Citrus Sinensis ID: 014430

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420----
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPDKKEK
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccEEEEEcccccccccEEEEcccccEEEEEEEcHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHcccccccHHHHHHHHccHHHHcc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccEEEEEEcccccccccEEEEccccccEEEEEHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHccccHHHHHHHHHHHHHHccc
MVFPYMEAVVGFMILMYFFETYLDLRQHAAlklpklpktlegviSQEKfeksrgysldkshfHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQltdlpfslYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLiaplfnkftplpegeLREKIEKLASSlkfplkklfvvdgstrsshsnaymygffknkRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTdlfrsfgfdtqpvLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENlsamntdpwysayhyshpplverlaaidepdkkek
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLaaidepdkkek
MVFPYMEAVVGFMILMYFFETYLDLRQHaalklpklpkTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPDKKEK
**FPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERL***********
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAI*E******
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPDKKEK
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPD****
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPDKKEK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query424 2.2.26 [Sep-21-2011]
Q8RX88424 CAAX prenyl protease 1 ho yes no 0.995 0.995 0.872 0.0
Q6EPN8425 CAAX prenyl protease 1 ho yes no 1.0 0.997 0.808 0.0
Q80W54475 CAAX prenyl protease 1 ho yes no 0.962 0.858 0.458 1e-101
O75844475 CAAX prenyl protease 1 ho yes no 0.962 0.858 0.461 1e-100
P47154453 CAAX prenyl protease 1 OS yes no 0.990 0.927 0.413 3e-84
Q10071474 Probable CAAX prenyl prot yes no 0.966 0.864 0.399 3e-80
Q54FH7426 CAAX prenyl protease 1 ho yes no 0.950 0.946 0.398 1e-76
P40769426 Uncharacterized metallopr yes no 0.726 0.723 0.262 9e-18
A4G729293 Protease HtpX homolog OS= no no 0.433 0.627 0.295 2e-09
A6SXH1290 Protease HtpX homolog OS= no no 0.436 0.637 0.300 2e-09
>sp|Q8RX88|FACE1_ARATH CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 Back     alignment and function desciption
 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/422 (87%), Positives = 388/422 (91%)

Query: 1   MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
           M  P+ME VVGFMI+MY FETYLDLRQ  ALKLP LPKTL GVISQEKFEKSR YSLDKS
Sbjct: 1   MAIPFMETVVGFMIVMYIFETYLDLRQLTALKLPTLPKTLVGVISQEKFEKSRAYSLDKS 60

Query: 61  HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
           +FHFVHEFVTILMDSAIL F ILPWFWK SG  L  +GLD ENEILHTLSFLAGVM WSQ
Sbjct: 61  YFHFVHEFVTILMDSAILFFGILPWFWKMSGAVLPRLGLDPENEILHTLSFLAGVMTWSQ 120

Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
           +TDLPFSLYSTFVIE+RHGFNKQTIW+F RDMIKG  L+++LGPPIV+AII IVQKGGPY
Sbjct: 121 ITDLPFSLYSTFVIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPY 180

Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
           LAIYLWAFMF+LSLVMMT+YPVLIAPLFNKFTPLP+G+LREKIEKLASSLKFPLKKLFVV
Sbjct: 181 LAIYLWAFMFILSLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVV 240

Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
           DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKN++EIVAVIAHELGHWKLNHT YSFIA
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNEDEIVAVIAHELGHWKLNHTTYSFIA 300

Query: 301 VQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRS 360
           VQ+L  LQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIP+QHLVSFGLNLVSR+
Sbjct: 301 VQILAFLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPLQHLVSFGLNLVSRA 360

Query: 361 FEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPD 420
           FEFQADAFA KLGYA  LR  LVKLQEENLSAMNTDP YSAYHYSHPPLVERL AID  D
Sbjct: 361 FEFQADAFAVKLGYAKDLRPALVKLQEENLSAMNTDPLYSAYHYSHPPLVERLRAIDGED 420

Query: 421 KK 422
           KK
Sbjct: 421 KK 422
Proteolytically removes the C-terminal three residues of farnesylated proteins. The substrate specificity is only partially overlaping with that of FACE2.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 8EC: 4
>sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 Back     alignment and function description
>sp|Q80W54|FACE1_MOUSE CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 Back     alignment and function description
>sp|O75844|FACE1_HUMAN CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2 Back     alignment and function description
>sp|P47154|STE24_YEAST CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 Back     alignment and function description
>sp|Q10071|STE24_SCHPO Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1 Back     alignment and function description
>sp|Q54FH7|FACE1_DICDI CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum GN=zmpste24 PE=3 SV=1 Back     alignment and function description
>sp|P40769|YHFN_BACSU Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain 168) GN=yhfN PE=3 SV=2 Back     alignment and function description
>sp|A4G729|HTPX_HERAR Protease HtpX homolog OS=Herminiimonas arsenicoxydans GN=htpX PE=3 SV=1 Back     alignment and function description
>sp|A6SXH1|HTPX_JANMA Protease HtpX homolog OS=Janthinobacterium sp. (strain Marseille) GN=htpX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
255541686424 caax prenyl protease ste24, putative [Ri 0.997 0.997 0.912 0.0
224067924424 predicted protein [Populus trichocarpa] 0.995 0.995 0.924 0.0
225454328424 PREDICTED: CAAX prenyl protease 1 homolo 0.997 0.997 0.907 0.0
224130374424 predicted protein [Populus trichocarpa] 0.995 0.995 0.919 0.0
449432124424 PREDICTED: CAAX prenyl protease 1 homolo 1.0 1.0 0.903 0.0
449480231424 PREDICTED: CAAX prenyl protease 1 homolo 1.0 1.0 0.900 0.0
356568433424 PREDICTED: CAAX prenyl protease 1 homolo 0.997 0.997 0.877 0.0
356531957424 PREDICTED: CAAX prenyl protease 1 homolo 0.997 0.997 0.867 0.0
357507535426 CAAX prenyl protease-like protein [Medic 1.0 0.995 0.865 0.0
18411603424 CAAX prenyl protease 1-like protein [Ara 0.995 0.995 0.872 0.0
>gi|255541686|ref|XP_002511907.1| caax prenyl protease ste24, putative [Ricinus communis] gi|223549087|gb|EEF50576.1| caax prenyl protease ste24, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/423 (91%), Positives = 411/423 (97%)

