Citrus Sinensis ID: 014492

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420---
Protein Sequence
MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Secondary Structure (PSIPRED)
ccEEEccccccEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHccccccccccccHHHHHHHHccccccEEEcccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHccccccEEEEccccccccHHHHHHcccEEEEEEccccccccHHHHHHHHccccccEEEEccccccccccccHHHHHcHHccccEEEEEcccccccccccHHHHHHccccEEEEcccHHHHHHHHHHHHHccccHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccHHHHHHHHHHcccEEcccccccccccEEEEcccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccccccccccccccccccccccHHcccccEEEEccccccccHHHHHcccccHHHHHHHHHHHcccccccHHHHHHHHHHccccccEEEEccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHcccHcHEEEcccHHHHHHHHHHHHcccccEEEEccccEEEcHHHHHHcccEEEEEEccccccccHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHccccEEEEEcccHHHcHHHccHHHHHHcccEEEEEEcccccccHHHccEEEEEcHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccHHHHHHHHHHcccEEEcccccccccEEEEEEccHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mgvietssssslcllksnfsshpfvvpnrtvcpfqgnqrrviamsstlpveqqvnegqrrltgDSFIRSHLrklkpyqpilpfevlsiqlgrkpedivkidanenpygpppevrealgqlkfpyiypdpesRRLRAALAKdsglesdhilvGCGADELIDLIMRCvldpgdkivdcpptftmyefdaavngaavvkvprksdfsLNVELIADAVErekpkcifltspnnpdgsiindeDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWrakqpynvSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLkdvpflnpypsysnfilcevtsgmdakKLKDDLAKMGVMIRHYnnkelkgyvrvsvgkpehTDALMECLMHLY
Flexible Loop (DISEMBL)
mgvietssssslCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMsstlpveqqvnegqrrltGDSFIRSHLrklkpyqpilpFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCifltspnnpdgsiINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKdvpflnpypsYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHynnkelkgyvrvSVGKPEHTDALMECLMHLY
Low Complexity Region (SEG)
MGVIETssssslcllksnfssHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNvsvaaevaacaaLQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMdakklkddlakMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Disordered region (IsUnstruct)
***********LCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAM*****************TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKI***************ALGQLKFPYIYP**********L****GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY*********************LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL****
Disordered Region (DISOPRED)
*GV****SSSSLCLLKSNFSSHPFVVP**TVCP*******************************SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Disordered Region (DISEMBL)
**********SLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Disordered Region (DISPRO)
MGVIETSSSSSLCLLKSNFSS*PFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	423	2.2.26 [Sep-21-2011]
Q9FEW2	413	Histidinol-phosphate amin	N/A	no	0.973	0.997	0.778	0.0
O82030	413	Histidinol-phosphate amin	N/A	no	0.973	0.997	0.773	0.0
P0DI07	417	Histidinol-phosphate amin	yes	no	0.983	0.997	0.754	0.0
B9DHD3	417	Histidinol-phosphate amin	yes	no	0.983	0.997	0.754	0.0
A5V022	370	Histidinol-phosphate amin	yes	no	0.843	0.964	0.478	4e-88
A7NFV2	371	Histidinol-phosphate amin	yes	no	0.836	0.954	0.486	1e-83
Q3Z879	358	Histidinol-phosphate amin	yes	no	0.822	0.972	0.410	2e-73
A5FR29	358	Histidinol-phosphate amin	yes	no	0.773	0.913	0.418	2e-71
Q3ZXL8	358	Histidinol-phosphate amin	yes	no	0.773	0.913	0.418	6e-71
Q58365	373	Histidinol-phosphate amin	yes	no	0.832	0.943	0.385	8e-61

>sp|Q9FEW2|HIS8_NICPL Histidinol-phosphate aminotransferase, chloroplastic OS=Nicotiana plumbaginifolia GN=HPA PE=1 SV=1

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/424 (77%), Positives = 375/424 (88%), Gaps = 12/424 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++N S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRANPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSII+DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIIDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPAYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 420 MHLY 423
            H Y
Sbjct: 410 KHFY 413

Nicotiana plumbaginifolia (taxid: 4092)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 9

>sp|O82030|HIS8_TOBAC Histidinol-phosphate aminotransferase, chloroplastic OS=Nicotiana tabacum GN=HPA PE=2 SV=1

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/424 (77%), Positives = 374/424 (88%), Gaps = 12/424 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++  S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRAKPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSI++DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIVDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPTYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 420 MHLY 423
            H Y
Sbjct: 410 KHFY 413

Nicotiana tabacum (taxid: 4097)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|P0DI07|HIS8B_ARATH Histidinol-phosphate aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=HPA2 PE=2 SV=1

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/424 (75%), Positives = 358/424 (84%), Gaps = 8/424 (1%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE V++AL++ERERLF LLK+VPFLNPY
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDVRDALVRERERLFGLLKEVPFLNPY 353

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILCEVTSGMDAKKLK+DLAKMGVM+RHYN++ELKGYVRVS GKPEHTD LMECL
Sbjct: 354 PSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNSQELKGYVRVSAGKPEHTDVLMECL 413

Query: 420 MHLY 423
              Y
Sbjct: 414 KQFY 417

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|B9DHD3|HIS8A_ARATH Histidinol-phosphate aminotransferase 1, chloroplastic OS=Arabidopsis thaliana GN=HPA1 PE=2 SV=1

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/424 (75%), Positives = 358/424 (84%), Gaps = 8/424 (1%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE V++AL++ERERLF LLK+VPFLNPY
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDVRDALVRERERLFGLLKEVPFLNPY 353

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILCEVTSGMDAKKLK+DLAKMGVM+RHYN++ELKGYVRVS GKPEHTD LMECL
Sbjct: 354 PSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNSQELKGYVRVSAGKPEHTDVLMECL 413

Query: 420 MHLY 423
              Y
Sbjct: 414 KQFY 417

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A5V022|HIS8_ROSS1 Histidinol-phosphate aminotransferase OS=Roseiflexus sp. (strain RS-1) GN=hisC PE=3 SV=1

 Score =  325 bits (833), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 174/364 (47%), Positives = 240/364 (65%), Gaps = 7/364 (1%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLK--F 122
             +R  +  L+PY PI+P E L+ +LG   E I+K+DANENPYGP P    AL  ++   
Sbjct: 7   GLLRPDIAALEPYTPIVPLETLAERLGLPVERIIKLDANENPYGPSPHALAALAAVERDA 66

Query: 123 PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           P+   IYPDP+  RLRAAL++  G   + I+ G G+DELIDL+MR  L PGD ++DCPPT
Sbjct: 67  PHRYAIYPDPDHVRLRAALSRYIGQPPERIICGAGSDELIDLLMRATLRPGDTMIDCPPT 126

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY FDAA+ GA VV VPR   F +++E +A+AVERE  K +FL +PNNP G+ +   D
Sbjct: 127 FAMYSFDAALYGARVVPVPRTDQFDVDIEGVAEAVEREGAKLLFLAAPNNPTGTPLARSD 186

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + ++L++PI++ +DEAY EF+G  S ++ V    NL+VLRTFSK AGLAGLR+GY A   
Sbjct: 187 VERLLDLPIILAIDEAYAEFAG-TSVVDMVGACPNLVVLRTFSKWAGLAGLRIGYAAMHE 245

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
            +  Y+W+ KQPYNV+VAAEVAA A+L +          ++ ERERL   L  +P    Y
Sbjct: 246 DVAAYVWKIKQPYNVNVAAEVAAIASLDDLEERMATVARIVAERERLAAALAALPGFRVY 305

Query: 360 PSYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418
           PS +NF+LC +T G   A+ + D LA+ G++IR++N   L   +R+SVG+PE  DAL+  
Sbjct: 306 PSAANFLLCRITGGAARARTICDGLAQRGILIRYFNRPGLDDCIRISVGRPEQNDALLHA 365

Query: 419 LMHL 422
           L  L
Sbjct: 366 LREL 369

Roseiflexus sp. (strain RS-1) (taxid: 357808)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A7NFV2|HIS8_ROSCS Histidinol-phosphate aminotransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=hisC PE=3 SV=1

 Score =  310 bits (795), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 176/362 (48%), Positives = 245/362 (67%), Gaps = 8/362 (2%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKF-- 122
             +R  +  L+PY PI+P E L+ +LG   E I+K+DANENPYGP P    AL  ++   
Sbjct: 7   GLLRPDIAALEPYTPIVPLETLAERLGLPVERIIKLDANENPYGPSPRALAALAAVEHDA 66

