSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-P 196 (427)
Q Consensus 123 ~~~~~~p~i~~~h~~~~~~~~~~~~~~----~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~ 196 (427)
.+..+..+|-+||+.+.--+....... .......+.+.+ ..+..|.+++.|+.+.+.+.+.++.+ -.++..| |
T Consensus 432 ~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~P 510 (729)
T 3l7i_A 432 NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNR-ETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYP 510 (729)
T ss_dssp CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHH-HHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCG
T ss_pred ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHHH-hhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCC
Confidence 344567788899998542111111000 111111111112 23568999999999999998888875 3444445 2
Q ss_pred -CC-Cc-CCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCC-
Q 014316 197 -PE-FF-HPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDED- 272 (427)
Q Consensus 197 -~~-~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~- 272 (427)
.+ .| .+...+...++..+ ++++.++ .+|+|+-+|.+...
T Consensus 511 R~D~l~~~~~~~~~~~~~~~~------------------------------------~~~~~~k-k~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 511 RNDVLVNRANDQEYLDEIRTH------------------------------------LNLPSDK-KVIMYAPTWRDDEFV 553 (729)
T ss_dssp GGHHHHHSTTCHHHHHHHHHH------------------------------------TTCCSSC-EEEEECCCCCGGGCC
T ss_pred chHHHhcccchHHHHHHHHHH------------------------------------hCCCCCC-eEEEEeeeeeCCccc
Confidence 12 12 11122223333322 2444444 48999988876421
Q ss_pred --------HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCC-cE
Q 014316 273 --------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RV 343 (427)
Q Consensus 273 --------~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~-~V 343 (427)
...-++.+.+.. .+++.+++-..- .........+.+ .+
T Consensus 554 ~~~~~~~~~~~~~~~l~~~l-----------------------------~~~~~li~r~Hp----~~~~~~~~~~~~~~~ 600 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYKEL-----------------------------GDDYVILLRMHY----LISNALDLSGYENFA 600 (729)
T ss_dssp GGGSSCCCCTTCHHHHHHHH-----------------------------TTTEEEEECCCH----HHHTTCCCTTCTTTE
T ss_pred cccccccchhhHHHHHHHHc-----------------------------CCCeEEEEecCc----chhccccccccCCcE
Confidence 111122222211 236777775421 111111101222 34
Q ss_pred EEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc--Cc----cccc---eecCCcEEEeCC
Q 014316 344 AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY--SC----IEEL---VKVDKNGLLFSS 414 (427)
Q Consensus 344 ~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~--~g----~~e~---v~~~~~G~l~~~ 414 (427)
..... .+++.+++..||++|. . .+.+++|++..++|||-... .. .+.+ ..+..-|-++.+
T Consensus 601 ~~~~~---~~di~~ll~~aD~lIT--D------ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~ 669 (729)
T 3l7i_A 601 IDVSN---YNDVSELFLISDCLIT--D------YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTE 669 (729)
T ss_dssp EECTT---CSCHHHHHHTCSEEEE--S------SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESS
T ss_pred EeCCC---CcCHHHHHHHhCEEEe--e------chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECC
Confidence 44343 6799999999999995 2 23389999999999997731 11 1111 122345777788
Q ss_pred hHHHHHHHHH
Q 014316 415 SSELADQLLV 424 (427)
Q Consensus 415 ~~~la~~l~~ 424 (427)
.++|.++|..
T Consensus 670 ~~eL~~~i~~ 679 (729)
T 3l7i_A 670 PYGLAKELKN 679 (729)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 8999888764
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.0049 Score=56.83 Aligned_cols=73 Identities=8% Similarity=-0.007 Sum_probs=49.6
Q ss_pred cEEEecCCCCcccHHHHHh-cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--------ccceecCCcEEEe
Q 014316 342 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVKVDKNGLLF 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~-~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~--------~e~v~~~~~G~l~ 412 (427)
++...++ .+++.++|. .||++|+ +. =..++.|++++|+|.|....... .+.+.+...++++
T Consensus 115 ~v~v~~f---~~~m~~~l~~~AdlvIs-----ha--GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~ 184 (224)
T 2jzc_A 115 KVIGFDF---STKMQSIIRDYSDLVIS-----HA--GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC 184 (224)
T ss_dssp EEEECCS---SSSHHHHHHHHCSCEEE-----SS--CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE
T ss_pred eEEEeec---cchHHHHHHhcCCEEEE-----CC--cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc
Confidence 4556666 589999999 9999996 21 12489999999999999875421 2233333345544
Q ss_pred CChHHHHHHHHHh
Q 014316 413 SSSSELADQLLVN 425 (427)
Q Consensus 413 ~~~~~la~~l~~~ 425 (427)
+++.|+++|.++
T Consensus 185 -~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 -APTETGLIAGLR 196 (224)
T ss_dssp -CSCTTTHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 566666666654
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=92.43 E-value=0.17 Score=48.41 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=63.4
Q ss_pred CCCeEEEEEeecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-HHHH
Q 014316 256 NRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-~~~~ 332 (427)
+++.+++..|.-.+.|.. +.+.+.+..+.+ .++++++.+.++.+ +..+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~ 227 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAK 227 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHH
Confidence 345555666654444443 466776666642 25777777444433 3334
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+..+. ..++.+.|. .+-.++.++++.||++|.. . .|..=+ |.|.|+|+|+--
T Consensus 228 ~i~~~--~~~~~l~g~-~sl~el~ali~~a~l~I~~---D----SG~~Hl-Aaa~g~P~v~lf 279 (326)
T 2gt1_A 228 RLAEG--FAYVEVLPK-MSLEGVARVLAGAKFVVSV---D----TGLSHL-TAALDRPNITVY 279 (326)
T ss_dssp HHHTT--CTTEEECCC-CCHHHHHHHHHTCSEEEEE---S----SHHHHH-HHHTTCCEEEEE
T ss_pred HHHhh--CCcccccCC-CCHHHHHHHHHhCCEEEec---C----CcHHHH-HHHcCCCEEEEE
Confidence 44333 235777787 8899999999999999974 2 233444 778999999863
|
| >2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A | Back alignment and structure |
|---|
Probab=80.52 E-value=5.7 Score=31.81 Aligned_cols=83 Identities=18% Similarity=0.174 Sum_probs=55.9
Q ss_pred ccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeec
Q 014316 292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369 (427)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~ 369 (427)
+++.|.+.... ++|.+.........|+|.|.=+ .+++++++++.+|- .+.+. ++ +.-|++|+
T Consensus 13 ~~~~p~~~g~~--~~p~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg---~v~~s-VS--------kkTd~LV~-- 76 (109)
T 2k6g_A 13 NREGPKALGSK--EIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGG---KVTGN-VS--------KKTNYLVM-- 76 (109)
T ss_dssp TCCCCSSTTTS--CCCCCCTTTTTTCEEEEESBCSSCCHHHHHHHHHHTTC---EEESS-CC--------TTCCEEEE--
T ss_pred cccCCCCCCcc--cCCCCCCCCCCCCEEEEeeeCCCCCHHHHHHHHHHcCC---EeeCc-cc--------CCceEEEE--
Confidence 33444443332 4555655567789999999653 58999999999873 33444 33 56788886
Q ss_pred cCCCCCCCchHHHHHHcCCCcEEE
Q 014316 370 TSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 370 ~~s~~e~~p~~~lEama~G~PVIa 393 (427)
....+ +.|+-.|...|+|||.