Query: 1   MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
           M FPYMEAV+GFM+LMY FE+YLD+RQH ALKLP LPKTLEGVISQEKF+KSR YSLDKS
Sbjct: 1   MAFPYMEAVLGFMVLMYIFESYLDMRQHCALKLPTLPKTLEGVISQEKFKKSRAYSLDKS 60

Query: 61  HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
           HF+FVHEFVTIL+DSAIL F ILPW WK+SGNFL+LVGL+AENEILHTL+FLAGVM+WSQ
Sbjct: 61  HFNFVHEFVTILLDSAILYFGILPWSWKESGNFLLLVGLNAENEILHTLAFLAGVMIWSQ 120

Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
           +TDLPFSLYSTFVIEARHGFNKQTIWLFFRD+IKG+ LAI+LGPPIVSAII+IVQKGGPY
Sbjct: 121 ITDLPFSLYSTFVIEARHGFNKQTIWLFFRDLIKGICLAIILGPPIVSAIILIVQKGGPY 180

Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
           LAIYLWAFMFVLSLVMMT+YP+LIAPLFNKFTPLPEGELR KIE L+SSLKFPLKKLFVV
Sbjct: 181 LAIYLWAFMFVLSLVMMTIYPILIAPLFNKFTPLPEGELRSKIEALSSSLKFPLKKLFVV 240

Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
           DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSF+A
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFVA 300

Query: 301 VQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRS 360
           VQ+LT LQFGGYTLVRNSTDLF+SFGFDTQPVLIGLIIFQHTVIP+QHLVSFGLNLVSRS
Sbjct: 301 VQILTFLQFGGYTLVRNSTDLFQSFGFDTQPVLIGLIIFQHTVIPLQHLVSFGLNLVSRS 360

Query: 361 FEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPD 420
           FEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAA+DEPD
Sbjct: 361 FEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAALDEPD 420

Query: 421 KKE 423
           KKE
Sbjct: 421 KKE 423

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224067924|ref|XP_002302601.1| predicted protein [Populus trichocarpa] gi|222844327|gb|EEE81874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225454328|ref|XP_002277525.1| PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] gi|297745342|emb|CBI40422.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224130374|ref|XP_002320821.1| predicted protein [Populus trichocarpa] gi|222861594|gb|EEE99136.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449432124|ref|XP_004133850.1| PREDICTED: CAAX prenyl protease 1 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|449480231|ref|XP_004155836.1| PREDICTED: CAAX prenyl protease 1 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|356568433|ref|XP_003552415.1| PREDICTED: CAAX prenyl protease 1 homolog [Glycine max] Back     alignment and taxonomy information
>gi|356531957|ref|XP_003534542.1| PREDICTED: CAAX prenyl protease 1 homolog [Glycine max] Back     alignment and taxonomy information
>gi|357507535|ref|XP_003624056.1| CAAX prenyl protease-like protein [Medicago truncatula] gi|355499071|gb|AES80274.1| CAAX prenyl protease-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|18411603|ref|NP_567212.1| CAAX prenyl protease 1-like protein [Arabidopsis thaliana] gi|75303258|sp|Q8RX88.1|FACE1_ARATH RecName: Full=CAAX prenyl protease 1 homolog; AltName: Full=Farnesylated proteins-converting enzyme 1; Short=AtFACE-1; Short=FACE-1; AltName: Full=Prenyl protein-specific endoprotease 1; AltName: Full=Zinc metalloproteinase Ste24 homolog; Short=AtSTE24 gi|19699057|gb|AAL90896.1| AT4g01320/F2N1_21 [Arabidopsis thaliana] gi|30102490|gb|AAP21163.1| At4g01320/F2N1_21 [Arabidopsis thaliana] gi|332656608|gb|AEE82008.1| CAAX prenyl protease 1-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
TAIR|locus:2124983424 ATSTE24 [Arabidopsis thaliana 0.995 0.995 0.853 1.5e-193
RGD|1305570475 Zmpste24 "zinc metallopeptidas 0.634 0.566 0.470 2.3e-97
MGI|MGI:1890508475 Zmpste24 "zinc metallopeptidas 0.634 0.566 0.467 2.9e-97
UNIPROTKB|O75844475 ZMPSTE24 "CAAX prenyl protease 0.622 0.555 0.483 7.7e-97
UNIPROTKB|F1PY82473 ZMPSTE24 "Uncharacterized prot 0.622 0.558 0.479 9.8e-97
UNIPROTKB|E1BMF2475 ZMPSTE24 "Uncharacterized prot 0.622 0.555 0.479 1.3e-96
ZFIN|ZDB-GENE-030131-6312468 zmpste24 "zinc metallopeptidas 0.620 0.561 0.477 9.9e-95
UNIPROTKB|F1NDA2468 ZMPSTE24 "Uncharacterized prot 0.620 0.561 0.473 2.1e-94
ASPGD|ASPL0000071441456 AN11231 [Emericella nidulans ( 0.985 0.916 0.434 2.5e-88
CGD|CAL0000665456 STE24 [Candida albicans (taxid 0.959 0.892 0.443 7.7e-87
TAIR|locus:2124983 ATSTE24 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1875 (665.1 bits), Expect = 1.5e-193, P = 1.5e-193
 Identities = 360/422 (85%), Positives = 380/422 (90%)