Query: 123 PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           P+   IYPDP+  RLRAAL++  G   + I+ G G+DELIDLIMR VL PGD +VDCPPT
Sbjct: 67  PHRYAIYPDPDHTRLRAALSRYVGQPPERIICGAGSDELIDLIMRAVLRPGDVMVDCPPT 126

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY FDAA+ GA +V VPR   F ++VE +A+AVER+  K +FL +PNNP G+ +    
Sbjct: 127 FAMYSFDAALYGARIVAVPRTEQFDVDVEGVAEAVERDGAKLLFLAAPNNPTGTPLARTT 186

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + ++L++PI++ +DEAY EF+G  S ++ V    NL+VLRTFSK AGLAGLR+GY A   
Sbjct: 187 VERLLDLPIILAIDEAYAEFAG-TSVIDLVGTRPNLVVLRTFSKWAGLAGLRIGYAAMHE 245

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
            +I YLW+ KQPYNV+VAAEVAA A+L +          ++ ERERL   L  +P ++ Y
Sbjct: 246 DVITYLWKIKQPYNVNVAAEVAAVASLDDLDERLSTVARIVAERERLAAALAALPGIHVY 305

Query: 360 PSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 417
           PS +NF+LC +TSG    A+ ++D LA+ G++IR++N   +   +R+SVG+PE  DAL++
Sbjct: 306 PSAANFLLCRMTSGGAARARAIRDTLAQRGILIRYFNRPGIDDCIRISVGRPEQNDALLD 365

Query: 418 CL 419
            L
Sbjct: 366 VL 367

Roseiflexus castenholzii (strain DSM 13941 / HLO8) (taxid: 383372)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q3Z879|HIS8_DEHE1 Histidinol-phosphate aminotransferase OS=Dehalococcoides ethenogenes (strain 195) GN=hisC PE=3 SV=1

 Score =  276 bits (707), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 147/358 (41%), Positives = 227/358 (63%), Gaps = 10/358 (2%)

Query: 66  FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYI 125
           +IR+ L     Y      E++  +       I+K+DANEN YG  P V++A+      +I
Sbjct: 8   YIRTDLEGFAGYSACKAPELVKTK-----NRIIKLDANENLYGAAPTVQKAMSTFDQYHI 62

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD     +R  LA+ +G+  + I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F
Sbjct: 63  YPDATQFEIRRLLAEYTGVNMEQIICGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKF 122

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              +N   VV VPR + + +N+  I +A+   K K IF+ +PNNP G+ I+ ED+ +IL+
Sbjct: 123 YTDLNRGTVVNVPRDAGYDVNIGGIKNALT-PKTKLIFIAAPNNPTGTAISKEDIRQILD 181

Query: 246 MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305
           + +  V+DEAY EF+G ++ +  +  + NL++LRTFSK AGLAGLRVGYG FP  I +YL
Sbjct: 182 LGVPTVIDEAYYEFTG-QTMVTDMPSYPNLMILRTFSKWAGLAGLRVGYGLFPPVIADYL 240

Query: 306 WRAKQPYNVSVAAEVAA-CAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN 364
            R K PY+V++AA+ A     LQ    LE VK+ ++ ER+RL+  L    +L PYPS +N
Sbjct: 241 SRIKDPYSVNIAADAAVRQTMLQREYMLETVKK-IVDERKRLYTELSKFSWLKPYPSAAN 299

Query: 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422
           FILC++  G  AK ++  L   G+++R ++   ++  +R SVGKPE TDAL++ L  +
Sbjct: 300 FILCKLLKG-KAKDVQQALESQGILVRCFDAPMMENCLRFSVGKPEDTDALLKALGEM 356

Dehalococcoides ethenogenes (strain 195) (taxid: 243164)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|A5FR29|HIS8_DEHSB Histidinol-phosphate aminotransferase OS=Dehalococcoides sp. (strain BAV1) GN=hisC PE=3 SV=1

 Score =  270 bits (690), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 221/332 (66%), Gaps = 5/332 (1%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +L +  + I+K+DANEN YG  P VR+A+ +    +IYPD     +R  L++ +G+  + 
Sbjct: 26  ELVKTSKQIIKLDANENLYGAAPTVRQAMSEFNQYHIYPDATQSEIRRLLSEYTGVAVEQ 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   +V VPR + +++N+ 
Sbjct: 86  IVCGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTELNRGKIVNVPRDASYNINIA 145

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
            I       + K IF+ +PNNP G+ I+ E++ +IL++ +  V+DEAY EF+G ++ +  
Sbjct: 146 AIN-NAITPQTKLIFIAAPNNPTGTAISKEEIRQILDLGVPTVVDEAYYEFTG-QTMVSD 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA-CAALQ 327
           + K+ NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+V++AA+ A     LQ
Sbjct: 204 MSKYPNLMILRTFSKWAGLAGLRVGYGLFPPIIADYLSRIKDPYSVNIAADAAVRQTMLQ 263

Query: 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 387
               LE VK+ ++ ER+RL+  L    +L PYPS +NFILC++  G  AK+++ +L   G
Sbjct: 264 REYMLETVKK-IVNERQRLYTELSKFGWLKPYPSVANFILCKLLKG-KAKEVQHELESKG 321

Query: 388 VMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           +++R ++   ++  +R SVGKPE TD L++ L
Sbjct: 322 ILVRCFDAPMMENCLRFSVGKPEDTDGLLKAL 353

Dehalococcoides sp. (strain BAV1) (taxid: 216389)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q3ZXL8|HIS8_DEHSC Histidinol-phosphate aminotransferase OS=Dehalococcoides sp. (strain CBDB1) GN=hisC PE=3 SV=1

 Score =  268 bits (685), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 221/332 (66%), Gaps = 5/332 (1%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +L +  + I+K+DANEN YG  P VR+A+ +    +IYPD     +R  L++ +G+  + 
Sbjct: 26  ELVKTSKLIIKLDANENLYGAAPTVRQAMAEFNQYHIYPDATQSEIRRLLSEYTGVAVEQ 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   +V VPR + +++N+ 
Sbjct: 86  IVCGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTELNRGKIVNVPRDASYNINIA 145

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
            I       + K IF+ +PNNP G+ I+ E++ +IL++ +  V+DEAY EF+G ++ +  
Sbjct: 146 AIN-NAITPQTKLIFIAAPNNPTGTAISKEEIRQILDLGVPTVVDEAYYEFTG-QTMVSD 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA-CAALQ 327
           + K+ NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+V++AA+ A     LQ
Sbjct: 204 MSKYPNLMILRTFSKWAGLAGLRVGYGLFPPIIADYLSRIKDPYSVNIAADAAIRQTMLQ 263

Query: 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG 387
               LE VK+ ++ ER+RL+  L    +L PYPS +NFILC++  G  AK+++ +L   G
Sbjct: 264 REYMLETVKK-IVNERQRLYTELSKFGWLKPYPSVANFILCKLLKG-KAKEVQHELESKG 321

Query: 388 VMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           +++R ++   ++  +R SVGKPE TD L++ L
Sbjct: 322 ILVRCFDAPMMENCLRFSVGKPEDTDGLLKAL 353

Dehalococcoides sp. (strain CBDB1) (taxid: 255470)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

>sp|Q58365|HIS8_METJA Histidinol-phosphate aminotransferase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=hisC PE=3 SV=1

 Score =  234 bits (598), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 224/366 (61%), Gaps = 14/366 (3%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA-LGQLKFPYI 125
           +R  ++KLKPY P    E ++   G KPEDI+K+ +NENP+GP P+++E  L ++   + 
Sbjct: 10  VRDVVKKLKPYVPGKSKEEIARAYGIKPEDIIKLGSNENPWGPSPKIKEKILDEIDKIHQ 69

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGC-GADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YP+P +  L   L+K   ++ ++I+VG  GADE+ID I R  +D GD+++   PTFT Y 
Sbjct: 70  YPEPVNPILMKELSKFLNVDEENIIVGGDGADEIIDTIFRTFVDDGDEVIIPIPTFTQYR 129

Query: 185 FDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
             A ++ A +   K  ++ DF LNVE + + +  +K K IFL +PNNP G+II + D+ +
Sbjct: 130 VSATIHNAKIKYAKYDKEKDFKLNVESVLNNI-TDKTKVIFLCTPNNPTGNIIENRDVER 188

Query: 243 IL-EMPILVVLDEAYTEFSGLESRMEWVKK---HDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           ++ E   LVV+D AY E++  E   +W +K   +DN+IVLRTFSK  GLAG+RVGYG   
Sbjct: 189 VINETDALVVIDHAYIEYAKKE--YDWTQKAPEYDNVIVLRTFSKVFGLAGMRVGYGVAN 246