T Consensus 77 --G~~~g-~sK~~kA~~lgI~Ii~ 97 (109)
T 2k6g_A 77 --GRDSG-QSKSDKAAALGTKIID 97 (109)
T ss_dssp --CBCCC-HHHHHHHHHHTCEEEC
T ss_pred --CCCCC-hHHHHHHHHcCCeEEe
Confidence 32211 4799999999999986
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 427 | ||||
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 0.004 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 37.1 bits (84), Expect = 0.004
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 311 QYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHT 370
+ + + FII GKG + + + V T LS E L GS D +
Sbjct: 278 KKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD---FVII 334
Query: 371 SSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLL 423
S + ++ G A + + +++ ++ G+L ELA+ +L
Sbjct: 335 PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-NETGILVKAGDPGELANAIL 388
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 427 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.98 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.98 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.97 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.86 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.83 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.73 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.08 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.78 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.77 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.64 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.41 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.37 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.33 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.52 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 97.37 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.31 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 96.29 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 96.21 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 95.53 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 93.77 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 93.65 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 90.01 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 85.04 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.98 E-value=1.5e-30 Score=260.58 Aligned_cols=337 Identities=17% Similarity=0.098 Sum_probs=214.7
Q ss_pred CCChhHH-HHHHHHHhhCCCcEEEEecCCCCCccc-----------------ccCCCceEEEEeecCCC--CCCCCcchh
Q 014316 16 GRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAA-----------------ILEHPSIHIHTMTQWPT--IPRGLPKVL 75 (427)
Q Consensus 16 ~~~~r~~-~~a~~La~~~g~~V~vi~~~~~~~~~~-----------------~~~~~~i~v~~~~~~~~--~~~~~~~~~ 75 (427)
||.++.. ..+.+|+++ ||+|+|+|+..+....+ .....+++++++..... .........
T Consensus 16 GG~~~~~~~La~~L~~~-Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (437)
T d2bisa1 16 GGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWD 94 (437)
T ss_dssp SSHHHHHHHHHHHHHHT-TCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEESSGGGCSCTTCSHHH
T ss_pred CCHHHHHHHHHHHHHHc-CCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecCccccccccccccchh
Confidence 4444443 356778886 99999999654321111 01234677777662110 011111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhh---hhcCCCchH
Q 014316 76 KPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS---LSLGRRSHF 152 (427)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~---~~~~~~~~~ 152 (427)
........+......++..+..+...||+||+|+ ..+.+++.++++..++|+|+++|+..+.... .........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~---~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~ 171 (437)
T d2bisa1 95 GLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHD---WHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL 171 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEET---GGGHHHHHHHHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECC---hhhhhHhhhhhccccCceeEEEeeccccccchhhhhhccchhh
Confidence 1111121122222233444454556799999998 4455557788888899999999998431100 000000000
Q ss_pred -HHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhh---CCeEEEecCC-CCCCcCCCC----h-HHHHHHHhhhhhcccCC
Q 014316 153 -VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPTS----L-EEKHELFCRLNKILHQP 222 (427)
Q Consensus 153 -~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~-~~~~f~~~~----~-~~~~~~~~~~~~~~~~~ 222 (427)
.......++...+.+|.++++++....+....+ ..++.+++|+ +.+.|.+.. . ..+..+..++
T Consensus 172 ~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~------- 244 (437)
T d2bisa1 172 APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKF------- 244 (437)
T ss_dssp CCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHT-------
T ss_pred hhHHHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhh-------
Confidence 000112455666789999999998887654433 3448999999 777665431 1 1111221111
Q ss_pred CCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhh
Q 014316 223 LGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEV 301 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~ 301 (427)
. ......++|+|++. +.||++.+++|+..+.+.
T Consensus 245 -----------------------------~--~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~--------------- 278 (437)
T d2bisa1 245 -----------------------------G--MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSK--------------- 278 (437)
T ss_dssp -----------------------------T--CCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTS---------------
T ss_pred -----------------------------h--ccCCceEEEeecccccchhHHHHHhhhcccccc---------------
Confidence 1 22235899999996 579999999999987532
Q ss_pred hhhhhcCCcccCCCCEEEEEEeCCCChHHHH-HHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCch
Q 014316 302 FLKEISDGKQYLYPRLLFIITGKGPDKESYE-EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPM 379 (427)
Q Consensus 302 ~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~-~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~ 379 (427)
...++++|+++|+|+...... +...+ ... .+.|.|. ++.+++..+++.||++++| |..|++|+
T Consensus 279 ----------~~~~~~~lvi~G~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~adi~v~~---s~~e~~~~ 343 (437)
T d2bisa1 279 ----------KEFQEMRFIIIGKGDPELEGWARSLEE-KHGNVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGL 343 (437)
T ss_dssp ----------GGGGGEEEEEECCBCHHHHHHHHHHHH-TCTTEEEECSC-CCHHHHHHHHTTCSEEEEC---CSCCSSCH
T ss_pred ----------cccccceeeeecccccccccchhhhcc-ccccceecccc-CcHHHHHHHHhhhcccccc---ccccccch
Confidence 025789999999997543322 22222 333 4555554 9999999999999999997 77899999
Q ss_pred HHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 380 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 380 ~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+++||||||+|||+|+.||..|++++ ++|+++ +|+++||++|.++
T Consensus 344 ~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~l 390 (437)
T d2bisa1 344 VALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKA 390 (437)
T ss_dssp HHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHH
Confidence 99999999999999999999999875 589999 5789999999775
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=1.9e-32 Score=266.27 Aligned_cols=309 Identities=13% Similarity=0.053 Sum_probs=206.1
Q ss_pred CCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 014316 13 GDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (427)
Q Consensus 13 ~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
-++||.++. ...|.+|+++ ||+|+|+|...... ...+++++.++ .. ......+. .++...
T Consensus 10 ~p~GG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~-----~~~~~~~~~~~--~~---~~~~~~~~----~~~~~~---- 70 (370)
T d2iw1a1 10 FPFGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGD-----CPKAFELIQVP--VK---SHTNHGRN----AEYYAW---- 70 (370)
T ss_dssp CTTCHHHHHHHHHHHHHHHT-TCCEEEEESEECSC-----CCTTCEEEECC--CC---CSSHHHHH----HHHHHH----
T ss_pred CCCCCHHHHHHHHHHHHHHC-CCEEEEEecCCCCC-----CCCceEEEEcC--cc---ccccchhh----HHHHHH----
Confidence 456666654 4567888886 99999999653221 12378888887 22 11111111 111111
Q ss_pred HHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhh-hhhcC---CCchHHHHHHHHHHHH--hc
Q 014316 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLL-SLSLG---RRSHFVSIYRWIEKYY--GK 165 (427)
Q Consensus 92 ~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~-~~~~~---~~~~~~~~~~~~e~~~--~~ 165 (427)
+.. ..+..++|+||.++.... .. ++..++..+... ....+ ............++.. ..
T Consensus 71 ~~~-~~~~~~~d~v~~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (370)
T d2iw1a1 71 VQN-HLKEHPADRVVGFNKMPG--------------LD-VYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQG 134 (370)
T ss_dssp HHH-HHHHSCCSEEEESSCCTT--------------CS-EEECCSCCHHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTT
T ss_pred HHH-HHHhcccceeeecccCch--------------HH-HHHHhhcccceeeeeecCccccccchhchhHHHHHHHHhhc
Confidence 011 113378999998873211 11 111111111000 00000 0111112223333332 23
Q ss_pred cCCEEEEcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCC-ChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 166 MANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
.++.+++.++...+.+.+.++.+ +.+++|| +.+.+.+. .+..+......