Query:     1 MVFPYMEAVVGFMILMYFFETYLDLRQHXXXXXXXXXXTLEGVISQEKFEKSRGYSLDKS 60
             M  P+ME VVGFMI+MY FETYLDLRQ           TL GVISQEKFEKSR YSLDKS
Sbjct:     1 MAIPFMETVVGFMIVMYIFETYLDLRQLTALKLPTLPKTLVGVISQEKFEKSRAYSLDKS 60

Query:    61 HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
             +FHFVHEFVTILMDSAIL F ILPWFWK SG  L  +GLD ENEILHTLSFLAGVM WSQ
Sbjct:    61 YFHFVHEFVTILMDSAILFFGILPWFWKMSGAVLPRLGLDPENEILHTLSFLAGVMTWSQ 120

Query:   121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
             +TDLPFSLYSTFVIE+RHGFNKQTIW+F RDMIKG  L+++LGPPIV+AII IVQKGGPY
Sbjct:   121 ITDLPFSLYSTFVIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPY 180

Query:   181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
             LAIYLWAFMF+LSLVMMT+YPVLIAPLFNKFTPLP+G+LREKIEKLASSLKFPLKKLFVV
Sbjct:   181 LAIYLWAFMFILSLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVV 240

Query:   241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
             DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKN++EIVAVIAHELGHWKLNHT YSFIA
Sbjct:   241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNEDEIVAVIAHELGHWKLNHTTYSFIA 300

Query:   301 VQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRS 360
             VQ+L  LQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIP+QHLVSFGLNLVSR+
Sbjct:   301 VQILAFLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPLQHLVSFGLNLVSRA 360

Query:   361 FEFQADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPD 420
             FEFQADAFA KLGYA  LR  LVKLQEENLSAMNTDP YSAYHYSHPPLVERL AID  D
Sbjct:   361 FEFQADAFAVKLGYAKDLRPALVKLQEENLSAMNTDPLYSAYHYSHPPLVERLRAIDGED 420

Query:   421 KK 422
             KK
Sbjct:   421 KK 422
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0006508 "proteolysis" evidence=IEA;IDA
GO:0004175 "endopeptidase activity" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0080120 "CAAX-box protein maturation" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0051604 "protein maturation" evidence=RCA
RGD|1305570 Zmpste24 "zinc metallopeptidase STE24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1890508 Zmpste24 "zinc metallopeptidase, STE24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O75844 ZMPSTE24 "CAAX prenyl protease 1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PY82 ZMPSTE24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMF2 ZMPSTE24 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6312 zmpste24 "zinc metallopeptidase, STE24 homolog" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDA2 ZMPSTE24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ASPGD|ASPL0000071441 AN11231 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0000665 STE24 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8RX88FACE1_ARATH3, ., 4, ., 2, 4, ., 8, 40.87200.99520.9952yesno
Q80W54FACE1_MOUSE3, ., 4, ., 2, 4, ., 8, 40.45870.96220.8589yesno
O75844FACE1_HUMAN3, ., 4, ., 2, 4, ., 8, 40.46100.96220.8589yesno
Q54FH7FACE1_DICDI3, ., 4, ., 2, 4, ., 8, 40.39850.95040.9460yesno
Q6EPN8FACE1_ORYSJ3, ., 4, ., 2, 4, ., 8, 40.80891.00.9976yesno
P47154STE24_YEAST3, ., 4, ., 2, 4, ., 8, 40.41360.99050.9271yesno
Q10071STE24_SCHPO3, ., 4, ., 2, 4, ., 8, 40.39900.96690.8649yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.24.840.994
3rd Layer3.4.240.998

