Citrus Sinensis ID: 014490

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420---
MGSSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS
cccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHcccccHHHHHHHHHHHHHcccccccHHcHHHHHHHHHHHHccccEEEcccccEEEEEEccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHccccccccEEEEEccccccccEEEEEccccccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHcccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHc
ccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccEEEccccccEEEEEEccccccEEEEEEcccccccHHcccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccHHHHHHccccccccEEEEEEcccccccEEEEEcccccEccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHc
MGSSKLLSLLVTLYLLaptsissdvslspeeltqiPVKFldfakkpeIFYWMVNIRRKihenpelgfqefETSKLIRAELdqmgipykfpvAVTGVvgyigtgqppfVALRADMDALAMEESVEWehkskvpgkmhacgHDAHVAMLLGAAKMLQVFRHEIKGTIVLvfqpaeeggggakKMLDAGALENVEAIFGLHvsslfpvgtvasrpgptlaaggFFEAvingkgghaaipqhtidpivAASNVIVSLQHLvsreadpldsqVLTVAKfegggafniipdsvtiggtfrAFSKESIIQLKQRIEEVVMKQASvqrcnatvtfddksfypvtvnnkNLHEHFQKVAADMLGvqnikenrplmgtedfsffaeaipgyfyylgmndetkgkfetghspyfrvnedalpyGAALHASLATS
MGSSKLLSLLVTLYLLAPTsissdvslspeELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS
MGsskllsllvtlyllAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS
*****LLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAAL*******
***SKLLSLLVTLYLLAPTSIS********************AKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS
MGSSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS
*GSSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLATS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query423 2.2.26 [Sep-21-2011]
O04373440 IAA-amino acid hydrolase yes no 0.978 0.940 0.680 1e-171
Q8S9S4442 IAA-amino acid hydrolase yes no 0.914 0.875 0.705 1e-165
Q84XG9442 IAA-amino acid hydrolase N/A no 0.914 0.875 0.705 1e-165
P54970439 IAA-amino acid hydrolase no no 0.919 0.886 0.652 1e-155
Q9SWX9435 IAA-amino acid hydrolase no no 0.988 0.960 0.617 1e-154
P54969438 IAA-amino acid hydrolase no no 0.917 0.885 0.633 1e-149
Q5N8F2456 IAA-amino acid hydrolase no no 0.910 0.844 0.6 1e-138
Q5Z678510 IAA-amino acid hydrolase no no 0.881 0.731 0.534 1e-120
P54968442 IAA-amino acid hydrolase no no 0.926 0.886 0.527 1e-117
Q8VYX0464 IAA-amino acid hydrolase no no 0.872 0.795 0.523 1e-116
>sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2 Back     alignment and function desciption
 Score =  603 bits (1554), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 286/420 (68%), Positives = 350/420 (83%), Gaps = 6/420 (1%)

Query: 5   KLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPE 64
           K +S ++ L+LL PT IS     S   L+QIP KFL  AK+ + F WMV IRR+IHENPE
Sbjct: 5   KWVSFVLILHLLNPTLISC----SSNGLSQIPSKFLTLAKRNDFFDWMVGIRRRIHENPE 60

Query: 65  LGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVE 124
           LG++E ETSKL+RAEL++MG+ YK+PVAVTGVVGY+GTG  PFVALRADMDALAM+E VE
Sbjct: 61  LGYEEVETSKLVRAELEKMGVSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVE 120

Query: 125 WEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLD 184
           WEHKSKVPGKMHACGHDAH  MLLGAAK+L+    E++GT+VLVFQPAEEGGGGAKK+++
Sbjct: 121 WEHKSKVPGKMHACGHDAHTTMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVE 180

Query: 185 AGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIV 244
           AG LENV AIFGLHV++   +G V+SR GP LA  GFF+A I+GKGGHAA+PQHTIDPI+
Sbjct: 181 AGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPIL 240

Query: 245 AASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQL 304
           AASNVIVSLQHLVSREADPLDSQV+TVAKFEGGGAFN+IPDSVTIGGTFRAFS +S +QL
Sbjct: 241 AASNVIVSLQHLVSREADPLDSQVVTVAKFEGGGAFNVIPDSVTIGGTFRAFSTKSFMQL 300

Query: 305 KQRIEEVVMKQASVQRCNATVTF--DDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKEN 362
           K+RIE+V+ +QASV  CNATV F  ++K F+P TVN+K LH+ F+ V+ DMLG++N  E 
Sbjct: 301 KKRIEQVITRQASVNMCNATVDFIEEEKPFFPPTVNDKALHQFFKNVSGDMLGIENYVEM 360

Query: 363 RPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422
           +PLMG+EDFSF+ +AIPG+F ++GM ++ +    + HSPYF VNE+ LPYGA+LHAS+AT
Sbjct: 361 QPLMGSEDFSFYQQAIPGHFSFVGMQNKARSPMASPHSPYFEVNEELLPYGASLHASMAT 420
Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Ala.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q8S9S4|ILL1_ORYSJ IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2 Back     alignment and function description
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1 Back     alignment and function description
>sp|P54969|ILL1_ARATH IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1 Back     alignment and function description
>sp|Q5N8F2|ILL2_ORYSJ IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z678|ILL6_ORYSJ IAA-amino acid hydrolase ILR1-like 6 OS=Oryza sativa subsp. japonica GN=ILL6 PE=2 SV=1 Back     alignment and function description
>sp|P54968|ILR1_ARATH IAA-amino acid hydrolase ILR1 OS=Arabidopsis thaliana GN=ILR1 PE=1 SV=2 Back     alignment and function description
>sp|Q8VYX0|ILL6_ARATH IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query423
225445012439 PREDICTED: IAA-amino acid hydrolase ILR1 0.985 0.949 0.751 0.0
225442363441 PREDICTED: IAA-amino acid hydrolase ILR1 0.990 0.950 0.717 1e-180
147782365441 hypothetical protein VITISV_033718 [Viti 0.990 0.950 0.717 1e-179
147840661416 hypothetical protein VITISV_007874 [Viti 0.891 0.906 0.796 1e-179
449435806445 PREDICTED: IAA-amino acid hydrolase ILR1 0.997 0.948 0.726 1e-179
449489833445 PREDICTED: LOW QUALITY PROTEIN: IAA-amin 0.997 0.948 0.726 1e-178
449458197449 PREDICTED: IAA-amino acid hydrolase ILR1 0.997 0.939 0.700 1e-177
297738714406 unnamed protein product [Vitis vinifera] 0.877 0.913 0.801 1e-177
224070738438 iaa-amino acid hydrolase 11 [Populus tri 0.966 0.933 0.705 1e-175
404325816441 jasmonoyl-L-isoleucine hydrolase 1 [Nico 0.983 0.943 0.697 1e-174
>gi|225445012|ref|XP_002283047.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/422 (75%), Positives = 361/422 (85%), Gaps = 5/422 (1%)