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP 358
             II+Y+ R K  ++++  ++V A  AL++  + E+     IK RE L+  LK    +  
Sbjct: 247 KKIIDYMMRVKPIFSLTRLSQVCAITALRDREFFERCVRDGIKSREMLYNGLKKFKDIKV 306

Query: 359 YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG--YVRVSVGKPEHTDALM 416
           YPS +N++L E+ + M AK+  ++L K GV++R   + +  G  YVRVS+G  E  +  +
Sbjct: 307 YPSEANYLLVELKT-MKAKEFCEELLKRGVIVRDCTSFDGLGDNYVRVSIGTFEEVERFL 365

Query: 417 ECLMHL 422
           + L  +
Sbjct: 366 KILEEI 371

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
255564464	423	histidinol-phosphate aminotransferase, p	0.997	0.997	0.818	0.0
356559575	424	PREDICTED: histidinol-phosphate aminotra	0.995	0.992	0.785	0.0
359493094	421	PREDICTED: histidinol-phosphate aminotra	0.992	0.997	0.812	0.0
51316088	413	RecName: Full=Histidinol-phosphate amino	0.973	0.997	0.778	0.0
51315816	413	RecName: Full=Histidinol-phosphate amino	0.973	0.997	0.773	0.0
449465360	421	PREDICTED: histidinol-phosphate aminotra	0.976	0.980	0.766	0.0
212275482	417	uncharacterized protein LOC100191987 [Ze	0.936	0.949	0.782	0.0
195640672	417	histidinol-phosphate aminotransferase [Z	0.936	0.949	0.782	0.0
18416245	417	Histidinol-phosphate aminotransferase [A	0.983	0.997	0.754	0.0
449496869	421	PREDICTED: histidinol-phosphate aminotra	0.976	0.980	0.762	0.0

>gi|255564464|ref|XP_002523228.1| histidinol-phosphate aminotransferase, putative [Ricinus communis] gi|223537524|gb|EEF39149.1| histidinol-phosphate aminotransferase, putative [Ricinus communis]

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/424 (81%), Positives = 380/424 (89%), Gaps = 2/424 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQ-GNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI+  +++SLCL+KS+ S H  ++P R +C F+  N+RRVIAM+S  PVE  +NE Q 
Sbjct: 1   MGVIDIYNTASLCLIKSSHSLHQSLLPQRRICSFEVNNRRRVIAMASFTPVEH-INEAQE 59

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
           R+ GDSFIRSHLRKL PYQPILPFEVLS  LGRKPEDIVK+DANENPYGPPPE  EALG 
Sbjct: 60  RVAGDSFIRSHLRKLSPYQPILPFEVLSASLGRKPEDIVKLDANENPYGPPPEATEALGS 119

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           LKFPYIYPDPESRRLR ALAKDS LES+HILVGCGADELIDLIMRC LDPGDKIVDCPPT
Sbjct: 120 LKFPYIYPDPESRRLREALAKDSDLESNHILVGCGADELIDLIMRCTLDPGDKIVDCPPT 179

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KV RK DFSLNVELI DAV REKPKCIFLTSPNNPDGSII+DED
Sbjct: 180 FTMYEFDAAVNGAEVIKVMRKPDFSLNVELIVDAVLREKPKCIFLTSPNNPDGSIISDED 239

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILVVLDEAY EFSGLESRM+WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 240 LLKILQLPILVVLDEAYIEFSGLESRMKWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPS 299

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIEYLWRAKQPYNVSVAAEV+ACAAL+NP YLE VK+AL++ERERL+KLLK+VPFL P+
Sbjct: 300 SIIEYLWRAKQPYNVSVAAEVSACAALENPTYLETVKDALVQERERLYKLLKEVPFLTPF 359

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILCEV SG DAKKLKDDLAKMGVM+RHYNNK LKGY+R+SVGKPE TD LM+CL
Sbjct: 360 PSYSNFILCEVKSGRDAKKLKDDLAKMGVMVRHYNNKVLKGYIRISVGKPEQTDVLMKCL 419

Query: 420 MHLY 423
             LY
Sbjct: 420 KTLY 423

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559575|ref|XP_003548074.1| PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Glycine max]

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/424 (78%), Positives = 377/424 (88%), Gaps = 3/424 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFV-VPNRTVCPFQGN-QRRVIAMSSTLPVEQQVNEGQ 58
           MGVI+  ++ +LC +KSN +    V +  R +C F+GN QR+ +AM+ST+PVEQ VN G 
Sbjct: 1   MGVIDFYNTGALCWVKSNANLKQQVGLAPRPICSFEGNNQRKFVAMASTVPVEQ-VNNGP 59

Query: 59  RRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALG 118
            ++TGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG
Sbjct: 60  LQVTGDSFIREHLRKLAPYQPILPFEVLSARLGRKPEDIVKLDANENPYGPPPEVMEALG 119

Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
            ++FPY+YPDPESRRLRAALA DSGLE+++IL GCGADELIDLIMRCVLDPGDKIVDCPP
Sbjct: 120 SMQFPYVYPDPESRRLRAALAHDSGLEAEYILAGCGADELIDLIMRCVLDPGDKIVDCPP 179

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           TFTMYEFDAAVNGA V+KVPR+ DFSLNVE IA+ V++EKPKCIFLTSPNNPDGSII+DE
Sbjct: 180 TFTMYEFDAAVNGALVIKVPRRPDFSLNVEQIAEVVKQEKPKCIFLTSPNNPDGSIIDDE 239

Query: 239 DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
            LLKILE+PILV+LDEAY EFS +ESRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP
Sbjct: 240 VLLKILELPILVILDEAYIEFSAIESRMSWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 299

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP 358
           LSIIEYLWRAKQPYNVSVAAE++ACAALQNP YLE VK AL+KER RL+ LLK+VPFL P
Sbjct: 300 LSIIEYLWRAKQPYNVSVAAEISACAALQNPTYLENVKNALLKERGRLYDLLKEVPFLRP 359

Query: 359 YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418
           +PS+SNFILCEVTSG DAKKLK+DLA+MGVMIRHY+ KELKGYVRV+VGKPE TD LM+C
Sbjct: 360 FPSHSNFILCEVTSGKDAKKLKEDLAQMGVMIRHYDKKELKGYVRVTVGKPEQTDTLMKC 419

Query: 419 LMHL 422
           L  L
Sbjct: 420 LKRL 423

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493094|ref|XP_003634508.1| PREDICTED: histidinol-phosphate aminotransferase, chloroplastic-like [Vitis vinifera]

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/422 (81%), Positives = 375/422 (88%), Gaps = 2/422 (0%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQVNEGQRR 60
           MGVI     SSLC++K N   H  + P   +C F+G ++ V  M+S +PV +Q +E Q R
Sbjct: 1   MGVINIYDISSLCVVKHNTDIH-LLEPRAPICSFEGRRKGVTCMTSAMPV-KQASEVQER 58

Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           LTGDSFIR HL+ L PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG L
Sbjct: 59  LTGDSFIRPHLKNLSPYQPILPFEVLSSRLGRKPEDIVKLDANENPYGPPPEVFEALGSL 118

Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180
           KFPY+YPDPESRRLR ALA+DSG+ESD+IL GCGADELIDLIMRCVLDPGDKIVDCPPTF
Sbjct: 119 KFPYVYPDPESRRLRGALAEDSGIESDYILAGCGADELIDLIMRCVLDPGDKIVDCPPTF 178

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
           TMYEFDAAVNGA V+KVPR SDFSLN+E IAD VE+EKPKCIFLTSPNNPDGSIINDE L
Sbjct: 179 TMYEFDAAVNGALVLKVPRNSDFSLNLEAIADVVEKEKPKCIFLTSPNNPDGSIINDEIL 238

Query: 241 LKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           LKILE+PILVVLDEAY EFSG++SRM WVKK +NLIVLRTFSKRAGLAGLRVGYGAFPLS
Sbjct: 239 LKILELPILVVLDEAYIEFSGIKSRMGWVKKFENLIVLRTFSKRAGLAGLRVGYGAFPLS 298

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP 360
           IIEYLWRAKQPYNVSVAAEV+ACAALQNP YLEKVKEAL++ER RL+KLLK+VPFLNP+P
Sbjct: 299 IIEYLWRAKQPYNVSVAAEVSACAALQNPAYLEKVKEALVQERGRLYKLLKEVPFLNPFP 358

Query: 361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM 420
           SYSNFILCEVTSGMDAKKLKDDLAK GVMIRHY+NKELKGYVRVSVGKPEHTDALM CL 
Sbjct: 359 SYSNFILCEVTSGMDAKKLKDDLAKKGVMIRHYSNKELKGYVRVSVGKPEHTDALMACLN 418