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_II1484
hypothetical protein (424 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
pfam01435223 pfam01435, Peptidase_M48, Peptidase family M48 5e-58
COG0501302 COG0501, HtpX, Zn-dependent protease with chaperon 9e-25
PRK03982288 PRK03982, PRK03982, heat shock protein HtpX; Provi 3e-06
PRK02391296 PRK02391, PRK02391, heat shock protein HtpX; Provi 4e-05
PRK05457284 PRK05457, PRK05457, heat shock protein HtpX; Provi 0.002
PTZ00029216 PTZ00029, PTZ00029, 60S ribosomal protein L10a; Pr 0.004
>gnl|CDD|216503 pfam01435, Peptidase_M48, Peptidase family M48 Back     alignment and domain information 
 Score =  189 bits (481), Expect = 5e-58
 Identities = 77/242 (31%), Positives = 109/242 (45%), Gaps = 32/242 (13%)

Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKF-TPLPEGELREKIEKLASS--LKFPLKKLFVVDGS 243
           A + + SLV+ T+    IA L N F TPL    L+  +E+LA S    FP  +++VVD  
Sbjct: 1   ALLLLSSLVLATIGAPYIAQLLNGFPTPLRNARLQRVVERLADSAGAGFPPWEVYVVD-- 58

Query: 244 TRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQV 303
             S   NA+  G  KNKR+V+   L+     ++E+ AV+ HE+GH K  H++ S     +
Sbjct: 59  --SPQPNAFALGGGKNKRVVVTTGLLL-ALTEDELAAVLGHEIGHIKARHSVESMSQGLL 115

Query: 304 LTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEF 363
           L LL   G   +      F + GF T                   L+   L   SR  E+
Sbjct: 116 LNLLLLLGAAALGGRALGFNANGFLT--------------ALGIFLLQLLLLPYSRKQEY 161

Query: 364 QADAFAKKLGYA----------SALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERL 413
           +AD    +LG             A    L KL  ENLS ++    Y     +HPPLVER+
Sbjct: 162 EADEAGARLGGDKDLARAGYKPRAAVKFLAKLAAENLSRVSGGKLYPELLSTHPPLVERI 221

Query: 414 AA 415
            A
Sbjct: 222 QA 223

Length = 223
>gnl|CDD|223575 COG0501, HtpX, Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|235186 PRK03982, PRK03982, heat shock protein HtpX; Provisional Back     alignment and domain information
>gnl|CDD|179418 PRK02391, PRK02391, heat shock protein HtpX; Provisional Back     alignment and domain information
>gnl|CDD|235478 PRK05457, PRK05457, heat shock protein HtpX; Provisional Back     alignment and domain information
>gnl|CDD|185405 PTZ00029, PTZ00029, 60S ribosomal protein L10a; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 424
KOG2719428 consensus Metalloprotease [General function predic 100.0
PRK03001283 M48 family peptidase; Provisional 100.0
PRK03982288 heat shock protein HtpX; Provisional 100.0
PRK01265324 heat shock protein HtpX; Provisional 100.0
PRK02391296 heat shock protein HtpX; Provisional 100.0
PRK03072288 heat shock protein HtpX; Provisional 100.0
PRK04897298 heat shock protein HtpX; Provisional 100.0
PRK02870336 heat shock protein HtpX; Provisional 100.0
PRK05457284 heat shock protein HtpX; Provisional 100.0
PRK01345317 heat shock protein HtpX; Provisional 100.0
PF01435226 Peptidase_M48: Peptidase family M48 This is family 99.97
COG0501302 HtpX Zn-dependent protease with chaperone function 99.96
COG4783 484 Putative Zn-dependent protease, contains TPR repea 99.73
PF05569299 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR0 99.72
KOG2661424 consensus Peptidase family M48 [Posttranslational 99.57
COG4219337 MecR1 Antirepressor regulating drug resistance, pr 99.46
COG4784 479 Putative Zn-dependent protease [General function p 99.27
PF04228292 Zn_peptidase: Putative neutral zinc metallopeptida 97.81
PF06114122 DUF955: Domain of unknown function (DUF955); Inter 97.35
PF10463206 Peptidase_U49: Peptidase U49; InterPro: IPR019504 97.28
PRK09672305 phage exclusion protein Lit; Provisional 97.03
COG1451223 Predicted metal-dependent hydrolase [General funct 96.75
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 96.69
PRK04351149 hypothetical protein; Provisional 96.6
PF04298222 Zn_peptidase_2: Putative neutral zinc metallopepti 96.03
PF1369979 DUF4157: Domain of unknown function (DUF4157) 95.5
COG2321295 Predicted metalloprotease [General function predic 95.13
smart00731146 SprT SprT homologues. Predicted to have roles in t 94.25
PF10026195 DUF2268: Predicted Zn-dependent protease (DUF2268) 94.12
PF10263157 SprT-like: SprT-like family; InterPro: IPR006640 T 93.8
PF04450205 BSP: Peptidase of plants and bacteria; InterPro: I 91.56
COG3091156 SprT Zn-dependent metalloprotease, SprT family [Ge 91.16
PF13203292 DUF2201_N: Putative metallopeptidase domain 90.87
PF12388211 Peptidase_M57: Dual-action HEIGH metallo-peptidase 89.86
PF08325186 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1 89.57
PRK04860160 hypothetical protein; Provisional 89.31
PF12725318 DUF3810: Protein of unknown function (DUF3810); In 88.17
COG2856213 Predicted Zn peptidase [Amino acid transport and m 86.9
PRK06926271 flagellar motor protein MotP; Reviewed 86.89
COG4900133 Predicted metallopeptidase [General function predi 86.42
PF02031132 Peptidase_M7: Streptomyces extracellular neutral p 85.13
cd04268165 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_ 82.98
>KOG2719 consensus Metalloprotease [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=7.4e-87  Score=651.97  Aligned_cols=415  Identities=51%  Similarity=0.858  Sum_probs=399.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CChhhcccCCHHHHHHHHHHhhhhhhHHHHHHHHHH-HHHHHHHHh
Q 014430            3 FPYMEAVVGFMILMYFFETYLDLRQHAALKLPK-LPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTI-LMDSAILLF   80 (424)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~l~~rq~~~~~~~~-~p~~~~~~~~~e~~~k~~~Y~~~~~~~~~~~~~~~~-~~~~~~l~~   80 (424)
                      .+|+.+++++++..+.||+||+.||++.+++++ +|+++.+.+|+|+++||++|+++|.++++++...+. ...+..+++
T Consensus         6 ~~~~~~i~~f~i~~~~~~~yl~~Rq~~~~~~~~~~p~el~~~~~~et~~kar~y~~~k~~f~i~~~~~~~~~~~l~~L~~   85 (428)
T KOG2719|consen    6 MCRKSIILFFSIFLYLFETYLTERQLKVLKRTKLVPKELGGIIDQETFKKARSYERDKSIFSIFNLLLSLVLLLLLELYL   85 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchHhhcCCCHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            468999999999999999999999999998774 899999999999999999999999999999999999 899999999