Query: 1   MGSSKLLSLLVTLYLLAPTSISSDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIH 60
           MG    L  +  L++   T  SS+    PE L QI   FLD+A++PEI  WMV IRR IH
Sbjct: 1   MGLGNWLRSIFILHMFVATLSSSN----PERLAQISADFLDYAREPEISEWMVGIRRIIH 56

Query: 61  ENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAME 120
           ENPELGF+EFETSKLIR ELD+M IPY+FPVAVTGVVG+IGTG+PPFVA+RADMDAL M+
Sbjct: 57  ENPELGFEEFETSKLIRTELDKMDIPYRFPVAVTGVVGFIGTGEPPFVAIRADMDALPMQ 116

Query: 121 ESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAK 180
           E VEWEHKSK+PGKMHACGHDAHVAMLLGAAKMLQ  RH+++GT+VLVFQPAEE  GGAK
Sbjct: 117 EGVEWEHKSKIPGKMHACGHDAHVAMLLGAAKMLQKHRHDLQGTVVLVFQPAEERDGGAK 176

Query: 181 KMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTI 240
           KML+ G LEN++AIFGLHVS   P+G+VASR GP LAA GFF+AVI+GKGGHAA+PQH+I
Sbjct: 177 KMLETGILENIDAIFGLHVSPRVPIGSVASRSGPVLAACGFFDAVISGKGGHAALPQHSI 236

Query: 241 DPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKES 300
           DPI+AASNVIVSLQ LVSREADPLDSQV+TVAKF+GGGAFN+IPDSVTIGGTFRAFSKES
Sbjct: 237 DPILAASNVIVSLQQLVSREADPLDSQVVTVAKFKGGGAFNVIPDSVTIGGTFRAFSKES 296

Query: 301 IIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIK 360
            +QLKQRIEEV+  Q+SVQRCNATV F+D  FYPVT NNK+LH+HFQ VA DMLG QNIK
Sbjct: 297 FLQLKQRIEEVITLQSSVQRCNATVHFND-PFYPVTANNKDLHKHFQNVAGDMLGTQNIK 355

Query: 361 ENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASL 420
           E   +MG EDFSFFAEAIPGYFYYLGM +ET+G+ E GH+PY+ VNEDALPYGAALHASL
Sbjct: 356 EMPLVMGAEDFSFFAEAIPGYFYYLGMKNETRGQLELGHTPYYTVNEDALPYGAALHASL 415

Query: 421 AT 422
           AT
Sbjct: 416 AT 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225442363|ref|XP_002281321.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Vitis vinifera] gi|297743123|emb|CBI35990.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147782365|emb|CAN70580.1| hypothetical protein VITISV_033718 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147840661|emb|CAN61999.1| hypothetical protein VITISV_007874 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449435806|ref|XP_004135685.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449489833|ref|XP_004158429.1| PREDICTED: LOW QUALITY PROTEIN: IAA-amino acid hydrolase ILR1-like 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449458197|ref|XP_004146834.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Cucumis sativus] gi|449476689|ref|XP_004154807.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297738714|emb|CBI27959.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224070738|ref|XP_002303219.1| iaa-amino acid hydrolase 11 [Populus trichocarpa] gi|222840651|gb|EEE78198.1| iaa-amino acid hydrolase 11 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|404325816|gb|AFR58665.1| jasmonoyl-L-isoleucine hydrolase 1 [Nicotiana attenuata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query423
TAIR|locus:2017607440 IAR3 "AT1G51760" [Arabidopsis 0.940 0.904 0.695 4.5e-153
TAIR|locus:2164976439 ILL2 "AT5G56660" [Arabidopsis 0.943 0.908 0.643 3.4e-141
TAIR|locus:2017577435 ILL5 "AT1G51780" [Arabidopsis 0.940 0.914 0.635 1.1e-137
TAIR|locus:2165076438 ILL1 "AT5G56650" [Arabidopsis 0.917 0.885 0.633 5.2e-136
TAIR|locus:2823614464 ILL6 "IAA-leucine resistant (I 0.895 0.816 0.525 3e-108
TAIR|locus:2075382442 ILR1 "AT3G02875" [Arabidopsis 0.907 0.868 0.536 9.2e-107
TAIR|locus:2166557428 ILL3 "AT5G54140" [Arabidopsis 0.877 0.866 0.491 2.3e-94
TIGR_CMR|SPO_2808387 SPO_2808 "amidohydrolase famil 0.877 0.958 0.398 1.8e-62
TIGR_CMR|SPO_2809389 SPO_2809 "amidohydrolase famil 0.843 0.917 0.418 1.2e-60
TIGR_CMR|SPO_2810387 SPO_2810 "amidohydrolase famil 0.879 0.961 0.394 8.1e-60
TAIR|locus:2017607 IAR3 "AT1G51760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1493 (530.6 bits), Expect = 4.5e-153, P = 4.5e-153
 Identities = 278/400 (69%), Positives = 339/400 (84%)

Query:    25 VSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG 84
             +S S   L+QIP KFL  AK+ + F WMV IRR+IHENPELG++E ETSKL+RAEL++MG
Sbjct:    21 ISCSSNGLSQIPSKFLTLAKRNDFFDWMVGIRRRIHENPELGYEEVETSKLVRAELEKMG 80