Query: 421 HL 422
            L
Sbjct: 419 SL 420

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51316088|sp|Q9FEW2.1|HIS8_NICPL RecName: Full=Histidinol-phosphate aminotransferase, chloroplastic; AltName: Full=Imidazole acetol-phosphate transaminase; Flags: Precursor gi|12055099|emb|CAC20728.1| histidinol phosphate aminotransferase [Nicotiana plumbaginifolia]

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/424 (77%), Positives = 375/424 (88%), Gaps = 12/424 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++N S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRANPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSII+DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIIDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPAYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 420 MHLY 423
            H Y
Sbjct: 410 KHFY 413

Source: Nicotiana plumbaginifolia

Species: Nicotiana plumbaginifolia

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51315816|sp|O82030.1|HIS8_TOBAC RecName: Full=Histidinol-phosphate aminotransferase, chloroplastic; AltName: Full=Imidazole acetol-phosphate transaminase; Flags: Precursor gi|3355626|emb|CAA70403.1| histidinol-phosphate aminotransferase [Nicotiana tabacum]

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/424 (77%), Positives = 374/424 (88%), Gaps = 12/424 (2%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVCPFQGNQRR-VIAMSSTLPVEQQVNEGQR 59
           MGVIE  ++SS+C+ ++  S           C  + NQRR +I M+S++PV+++  + QR
Sbjct: 1   MGVIELCNTSSICIGRAKPS----------CCSIERNQRRRIICMASSVPVQEESQQKQR 50

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
            +TGD+FIR HL KL PYQPILPFEVLS +LGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 51  -VTGDAFIRPHLLKLSPYQPILPFEVLSTRLGRKPEDIVKLDANENPYGPPPEVIEALGA 109

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPYIYPDPESR LRAALA+DSGLES++IL GCGADELIDLIMRCVLDPGD IVDCPPT
Sbjct: 110 MKFPYIYPDPESRTLRAALAEDSGLESEYILAGCGADELIDLIMRCVLDPGDMIVDCPPT 169

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           FTMYEFDAAVNGA V+KVPR  DFSL+VE IA+ VE EKPKCIFLTSPNNPDGSI++DE 
Sbjct: 170 FTMYEFDAAVNGAHVIKVPRNPDFSLDVERIAEVVEHEKPKCIFLTSPNNPDGSIVDDET 229

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKIL++PILV+LDEAY EFSG+ES+M+WVKKH+NLIVLRTFSKRAGLAGLRVGYGAFP 
Sbjct: 230 LLKILDLPILVILDEAYVEFSGMESKMKWVKKHENLIVLRTFSKRAGLAGLRVGYGAFPK 289

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIE+LWRAKQPYNVSVAAEVAACAAL+NP YLE VK AL++ERERLF LLK+VPFL+PY
Sbjct: 290 SIIEFLWRAKQPYNVSVAAEVAACAALKNPTYLENVKVALVQERERLFNLLKEVPFLDPY 349

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILC+VTSGMDAKKLK+DLA MGVMIRHYN+KELKGYVRVSVGKPEHT+ALM+CL
Sbjct: 350 PSYSNFILCKVTSGMDAKKLKEDLATMGVMIRHYNSKELKGYVRVSVGKPEHTEALMKCL 409

Query: 420 MHLY 423
            H Y
Sbjct: 410 KHFY 413

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465360|ref|XP_004150396.1| PREDICTED: histidinol-phosphate aminotransferase 1, chloroplastic-like [Cucumis sativus]

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/429 (76%), Positives = 368/429 (85%), Gaps = 16/429 (3%)

Query: 1   MGVIETSSSSSLCLLK-------SNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQ 53
           M VI  S+ +  CLLK       S  SSH      R  C   G ++ V+ M+S +P    
Sbjct: 1   MAVIHISNPTQ-CLLKFKTNLPASEPSSH------RPNCSVAGRRKWVVNMTSQIPA--H 51

Query: 54  VNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEV 113
           V E Q+ LTGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDI+K+DANENPYGPPP+V
Sbjct: 52  VQETQQSLTGDSFIRPHLRKLSPYQPILPFEVLSTRLGRKPEDIIKLDANENPYGPPPDV 111

Query: 114 REALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173
            EALG +KFP++YPDPESR+LRAALA DSGLESD+ILVGCGADELIDLIMRCVLDPGDKI
Sbjct: 112 LEALGTMKFPHVYPDPESRQLRAALAIDSGLESDYILVGCGADELIDLIMRCVLDPGDKI 171

Query: 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233
           VDCPPTFTMYEFDAAVNGA V+KVPRK DFSLNV+LI D V +EKPKCIFLTSPNNPDGS
Sbjct: 172 VDCPPTFTMYEFDAAVNGALVIKVPRKPDFSLNVDLIEDVVRKEKPKCIFLTSPNNPDGS 231

Query: 234 IINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +I+DEDLLKIL++P+LVVLDEAY EFS  ES+M+WVKK++NLIVLRTFSKRAGLAGLRVG
Sbjct: 232 VISDEDLLKILDLPVLVVLDEAYIEFSSTESKMQWVKKYENLIVLRTFSKRAGLAGLRVG 291

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353
           YGAFPLSIIEY WRAKQPYNVSVAAE+AACAALQNP YLEKVK AL++ERERL+ LL DV
Sbjct: 292 YGAFPLSIIEYAWRAKQPYNVSVAAEIAACAALQNPSYLEKVKNALVQERERLYNLLTDV 351

Query: 354 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTD 413
           PFLNP+PS+SNFILCEVTSG DAKKLK+DLAKMGVMIRHY+ KELKGYVRV+ GKPEHTD
Sbjct: 352 PFLNPFPSHSNFILCEVTSGKDAKKLKEDLAKMGVMIRHYDKKELKGYVRVTAGKPEHTD 411

Query: 414 ALMECLMHL 422
           ALM+CL  L
Sbjct: 412 ALMDCLRRL 420

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212275482|ref|NP_001130883.1| uncharacterized protein LOC100191987 [Zea mays] gi|194690352|gb|ACF79260.1| unknown [Zea mays] gi|224028727|gb|ACN33439.1| unknown [Zea mays] gi|413938505|gb|AFW73056.1| histidinol-phosphate aminotransferase [Zea mays]

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/404 (78%), Positives = 352/404 (87%), Gaps = 8/404 (1%)

Query: 27  PNRTVCPFQGNQR----RVI--AMSSTLPVEQ--QVNEGQRRLTGDSFIRSHLRKLKPYQ 78
           P+     F G++R    RV    M+S  PVE+     E + RLTGDSFIR HLR L PYQ
Sbjct: 12  PSPAASHFAGHRRSQADRVFLRTMASAAPVEEPTAAAEAKGRLTGDSFIRRHLRTLAPYQ 71

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL 138
           PILPFEVLS +LGR+PEDI+K+DANENPYGPPPEV  ALG LKFPY+YPDPESR+LRAAL
Sbjct: 72  PILPFEVLSARLGRRPEDIIKLDANENPYGPPPEVAAALGSLKFPYVYPDPESRQLRAAL 131

Query: 139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           A+DSGLESD+IL GCGADELIDLIMRCVL+PGDKIVDCPPTFTMYEFDA+VNGA V+KVP
Sbjct: 132 AEDSGLESDYILAGCGADELIDLIMRCVLEPGDKIVDCPPTFTMYEFDASVNGALVIKVP 191

Query: 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE 258
           R  DFSL+V+LI + VE+E PKCIFLTSPNNPDGS+INDEDLLKIL++PILVVLDEAY E
Sbjct: 192 RLPDFSLDVDLIVEVVEQEMPKCIFLTSPNNPDGSVINDEDLLKILDLPILVVLDEAYIE 251

Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           FS L+SRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA
Sbjct: 252 FSSLQSRMAWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 311

Query: 319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK 378
           EV+ACAALQNP YLE VK  L+KERERLF LLK +PFL P+PS+SNFILCEVTSG DAKK
Sbjct: 312 EVSACAALQNPTYLENVKNLLVKERERLFNLLKGIPFLKPFPSHSNFILCEVTSGKDAKK 371

Query: 379 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422
           +K+DLAKMGVMIRHY+ KELKGY+R+SVGKPEHTDALM+ L  L
Sbjct: 372 IKEDLAKMGVMIRHYDKKELKGYIRISVGKPEHTDALMKGLNAL 415

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195640672|gb|ACG39804.1| histidinol-phosphate aminotransferase [Zea mays]

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/404 (78%), Positives = 353/404 (87%), Gaps = 8/404 (1%)