Q ss_pred             chHHHHHHHhhhHHHHhccCcchhHHHHHHHHHHHHHHHhhccccHHhhccchhhcccCCCCCCHHHHHHHHHHHHHHHH
Q 014430           81 RILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAI  160 (424)
Q Consensus        81 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~lP~~~y~~f~le~~~g~~~~t~~~~~~d~~k~~~l~~  160 (424)
                      |.+|++|..+++...+.     ++++++++|...++.++++..+|+++|++|++|++|||||+|.+.|+.|.+|+.++++
T Consensus        86 g~~~~lw~lt~~~~~~~-----~~~~~s~vF~~~~s~~~~l~~LP~~iys~fvie~~~gfnk~t~~~~~~d~lk~~~v~~  160 (428)
T KOG2719|consen   86 GALPFLWKLTGKFLGKA-----GEIWLSLVFLLLLSIYSTLLDLPSSIYSTFVLEEKHGFNKQTLSLFIIDGLKSLLVGV  160 (428)
T ss_pred             hHHHHHHHHHHHHhhhh-----hhhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCcCcchhHHHHHHHHHHHHH
Confidence            99999999998776553     3899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhhhHhhhhhcccCccCCchhHHHHHHHHHHHcCCCCCcEEEE
Q 014430          161 VLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV  240 (424)
Q Consensus       161 vl~~~l~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~i~plf~~~~pl~~~~L~~~i~~l~~~~g~~~~~i~v~  240 (424)
                      +++.|+.+++.+++..+|+++.+|+|++.+++++++..++|..|+|+|+|++|+|+++++++||++|++.|+|.++++++
T Consensus       161 ~l~~Pi~~~iv~i~~~~g~yF~i~~w~f~~v~~l~l~ti~p~~i~P~f~K~~PLe~g~l~~~Ie~la~s~gfp~~k~~vi  240 (428)
T KOG2719|consen  161 VLTIPIVAAIVMILKKFGPYFFIYLWLFYFVLSLLLLTIYPGFIAPLFGKFTPLEEGDLKEKIERLADSVGFPLSKYRVI  240 (428)
T ss_pred             HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCCchHHHHHHHHHhcCCCceEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCcccEEEEecCCCceEeEchhHHh-h--cCChhHHHHHHHHHHhhhhcccHHHHHHHHHHHHHHHHHHHHHHhc
Q 014430          241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQ-Q--CKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRN  317 (424)
Q Consensus       241 d~s~rs~~~NA~~~G~~~~~~Ivl~d~Ll~-~--l~~~~Ei~aVLaHElgH~~~~h~~~~~~~~~~~~~~~~~l~~~~~~  317 (424)
                      |+|+|++|+|||++|+++.||||++||++. +  + ++||+.||+|||+|||+++|+.|++.+..+..++.+++++.++.
T Consensus       241 ~~s~rs~hsNAyfyG~~~~KRIvIyDtLl~~~~~~-~~eel~AVl~HELGHW~~~H~~K~~ii~~~~l~l~~llF~~~~~  319 (428)
T KOG2719|consen  241 DGSKRSSHSNAYFYGLCKNKRIVIYDTLLLEEEHL-NNEELVAVLAHELGHWKLNHVLKNIIIMQIHLFLEFLLFGFLYR  319 (428)
T ss_pred             ecCCCCCCCCeeeeeccccceEEEehhhhhhhhcc-ccHHHHHHHHHHhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999993 2  4 78999999999999999999999999999999999999999999