Query:    85 IPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHV 144
             + YK+PVAVTGVVGY+GTG  PFVALRADMDALAM+E VEWEHKSKVPGKMHACGHDAH 
Sbjct:    81 VSYKYPVAVTGVVGYVGTGHAPFVALRADMDALAMQEMVEWEHKSKVPGKMHACGHDAHT 140

Query:   145 AMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFP 204
              MLLGAAK+L+    E++GT+VLVFQPAEEGGGGAKK+++AG LENV AIFGLHV++   
Sbjct:   141 TMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLA 200

Query:   205 VGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPL 264
             +G V+SR GP LA  GFF+A I+GKGGHAA+PQHTIDPI+AASNVIVSLQHLVSREADPL
Sbjct:   201 LGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPL 260

Query:   265 DSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNAT 324
             DSQV+TVAKFEGGGAFN+IPDSVTIGGTFRAFS +S +QLK+RIE+V+ +QASV  CNAT
Sbjct:   261 DSQVVTVAKFEGGGAFNVIPDSVTIGGTFRAFSTKSFMQLKKRIEQVITRQASVNMCNAT 320

Query:   325 VTF--DDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYF 382
             V F  ++K F+P TVN+K LH+ F+ V+ DMLG++N  E +PLMG+EDFSF+ +AIPG+F
Sbjct:   321 VDFIEEEKPFFPPTVNDKALHQFFKNVSGDMLGIENYVEMQPLMGSEDFSFYQQAIPGHF 380

Query:   383 YYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT 422
              ++GM ++ +    + HSPYF VNE+ LPYGA+LHAS+AT
Sbjct:   381 SFVGMQNKARSPMASPHSPYFEVNEELLPYGASLHASMAT 420
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0010179 "IAA-Ala conjugate hydrolase activity" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP
TAIR|locus:2164976 ILL2 "AT5G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017577 ILL5 "AT1G51780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165076 ILL1 "AT5G56650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823614 ILL6 "IAA-leucine resistant (ILR)-like gene 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075382 ILR1 "AT3G02875" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166557 ILL3 "AT5G54140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2808 SPO_2808 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2809 SPO_2809 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2810 SPO_2810 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P80092CBPX1_SULSO3, ., 4, ., 1, 7, ., -0.40430.84630.9109yesno
O04373ILL4_ARATH3, ., 5, ., 1, ., -0.68090.97870.9409yesno
Q84XG9ILL1_ORYSI3, ., 5, ., 1, ., -0.70510.91480.8755N/Ano
P58156CBPX2_SULSO3, ., 4, ., 1, 7, ., -0.41530.84630.9109yesno
O07598YHAA_BACSU3, ., 5, ., 1, ., -0.39410.88410.9444yesno
P45493HIPO_CAMJE3, ., 5, ., 1, ., 3, 20.36650.84630.9347yesno
Q8S9S4ILL1_ORYSJ3, ., 5, ., 1, ., -0.70510.91480.8755yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016617001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (439 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query423
cd08017377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 0.0
PLN02693437 PLN02693, PLN02693, IAA-amino acid hydrolase 0.0
PLN02280478 PLN02280, PLN02280, IAA-amino acid hydrolase 0.0
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 0.0
cd08019372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 1e-148
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 1e-147
cd05666373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 1e-146
cd08660363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1e-134
TIGR01891363 TIGR01891, amidohydrolases, amidohydrolase 1e-131
cd05667402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 1e-127
cd05669372 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoac 1e-117
cd05664398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 1e-111
cd08014372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 1e-106
cd05670367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 9e-95
cd08018365 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoac 2e-68
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 3e-59
cd05665415 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Amin 1e-58
cd05668374 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylas 3e-53
cd03887358 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1- 1e-39
cd05672358 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacyla 2e-35
cd09849388 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacy 5e-31
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 8e-24
cd05673434 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacyla 4e-19
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 3e-17
cd05683366 cd05683, M20_peptT_like, M20 Peptidase T like enzy 3e-14
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 4e-11
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 4e-11
PRK08651394 PRK08651, PRK08651, succinyl-diaminopimelate desuc 2e-10
TIGR01910375 TIGR01910, DapE-ArgE, acetylornithine deacetylase 3e-10
cd03885363 cd03885, M20_CPDG2, M20 Peptidase Glutamate carbox 1e-08
cd03896359 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspar 2e-06
TIGR01883361 TIGR01883, PepT-like, peptidase T-like protein 2e-06
TIGR01892364 TIGR01892, AcOrn-deacetyl, acetylornithine deacety 5e-06
COG2195414 COG2195, PepD, Di- and tripeptidases [Amino acid t 5e-06
cd03884399 cd03884, M20_bAS, M20 Peptidase beta-alanine synth 2e-05
PRK08588377 PRK08588, PRK08588, succinyl-diaminopimelate desuc 4e-05
cd02697395 cd02697, M20_like, M20 Zn-peptidases include exope 4e-05
cd03894372 cd03894, M20_ArgE, M20 Peptidase acetylornithine d 5e-05
TIGR01900351 TIGR01900, dapE-gram_pos, succinyl-diaminopimelate 3e-04
cd08012423 cd08012, M20_ArgE-related, M20 Peptidases with sim 0.001
PRK07338402 PRK07338, PRK07338, hypothetical protein; Provisio 0.001
PRK07522385 PRK07522, PRK07522, acetylornithine deacetylase; P 0.001
TIGR01879400 TIGR01879, hydantase, amidase, hydantoinase/carbam 0.001
PRK12893412 PRK12893, PRK12893, allantoate amidohydrolase; Rev 0.001
cd03891366 cd03891, M20_DapE_proteobac, M20 Peptidase proteob 0.003
PRK09290413 PRK09290, PRK09290, allantoate amidohydrolase; Rev 0.003
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information 
 Score =  641 bits (1655), Expect = 0.0
 Identities = 240/374 (64%), Positives = 298/374 (79%), Gaps = 2/374 (0%)

Query: 52  MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALR 111
           +V IRR+IHENPEL F+E ETS LIR ELD +GIPY++PVA TG+V  IG+G PP VALR
Sbjct: 1   LVRIRREIHENPELAFEEHETSALIRRELDALGIPYRYPVAKTGIVATIGSGSPPVVALR 60