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~-------------------------- 188 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQK-------------------------- 188 (370)
T ss_dssp CCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHH--------------------------
T ss_pred cCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhc--------------------------
Confidence 67899999999998888777664 8899999 65544322 22222222211
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
.+.+.+. .+++++||+.+.||++.+++|++.+.++ .++..+.
T Consensus 189 ----------~~~~~~~-~~i~~~gr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~~~ 230 (370)
T d2iw1a1 189 ----------NGIKEQQ-NLLLQVGSDFGRKGVDRSIEALASLPES---------------------------LRHNTLL 230 (370)
T ss_dssp ----------TTCCTTC-EEEEEECSCTTTTTHHHHHHHHHTSCHH---------------------------HHHTEEE
T ss_pred ----------cCCCccc-eEEEEEeccccccchhhhcccccccccc---------------------------cccceee
Confidence 2333444 5899999999999999999999999876 5567777
Q ss_pred EEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 321 ITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 321 i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
++|+++..+++++++++++.. +++|+|. .+++.++|++||++|+| |..|++|++++||||||+|||+|+.||.
T Consensus 231 ii~g~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adv~v~p---s~~E~~~~~~~EAma~G~PvI~s~~~g~ 304 (370)
T d2iw1a1 231 FVVGQDKPRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLHP---AYQEAAGIVLLEAITAGLPVLTTAVCGY 304 (370)
T ss_dssp EEESSSCCHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHHTCCEEEETTSTT
T ss_pred ecccccccccccccccccccccccccccc---ccccccccccccccccc---cccccccceeeecccCCeeEEEeCCCCh
Confidence 777777778899999999985 8999997 78999999999999997 7789999999999999999999999999
Q ss_pred ccceecCCcEEEe---CChHHHHHHHHHhc
Q 014316 400 EELVKVDKNGLLF---SSSSELADQLLVNA 426 (427)
Q Consensus 400 ~e~v~~~~~G~l~---~~~~~la~~l~~~~ 426 (427)
+|++.++.+|+++ +|+++||++|.++.
T Consensus 305 ~e~i~~~~~G~l~~~~~d~~~la~~i~~ll 334 (370)
T d2iw1a1 305 AHYIADANCGTVIAEPFSQEQLNEVLRKAL 334 (370)
T ss_dssp THHHHHHTCEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHhcCCCceEEEcCCCCHHHHHHHHHHHH
Confidence 9999999999876 47899999998763
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.97 E-value=1e-30 Score=267.92 Aligned_cols=269 Identities=10% Similarity=0.013 Sum_probs=176.7
Q ss_pred CCCcEEEEcCCCChhHHHHHH--HHHhhcCCcEEEEecccchhhhh-----hhcCC-CchHH------HHHHHHHHHHhc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVK--WASSLRRSAFIVDWHNFGYTLLS-----LSLGR-RSHFV------SIYRWIEKYYGK 165 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~--~~~~~~~~p~i~~~h~~~~~~~~-----~~~~~-~~~~~------~~~~~~e~~~~~ 165 (427)
.+|||||+|+ ..+.+.+. ..++..++|+|+|.|+..+.... ..... ...+. .-....++....
T Consensus 129 ~~pDIvH~h~---~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (477)
T d1rzua_ 129 WRPDMVHAHD---WQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQ 205 (477)
T ss_dssp CCCSEEEEEH---HHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHH
T ss_pred CCCCEEEecc---hhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHH
Confidence 5899999998 33322222 23456689999999986431110 00000 00000 000123444556
Q ss_pred cCCEEEEcCHHHHHHHHHh-h-----------CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCC
Q 014316 166 MANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (427)
.+|.++++|....++.... + ..++.+|+|| +.+.|.|..... +.. ..
T Consensus 206 ~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~---------------i~~--~~--- 265 (477)
T d1rzua_ 206 TATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHL---------------IHD--NY--- 265 (477)
T ss_dssp HCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTT---------------SSS--CC---
T ss_pred hhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhcccccccc---------------ccc--cc---
Confidence 8999999999887754321 1 1238899999 777665532100 000 00
Q ss_pred CCCCCccchhh-hcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcc
Q 014316 233 MEGQKADETIF-TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 311 (427)
Q Consensus 233 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
.......... ....+....+..++..+|+|+||+.++||++.|++|+.++.+.
T Consensus 266 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~------------------------- 319 (477)
T d1rzua_ 266 -SAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL------------------------- 319 (477)
T ss_dssp -BTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT-------------------------
T ss_pred -hhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh-------------------------
Confidence 0000000000 0001111233344445899999999999999999999998764
Q ss_pred cCCCCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCc
Q 014316 312 YLYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 390 (427)
Q Consensus 312 ~~~~~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~P 390 (427)
+.+|+++|.|+.....+......++ ++|.|.+. .+.++...++++||++|+| |.+|+||++++||||||+|
T Consensus 320 ----~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~aD~~v~P---S~~E~fglv~lEAma~G~P 391 (477)
T d1rzua_ 320 ----GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIG-YNEPLSHLMQAGCDAIIIP---SRFEPCGLTQLYALRYGCI 391 (477)
T ss_dssp ----TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSCCSSCSHHHHHHHHTCE
T ss_pred ----CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcc-cChhHHHHHHHhCccccCC---ccccCCCHHHHHHHHcCCC
Confidence 6788999998755443333223333 57999887 7888899999999999998 8789999999999999999
Q ss_pred EEEeccCccccceecCC---------cEEEe--CChHHHHHHHHHh
Q 014316 391 VCAVSYSCIEELVKVDK---------NGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 391 VIas~~~g~~e~v~~~~---------~G~l~--~~~~~la~~l~~~ 425 (427)
||+|++||++|+|.+++ +|+++ .|+++||++|.++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~ 437 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRT 437 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHH
T ss_pred EEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHH
Confidence 99999999999998875 89999 6789999998754
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=1.3e-21 Score=171.99 Aligned_cols=132 Identities=21% Similarity=0.272 Sum_probs=114.8
Q ss_pred EEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH---HHHHHH
Q 014316 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES---YEEKIR 336 (427)
Q Consensus 260 ~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~---~~~~~~ 336 (427)
.++|+||+.+.||++.+++|++.+ ++.++.|+|.|++.+. +.+.+.
T Consensus 14 ~~l~iGrl~~~K~~~~~i~a~~~l-------------------------------~~~~l~ivg~~~~~~~~~~~~~~~~ 62 (166)
T d2f9fa1 14 FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHAERYARKIM 62 (166)
T ss_dssp CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTHHHHHHHHH
T ss_pred EEEEEecCccccCHHHHHHHHHHh-------------------------------cCCeEEEEEecccccchhhhhhhhc
Confidence 577999999999999999999874 5678899997765444 434444
Q ss_pred HcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-CCh
Q 014316 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSS 415 (427)
Q Consensus 337 ~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~-~~~ 415 (427)
+...++|+|+|. ++.+++.++|+.||++++| |..|++|++++|||++|+|||+|+.++..|++.++.+|+++ .|+
T Consensus 63 ~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~p---s~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~d~ 138 (166)
T d2f9fa1 63 KIAPDNVKFLGS-VSEEELIDLYSRCKGLLCT---AKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADV 138 (166)
T ss_dssp HHSCTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECSCH
T ss_pred ccccCcEEEeec-ccccccccccccccccccc---cccccccccccccccccccceeecCCcceeeecCCcccccCCCCH
Confidence 445578999996 9999999999999999997 77899999999999999999999999999999999999988 678
Q ss_pred HHHHHHHHHhc
Q 014316 416 SELADQLLVNA 426 (427)
Q Consensus 416 ~~la~~l~~~~ 426 (427)
++++++|.++.