Q ss_pred             CchhhhhcCCCC-CchHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCChHHHHHHHHHHHHhhCCCCCC
Q 014430          318 STDLFRSFGFDT-QPVLIGLI-IFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEENLSAMNT  395 (424)
Q Consensus       318 ~~~l~~~~g~~~-~~~~i~l~-l~~~i~~~~~~l~~~~~~~~sR~~E~~AD~~A~~lg~~~~l~~aL~kL~~~n~~~~~~  395 (424)
                      ++++|.++|+.+ .|..+|++ +|...++|+..+.+++++..||+.||+||+||.++|+++++.+||.|++.||++.|.+
T Consensus       320 ~~~ly~a~Gf~~~~P~~ig~livf~~~l~py~~l~~~~~n~~sR~fEyqAD~fA~klGYg~~L~~AL~KL~~dnlsf~~~  399 (428)
T KOG2719|consen  320 NPKLYAAFGFIDEQPSLIGFLIVFQFVLAPYRALLNFLMNLISRRFEYQADAFAKKLGYGKDLRQALIKLFVDNLSFPVS  399 (428)
T ss_pred             CcchheeecCCCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhcCCCCC
Confidence            999999999987 89999998 8889999999999999999999999999999999999999999999999999999999


Q ss_pred             ChhhhhhhcCCCChHHHHHHccccCccC
Q 014430          396 DPWYSAYHYSHPPLVERLAAIDEPDKKE  423 (424)
Q Consensus       396 ~~ly~~~~~sHP~l~eRi~~L~~~~~~~  423 (424)
                      |++|+.|++|||++.|||++++....|+
T Consensus       400 D~LYs~~~~~HPtvleRl~~l~~~~~k~  427 (428)
T KOG2719|consen  400 DPLYSAWHHLHPTVLERLDALDYLSEKK  427 (428)
T ss_pred             cHHHHHHHhcCchHHHHHHHHHHHHhhc
Confidence            9999999999999999999999877665

>PRK03001 M48 family peptidase; Provisional Back     alignment and domain information
>PRK03982 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01265 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02391 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK03072 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK04897 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02870 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK05457 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01345 heat shock protein HtpX; Provisional Back     alignment and domain information
>PF01435 Peptidase_M48: Peptidase family M48 This is family M48 in the peptidase classification Back     alignment and domain information
>COG0501 HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>PF05569 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR008756 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2661 consensus Peptidase family M48 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4219 MecR1 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>COG4784 Putative Zn-dependent protease [General function prediction only] Back     alignment and domain information
>PF04228 Zn_peptidase: Putative neutral zinc metallopeptidase; InterPro: IPR007343 Members of this family of bacterial proteins are described as hypothetical proteins or zinc metallopeptidases Back     alignment and domain information
>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function Back     alignment and domain information
>PF10463 Peptidase_U49: Peptidase U49; InterPro: IPR019504 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK09672 phage exclusion protein Lit; Provisional Back     alignment and domain information
>COG1451 Predicted metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>PRK04351 hypothetical protein; Provisional Back     alignment and domain information
>PF04298 Zn_peptidase_2: Putative neutral zinc metallopeptidase; InterPro: IPR007395 Members of this family of bacterial proteins are described as hypothetical proteins or zinc-dependent proteases Back     alignment and domain information
>PF13699 DUF4157: Domain of unknown function (DUF4157) Back     alignment and domain information
>COG2321 Predicted metalloprotease [General function prediction only] Back     alignment and domain information
>smart00731 SprT SprT homologues Back     alignment and domain information
>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function Back     alignment and domain information
>PF10263 SprT-like: SprT-like family; InterPro: IPR006640 This is a family of uncharacterised bacterial proteins which includes Escherichia coli SprT (P39902 from SWISSPROT) Back     alignment and domain information
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] Back     alignment and domain information
>COG3091 SprT Zn-dependent metalloprotease, SprT family [General function prediction only] Back     alignment and domain information
>PF13203 DUF2201_N: Putative metallopeptidase domain Back     alignment and domain information
>PF12388 Peptidase_M57: Dual-action HEIGH metallo-peptidase; InterPro: IPR024653 This entry represents the metallopeptidases M10, M27 and M57 Back     alignment and domain information
>PF08325 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1-like metalloprotease) domain is a globular domain related to the zincin-like superfamily of Zn-dependent peptidase Back     alignment and domain information
>PRK04860 hypothetical protein; Provisional Back     alignment and domain information
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised Back     alignment and domain information
>COG2856 Predicted Zn peptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06926 flagellar motor protein MotP; Reviewed Back     alignment and domain information
>COG4900 Predicted metallopeptidase [General function prediction only] Back     alignment and domain information
>PF02031 Peptidase_M7: Streptomyces extracellular neutral proteinase (M7) family; InterPro: IPR000013 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd04268 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_like subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
4aw6_A482 Crystal Structure Of The Human Nuclear Membrane Zin 4e-99
2ypt_A482 Crystal Structure Of The Human Nuclear Membrane Zin 2e-98
4il3_A461 Crystal Structure Of S. Mikatae Ste24p Length = 461 7e-87
>pdb|4AW6|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 (Face1) Length = 482 Back     alignment and structure 
Iteration: 1