Query: 27  PNRTVCPFQGNQR----RVI--AMSSTLPVEQQVN--EGQRRLTGDSFIRSHLRKLKPYQ 78
           P+  V  F G++R    RV    M+S  PVE+     E + RLTGDSFIR HLR L PYQ
Sbjct: 12  PSPAVSHFAGHRRSQADRVFLRTMASAAPVEEPTAXAEAKGRLTGDSFIRRHLRTLAPYQ 71

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAAL 138
           PILPFEVLS +LGR+PEDI+K+DANENPYGPPPEV  ALG LKFPY+YPDPESR+LRAAL
Sbjct: 72  PILPFEVLSARLGRRPEDIIKLDANENPYGPPPEVAAALGSLKFPYVYPDPESRQLRAAL 131

Query: 139 AKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           A+DS LESD+IL GCGADELIDLIMRCVL+PGDKIVDCPPTFTMYEFDA+VNGA V+KVP
Sbjct: 132 AEDSRLESDYILAGCGADELIDLIMRCVLEPGDKIVDCPPTFTMYEFDASVNGALVIKVP 191

Query: 199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE 258
           R  DFSL+V+LI + VE+E+PKCIFLTSPNNPDGS+INDEDLLKIL++PILVVLDEAY E
Sbjct: 192 RLPDFSLDVDLIVEVVEQERPKCIFLTSPNNPDGSVINDEDLLKILDLPILVVLDEAYIE 251

Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           FS L+SRM WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA
Sbjct: 252 FSSLQSRMAWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 311

Query: 319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK 378
           EV+ACAALQNP YLE VK  L+KERERLF LLK +PFL P+PS+SNFILCEVTSG DAKK
Sbjct: 312 EVSACAALQNPTYLENVKNLLVKERERLFNLLKGIPFLKPFPSHSNFILCEVTSGKDAKK 371

Query: 379 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422
           +K+DLAKMGVMIRHY+ KELKGY+R+SVGKPEHTDALM+ L  L
Sbjct: 372 IKEDLAKMGVMIRHYDKKELKGYIRISVGKPEHTDALMKGLNAL 415

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18416245|ref|NP_568226.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|79327596|ref|NP_001031867.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|186494687|ref|NP_001117584.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|380876920|sp|B9DHD3.1|HIS8A_ARATH RecName: Full=Histidinol-phosphate aminotransferase 1, chloroplastic; AltName: Full=Gene duplicate 1-B protein; AltName: Full=Imidazole acetol-phosphate transaminase; AltName: Full=Protein EMBRYO DEFECTIVE 2196; AltName: Full=Protein HISTIDINE BIOSYNTHESIS 6A; Flags: Precursor gi|380876921|sp|P0DI07.1|HIS8B_ARATH RecName: Full=Histidinol-phosphate aminotransferase 2, chloroplastic; AltName: Full=Gene duplicate 1-A protein; AltName: Full=Imidazole acetol-phosphate transaminase; AltName: Full=Protein HISTIDINE BIOSYNTHESIS 6B; Flags: Precursor gi|15292797|gb|AAK92767.1| putative histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|21436321|gb|AAM51330.1| putative histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|222424389|dbj|BAH20150.1| AT5G10330 [Arabidopsis thaliana] gi|332004140|gb|AED91523.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|332004141|gb|AED91524.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana] gi|332197131|gb|AEE35252.1| Histidinol-phosphate aminotransferase [Arabidopsis thaliana]

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/424 (75%), Positives = 358/424 (84%), Gaps = 8/424 (1%)

Query: 1   MGVIETSSSSSLCLLKSNFSSHPFVVPNRTVC-PFQGNQRRVIAMSSTLPVEQQVNEGQR 59
           MGVI    S S  +     SS   +  +R +  PF   + RV    S+      V+E + 
Sbjct: 1   MGVINVQGSPSFSI----HSSESNLRKSRALKKPFCSIRNRVYCAQSS---SAAVDESKN 53

Query: 60  RLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ 119
              GDSFIR HLR+L  YQPILPFEVLS QLGRKPEDIVK+DANENPYGPPPEV EALG 
Sbjct: 54  ITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVFEALGN 113

Query: 120 LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           +KFPY+YPDP+SRRLR ALA+DSGLES++ILVGCGADELIDLIMRCVLDPG+KI+DCPPT
Sbjct: 114 MKFPYVYPDPQSRRLRDALAQDSGLESEYILVGCGADELIDLIMRCVLDPGEKIIDCPPT 173

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F+MY FDAAVNGA V+KVPR  DFSLNV+ IA+ VE EKPKCIFLTSPNNPDGSII+++D
Sbjct: 174 FSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDD 233

Query: 240 LLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           LLKILEMPILVVLDEAY EFSG+ESRM+WVKK++NLIVLRTFSKRAGLAGLRVGYGAFPL
Sbjct: 234 LLKILEMPILVVLDEAYIEFSGVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPL 293

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
           SIIEYLWRAKQPYNVSVA EVAA AAL N  YLE V++AL++ERERLF LLK+VPFLNPY
Sbjct: 294 SIIEYLWRAKQPYNVSVAGEVAALAALSNGKYLEDVRDALVRERERLFGLLKEVPFLNPY 353

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PSYSNFILCEVTSGMDAKKLK+DLAKMGVM+RHYN++ELKGYVRVS GKPEHTD LMECL
Sbjct: 354 PSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRHYNSQELKGYVRVSAGKPEHTDVLMECL 413

Query: 420 MHLY 423
              Y
Sbjct: 414 KQFY 417

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449496869|ref|XP_004160249.1| PREDICTED: histidinol-phosphate aminotransferase 1, chloroplastic-like [Cucumis sativus]

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/429 (76%), Positives = 366/429 (85%), Gaps = 16/429 (3%)

Query: 1   MGVIETSSSSSLCLLK-------SNFSSHPFVVPNRTVCPFQGNQRRVIAMSSTLPVEQQ 53
           M VI  S+ +  CLLK       S  SSH      R  C   G ++ V+ M+S +P    
Sbjct: 1   MAVIHISNPTQ-CLLKFKTNLPASEPSSH------RPNCSVAGRRKWVVNMTSQIPA--H 51

Query: 54  VNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEV 113
           V E Q+ LTGDSFIR HLRKL PYQPILPFEVLS +LGRKPEDI+K+DANENPYGPPP+V
Sbjct: 52  VQETQQSLTGDSFIRPHLRKLSPYQPILPFEVLSTRLGRKPEDIIKLDANENPYGPPPDV 111

Query: 114 REALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173
            EALG +KFP++YPDPESR+LRAALA DSGLESD+ILVGCGADELIDLIMRCVLDPGDKI
Sbjct: 112 LEALGTMKFPHVYPDPESRQLRAALAIDSGLESDYILVGCGADELIDLIMRCVLDPGDKI 171

Query: 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233
           VDCPPTFTMYEFDAAVNGA V+KVPRK DFSLNV+LI D V +EKPKCIFLTSPNNPDGS
Sbjct: 172 VDCPPTFTMYEFDAAVNGALVIKVPRKPDFSLNVDLIEDVVRKEKPKCIFLTSPNNPDGS 231

Query: 234 IINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +I+DEDLLKIL++P+LVVLDEAY EFS  ES+M+WVKK++NLIVLRTFSKRAGLAGLRVG
Sbjct: 232 VISDEDLLKILDLPVLVVLDEAYIEFSSTESKMQWVKKYENLIVLRTFSKRAGLAGLRVG 291

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353
           YGAFPLSIIEY WRAKQPYNVSVAAE+AACAALQNP YLE  K AL++ERERL+ LL DV
Sbjct: 292 YGAFPLSIIEYAWRAKQPYNVSVAAEIAACAALQNPSYLENSKNALVQERERLYNLLTDV 351

Query: 354 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTD 413
           PFLNP+PS+SNFILCEVTSG DAKKLK+DLAKMGVMIRHY+ KELKGYVRV+ GKPEHTD
Sbjct: 352 PFLNPFPSHSNFILCEVTSGKDAKKLKEDLAKMGVMIRHYDKKELKGYVRVTAGKPEHTD 411