T Consensus 139 ~~~~~~i~~l~ 149 (166)
T d2f9fa1 139 NEIIDAMKKVS 149 (166)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998763
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.83 E-value=7.5e-21 Score=171.45 Aligned_cols=136 Identities=20% Similarity=0.230 Sum_probs=109.2
Q ss_pred eEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH-H-HHHHH
Q 014316 259 ALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE-S-YEEKI 335 (427)
Q Consensus 259 ~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~-~-~~~~~ 335 (427)
..|+|+||+. ++||++.+++|++.+.+. ...++++|+++|+|+... . .+.+.
T Consensus 33 ~~il~~Grl~~~~Kg~~~li~a~~~l~~~-------------------------~~~~~~~l~i~G~g~~~~~~~~~~~~ 87 (196)
T d2bfwa1 33 VTFMFIGRFDRGQKGVDVLLKAIEILSSK-------------------------KEFQEMRFIIIGKGDPELEGWARSLE 87 (196)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTS-------------------------GGGGGEEEEEECCBCHHHHHHHHHHH
T ss_pred CEEEEEcCCCccccCHHHHHHHHHhhhcc-------------------------cCCCCeEEEEEeecccchhhhhhhhh
Confidence 3799999996 689999999999998542 125789999999986432 2 22222
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--C
Q 014316 336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--S 413 (427)
Q Consensus 336 ~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~ 413 (427)
+. ..++.+.+++++.+++..+|+.||++|+| |..|++|.+++|||+||+|||+++.|+..|++.+ .+|+++ +
T Consensus 88 ~~--~~~~~~~~~~~~~~~l~~~~~~~di~v~p---s~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~ 161 (196)
T d2bfwa1 88 EK--HGNVKVITEMLSREFVRELYGSVDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAG 161 (196)
T ss_dssp HH--CTTEEEECSCCCHHHHHHHHTTCSEEEEC---CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTT
T ss_pred hc--cceeEEeeeccccccchhccccccccccc---cccccccccchhhhhcCceeeecCCCccceeecC-CceeeECCC
Confidence 22 34444444459999999999999999997 7779999999999999999999999999998854 689999 5
Q ss_pred ChHHHHHHHHHh
Q 014316 414 SSSELADQLLVN 425 (427)
Q Consensus 414 ~~~~la~~l~~~ 425 (427)
|+++++++|.++
T Consensus 162 ~~~~l~~~i~~~ 173 (196)
T d2bfwa1 162 DPGELANAILKA 173 (196)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 789999998763
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=2.6e-17 Score=167.21 Aligned_cols=138 Identities=8% Similarity=0.047 Sum_probs=110.0
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh--H------
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK--E------ 329 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~--~------ 329 (427)
..+|+++||+.+.||++.+++|+.++.+++..- ..++.++.+|.|+.. +
T Consensus 254 ~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~-----------------------~~~v~lv~~~~~~~~~~~~~~~~~ 310 (456)
T d1uqta_ 254 VQNIFSVERLDYSKGLPERFLAYEALLEKYPQH-----------------------HGKIRYTQIAPTSRGDVQAYQDIR 310 (456)
T ss_dssp CEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGG-----------------------TTTEEEEEECCBCSTTSHHHHHHH
T ss_pred CeEEEEeCCCchhhchHHHHHHHHHHHHhCccc-----------------------cccEEEEEEcCCcccchHHHHHHH
Confidence 359999999999999999999999998871110 224778888766432 1
Q ss_pred -HHHHHHHHc-------CCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCc-----EEEec
Q 014316 330 -SYEEKIRRL-------RLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP-----VCAVS 395 (427)
Q Consensus 330 -~~~~~~~~l-------~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~P-----VIas~ 395 (427)
++.+++.++ ++. .+.+.+. ++.+++.++|+.||++++| |.+||||++++||||||+| +|+|+
T Consensus 311 ~ev~~lv~~in~~~~~~~~~~~v~~~~~-~~~~~l~a~~~~Adv~v~~---s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~ 386 (456)
T d1uqta_ 311 HQLENEAGRINGKYGQLGWTPLYYLNQH-FDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLVLSQ 386 (456)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSC-CCHHHHHHHHHHCSEEEEC---CSSBSCCHHHHHHHHHSCTTSCCEEEEET
T ss_pred HHHHHHHHHHHhhhccCCCCceeeccCC-cCHHHHhHHHhhhceeecC---CccCCCCcHHHHHHHhCCCCCCCcEEEeC
Confidence 222333322 343 4778787 9999999999999999997 8899999999999999999 99999
Q ss_pred cCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 396 YSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 396 ~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
.+|+++.+. +|+++ .|++++|++|.++
T Consensus 387 ~~G~~~~l~---~g~lVnP~d~~~~A~ai~~a 415 (456)
T d1uqta_ 387 FAGAANELT---SALIVNPYDRDEVAAALDRA 415 (456)
T ss_dssp TBGGGGTCT---TSEEECTTCHHHHHHHHHHH
T ss_pred CCCCHHHhC---CeEEECcCCHHHHHHHHHHH
Confidence 999999984 38889 5789999999764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=5.6e-09 Score=99.16 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=63.7
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
...++.+..................++...++ .+++.++++.||++|+ ..+ +.++.|++++|+|+|....
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f---~~~~~~lm~~adl~It----~~G---~~T~~Eal~~g~P~I~iP~ 276 (351)
T d1f0ka_ 207 VTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEF---IDDMAAAYAWADVVVC----RSG---ALTVSEIAAAGLPALFVPF 276 (351)
T ss_dssp EEEEEECCTTCHHHHHHHHHHTTCTTSEEESC---CSCHHHHHHHCSEEEE----CCC---HHHHHHHHHHTCCEEECCC
T ss_pred ceeeeeccccchhhhhhhhcccccccceeeee---hhhHHHHHHhCchhhc----ccc---chHHHHHHHhCCceeeeec
Confidence 44455554444333332322322346777788 7889999999999996 211 2589999999999998753
Q ss_pred C---c----cccceecCCcEEEeC----ChHHHHHHHHH
Q 014316 397 S---C----IEELVKVDKNGLLFS----SSSELADQLLV 424 (427)
Q Consensus 397 ~---g----~~e~v~~~~~G~l~~----~~~~la~~l~~ 424 (427)
+ + ..+.+.+.+.|+.++ +.+.+.+.|.+
T Consensus 277 ~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~ 315 (351)
T d1f0ka_ 277 QHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAG 315 (351)
T ss_dssp CCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHT
T ss_pred ccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHh
Confidence 2 2 245666777888773 35677777654
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.78 E-value=6.3e-08 Score=94.48 Aligned_cols=236 Identities=16% Similarity=0.050 Sum_probs=143.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+|+++.-+ ...+.+.+++...++|+ +++|+-..+ ..-..++ .-....+.+.+.||..+|.++..+
T Consensus 86 ~~kPD~vlv~GDr--~e~la~a~aa~~~~ipi-~HiegG~rs-----g~~~~~~--~de~~R~~iskls~~hf~~t~~~~ 155 (373)
T d1v4va_ 86 EMGADYVLVHGDT--LTTFAVAWAAFLEGIPV-GHVEAGLRS-----GNLKEPF--PEEANRRLTDVLTDLDFAPTPLAK 155 (373)
T ss_dssp HTTCSEEEEESSC--HHHHHHHHHHHHTTCCE-EEETCCCCC-----SCTTSST--THHHHHHHHHHHCSEEEESSHHHH
T ss_pred hcCcccccccccC--ccchhHHHHHHHhhhhh-eeecccccc-----cccccCc--chhhhhhhhccccceeeecchhhh
Confidence 4899999999733 33344677888889995 456652110 0000111 012223356678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.++-|.-.+.+ .....+. . ......