Query: 112 ADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQP 171
           ADMDAL ++E VEWEHKSKV GKMHACGHDAHV MLLGAAK+L+   H +KGT+ L+FQP
Sbjct: 61  ADMDALPIQELVEWEHKSKVDGKMHACGHDAHVTMLLGAAKLLKAREHLLKGTVRLLFQP 120

Query: 172 AEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGG 231
           AEEGG GAK+M+  GAL++VEAIFG+HV    P GTVASRPGP LA  G FEAVI GKGG
Sbjct: 121 AEEGGAGAKEMIKEGALDDVEAIFGMHVDPALPTGTVASRPGPILAGAGRFEAVIRGKGG 180

Query: 232 HAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGG 291
           HAA+P HT+DP++AAS+ +V+LQ LVSRE DPLDSQV++V +F GG AFN+IPDSVT GG
Sbjct: 181 HAAMPHHTVDPVLAASSAVVALQQLVSRETDPLDSQVVSVTRFNGGHAFNVIPDSVTFGG 240

Query: 292 TFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF--DDKSFYPVTVNNKNLHEHFQKV 349
           T RA + E   +L+QRIEEV+  QA+V RCNATV F  D++  YP TVN++ L+EH +KV
Sbjct: 241 TLRALTTEGFYRLRQRIEEVIEGQAAVHRCNATVDFSEDERPPYPPTVNDERLYEHAKKV 300

Query: 350 AADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDA 409
           AAD+LG +N+K   P+MG EDF+F+AE IPG F++LG+ +ET G   + HSPYF ++E+ 
Sbjct: 301 AADLLGPENVKIAPPVMGAEDFAFYAEKIPGAFFFLGIRNETAGSVHSLHSPYFFLDEEV 360

Query: 410 LPYGAALHASLATS 423
           LP GAALHA++A  
Sbjct: 361 LPVGAALHAAVAER 374

Peptidase M20 family, Plant Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase (IAA-Asp hydrolase; IAAspH; IAAH; IAA amidohydrolase; EC 3.5.1.-) subfamily. IAAspH hydrolyzes indole-3-acetyl-N-aspartic acid (IAA or auxin) to indole-3-acetic acid. Genes encoding IAA-amidohydrolases were first cloned from Arabidopsis; ILR1, IAR3, ILL1 and ILL2 encode active IAA- amino acid hydrolases, and three additional amidohydrolase-like genes (ILL3, ILL5, ILL6) have been isolated. In higher plants, the growth regulator indole-3-acetic acid (IAA or auxin) is found both free and conjugated via amide bonding to a variety of amino acids and peptides, and via an ester linkage to carbohydrates. IAA-Asp conjugates are involved in homeostatic control, protection, storing and subsequent use of free IAA. IAA-Asp is also found in some plants as a unique intermediate for entering into IAA non-decarboxylative oxidative pathway. IAA amidohydrolase cleaves the amide bond between the auxin and the conjugated amino acid. Enterobacter agglomerans IAAspH has very strong enzyme activity and substrate specificity towards IAA-Asp, although its substrate affinity is weaker compared to Arabidopsis enzymes of the ILR1 gene family. Enhanced IAA-hydrolase activity has been observed during clubroot disease in Chinese cabbage. Length = 377
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193545 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2 Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193565 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoacylase 1 amhX_like subfamily Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|193541 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea Back     alignment and domain information
>gnl|CDD|193544 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193508 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193547 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacylase 1-like protein 2-like, amidohydrolase subfamily Back     alignment and domain information
>gnl|CDD|193573 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|193548 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|193558 cd05683, M20_peptT_like, M20 Peptidase T like enzymes specifically cleave tripeptides Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information
>gnl|CDD|236323 PRK08651, PRK08651, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|233632 TIGR01910, DapE-ArgE, acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|193506 cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme Back     alignment and domain information
>gnl|CDD|193516 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins Back     alignment and domain information
>gnl|CDD|162579 TIGR01883, PepT-like, peptidase T-like protein Back     alignment and domain information
>gnl|CDD|130947 TIGR01892, AcOrn-deacetyl, acetylornithine deacetylase (ArgE) Back     alignment and domain information
>gnl|CDD|225106 COG2195, PepD, Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|193505 cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase Back     alignment and domain information
>gnl|CDD|181490 PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>gnl|CDD|193494 cd02697, M20_like, M20 Zn-peptidases include exopeptidases Back     alignment and domain information
>gnl|CDD|193514 cd03894, M20_ArgE, M20 Peptidase acetylornithine deacetylase Back     alignment and domain information
>gnl|CDD|233628 TIGR01900, dapE-gram_pos, succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>gnl|CDD|193560 cd08012, M20_ArgE-related, M20 Peptidases with simlarity to acetylornithine deacetylases Back     alignment and domain information
>gnl|CDD|235995 PRK07338, PRK07338, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|236039 PRK07522, PRK07522, acetylornithine deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|200138 TIGR01879, hydantase, amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>gnl|CDD|237250 PRK12893, PRK12893, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|193511 cd03891, M20_DapE_proteobac, M20 Peptidase proteobacterial DapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase Back     alignment and domain information
>gnl|CDD|236456 PRK09290, PRK09290, allantoate amidohydrolase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 423
PLN02280478 IAA-amino acid hydrolase 100.0
PLN02693437 IAA-amino acid hydrolase 100.0
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PRK06915422 acetylornithine deacetylase; Validated 100.0
TIGR01891363 amidohydrolases amidohydrolase. This model represe 100.0
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK06133410 glutamate carboxypeptidase; Reviewed 100.0
PRK13983400 diaminopimelate aminotransferase; Provisional 100.0
PRK06837427 acetylornithine deacetylase; Provisional 100.0
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 100.0
PRK07338402 hypothetical protein; Provisional 100.0
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK13004399 peptidase; Reviewed 100.0
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 100.0
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 100.0
PRK08596421 acetylornithine deacetylase; Validated 100.0
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 100.0
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 100.0
PRK05111383 acetylornithine deacetylase; Provisional 100.0
PRK07522385 acetylornithine deacetylase; Provisional 100.0
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 100.0
PRK09133472 hypothetical protein; Provisional 100.0
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
PRK08201456 hypothetical protein; Provisional 100.0
PRK06446436 hypothetical protein; Provisional 100.0
PRK08652347 acetylornithine deacetylase; Provisional 100.0
PRK08262486 hypothetical protein; Provisional 100.0
PRK07473376 carboxypeptidase; Provisional 100.0
PRK09104464 hypothetical protein; Validated 100.0
PRK07907449 hypothetical protein; Provisional 100.0
PRK00466346 acetyl-lysine deacetylase; Validated 100.0
PRK04443348 acetyl-lysine deacetylase; Provisional 100.0
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 100.0
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 100.0
TIGR01883361 PepT-like peptidase T-like protein. This model rep 100.0
PRK08737364 acetylornithine deacetylase; Provisional 100.0
PRK07906426 hypothetical protein; Provisional 100.0
PRK13381404 peptidase T; Provisional 100.0
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 100.0
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 100.0
PRK07079469 hypothetical protein; Provisional 100.0
PRK06156520 hypothetical protein; Provisional 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 100.0
PRK05469408 peptidase T; Provisional 100.0
PRK07318466 dipeptidase PepV; Reviewed 100.0
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 100.0
PRK09290413 allantoate amidohydrolase; Reviewed 100.0
TIGR01882410 peptidase-T peptidase T. This model represents a t 100.0
PRK07205444 hypothetical protein; Provisional 100.0
PRK12891414 allantoate amidohydrolase; Reviewed 100.0
PRK12890414 allantoate amidohydrolase; Reviewed 100.0
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 100.0
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 100.0
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 100.0
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 100.0
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 100.0
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 100.0
PRK08554438 peptidase; Reviewed 100.0
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 100.0
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 100.0
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 100.0
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.93
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.88
COG4187 553 RocB Arginine degradation protein (predicted deacy 99.81
PRK09961344 exoaminopeptidase; Provisional 99.75
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.75
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.74
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.72
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 99.72
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.72
PRK09864356 putative peptidase; Provisional 99.67
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 98.87
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 98.57
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 98.27
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 97.83
KOG2526555 consensus Predicted aminopeptidases - M20/M25/M40 97.01
COG2234435 Iap Predicted aminopeptidases [General function pr 96.75
KOG2195702 consensus Transferrin receptor and related protein 96.29
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 95.94
PF00883311 Peptidase_M17: Cytosol aminopeptidase family, cata 94.61
PRK00913483 multifunctional aminopeptidase A; Provisional 94.51
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 93.97
PTZ00412569 leucyl aminopeptidase; Provisional 92.1
PRK02256462 putative aminopeptidase 1; Provisional 91.75
PRK05015424 aminopeptidase B; Provisional 91.74
KOG2597513 consensus Predicted aminopeptidase of the M17 fami 91.48
PRK02813428 putative aminopeptidase 2; Provisional 88.32
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 86.39
PTZ00371465 aspartyl aminopeptidase; Provisional 84.38
COG0260485 PepB Leucyl aminopeptidase [Amino acid transport a 83.63
PF0717295 GRP: Glycine rich protein family; InterPro: IPR010 81.25
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information 
Probab=100.00  E-value=6.7e-62  Score=487.57  Aligned_cols=376  Identities=59%  Similarity=1.016  Sum_probs=333.1