Query: 414 ALMECLMHL 422
           ALM+CL  L
Sbjct: 412 ALMDCLRRL 420

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
TAIR|locus:2016099	417	HISN6B "HISTIDINE BIOSYNTHESIS	0.917	0.930	0.744	4.9e-156
TAIR|locus:2145382	417	HPA1 "histidinol phosphate ami	0.917	0.930	0.744	4.9e-156
TIGR_CMR|DET_0843	358	DET_0843 "histidinol-phosphate	0.773	0.913	0.409	4.1e-65
TIGR_CMR|CHY_1086	349	CHY_1086 "histidinol-phosphate	0.791	0.959	0.345	9.8e-48
TIGR_CMR|BA_1539	370	BA_1539 "histidinol-phosphate	0.820	0.937	0.315	4.6e-41
TIGR_CMR|CHY_1929	362	CHY_1929 "histidinol-phosphate	0.789	0.922	0.328	8.7e-40
ASPGD|ASPL0000053485	447	AN0717 [Emericella nidulans (t	0.579	0.548	0.353	1.1e-38
TIGR_CMR|SPO_3177	361	SPO_3177 "histidinol-phosphate	0.758	0.889	0.291	6.3e-37
TIGR_CMR|BA_2955	366	BA_2955 "histidinol-phosphate	0.796	0.920	0.300	1.2e-35
UNIPROTKB|P06986	356	hisC "HisC" [Escherichia coli	0.787	0.935	0.302	1.3e-34

TAIR|locus:2016099 HISN6B "HISTIDINE BIOSYNTHESIS 6B" [Arabidopsis thaliana (taxid:3702)]

 Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
 Identities = 291/391 (74%), Positives = 324/391 (82%)

Query:    33 PFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGR 92
             PF   + RV    S+      V+E +    GDSFIR HLR+L  YQPILPFEVLS QLGR
Sbjct:    30 PFCSIRNRVYCAQSS---SAAVDESKNITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGR 86

Query:    93 KPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVG 152
             KPEDIVK+DANENPYGPPPEV EALG +KFPY+YPDP+SRRLR ALA+DSGLES++ILVG
Sbjct:    87 KPEDIVKLDANENPYGPPPEVFEALGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVG 146

Query:   153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212
             CGADELIDLIMRCVLDPG+KI+DCPPTF+MY FDAAVNGA V+KVPR  DFSLNV+ IA+
Sbjct:   147 CGADELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAE 206

Query:   213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKH 272
              VE EKPKCIFLTSPNNPDGSII+++DLLKILEMPILVVLDEAY EFSG+ESRM+WVKK+
Sbjct:   207 VVELEKPKCIFLTSPNNPDGSIISEDDLLKILEMPILVVLDEAYIEFSGVESRMKWVKKY 266

Query:   273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
             +NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN            L N  YL
Sbjct:   267 ENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYL 326

Query:   333 EKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRH 392
             E V++AL++ERERLF LLK+VPFLNPYPSYSNFILCEVTSGM           MGVM+RH
Sbjct:   327 EDVRDALVRERERLFGLLKEVPFLNPYPSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRH 386

Query:   393 YNNKELKGYVRVSVGKPEHTDALMECLMHLY 423
             YN++ELKGYVRVS GKPEHTD LMECL   Y
Sbjct:   387 YNSQELKGYVRVSAGKPEHTDVLMECLKQFY 417

GO:0000105 "histidine biosynthetic process" evidence=IEA;IGI

GO:0003824 "catalytic activity" evidence=IEA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=IEA;IGI;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

TAIR|locus:2145382 HPA1 "histidinol phosphate aminotransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1521 (540.5 bits), Expect = 4.9e-156, P = 4.9e-156
 Identities = 291/391 (74%), Positives = 324/391 (82%)

Query:    33 PFQGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGR 92
             PF   + RV    S+      V+E +    GDSFIR HLR+L  YQPILPFEVLS QLGR
Sbjct:    30 PFCSIRNRVYCAQSS---SAAVDESKNITMGDSFIRPHLRQLAAYQPILPFEVLSAQLGR 86

Query:    93 KPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVG 152
             KPEDIVK+DANENPYGPPPEV EALG +KFPY+YPDP+SRRLR ALA+DSGLES++ILVG
Sbjct:    87 KPEDIVKLDANENPYGPPPEVFEALGNMKFPYVYPDPQSRRLRDALAQDSGLESEYILVG 146

Query:   153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIAD 212
             CGADELIDLIMRCVLDPG+KI+DCPPTF+MY FDAAVNGA V+KVPR  DFSLNV+ IA+
Sbjct:   147 CGADELIDLIMRCVLDPGEKIIDCPPTFSMYVFDAAVNGAGVIKVPRNPDFSLNVDRIAE 206

Query:   213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKH 272
              VE EKPKCIFLTSPNNPDGSII+++DLLKILEMPILVVLDEAY EFSG+ESRM+WVKK+
Sbjct:   207 VVELEKPKCIFLTSPNNPDGSIISEDDLLKILEMPILVVLDEAYIEFSGVESRMKWVKKY 266

Query:   273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYL 332
             +NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN            L N  YL
Sbjct:   267 ENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAGEVAALAALSNGKYL 326

Query:   333 EKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRH 392
             E V++AL++ERERLF LLK+VPFLNPYPSYSNFILCEVTSGM           MGVM+RH
Sbjct:   327 EDVRDALVRERERLFGLLKEVPFLNPYPSYSNFILCEVTSGMDAKKLKEDLAKMGVMVRH 386

Query:   393 YNNKELKGYVRVSVGKPEHTDALMECLMHLY 423
             YN++ELKGYVRVS GKPEHTD LMECL   Y
Sbjct:   387 YNSQELKGYVRVSAGKPEHTDVLMECLKQFY 417

GO:0000105 "histidine biosynthetic process" evidence=IEA;TAS

GO:0003824 "catalytic activity" evidence=IEA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=IEA;IGI;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TIGR_CMR|DET_0843 DET_0843 "histidinol-phosphate aminotransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 136/332 (40%), Positives = 207/332 (62%)

Query:    89 QLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
             +L +    I+K+DANEN YG  P V++A+      +IYPD     +R  LA+ +G+  + 
Sbjct:    26 ELVKTKNRIIKLDANENLYGAAPTVQKAMSTFDQYHIYPDATQFEIRRLLAEYTGVNMEQ 85

Query:   149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
             I+ G G+D+LIDL++R  ++PGD++++CPPTF MY+F   +N   VV VPR + + +N+ 
Sbjct:    86 IICGAGSDQLIDLLLRLFINPGDEVINCPPTFAMYKFYTDLNRGTVVNVPRDAGYDVNIG 145

Query:   209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
              I +A+   K K IF+ +PNNP G+ I+ ED+ +IL++ +  V+DEAY EF+G ++ +  
Sbjct:   146 GIKNALT-PKTKLIFIAAPNNPTGTAISKEDIRQILDLGVPTVIDEAYYEFTG-QTMVTD 203

Query:   269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXX-LQ 327
             +  + NL++LRTFSK AGLAGLRVGYG FP  I +YL R K PY+             LQ
Sbjct:   204 MPSYPNLMILRTFSKWAGLAGLRVGYGLFPPVIADYLSRIKDPYSVNIAADAAVRQTMLQ 263

Query:   328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMG 387
                 LE VK+ ++ ER+RL+  L    +L PYPS +NFILC++  G             G
Sbjct:   264 REYMLETVKK-IVDERKRLYTELSKFSWLKPYPSAANFILCKLLKGKAKDVQQALES-QG 321

Query:   388 VMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
             +++R ++   ++  +R SVGKPE TDAL++ L
Sbjct:   322 ILVRCFDAPMMENCLRFSVGKPEDTDALLKAL 353

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|CHY_1086 CHY_1086 "histidinol-phosphate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 124/359 (34%), Positives = 197/359 (54%)

Query:    66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPP----EVREALGQLK 121
             + +    +LKPY+P L    +S +        +K+DANENPY  P     E+   +G   
Sbjct:     6 YFKEAFAQLKPYEPHL----VSYE--------IKLDANENPYLFPKSLLEEIFSKIGTRD 53

Query:   122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181
             FP +YPDP + RLR  L++  G+  ++I++G G+DELI  +       G   +   P+F 
Sbjct:    54 FP-LYPDPLAGRLRIRLSEKLGVLPENIVLGNGSDELILCLYLAFGGYGRIALSFSPSFV 112

Query:   182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
             MY   A V      +V  + DFSL+++    A+E+ +P  +FL +PNNP G++++ E + 
Sbjct:   113 MYRHHAFVTQTEFFEVSYRDDFSLDLDETKKAIEKYQPHLVFLANPNNPTGTLVDIETIK 172

Query:   242 KILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
             K+L    L+V+DEAY EFSG+ S ++ +KK+ NL++LRTFSK   LAGLR+GY    + +
Sbjct:   173 KLLAYDHLLVVDEAYVEFSGV-SAIDLLKKYQNLVILRTFSKARALAGLRLGYLVASVDV 231

Query:   302 IEYLWRAKQPYNXXXXXXXXXXXXLQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYP 360
             ++ + + K PYN            L N  ++  ++KE ++ ERERL+  L  +  L P  
Sbjct:   232 VKEIIKVKNPYNVNVFSQIAGEVVLANEEVFQGEIKE-IVAERERLYNQLASLG-LKPVK 289