T Consensus 156 ~~L~~~-Ge~~~~I~~vG~p~~D~i---------~~~~~~~-------------------------------~-~~~~~~ 193 (373)
T d1v4va_ 156 ANLLKE-GKREEGILVTGQTGVDAV---------LLAAKLG-------------------------------R-LPEGLP 193 (373)
T ss_dssp HHHHTT-TCCGGGEEECCCHHHHHH---------HHHHHHC-------------------------------C-CCTTCC
T ss_pred hhhhhh-cccccceeecccchhhHH---------Hhhhhhc-------------------------------c-cccccc
Confidence 999775 543 343332200000 0000000 0 001223
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
..+.++++.-+-...+....+++++..+.+. ..++.+++..... .......
T Consensus 194 ~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~p~~~~--~~~~~~~ 244 (373)
T d1v4va_ 194 EGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLN--PVVREAV 244 (373)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSC--HHHHHHH
T ss_pred cccceeEEeccccccchHHHHHHHHHHHhhh---------------------------cccceeeeeeccc--ccchhhh
Confidence 3455666666666666677788888887765 5666666554322 2222222
Q ss_pred -HHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCcEEEe
Q 014316 336 -RRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLLF 412 (427)
Q Consensus 336 -~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~G~l~ 412 (427)
+.+ ..+++.+... ++..++-.+++.|++++- .| +..+.||.++|+|+|.-. .|.-.|-++.|.+ +++
T Consensus 245 ~~~~~~~~n~~~~~~-l~~~~~l~ll~~s~~vig---nS-----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv 314 (373)
T d1v4va_ 245 FPVLKGVRNFVLLDP-LEYGSMAALMRASLLLVT---DS-----GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLA 314 (373)
T ss_dssp HHHHTTCTTEEEECC-CCHHHHHHHHHTEEEEEE---SC-----HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EEC
T ss_pred hhhhcccccceeecc-chHHHHHHHhhhceeEec---cc-----chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEc
Confidence 223 3358999998 999999999999999884 23 336889999999999984 6777777666655 455
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
.|.+++.+++..+
T Consensus 315 ~~d~~~I~~~i~~~ 328 (373)
T d1v4va_ 315 GTDPEGVYRVVKGL 328 (373)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 6778887777654
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.77 E-value=2.3e-08 Score=95.82 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=56.6
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--------cccceecCCcEEEe
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g--------~~e~v~~~~~G~l~ 412 (427)
+||.+.+. ++. ..++..+|++|.. + =.+++.|||++|+|+|.....+ ..+.+.+.+.|+.+
T Consensus 270 ~~v~i~~~-~p~---~~ll~~a~~~v~h-----g--G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l 338 (391)
T d1pn3a_ 270 ADCFVVGE-VNL---QELFGRVAAAIHH-----D--SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAV 338 (391)
T ss_dssp TTCCEESS-CCH---HHHHTTSSCEEEE-----S--CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEE
T ss_pred CCEEEecc-cCH---HHHHhhccEEEec-----C--chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEc
Confidence 57999885 764 6678999999962 1 2358999999999999987544 24566677789888
Q ss_pred --C--ChHHHHHHHHHh
Q 014316 413 --S--SSSELADQLLVN 425 (427)
Q Consensus 413 --~--~~~~la~~l~~~ 425 (427)
+ ++++|+++|.++
T Consensus 339 ~~~~~~~~~l~~~i~~~ 355 (391)
T d1pn3a_ 339 DGPVPTIDSLSAALDTA 355 (391)
T ss_dssp CCSSCCHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHH
Confidence 2 368999999875
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.64 E-value=1.8e-06 Score=82.37 Aligned_cols=74 Identities=11% Similarity=0.017 Sum_probs=57.9
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEe--C-
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLF--S- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~--~- 413 (427)
+||.+.+. ++. .+++..+|++|. ++ -.+++.||+++|+|+|+....+ ..+.+++.+.|+.+ .
T Consensus 286 ~~v~~~~~-~p~---~~ll~~~~~~I~-----hg--G~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~ 354 (401)
T d1rrva_ 286 DDCFAIDE-VNF---QALFRRVAAVIH-----HG--SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT 354 (401)
T ss_dssp TTEEEESS-CCH---HHHGGGSSEEEE-----CC--CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC
T ss_pred CCEEEEec-cCc---HHHhhhccEEEe-----cC--CchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCC
Confidence 58999884 764 667889999995 22 4468999999999999987655 45567677789888 2
Q ss_pred -ChHHHHHHHHHh
Q 014316 414 -SSSELADQLLVN 425 (427)
Q Consensus 414 -~~~~la~~l~~~ 425 (427)
++++|+++|+++
T Consensus 355 ~~~~~L~~ai~~v 367 (401)
T d1rrva_ 355 PTFESLSAALTTV 367 (401)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 468899999876
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.41 E-value=1.6e-05 Score=77.00 Aligned_cols=238 Identities=13% Similarity=0.048 Sum_probs=126.4
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+|+++.- ....+.+.+++...++|+ +++|+-..+ .+...++ .-....+.+.+.||..+|.++..+
T Consensus 86 ~~kpD~v~v~GD--r~e~la~a~aa~~~~Ipi-~HiegG~~s-----~~~~~~~--~de~~R~~iskls~~hf~~t~~~~ 155 (377)
T d1o6ca_ 86 DIKPDIVLVHGD--TTTTFAGSLAAFYHQIAV-GHVEAGLRT-----GNKYSPF--PEELNRQMTGAIADLHFAPTGQAK 155 (377)
T ss_dssp HHCCSEEEEETT--CHHHHHHHHHHHHTTCEE-EEESCCCCC-----SCTTTTT--THHHHHHHHHHHCSEEEESSHHHH
T ss_pred hcccceeEeeec--ccccchhhhhhhhccceE-EEEeccccc-----ccccccC--chhhhccccccceeEEeecchhhh
Confidence 379999999973 333444778888899995 456653111 0000011 012223456678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.++-|.-.+.+ .. .... . . .........
T Consensus 156 ~~L~~~-G~~~~~I~~vG~~~~D~i--------~~---~~~~-------------------~-~-------~~~~~~~~~ 196 (377)
T d1o6ca_ 156 DNLLKE-NKKADSIFVTGNTAIDAL--------NT---TVRD-------------------G-Y-------SHPVLDQVG 196 (377)
T ss_dssp HHHHHT-TCCGGGEEECCCHHHHHH--------HH---HCCS-------------------S-C-------CCSTTTTTT
T ss_pred hhhhhh-ccccceEeeccchhHHHH--------HH---HHHH-------------------H-H-------hhhhhhhcc
Confidence 999875 443 444433210100 00 0000 0 0 000011112
Q ss_pred CCCeEEEEEeecCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 256 NRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
..+.+++..-+-+.. +.....+.++..+... .++..+++...... .....