 Score =  358 bits (918), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 204/449 (45%), Positives = 272/449 (60%), Gaps = 41/449 (9%)
Query: 8   AVVGFMILMYFFETYLDLRQHXXXXXXXXXX-TLEGVISQEKFEKSRGYSLDKSHFHFVH 66
           AV+ F   +Y +ET+L  RQ             L  ++  E FEKSR Y LDKS F F  
Sbjct: 22  AVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81
Query: 67  EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
              +    + ILLF  +P+ W+ SG F    G   E EI  +L FL    L+S L  LP+
Sbjct: 82  GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPW 141
Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
           SLY+TFVIE +HGFN+QT+  F +D IK  ++   +  P+ S ++ I++ GG Y  IY W
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAW 201
Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
            F  V+SLV++T+Y   IAPLF+KFTPLPEG+L+E+IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRS 261
Query: 247 SHSNAYMYGFFKNKRIVLYDTLI------------------------------------- 269
           SHSNAY YGFFKNKRIVL+DTL+                                     
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKK 321
Query: 270 QQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGF-D 328
           Q CKN EE++AV+ HELGHWKL HT+ + I  Q+ + L F  + ++    +LF +FGF D
Sbjct: 322 QGCKN-EEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYD 380
Query: 329 TQPVLIG-LIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQE 387
           +QP LIG LIIFQ    P   ++SF L ++SR FEFQADAFAKKLG A  L + L+KL +
Sbjct: 381 SQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNK 440
Query: 388 ENLSAMNTDPWYSAYHYSHPPLVERLAAI 416
           +NL    +D  +S +HYSHPPL+ERL A+
Sbjct: 441 DNLGFPVSDWLFSMWHYSHPPLLERLQAL 469
>pdb|2YPT|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 Mutant (E336a) In Complex With A Synthetic Csim Tetrapeptide From The C-Terminus Of Prelamin A Length = 482 Back     alignment and structure
>pdb|4IL3|A Chain A, Crystal Structure Of S. Mikatae Ste24p Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 1e-109
3c37_A253 Peptidase, M48 family; Q74D82, GSR143A, structural 6e-06
3cqb_A107 Probable protease HTPX homolog; heat shock protein 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} Length = 482 Back     alignment and structure
 Score =  330 bits (846), Expect = e-109
 Identities = 196/456 (42%), Positives = 270/456 (59%), Gaps = 39/456 (8%)

Query: 8   AVVGFMILMYFFETYLDLRQHAALKLP-KLPKTLEGVISQEKFEKSRGYSLDKSHFHFVH 66
           AV+ F   +Y +ET+L  RQ    K    +P  L  ++  E FEKSR Y LDKS F F  
Sbjct: 22  AVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81

Query: 67  EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
              +    + ILLF  +P+ W+ SG F    G   E EI  +L FL    L+S L  LP+
Sbjct: 82  GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPW 141

Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
           SLY+TFVIE +HGFN+QT+  F +D IK  ++   +  P+ S ++ I++ GG Y  IY W
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAW 201

Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
            F  V+SLV++T+Y   IAPLF+KFTPLPEG+L+E+IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRS 261

Query: 247 SHSNAYMYGFFKNKRIVLYDTLIQQCK--------------------------------- 273
           SHSNAY YGFFKNKRIVL+DTL+++                                   
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKK 321

Query: 274 ---NDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQ 330
               +EE++AV+ HELGHWKL HT+ + I  Q+ + L F  + ++    +LF +FGF   
Sbjct: 322 QGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDS 381

Query: 331 PV--LIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQEE 388
               +  LIIFQ    P   ++SF L ++SR FEFQADAFAKKLG A  L + L+KL ++
Sbjct: 382 QPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNKD 441