Query:   361 SYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
             S++NFIL E   G             G+++R Y    L  Y+R++VG PE    L++ L
Sbjct:   290 SHANFILVEF--GEKAKKIHQELINHGILVR-YLGGALANYLRITVGTPEENRQLLKKL 345

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|BA_1539 BA_1539 "histidinol-phosphate aminotransferase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 115/365 (31%), Positives = 185/365 (50%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-I 125
             ++  L  L+ Y P    E +  + G     IVK+ +NENP+G    V EAL  L   Y +
Sbjct:     3 VKEQLLTLRAYVPGKNIEEVKREYGLSK--IVKLASNENPFGCSARVTEALTSLASQYAL 60

Query:   126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
             YPD  +  LR  +AK  G++++ +L G G DE+I +I R +L  G  +V   PTF+ Y  
Sbjct:    61 YPDGHAFELRTQVAKHLGVKAEQLLFGSGLDEVIQMISRALLHEGTNVVMANPTFSQYHH 120

Query:   186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              A + GA V +V  K     +++ +   V+ ++ K +++ +PNNP G+ +  + LL  LE
Sbjct:   121 HAVIEGAEVREVSLKDGIH-DLDAMLQQVD-DQTKIVWICNPNNPTGTYVEKQKLLSFLE 178

Query:   246 -MP--ILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
              +P   LV++DEAY E++G E     +  ++K++NL+VLRTFSK  GLA  R+GY     
Sbjct:   179 SVPKSALVIMDEAYYEYAGAEDYPQTLPLLEKYENLMVLRTFSKAYGLAAFRIGYAVGNT 238

Query:   300 SIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNP- 358
              +I  L  A+ P+N            L++  +L+   E + K  E L +        N  
Sbjct:   239 ELIGQLEVARLPFNTSTVAQSVALAALEDQAFLQ---ECVKKNEEGLHQYYAFCKEYNVF 295

Query:   359 -YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 417
              YPS +NFI  ++  G+            G ++R      +   +R++VG  E  D ++E
Sbjct:   296 YYPSQTNFIFLKL--GIPGNEAFERLMKKGYIVRSGAAFGIDDGIRITVGLKEENDEIIE 353

Query:   418 CLMHL 422
              L  L
Sbjct:   354 LLKEL 358

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|CHY_1929 CHY_1929 "histidinol-phosphate aminotransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 116/353 (32%), Positives = 194/353 (54%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPY 124
             +R  L  LKPY P  P E +  +LG    +I K+ +NEN +G  P+V  A+ +   K  Y
Sbjct:     2 VRKALENLKPYVPGKPVEEVERELGIT--NIDKLASNENLWGISPKVAAAIKEAVDKVNY 59

Query:   125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
              YPD  + RL+  +A   G+  D+I++G G+DEL+  +   ++DPGD+ +   P+F  YE
Sbjct:    60 -YPDGGAFRLKEKIAAKYGVTPDNIILGNGSDELVMFLAMALIDPGDEAIMPVPSFPRYE 118

Query:   185 -FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
                  +NG A  ++P K +  L+++ +A+AV  EK + ++L +PNNP G+ I   +L + 
Sbjct:   119 PVVTMMNGIAR-EIPLK-EHRLDLKTMAEAVN-EKTRLVYLCNPNNPTGTYITKGELEEF 175

Query:   244 LE-MP--ILVVLDEAYTEFSGL----ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
             LE +P  ++VVLDEAY EF+ L       + + KK  N +VLRTFSK  GLAGLRVGYG 
Sbjct:   176 LERVPEEVVVVLDEAYFEFARLFNDYPDGLNFFKKRPNTVVLRTFSKAYGLAGLRVGYGF 235

Query:   297 FPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVKEALIKERERLFKLLKDVPFL 356
              P ++ + +   + P+N            L +  Y+ +V +   + ++ L++ +  +  L
Sbjct:   236 APENLAKAINSLRPPFNVNFLAQMAAVAALDDEEYVREVVKNTDEGKKFLYQEIIRMG-L 294

Query:   357 NPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKP 409
             +  PS +NF++  + +              GV++R  +   +  ++RV+VG P
Sbjct:   295 SYIPSAANFLM--IKTEKPSALVFRELLKRGVIVRSGDIFGMDDWIRVTVGTP 345

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

ASPGD|ASPL0000053485 AN0717 [Emericella nidulans (taxid:162425)]

 Score = 380 (138.8 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
 Identities = 94/266 (35%), Positives = 140/266 (52%)

Query:   126 YPDPESRRLRAALAK--------DSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDC 176
             YPDP    L+             D  +  +++ VG G+DE ID ++R    PG DKI+ C
Sbjct:   104 YPDPHQHPLKQLFCNIRNTHTHTDKTITPENLFVGVGSDEAIDALLRAFCVPGKDKILTC 163

Query:   177 PPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKP-KCIFLTSPNNPDGS 233
             PPT+ MY   A VN   +VKVP  +D  F+L  E I  A+  +   K +++ SP NP  +
Sbjct:   164 PPTYGMYSVSADVNDVEIVKVPLDTDNGFALQPEKINAALSADPTIKLVYICSPGNPTAT 223

Query:   234 IINDEDLLKILEMPI---LVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAG 289
             +++  D+ K+LE P    +VVLDEAY +F+   S + EWV +  NL+V++T SK  GLAG
Sbjct:   224 LVSKSDIQKVLEHPTWNGVVVLDEAYIDFAPEGSSLAEWVAEWPNLVVMQTLSKAFGLAG 283

Query:   290 LRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVKE---ALIKERERL 346
             +R+G       I   L   K PYN            L NP  LE ++     +I +R+R+
Sbjct:   284 IRLGVAFTSPEIATLLNSLKAPYNISSPTSALAMAALGNPKNLEVMRSYRSKIIAQRDRI 343

Query:   347 FKLLKDVPFLNPYP--SYSNFILCEV 370
              K L  +P +  +   + SNF+L E+
Sbjct:   344 LKELPSIPGIGRFRGGTESNFLLVEI 369

GO:0006547 "histidine metabolic process" evidence=RCA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0000105 "histidine biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0010045 "response to nickel cation" evidence=IEA

TIGR_CMR|SPO_3177 SPO_3177 "histidinol-phosphate aminotransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 96/329 (29%), Positives = 169/329 (51%)

Query:    96 DIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCG 154
             +++K+ +NENP GP P   EA+       + YP  +   LRAA+    GL+ D I+ G G
Sbjct:    28 NVIKLSSNENPLGPSPAAVEAIRATAAQAHRYPSTDHAELRAAIGAVHGLDPDRIICGVG 87

Query:   155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214
             +DE++  + +    PGD+++     F+MY   A + GA  V+VP +    ++V+ I  AV
Sbjct:    88 SDEVLQFVAQAYTGPGDEVIHTEHGFSMYPILARMAGATPVQVPERQRV-VDVDAILAAV 146

Query:   215 EREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--ILVVLDEAYTEF-SGLESRMEWVK 270
               ++ + +FL +P NP G++I++ ++ ++ + +P  +L+VLD AY EF  G +     V 
Sbjct:   147 N-DRTRLVFLANPANPTGTMISEAEVTRLADGLPGHVLLVLDGAYAEFVEGFDGGAALVS 205

Query:   271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPI 330
               DN+I+ RTFSK  GL GLR+G+G  P  II+ L R +QP+N            +++  
Sbjct:   206 ARDNVIMTRTFSKIYGLGGLRIGWGYAPREIIDVLNRIRQPFNLSTMQLAAAEAAVRDQD 265

Query:   331 YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMI 390
             ++ + ++     R  L   L ++   +   S +NFIL                   G+++
Sbjct:   266 WVARCRDQNTTWRTWLAARLAELGVPSDV-SCANFILARFADQGEAEACDLFLQSRGLIV 324

Query:   391 RHYNNKELKGYVRVSVGKPEHTDALMECL 419
             R      L   +R++VG      A+++ +
Sbjct:   325 RRVAGYNLPQALRITVGDEAGCRAVVDAV 353

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

TIGR_CMR|BA_2955 BA_2955 "histidinol-phosphate aminotransferase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 109/363 (30%), Positives = 175/363 (48%)

Query:    67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-I 125
             ++  L  L+PY+P    E +    G      VK+ +NENP+G  P V + L +    + +
Sbjct:     3 VKDQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHAL 60

Query:   126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
             YPD  +  LR  +A    ++ + +L G G DE+I +I R VL  GD IV    TF  Y  
Sbjct:    61 YPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQMISRAVLKAGDNIVTAGATFPQYRH 120