Q ss_pred             hhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccCcCCCCCc
Q 014490           47 EIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE  126 (423)
Q Consensus        47 ~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~  126 (423)
                      +.++.+.++.++++++|+++++|.++++||.++|+++|++++....++|++++++++++|+|+|.|||||||+++..+|+
T Consensus        94 ~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~  173 (478)
T PLN02280         94 DTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWE  173 (478)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCC
Confidence            44578889999999999999999999999999999999998876678899999954445999999999999998888899


Q ss_pred             ccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeeccCCCCCCc
Q 014490          127 HKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVG  206 (423)
Q Consensus       127 ~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~~~~~p~g  206 (423)
                      ++.+++|++||||+|++++++|+|+++|++.+.+++++|.|+|+++||.+.|+++++++|.+++.|+++++|+.+.+|.+
T Consensus       174 ~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g  253 (478)
T PLN02280        174 HKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTA  253 (478)
T ss_pred             CCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCc
Confidence            99999999999999999999999999999887778999999999999955699999999988888999999987777888


Q ss_pred             eEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCCCccCCCc
Q 014490          207 TVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDS  286 (423)
Q Consensus       207 ~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~~n~iP~~  286 (423)
                      .+..+.+...+|..+++|+++|+++|++.|+.|+|||..+++++..|+.+..+..++....+++++.|+||...|+||++
T Consensus       254 ~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~  333 (478)
T PLN02280        254 VIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDT  333 (478)
T ss_pred             eeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCE
Confidence            88878788888999999999999999999999999999999999999998766555556789999999999999999999


Q ss_pred             EEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeec--cCCCCccccCHHHHHHHHHHHHHhcCCcccccCCC
Q 014490          287 VTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDD--KSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRP  364 (423)
Q Consensus       287 a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~~~~~~  364 (423)
                      |++.+|+|++|.++.+++.++|++++++.+..+++++++++..  ...++++.+++++++.+++++.+.+|.+.+....+
T Consensus       334 ~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~  413 (478)
T PLN02280        334 VVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPP  413 (478)
T ss_pred             EEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCC
Confidence            9999999999999999999999999999888888877776521  24578888899999999999888777653322235


Q ss_pred             CCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490          365 LMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT  422 (423)
Q Consensus       365 ~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~  422 (423)
                      .+|++|+++|.+.+|++++++|+.+.+||+...+|+++|++++++|..++++|+.++.
T Consensus       414 ~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~  471 (478)
T PLN02280        414 MMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAE  471 (478)
T ss_pred             CeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence            6899999999988999999889876556776789999999999999999999999875