Query: 389 NLSAMNTDPWYSAYHYSHPPLVERLAAIDEPDKKEK 424
           NL    +D  +S +HYSHPPL+ERL A+    +  +
Sbjct: 442 NLGFPVSDWLFSMWHYSHPPLLERLQALKTMKQHAE 477
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca} Length = 253 Back     alignment and structure
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Length = 107 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query424
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 100.0
3c37_A253 Peptidase, M48 family; Q74D82, GSR143A, structural 99.95
3cqb_A107 Probable protease HTPX homolog; heat shock protein 99.69
3dte_A301 IRRE protein; radiotolerance, gene regulation, met 96.86
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A Back     alignment and structure
Probab=100.00  E-value=1.9e-92  Score=721.62  Aligned_cols=418  Identities=48%  Similarity=0.832  Sum_probs=386.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCChhhcccCCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhchH
Q 014430            5 YMEAVVGFMILMYFFETYLDLRQHAALKLP-KLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRIL   83 (424)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~l~~rq~~~~~~~-~~p~~~~~~~~~e~~~k~~~Y~~~~~~~~~~~~~~~~~~~~~~l~~g~~   83 (424)
                      ..++++++++++++||.||++||+|+++++ ++|+++++.+|+|+|+||++|+++|.+|++++++++.+..++++++|++
T Consensus        19 ~~~~il~~~~~~~~~e~yL~~RQ~~~~~~~~~vP~~l~~~~~~e~f~ka~~Y~~~k~~f~~~~~~~~~i~~~~~l~~g~~   98 (482)
T 4aw6_A           19 IFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGI   98 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            567899999999999999999999998754 8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhHHHHhccCcchhHHHHHHHHHHHHHHHhhccccHHhhccchhhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 014430           84 PWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLG  163 (424)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~lP~~~y~~f~le~~~g~~~~t~~~~~~d~~k~~~l~~vl~  163 (424)
                      |++|++++++....+....++++++++|+++++++++++++||++|+||++|+||||||||++.|++|++|+.+++.+++
T Consensus        99 ~~lw~~~~~~~~~~~~~~~~~i~~s~~f~~~~~l~~~l~~LP~~~Y~tfvle~~~Gfnk~t~~~f~~D~~k~~~l~~vi~  178 (482)
T 4aw6_A           99 PYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCIL  178 (482)
T ss_dssp             HHHHHHTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhHHHHHHheeehhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999887766554333357899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhhhHhhhhhcccCccCCchhHHHHHHHHHHHcCCCCCcEEEEeCC
Q 014430          164 PPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGS  243 (424)
Q Consensus       164 ~~l~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~i~plf~~~~pl~~~~L~~~i~~l~~~~g~~~~~i~v~d~s  243 (424)
                      +|++++++|+++++|++||+|+|++.+++++++.+++|.+|.|+|||++|++|++|+++|+++|+++|+|.+++|++|+|
T Consensus       179 ~pl~~~~~~ii~~~g~~~wl~~w~~~~~~~l~~~~iyP~~I~PLfnk~~Pl~dg~L~~~Ie~la~~~~fp~~~v~vv~gS  258 (482)
T 4aw6_A          179 LPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGS  258 (482)
T ss_dssp             HHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCEEECCSSHHHHHHHHHHHHTTCCEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCcHHHHHHHHHHHHHcCCCCCcEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccEEEEecCCCceEeEchhHHhh-------------------------------------cCChhHHHHHHHHHH
Q 014430          244 TRSSHSNAYMYGFFKNKRIVLYDTLIQQ-------------------------------------CKNDEEIVAVIAHEL  286 (424)
Q Consensus       244 ~rs~~~NA~~~G~~~~~~Ivl~d~Ll~~-------------------------------------l~~~~Ei~aVLaHEl  286 (424)
                      +||+|+|||++|++++||||++||++++                                     + ++||++||+|||+
T Consensus       259 kRs~~~NAy~~G~~~~krIVl~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~El~aVlaHEl  337 (482)
T 4aw6_A          259 KRSSHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGC-KNEEVLAVLGHEL  337 (482)
T ss_dssp             GTBSCCCEEEEESSSCEEEEEEHHHHC------------------------------------CCC-CHHHHHHHHHHHH
T ss_pred             CCCCCCceEEEcCCCCcEEEEEchHHHhcccccccccccccccccccccccchhhcccchhhccCC-CHHHHHHHHHHHH
Confidence            9999999999999999999999999998                                     8 9999999999999


Q ss_pred             hhhhcccHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhcCCC-CCchHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 014430          287 GHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFD-TQPVLIGLI-IFQHTVIPIQHLVSFGLNLVSRSFEFQ  364 (424)
Q Consensus       287 gH~~~~h~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~g~~-~~~~~i~l~-l~~~i~~~~~~l~~~~~~~~sR~~E~~  364 (424)
                      ||++++|+.+++.++.+..++.+++++.+.+++.++.++|++ ..|..+++. ++..+++|++.+.+++.+.+||++|++
T Consensus       338 gH~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~l~~~~G~~~~~p~~~~~llv~~~i~~P~~~l~~~i~~~~SR~~E~e  417 (482)
T 4aw6_A          338 GHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDSQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQ  417 (482)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHTTCCSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcccHHHHHHHHHHHHHHHHHHHHHHHcchhhHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            999999999999999988888888999999988899999985 346666654 456777899999999999999999999


Q ss_pred             HHHHHHHcCChHHHHHHHHHHHHhhCCCCCCChhhhhhhcCCCChHHHHHHccccCccC
Q 014430          365 ADAFAKKLGYASALRAGLVKLQEENLSAMNTDPWYSAYHYSHPPLVERLAAIDEPDKKE  423 (424)
Q Consensus       365 AD~~A~~lg~~~~l~~aL~kL~~~n~~~~~~~~ly~~~~~sHP~l~eRi~~L~~~~~~~  423 (424)
                      ||++|+++|+++++++||.|++++|.+.+.+|++|+.+++|||++.|||+++++.++|.
T Consensus       418 AD~~a~~lg~p~~L~~AL~KL~~~n~s~~~~~~~~~~~~sTHP~~~eRI~~L~~~~~~~  476 (482)
T 4aw6_A          418 ADAFAKKLGKAKDLYSALIKLNKDNLGFPVSDWLFSMWHYSHPPLLERLQALKTMKQHA  476 (482)
T ss_dssp             HHHHHHHTTTHHHHHHHHHHHHHHTTCCSCCCHHHHHHSCSSCCHHHHHHHHHHC----
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhcccCCCCChHHHHHhcCCcCHHHHHHHHHHhhHhh
Confidence            99999999999999999999999999999999999999999999999999999887664
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca} Back     alignment and structure
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00