T Consensus 197 ~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~~~~~~~--~~~~~ 247 (377)
T d1o6ca_ 197 EDKMILLTAHRRENLGEPMENMFKAIRRIVGE---------------------------FEDVQVVYPVHLNP--VVREA 247 (377)
T ss_dssp TSEEEEECC----------HHHHHHHHHHHHH---------------------------CTTEEEEEC----C--HHHHH
T ss_pred CCceEEEEeccccccccchHHHHHHHHhhccc---------------------------cccccccccccccc--ccchh
Confidence 233344444433322 2234455555554443 45666655543322 23333
Q ss_pred HHH-cC-CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-CccccceecCCcEEE
Q 014316 335 IRR-LR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKVDKNGLL 411 (427)
Q Consensus 335 ~~~-l~-l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-~g~~e~v~~~~~G~l 411 (427)
..+ +. .+++.+... ++..++-.+++.|++++- .|.+ .+.||-..|+|+|.-.. +.-.+.++.|.+ ++
T Consensus 248 ~~~~~~~~~ni~~~~~-l~~~~fl~llk~s~~vIg---nSss-----~i~Ea~~lg~P~Inir~~tERqe~~~~g~n-il 317 (377)
T d1o6ca_ 248 AHKHFGDSDRVHLIEP-LEVIDFHNFAAKSHFILT---DSGG-----VQEEAPSLGKPVLVLRDTTERPEGVEAGTL-KL 317 (377)
T ss_dssp HHHC--CCSSEEECCC-CCHHHHHHHHHHCSEEEE---C--C-----HHHHGGGGTCCEEEECSCCC---CTTTTSS-EE
T ss_pred hhhccccccceEeccc-cchHHHHHHHhhhheeec---ccch-----hHHhhhhhhceEEEeCCCCcCcchhhcCee-EE
Confidence 333 22 258999997 999999999999999883 3333 68999999999998854 445566655544 55
Q ss_pred e-CChHHHHHHHHH
Q 014316 412 F-SSSSELADQLLV 424 (427)
Q Consensus 412 ~-~~~~~la~~l~~ 424 (427)
+ .+.+++.+++..
T Consensus 318 v~~~~~~I~~~i~~ 331 (377)
T d1o6ca_ 318 AGTDEENIYQLAKQ 331 (377)
T ss_dssp ECSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 6 566777666654
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.37 E-value=4.8e-06 Score=79.01 Aligned_cols=75 Identities=11% Similarity=-0.007 Sum_probs=57.2
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEe--C-
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLF--S- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~--~- 413 (427)
+||.+.+. ++. .++|..+|++|+ + +-.+++.|++++|+|+|.....+ ..+.+.+.+.|+.+ +
T Consensus 285 ~nv~~~~~-~p~---~~~l~~~~~~V~-----h--gG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~ 353 (401)
T d1iira_ 285 ADCFAIGE-VNH---QVLFGRVAAVIH-----H--GGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (401)
T ss_dssp GGEEECSS-CCH---HHHGGGSSEEEE-----C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred CCEEEEec-cCH---HHHHhhcCEEEe-----c--CCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCC
Confidence 48999885 654 677899999995 2 25568999999999999976444 44556677788887 2
Q ss_pred -ChHHHHHHHHHhc
Q 014316 414 -SSSELADQLLVNA 426 (427)
Q Consensus 414 -~~~~la~~l~~~~ 426 (427)
++++|+++|.++.
T Consensus 354 ~~~~~l~~ai~~~l 367 (401)
T d1iira_ 354 PTFDSLSAALATAL 367 (401)
T ss_dssp CCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHh
Confidence 4799999998763
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=3.7e-05 Score=74.43 Aligned_cols=242 Identities=16% Similarity=0.103 Sum_probs=138.4
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+|+++.- ....+.+.+++...++| |+++|+-..+ .+-..++ .-....+.+.+.||..+|.++..+
T Consensus 84 ~~kPD~v~v~GD--r~e~la~a~aa~~~~ip-i~HiegG~~s-----~~~~~~~--pde~~R~~iskls~~hf~~~~~~~ 153 (376)
T d1f6da_ 84 EFKPDVVLVHGD--TTTTLATSLAAFYQRIP-VGHVEAGLRT-----GDLYSPW--PEEANRTLTGHLAMYHFSPTETSR 153 (376)
T ss_dssp HHCCSEEEEETT--CHHHHHHHHHHHTTTCC-EEEESCCCCC-----SCTTSST--THHHHHHHHHHTCSEEEESSHHHH
T ss_pred hccCcceeeecc--ccchhhHHHHHHhhCce-EEEEeccccc-----ccccccC--chhhhhhhhccceeEEEeccHHHH
Confidence 379999999973 33444477788889999 5567753110 0100000 012233456678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcC------CCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFH------PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
+.+.+. |.+ +.++-|...+.+. ........+....
T Consensus 154 ~~L~~~-G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~----------------------------------- 197 (376)
T d1f6da_ 154 QNLLRE-NVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAAN----------------------------------- 197 (376)
T ss_dssp HHHHHT-TCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTT-----------------------------------
T ss_pred hHHHhc-CCCccccceecCchHHHHHHHHhhhhccchhhhhhhcc-----------------------------------
Confidence 999875 443 5555443111110 0000000110000
Q ss_pred ccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 250 DVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
......+.+.+++..=+.+ ..+.+..+++++..+.+. ..++.+++.-...
T Consensus 198 ~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~---------------------------~~~~~ii~p~~~~-- 248 (376)
T d1f6da_ 198 YPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLN-- 248 (376)
T ss_dssp CTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBC--
T ss_pred ccccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhh---------------------------cceeEEecccccc--
Confidence 0122333444444433322 344567777777777665 5567666655322
Q ss_pred HHHHHHH-HHcC-CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-Cccccceec
Q 014316 329 ESYEEKI-RRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKV 405 (427)
Q Consensus 329 ~~~~~~~-~~l~-l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-~g~~e~v~~ 405 (427)
....... +.+. .+++.+... ++..++..+++.|++++- .|++ .+.||-..|+|+|.-.. ..-++-+..
T Consensus 249 ~~~~~~~~~~~~~~~ni~~~~~-l~~~~fl~ll~~a~~vig---nSss-----gi~Ea~~lg~P~Inir~~ter~~~~~~ 319 (376)
T d1f6da_ 249 PNVREPVNRILGHVKNVILIDP-QEYLPFVWLMNHAWLILT---DSGG-----IQEEAPSLGKPVLVMRDTTERPEAVTA 319 (376)
T ss_dssp HHHHHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHCSEEEE---SSSG-----GGGTGGGGTCCEEECSSCCSCHHHHHH
T ss_pred hhhhhhHhhhhcccccceeecc-ccHHHHHHHHhhceEEEe---cCcc-----hHhhHHHhCCCEEEcCCCccCccceec
Confidence 2222222 2233 368999998 899999999999999984 2333 57899999999996532 234455544
Q ss_pred CCcEEEe-CChHHHHHHHHHh
Q 014316 406 DKNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 406 ~~~G~l~-~~~~~la~~l~~~ 425 (427)
+ +-+++ .+.+++.+++.+.
T Consensus 320 g-~~i~v~~~~~~I~~ai~~~ 339 (376)
T d1f6da_ 320 G-TVRLVGTDKQRIVEEVTRL 339 (376)
T ss_dssp T-SEEECCSSHHHHHHHHHHH
T ss_pred C-eeEECCCCHHHHHHHHHHH
Confidence 4 44556 5677777776643
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.52 E-value=0.023 Score=53.76 Aligned_cols=77 Identities=13% Similarity=0.032 Sum_probs=51.3
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccc-eecCCcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~-v~~~~~G~l~~-- 413 (427)
+|+.+.. |.+..++. .+..+|++|. ++ |. +++.||+.+|+|+|+....+ ...- ++..+.|+-..