>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only] Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query423
1xmb_A418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-156
1ysj_A404 Crystal Structure Of Bacillus Subtilis Yxep Protein 4e-68
4ewt_A392 The Crystal Structure Of A Putative Aminohydrolase 6e-53
3io1_A445 Crystal Structure Of Aminobenzoyl-Glutamate Utiliza 4e-16
3ram_A394 Crystal Structure Of Hmra Length = 394 6e-13
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  547 bits (1409), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 256/394 (64%), Positives = 318/394 (80%), Gaps = 5/394 (1%)
Query: 30  EELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF 89
           E+ +QI  K L+FAK PE+F WMV IRRKIHENPELG++E ETSKLIR+EL+ +GI Y++
Sbjct: 8   EDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRY 67
Query: 90  PVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLG 149
           PVA+TGV+GYIGTG+PPFVALRADMDAL ++E VEWEHKSK+ GKMHACGHD HV MLLG
Sbjct: 68  PVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLG 127
Query: 150 AAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVA 209
           AAK+L   RH ++GT+VL+FQPAEEG  GAKKM + GAL+NVEAIFG+H+S+  P G  A
Sbjct: 128 AAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAA 187
Query: 210 SRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVL 269
           SR G  LA  G FEAVI GKGGHAAIPQHTIDP+VAAS++++SLQ LVSRE DPLDS+V+
Sbjct: 188 SRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVV 247
Query: 270 TVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTF-- 327
           TV+K  GG AFN+IPDS+TIGGT RAF+     QL+QR++EV+ KQA+V RCNA+V    
Sbjct: 248 TVSKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTP 305
Query: 328 DDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGM 387
           + +   P TVNNK+L++ F+KV  D+LG +   E  P+MG+EDFS+FAE IPG+F  LGM
Sbjct: 306 NGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGM 365
Query: 388 NDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421
            DET G + + HSP +R+NED LPYGAA+HAS+A
Sbjct: 366 QDETNG-YASSHSPLYRINEDVLPYGAAIHASMA 398
>pdb|1YSJ|A Chain A, Crystal Structure Of Bacillus Subtilis Yxep Protein (Apc1829), A Dinuclear Metal Binding Peptidase From M20 Family Length = 404 Back     alignment and structure
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From Methicillin Resistant Staphylococcus Aureus Length = 392 Back     alignment and structure
>pdb|3IO1|A Chain A, Crystal Structure Of Aminobenzoyl-Glutamate Utilization Protein From Klebsiella Pneumoniae Length = 445 Back     alignment and structure
>pdb|3RAM|A Chain A, Crystal Structure Of Hmra Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query423
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 0.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 0.0
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 1e-151
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 3e-39
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 2e-22
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 7e-13
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 1e-12
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 7e-12
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 3e-11
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 1e-10
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 2e-10
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 3e-10
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 8e-10
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 6e-09
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 2e-08
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 6e-07
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 1e-06
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
 Score =  607 bits (1567), Expect = 0.0
 Identities = 257/401 (64%), Positives = 318/401 (79%), Gaps = 5/401 (1%)

Query: 23  SDVSLSPEELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQ 82
           S+     E+ +QI  K L+FAK PE+F WMV IRRKIHENPELG++E ETSKLIR+EL+ 
Sbjct: 1   SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL 60

Query: 83  MGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDA 142
           +GI Y++PVA+TGV+GYIGTG+PPFVALRADMDAL ++E VEWEHKSK+ GKMHACGHD 
Sbjct: 61  IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120

Query: 143 HVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSL 202
           HV MLLGAAK+L   RH ++GT+VL+FQPAEEG  GAKKM + GAL+NVEAIFG+H+S+ 
Sbjct: 121 HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR 180

Query: 203 FPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD 262
            P G  ASR G  LA  G FEAVI GKGGHAAIPQHTIDP+VAAS++++SLQ LVSRE D
Sbjct: 181 IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD 240

Query: 263 PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCN 322
           PLDS+V+TV+K  GG AFN+IPDS+TIGGT RAF+     QL+QR++EV+ KQA+V RCN
Sbjct: 241 PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRVKEVITKQAAVHRCN 298

Query: 323 ATVTF--DDKSFYPVTVNNKNLHEHFQKVAADMLGVQNIKENRPLMGTEDFSFFAEAIPG 380
           A+V    + +   P TVNNK+L++ F+KV  D+LG +   E  P+MG+EDFS+FAE IPG
Sbjct: 299 ASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPG 358

Query: 381 YFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLA 421
           +F  LGM DET G     HSP +R+NED LPYGAA+HAS+A
Sbjct: 359 HFSLLGMQDETNGYAS-SHSPLYRINEDVLPYGAAIHASMA 398
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Length = 394 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Length = 433 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Length = 417 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Length = 434 Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Length = 364 Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Length = 490 Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Length = 369 Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Length = 377 Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Length = 487 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query423
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 100.0
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 100.0
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 100.0
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 100.0
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 100.0
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 100.0
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 100.0
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 100.0
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 100.0
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 100.0
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 100.0
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 100.0
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 100.0
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 100.0
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 100.0
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 100.0
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 100.0
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 100.0
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 100.0
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 100.0
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 99.94
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 99.93
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 99.91
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 99.91
2wzn_A354 TET3, 354AA long hypothetical operon protein FRV; 99.91
2gre_A349 Deblocking aminopeptidase; structural genomi prote 99.89
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.88
1vho_A346 Endoglucanase; structural genomics, unknown functi 99.87
3cpx_A321 Aminopeptidase, M42 family; YP_676701.1, putative 99.85
1ylo_A348 Hypothetical protein SF2450; structural genomics, 99.85
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.76
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.73
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.71
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 99.67
3isx_A343 Endoglucanase; TM1050, structural genomics, joint 99.64
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.64
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.62
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.53
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 99.39
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 99.34
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 99.28
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 99.27
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 99.0
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 98.82
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 98.8
3kas_A640 Transferrin receptor protein 1; transferrin recept 98.19
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 98.15
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 94.4
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 93.74
3vat_A496 Dnpep, aspartyl aminopeptidase; alpha-beta-alpha s 93.71
3k9t_A435 Putative peptidase; structural genomics, joint cen 93.4
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 92.8
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 91.43
4eme_A571 M18 aspartyl aminopeptidase; dnpep/M18/aminopeptid 90.29
2glj_A461 Probable M18-family aminopeptidase 1; aminopeptida 89.55
3h8g_F497 Cytosol aminopeptidase; hydrolase, manganese, meta 87.86
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 87.43
3jru_B490 Probable cytosol aminopeptidase; bacterial blight, 87.31
1lam_A484 Leucine aminopeptidase; exopeptidase, metallopepti 87.12
3pei_A486 Cytosol aminopeptidase; structural genomics, cente 85.94
4efd_A522 Aminopeptidase; structural genomics, structural ge 84.65
2ijz_A428 Probable M18-family aminopeptidase 2; putative ami 84.0
3kzw_A515 Cytosol aminopeptidase; hydrolase, manganese bindi 83.75
3ij3_A482 Cytosol aminopeptidase; PEPB, peptidase M17 family 83.67
2glf_A450 Probable M18-family aminopeptidase 1; putative, NY 83.46
1y7e_A458 Probable M18-family aminopeptidase 1; aminopeptida 82.53
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
Probab=100.00  E-value=9.2e-61  Score=476.82  Aligned_cols=382  Identities=66%  Similarity=1.108  Sum_probs=313.9

Q ss_pred             chHHHHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecc
Q 014490           36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMD  115 (423)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~D  115 (423)
                      .+++.++++.+++++++++++++|++|||+|++|.++++||.++|+++|++++....++|+++++++++.|+|+|.||||
T Consensus        14 ~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~D   93 (418)
T 1xmb_A           14 QTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMD   93 (418)
T ss_dssp             --CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECC
T ss_pred             HHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEeccc
Confidence            34566666664333789999999999999999999999999999999999988765578999999654228999999999


Q ss_pred             cccCcCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceee
Q 014490          116 ALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIF  195 (423)
Q Consensus       116 tvp~~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i  195 (423)
                      |||.+++..|+|..++||++||||+|++++++|+|+++|++.+..++++|.|+|+++|||+.|++.+++++.++++|+++
T Consensus        94 ~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~i  173 (418)
T 1xmb_A           94 ALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIF  173 (418)
T ss_dssp             CBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEE
T ss_pred             ccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEEE
Confidence            99999888899988889999999999999999999999999887899999999999999879999999988776789999


Q ss_pred             eeccCCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEe
Q 014490          196 GLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFE  275 (423)
Q Consensus       196 ~~~~~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~  275 (423)
                      ++|.++++|+|.+..+.+.+++|..+++|+++|+++|+|.|+.|+|||..+++++.+|+.+..+..++...++++++.|+
T Consensus       174 ~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i~  253 (418)
T 1xmb_A          174 GIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN  253 (418)
T ss_dssp             EEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEEC
T ss_pred             EEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEE
Confidence            98877767888766666777889999999999999999999999999999999999999876554455556799999999


Q ss_pred             cCCCCccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCC----CCccccCHHHHHHHHHHHH
Q 014490          276 GGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSF----YPVTVNNKNLHEHFQKVAA  351 (423)
Q Consensus       276 gg~~~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~l~~~~~  351 (423)
                      ||.+.|+||++|++.+|+|+.|  +.+++.++|++++++.+..+++++++++  ...    ++++.+|+++++.++++++
T Consensus       254 gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~--~~~~~~p~~~~~~d~~l~~~~~~~~~  329 (418)
T 1xmb_A          254 GGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNL--TPNGREPMPPTVNNKDLYKQFKKVVR  329 (418)
T ss_dssp             --------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEES--SGGGCCCBCCEEECHHHHHHHHHHHH
T ss_pred             ecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEE--ccCCcccCCCccCCHHHHHHHHHHHH
Confidence            9999999999999999999999  8999999999999998888888888876  344    7778889999999999999


Q ss_pred             HhcCCcccccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490          352 DMLGVQNIKENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT  422 (423)
Q Consensus       352 ~~~g~~~~~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~  422 (423)
                      +++|.+++......+|++|+++|.+.+|++++++|+.+.+ |....+|++||++++++|.+++++|+.++.
T Consensus       330 ~~~g~~~~~~~~~~~g~tD~~~~~~~~P~~~~~~G~~~~~-~~~~~~H~~~E~i~~~~l~~~~~~~~~~~~  399 (418)
T 1xmb_A          330 DLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAV  399 (418)
T ss_dssp             HHHCGGGEEECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHH
T ss_pred             HhcCCcceeccCCCCCcchHHHHHHHCCEEEEEEeCCCCC-CCCCCCCCCCCccCHHHHHHHHHHHHHHHH
Confidence            9779864322457889999999988899877667755411 224679999999999999999999998875
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A* Back     alignment and structure
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Back     alignment and structure
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7} Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A* Back     alignment and structure
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Back     alignment and structure
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV} Back     alignment and structure
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Back     alignment and structure
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp} Back     alignment and structure
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei} Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp} Back     alignment and structure
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 423
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 3e-58
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 3e-16
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 8e-46
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 1e-11
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 1e-25
d1lfwa2196 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactoba 4e-20
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 1e-18
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 7e-16
d1vgya2113 d.58.19.1 (A:181-293) Succinyl-diaminopimelate des 1e-15
d1cg2a2113 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudom 2e-14
d1z2la2117 d.58.19.1 (A:213-329) Allantoate amidohydrolase Al 2e-14
d1r3na2116 d.58.19.1 (A:248-363) Peptidase-like beta-alanine 8e-13
d1vgya1262 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimel 2e-08
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  190 bits (482), Expect = 3e-58
 Identities = 137/267 (51%), Positives = 173/267 (64%), Gaps = 15/267 (5%)

Query: 38  KFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVV 97
           K L+FAK PE+F WMV IRRKIHENPELG++E ETSKLIR+EL+ +GI Y++PVA+TGV+
Sbjct: 1   KLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVI 60

Query: 98  GYIGTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVF 157
           GYIGTG+PPFVALRADMDAL ++E VEWEHKSK+ GKMHACGHD HV MLLGAAK+L   
Sbjct: 61  GYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 120

Query: 158 RHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLA 217
           RH ++GT+VL+FQPAEEG  GAKKM + GAL+NVEAIFG+H+S+  P G  ASR G  L 
Sbjct: 121 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLT 180

Query: 218 AGGFFEAVINGKGGHAAIPQ---HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274
                      K     + Q       P++ + +     + +      P    +L +   
Sbjct: 181 VNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETI------PGHFSLLGMQDE 234