T Consensus 330 ~n~~v~~-~~pq~~~l-~~p~~~~fIt-----HG-G~-gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~ 400 (461)
T d2acva1 330 GKGMICG-WAPQVEVL-AHKAIGGFVS-----HC-GW-NSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 400 (461)
T ss_dssp CSEEEES-SCCHHHHH-HSTTEEEEEE-----CC-CH-HHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSS
T ss_pred CCeEEEe-cCCHHHHH-hcccCCEEEe-----cC-Cc-cHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecc
Confidence 3666655 45554443 4688899984 33 12 38999999999999987432 2333 45567788762
Q ss_pred --------ChHHHHHHHHHhc
Q 014316 414 --------SSSELADQLLVNA 426 (427)
Q Consensus 414 --------~~~~la~~l~~~~ 426 (427)
+.+++++++.++.
T Consensus 401 ~~~~~~~~t~~~l~~a~~~vl 421 (461)
T d2acva1 401 YRKGSDVVAAEEIEKGLKDLM 421 (461)
T ss_dssp CCTTCCCCCHHHHHHHHHHHT
T ss_pred ccccCCccCHHHHHHHHHHHh
Confidence 4588999988753
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=0.00092 Score=62.39 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=70.4
Q ss_pred cCCCCCeEEEEEe-ecCCCC--CHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH
Q 014316 253 LKPNRPALVVSST-SWTPDE--DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (427)
Q Consensus 253 ~~~~~~~~i~~~g-~~~~~K--~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~ 329 (427)
...+++.+++..| +..+.| ..+..++.+..+.++ +..++++|.+.+.+
T Consensus 176 ~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~-----------------------------~~~ivl~g~~~e~~ 226 (348)
T d1pswa_ 176 LSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-----------------------------GYQVVLFGSAKDHE 226 (348)
T ss_dssp CCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-----------------------------TCEEEECCCGGGHH
T ss_pred cccCCCeEEeccccchhhccccchHHHhhhHHHHhhc-----------------------------CCccccccccchHH
Confidence 3445555555554 443334 456677777777653 46788888666555
Q ss_pred HHHHHHHHcCC---Cc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 330 SYEEKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 330 ~~~~~~~~l~l---~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
..+++.+.+.. .. +.+.|. .+-.++..+++.||++|.+ ..+ .+=-|.|+|+|+|+--
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~g~-~sl~el~~li~~a~l~I~~---Dtg-----~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 227 AGNEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVTN---DSG-----LMHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhhhcccccccccccCC-ccHHHHHHHHhcceeEeec---Ccc-----HHHHHHHcCCCEEEEE
Confidence 55554443322 23 556666 7899999999999999985 333 5788999999999874
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.31 E-value=0.026 Score=53.50 Aligned_cols=74 Identities=12% Similarity=0.074 Sum_probs=50.7
Q ss_pred CcEEEecCCCCcccHHHHH--hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceec-CCcEEEeC
Q 014316 341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKV-DKNGLLFS 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~-~~~G~l~~ 413 (427)
+|+.+.. |+++. +++ ..++++|. ++ |. ..+.||+.+|+|+|+....+ ...-+.+ .+.|+-++
T Consensus 319 ~nv~~~~-~~pq~---~lL~hp~~~~fIt-----HG-G~-~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 387 (450)
T d2c1xa1 319 GYGMVVP-WAPQA---EVLAHEAVGAFVT-----HC-GW-NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 387 (450)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEEE-----CC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred ccccccc-cCChH---hhhccCceeEEEc-----cC-Cc-cHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec
Confidence 4787766 47774 455 56777773 33 12 38999999999999998543 2233444 58888873
Q ss_pred ----ChHHHHHHHHHh
Q 014316 414 ----SSSELADQLLVN 425 (427)
Q Consensus 414 ----~~~~la~~l~~~ 425 (427)
+.+++.++|.++
T Consensus 388 ~~~~t~~~l~~ai~~v 403 (450)
T d2c1xa1 388 GGVFTKSGLMSCFDQI 403 (450)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHH
Confidence 468888888765
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=96.29 E-value=0.45 Score=44.33 Aligned_cols=74 Identities=14% Similarity=0.131 Sum_probs=51.5
Q ss_pred CcEEEecCCCCcccHHHHH--hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-c---cccce-ecCCcEEEeC
Q 014316 341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-C---IEELV-KVDKNGLLFS 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g---~~e~v-~~~~~G~l~~ 413 (427)
+||.+.. |+++. ++| ..++++| +++ |. +.+.||+.+|+|+|..... + ...-+ +..+.|+.++
T Consensus 346 ~Nv~~~~-~~Pq~---~lL~hp~~~~fI-----tHG-G~-~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 346 DRGLIAS-WCPQD---KVLNHPSIGGFL-----THC-GW-NSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEE-----ECC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred CceEEee-eCCHH---HHhcCCcCcEEE-----ecC-Cc-cHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 5898876 58874 456 5677777 333 12 3899999999999999743 2 22234 3447788874
Q ss_pred ---ChHHHHHHHHHh
Q 014316 414 ---SSSELADQLLVN 425 (427)
Q Consensus 414 ---~~~~la~~l~~~ 425 (427)
+.++++++|.++
T Consensus 415 ~~~t~~~l~~ai~~v 429 (473)
T d2pq6a1 415 TNVKREELAKLINEV 429 (473)
T ss_dssp SSCCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH
Confidence 568999998775
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=96.21 E-value=0.024 Score=58.83 Aligned_cols=140 Identities=13% Similarity=0.099 Sum_probs=97.6
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESY 331 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~ 331 (427)
+.++ .+.++++-|+...|....++.-...+.+.. .+.+......+.|+++|+- |....-
T Consensus 522 ldp~-~LtigfaRRfa~YKR~~L~~~~i~~l~~~l-------------------~~~~~~~~~Pvq~IfaGKAhP~d~~g 581 (796)
T d1l5wa_ 522 INPQ-AIFDIQIKRLHEYKRQHLNLLHILALYKEI-------------------RENPQADRVPRVFLFGAKAAPGYYLA 581 (796)
T ss_dssp CCTT-SEEEEEESCCCGGGTHHHHHHHHHHHHHHH-------------------HTCTTCCCCCEEEEEECCCCTTCHHH
T ss_pred cChh-hccchhhhhhhhhhcccchhhhHHHHHHHH-------------------hcCcccCCCceEEEEcCCCCCchHHH
Confidence 3444 468999999999999988555444433321 1111111224889999974 433333
Q ss_pred HHHHHH---c--------CCC---cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 332 EEKIRR---L--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 332 ~~~~~~---l--------~l~---~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
++.++. + .+. +|.|+.- .+.+-...+++++|+-+..++ ...|..|..=.=||..|.+.++|..|
T Consensus 582 K~iIk~I~~va~~in~dp~~~~~~kVVFlen-Ydv~lA~~lv~g~DVwln~p~-~p~EASGTSgMKaalNG~lnlstlDG 659 (796)
T d1l5wa_ 582 KNIIFAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQIST-AGKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp HHHHHHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEECCC-TTTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHHHHHHHHHHHhcCChhhccceeEEEeCC-CchHHHHHHhcccchhhhCCC-CCcccCCchHHHHHHcCCeeeecccc
Confidence 333321 1 111 5999887 777888899999999997411 23399999999999999999999999
Q ss_pred ccccceec--CCcEEEeCC
Q 014316 398 CIEELVKV--DKNGLLFSS 414 (427)
Q Consensus 398 g~~e~v~~--~~~G~l~~~ 414 (427)
...|+.++ ++||++++.
T Consensus 660 w~vE~~~~vg~eN~f~fG~ 678 (796)
T d1l5wa_ 660 ANVEIAEKVGEENIFIFGH 678 (796)
T ss_dssp THHHHHHHHCGGGSEECSC
T ss_pred hHHHHHHhcCccceEEecC
Confidence 99898865 889999953
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.53 E-value=0.064 Score=55.61 Aligned_cols=136 Identities=14% Similarity=0.094 Sum_probs=95.2
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHH-HH---HhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CC
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLE-AA---LMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PD 327 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~-a~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~ 327 (427)
+.++ .+.++++-|+...|.....+. .+ ..+++. .......+.|++.|+- |.
T Consensus 546 ldp~-~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~-----------------------~~~~~~P~q~IFaGKAhP~ 601 (824)
T d2gj4a1 546 INPN-SLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKE-----------------------PNKFVVPRTVMIGGKAAPG 601 (824)
T ss_dssp CCTT-SEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHC-----------------------TTSCCCCEEEEEECCCCTT
T ss_pred CCcc-hhhhhheeechhhhhhhhhHhhHHHHHHHhhhc-----------------------ccCCCCCeEEEEeCCCCCc
Confidence 3444 468999999999999877333 22 333321 1112234889999974 44
Q ss_pred hHHHHHHHHH---c----C----C--C-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 328 KESYEEKIRR---L----R----L--K-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 328 ~~~~~~~~~~---l----~----l--~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
...-++.++. + + + . +|.|+.- .+.+-...++.++|+....++ ...|..|..=.=+|..|.+.++
T Consensus 602 d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlen-Y~v~lA~~li~g~Dvwln~p~-~~~EASGTSgMK~alNGal~ls 679 (824)
T d2gj4a1 602 YHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQIST-AGTEASGTGNMKFMLNGALTIG 679 (824)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEECCC-TTSCSCCSHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCC-CchHHHHHhhhhhhhhhcCCC-CCcccCCcchhHHHHcCCeeec
Confidence 4444444431 1 1 1 1 5999887 788888999999999997411 2238888888889999999999
Q ss_pred eccCccccceec--CCcEEEeCC
Q 014316 394 VSYSCIEELVKV--DKNGLLFSS 414 (427)
Q Consensus 394 s~~~g~~e~v~~--~~~G~l~~~ 414 (427)
|-.|...|+.++ ++||++++.
T Consensus 680 tlDGwnvEi~~~vg~~N~~~fG~ 702 (824)
T d2gj4a1 680 TMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp CSCTTHHHHHHHHCGGGSEECSC
T ss_pred cccchHHHHHHhcCcccEEEeCC
Confidence 999998888765 789999953
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.77 E-value=2.5 Score=38.83 Aligned_cols=74 Identities=14% Similarity=0.088 Sum_probs=50.2
Q ss_pred CcEEEecCCCCcccHHHHH--hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-c---cccce-ecCCcEEEe-
Q 014316 341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-C---IEELV-KVDKNGLLF- 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g---~~e~v-~~~~~G~l~- 412 (427)
+||.+.+ |+|+.+ +| ..++++| +++ |. +.+.||+.+|+|+|+...- + ....+ +.-+.|+..
T Consensus 334 ~nv~~~~-w~Pq~~---lL~hp~~~~fV-----tHG-G~-gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~ 402 (471)
T d2vcha1 334 RGFVIPF-WAPQAQ---VLAHPSTGGFL-----THC-GW-NSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPR 402 (471)
T ss_dssp TEEEEES-CCCHHH---HHHSTTEEEEE-----ECC-CH-HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCC
T ss_pred CCeeecc-cCCHHH---HhcCccCCEEE-----ecC-Cc-cHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEe
Confidence 5788877 688854 55 5677777 333 22 3899999999999998743 2 23333 334667755
Q ss_pred --C----ChHHHHHHHHHh
Q 014316 413 --S----SSSELADQLLVN 425 (427)
Q Consensus 413 --~----~~~~la~~l~~~ 425 (427)
+ +.++++++|.++
T Consensus 403 ~~~~~~~t~~~l~~ai~~v 421 (471)
T d2vcha1 403 AGDDGLVRREEVARVVKGL 421 (471)
T ss_dssp CCTTSCCCHHHHHHHHHHH
T ss_pred cCCCCcCCHHHHHHHHHHH
Confidence 2 458899988875
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=90.01 E-value=0.26 Score=36.97 Aligned_cols=91 Identities=15% Similarity=0.113 Sum_probs=55.1
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
|.+.++++++-.++. +|.-.|+-|.++ ||+|+---...+. ..+.....|++++.-. .. .
T Consensus 5 ~~~~~~ihfiGigG~----GMs~LA~~L~~~-G~~VsGSD~~~~~-~~~~L~~~Gi~v~~g~--~~--~----------- 63 (96)
T d1p3da1 5 MRRVQQIHFIGIGGA----GMSGIAEILLNE-GYQISGSDIADGV-VTQRLAQAGAKIYIGH--AE--E----------- 63 (96)
T ss_dssp CTTCCEEEEETTTST----THHHHHHHHHHH-TCEEEEEESCCSH-HHHHHHHTTCEEEESC--CG--G-----------
T ss_pred chhCCEEEEEEECHH----HHHHHHHHHHhC-CCEEEEEeCCCCh-hhhHHHHCCCeEEECC--cc--c-----------
Confidence 566778777655544 677788999997 9999876543332 3333445688765433 10 0
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEE
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFI 131 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i 131 (427)
...++|+|+..+ .++..-.....++.+|+|++
T Consensus 64 -----------------~i~~~d~vV~S~--AI~~~npel~~A~~~gipii 95 (96)
T d1p3da1 64 -----------------HIEGASVVVVSS--AIKDDNPELVTSKQKRIPVI 95 (96)
T ss_dssp -----------------GGTTCSEEEECT--TSCTTCHHHHHHHHTTCCEE
T ss_pred -----------------cCCCCCEEEECC--CcCCCCHHHHHHHHcCCCEE
Confidence 115789887665 23222223455777899975
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=85.04 E-value=4.4 Score=32.56 Aligned_cols=107 Identities=10% Similarity=0.041 Sum_probs=61.9
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecC---------------CCCcccHHHHHhcCcEEEeeccCCCCCCCc
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM---------------WLSAEDYPLLLGSADLGVCLHTSSSGLDLP 378 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~---------------~~~~~~~~~~l~~adi~v~p~~~s~~e~~p 378 (427)
..+-++.|+|.|......-+.....|.+++.+.+. +.+.+++.+.+.++|+.+.. +++...-+.
T Consensus 22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~a-tss~~~ii~ 100 (159)
T d1gpja2 22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSA-TAAPHPVIH 100 (159)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEEC-CSSSSCCBC
T ss_pred cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEe-cCCCCcccc
Confidence 45678899998865444444444445555554432 24567889999999999984 333323344
Q ss_pred hHHHHHHc----CCCcEEEeccCcccc---ceecCCcEEEeCChHHHHHHH
Q 014316 379 MKVVDMFG----CGLPVCAVSYSCIEE---LVKVDKNGLLFSSSSELADQL 422 (427)
Q Consensus 379 ~~~lEama----~G~PVIas~~~g~~e---~v~~~~~G~l~~~~~~la~~l 422 (427)
-..++... .+.|.+.-|.+-.++ -+.+- .|+.+-|.++|.+..
T Consensus 101 ~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~~-~~v~l~~ld~l~~~~ 150 (159)
T d1gpja2 101 VDDVREALRKRDRRSPILIIDIANPRDVEEGVENI-EDVEVRTIDDLRVIA 150 (159)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGS-TTEEEEEHHHHHHHH
T ss_pred HhhhHHHHHhcccCCCeEEEeecCCCCcChhhhcc-CCeEEEeHHHHHHHH
Confidence 45555443 578988888764333 23222 344443444444433
|