Query: 275 EGGGA------FNIIPDSVTIGGTFRA 295
             G A      + I  D +  G    A
Sbjct: 235 TNGYASSHSPLYRINEDVLPYGAAIHA 261
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 196 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Length = 113 Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 113 Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 116 Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Length = 262 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query423
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 100.0
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 100.0
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.97
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.97
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.93
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.9
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.89
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.87
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.87
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.86
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.85
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.83
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.83
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.82
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.78
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.75
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.73
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.72
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.68
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 99.53
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.49
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 99.48
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.44
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 99.22
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 99.21
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 99.16
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.06
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.06
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 97.85
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 97.81
d1lama1325 Leucine aminopeptidase, C-terminal domain {Cow (Bo 91.48
d1gyta2325 Leucine aminopeptidase, C-terminal domain {Escheri 90.38
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.4e-36  Score=273.92  Aligned_cols=263  Identities=66%  Similarity=1.139  Sum_probs=199.9

Q ss_pred             HHhhcCchhHHHHHHHHHHhHhCCCCCCCcHHHHHHHHHHHHhCCCCeEecccCceEEEEECCCCCcEEEEEEecccccC
Q 014490           40 LDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM  119 (423)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~l~~ips~s~~E~~~~~~l~~~l~~~g~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~  119 (423)
                      +++.+..++.++++++.|+|+++|++|++|.++++||.++|+++|++++.....+.+++.++++++|+|+|.++||.+|.
T Consensus         3 ~~~~~~~e~~~~li~~rr~lh~~PEl~~~E~~T~~~i~~~L~~~g~~~~~~~~~tg~~a~~~~~~~~~i~~rad~Dalp~   82 (273)
T d1xmba1           3 LEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPI   82 (273)
T ss_dssp             -------------------HHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECCCBSC
T ss_pred             hhhhhChHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHHCCCeEEecCCceEEEEEECCCcceEEEEecccccccc
Confidence            34444444568999999999999999999999999999999999999988677789999998777799999999999999


Q ss_pred             cCCCCCcccCCCCCccccCCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHhcCCCcccceeeeecc
Q 014490          120 EESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHV  199 (423)
Q Consensus       120 ~~~~~w~~~~~~~g~~~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~Ga~~~~~~~~~~~~d~~i~~~~  199 (423)
                      .+...|+|.+..+|.+|+||++++++++|++++.|++....++++|+|+|+++||++.|++.|+++|.++++|+++.+|+
T Consensus        83 ~e~~~~~~~s~~~g~~HaCGHd~h~a~~l~aa~~l~~~~~~~~g~v~~ifqPaEE~~~Ga~~mi~~G~~~~vd~~~~~H~  162 (273)
T d1xmba1          83 QEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHL  162 (273)
T ss_dssp             CCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEEEEEEE
T ss_pred             ccccCcccccCCCCcccccccchHHHHHHHHHHHHHHhhhcCCCeEEEEEecccccccchhHHHHcCCcCCCCeeEEEee
Confidence            99999999999999999999999999999999999998878999999999999998889999999999999999999999


Q ss_pred             CCCCCCceEEeecCcccCcceEEEEEEEeCCCCCCCCCCCCcHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEecCCC
Q 014490          200 SSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGA  279 (423)
Q Consensus       200 ~~~~p~g~~~~~~g~~~~g~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~t~~v~~i~gg~~  279 (423)
                      ++..|.|++.++.|....                                                              
T Consensus       163 ~~~~~~G~i~~~~G~~ma--------------------------------------------------------------  180 (273)
T d1xmba1         163 SARIPFGKAASRAGSFLT--------------------------------------------------------------  180 (273)
T ss_dssp             EEEEETTCEEECSEEEEE--------------------------------------------------------------
T ss_pred             cCCCCcchhhcccchhhh--------------------------------------------------------------
Confidence            888888887766432110                                                              


Q ss_pred             CccCCCcEEEEEEEecCChhhHHHHHHHHHHHHHHHHHhcCCeEEEEeeccCCCCccccCHHHHHHHHHHHHHhcCCccc
Q 014490          280 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVVMKQASVQRCNATVTFDDKSFYPVTVNNKNLHEHFQKVAADMLGVQNI  359 (423)
Q Consensus       280 ~n~iP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~g~~~~  359 (423)
                                                                               .+|...++.+.++.++.+|.+.+
T Consensus       181 ---------------------------------------------------------~nd~~~~~~~~~~a~~~~G~~av  203 (273)
T d1xmba1         181 ---------------------------------------------------------VNNKDLYKQFKKVVRDLLGQEAF  203 (273)
T ss_dssp             ---------------------------------------------------------------------------ECGGE
T ss_pred             ---------------------------------------------------------hhhhHhHHHHHHHHHHHhccccc
Confidence                                                                     00111222233344444455554


Q ss_pred             ccCCCCCCCchHHHHHhhcCeEEEEeccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHHh
Q 014490          360 KENRPLMGTEDFSFFAEAIPGYFYYLGMNDETKGKFETGHSPYFRVNEDALPYGAALHASLAT  422 (423)
Q Consensus       360 ~~~~~~~g~tD~~~~~~~ip~~~~~~g~~~~~pg~~~~~H~~~E~i~~~~l~~~~~~~~~~i~  422 (423)
                      ....+..|+.|+++|.+.+|..++.+|..+.. ......|+|...++.+.|..++++++.+++
T Consensus       204 ~~~~P~mgsEDFs~~~~~vPg~~~~lG~~~~~-~g~~~~Hsp~F~idE~aL~~Gv~~~~~~Al  265 (273)
T d1xmba1         204 VEAAPVMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHASMAV  265 (273)
T ss_dssp             EECCCBCCCCTHHHHHTTSCEEEEEEEEECTT-CCSCCTTCTTCCCCGGGHHHHHHHHHHHHH
T ss_pred             cccCchhhHHHHHHHHHhCCceEEEEccccCC-CCCcCCCCCCccCCHHHHHHHHHHHHHHHH
Confidence            44557889999999999999988888876542 234568999999999999999999998875
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Back     information, alignment and structure