Query:   186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              A + G  V +V   +    +++ I+  V+ +  K +++ +PNNP G+ +ND  L + +E
Sbjct:   121 HAIIEGCEVKEVALNNGV-YDLDEISSVVDNDT-KIVWICNPNNPTGTYVNDRKLTQFIE 178

Query:   246 ---MPILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
                   L+V+DEAY E+         +  ++KH N++VLRTFSK  GLA  RVGY     
Sbjct:   179 GISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238

Query:   300 SIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLE---KVKEALIKERERLFKLLKDVPFL 356
              +IE L   + P+N              +  ++E   +V    +++ E   K   ++PF 
Sbjct:   239 ELIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKE-NEIPF- 296

Query:   357 NPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 416
               Y S +NFI   V +G             G +IR + N    G VR++VG  E  + ++
Sbjct:   297 --YQSQTNFIFLPVENG---GEIYEACAHAGFIIRPFPN----G-VRITVGTREQNEGVI 346

Query:   417 ECL 419
               L
Sbjct:   347 SVL 349

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004400 "histidinol-phosphate transaminase activity" evidence=ISS

UNIPROTKB|P06986 hisC "HisC" [Escherichia coli K-12 (taxid:83333)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 109/360 (30%), Positives = 178/360 (49%)

Query:    68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYP 127
             R ++R L PYQ        + +LG   +  V ++ANE  Y  P  V   L Q      YP
Sbjct:    11 RENVRNLTPYQS-------ARRLGGNGD--VWLNANE--Y--PTAVEFQLTQQTLNR-YP 56

Query:   128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFD 186
             + + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT+ MY   
Sbjct:    57 ECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVS 116

Query:   187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
             A   G     VP   ++ L+++ I+D ++  K   +++ SPNNP G +IN +D   +LE+
Sbjct:   117 AETIGVECRTVPTLDNWQLDLQGISDKLDGVK--VVYVCSPNNPTGQLINPQDFRTLLEL 174

Query:   247 P---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
                  +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+      +I 
Sbjct:   175 TRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVIN 234

Query:   304 YLWRAKQPYNXXXXXXXXXXXXL--QNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YP 360
              L +   PY             L  Q  + + +    +I ERE L   LK++P +   + 
Sbjct:   235 LLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFD 294

Query:   361 SYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK-ELKGYVRVSVGKPEHTDALMECL 419
             S +N+IL    +              G+++R  N +  L G +R++VG  E +  +++ L
Sbjct:   295 SETNYILARFKAS---SAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDAL 351

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0080130 "L-phenylalanine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0004400 "histidinol-phosphate transaminase activity" evidence=IEA;IDA

GO:0000105 "histidine biosynthetic process" evidence=IEA;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q58365	HIS8_METJA	2, ., 6, ., 1, ., 9	0.3852	0.8321	0.9436	yes	no
P61003	HIS8_METMP	2, ., 6, ., 1, ., 9	0.3648	0.8534	0.9730	yes	no
A6VGF6	HIS8_METM7	2, ., 6, ., 1, ., 9	0.3569	0.8463	0.9649	yes	no
A8YZZ5	HIS8_STAAT	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
A6UTL8	HIS8_META3	2, ., 6, ., 1, ., 9	0.3648	0.8534	0.9730	yes	no
O27624	HIS8_METTH	2, ., 6, ., 1, ., 9	0.3643	0.8321	0.9436	yes	no
A6QF32	HIS8_STAAE	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
O82030	HIS8_TOBAC	2, ., 6, ., 1, ., 9	0.7735	0.9739	0.9975	N/A	no
Q2G087	HIS8_STAA8	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
A5IQS7	HIS8_STAA9	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
Q4L4E7	HIS8_STAHJ	2, ., 6, ., 1, ., 9	0.3698	0.8037	0.9686	yes	no
A6TZK2	HIS8_STAA2	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
P67724	HIS8_STAAM	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
P67725	HIS8_STAAN	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
Q46E46	HIS8_METBF	2, ., 6, ., 1, ., 9	0.3598	0.8321	0.9617	yes	no
Q2YSI3	HIS8_STAAB	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
Q8NXN3	HIS8_STAAW	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
A7WZL0	HIS8_STAA1	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
Q3Z879	HIS8_DEHE1	2, ., 6, ., 1, ., 9	0.4106	0.8226	0.9720	yes	no
Q8PX17	HIS8_METMA	2, ., 6, ., 1, ., 9	0.3818	0.8321	0.9565	yes	no
A6UPL6	HIS8_METVS	2, ., 6, ., 1, ., 9	0.3648	0.8534	0.9730	yes	no
Q6GBA6	HIS8_STAAS	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
P0DI07	HIS8B_ARATH	2, ., 6, ., 1, ., 9	0.7547	0.9834	0.9976	yes	no
Q5HR08	HIS8_STAEQ	2, ., 6, ., 1, ., 9	0.3498	0.8085	0.9743	yes	no
Q2NEQ0	HIS8_METST	2, ., 6, ., 1, ., 9	0.3269	0.8297	0.9564	yes	no
A5V022	HIS8_ROSS1	2, ., 6, ., 1, ., 9	0.4780	0.8439	0.9648	yes	no
P17731	HIS8_BACSU	2, ., 6, ., 1, ., 9	0.3360	0.8274	0.9722	yes	no
Q9FEW2	HIS8_NICPL	2, ., 6, ., 1, ., 9	0.7783	0.9739	0.9975	N/A	no
B2UPR9	HIS8_AKKM8	2, ., 6, ., 1, ., 9	0.3656	0.8297	0.9669	yes	no
A7NFV2	HIS8_ROSCS	2, ., 6, ., 1, ., 9	0.4861	0.8368	0.9541	yes	no
Q5HHU9	HIS8_STAAC	2, ., 6, ., 1, ., 9	0.3691	0.8085	0.9715	yes	no
A9AA96	HIS8_METM6	2, ., 6, ., 1, ., 9	0.3540	0.8534	0.9730	yes	no
Q8TUE9	HIS8_METAC	2, ., 6, ., 1, ., 9	0.3763	0.8321	0.9591	yes	no
A4FWW1	HIS8_METM5	2, ., 6, ., 1, ., 9	0.3569	0.8463	0.9649	yes	no
B9DHD3	HIS8A_ARATH	2, ., 6, ., 1, ., 9	0.7547	0.9834	0.9976	yes	no
Q12U08	HIS8_METBU	2, ., 6, ., 1, ., 9	0.3593	0.8203	0.9638	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.983
4th Layer	2.6.1.9	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	HPA1	HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1); histidinol-phosphate transaminase; Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. (417 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT4G14910	imidazoleglycerol-phosphate dehydratase, putative; imidazoleglycerol-phosphate dehydratase, put [...] (308 aa)	•		•	•		•	•		0.997
	ATHDH	ATHDH (HISTIDINOL DEHYDROGENASE); histidinol dehydrogenase; Encodes histidinol dehydrogenase. U [...] (466 aa)	•	•	•	•	•	•	•		0.997
	IGPD	IGPD; imidazoleglycerol-phosphate dehydratase; Encodes imidazoleglycerolphosphate dehydratase. (270 aa)	•		•	•		•	•		0.995
	AT-IE	AT-IE; phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP diphosphatase; encodes a bifunctio [...] (281 aa)	•		•	•			•		0.990
	AT-HF	AT-HF (HIS HF); imidazoleglycerol-phosphate synthase; encodes a glutamine amidotransferase and [...] (592 aa)	•		•	•		•	•		0.985
	ATATP-PRT2	ATATP-PRT2 (ATP PHOSPHORIBOSYL TRANSFERASE 2); ATP phosphoribosyltransferase; ATP phosphoribosy [...] (413 aa)	•		•	•			•		0.922
	AT4G20720	dentin sialophosphoprotein-related; dentin sialophosphoprotein-related; FUNCTIONS IN- molecular [...] (729 aa)							•		0.919
	ATATP-PRT1	ATATP-PRT1 (ATP PHOSPHORIBOSYL TRANSFERASE 1); ATP phosphoribosyltransferase; ATP phosphoribosy [...] (411 aa)	•		•	•			•		0.914
	PDS1	PDS1 (PHYTOENE DESATURATION 1); 4-hydroxyphenylpyruvate dioxygenase; Mutation of the PDS1 locus [...] (473 aa)	•					•			0.913
	PAL3	PAL3 (PHENYL ALANINE AMMONIA-LYASE 3); phenylalanine ammonia-lyase; Member of Phenylalanine amm [...] (694 aa)	•					•			0.901

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	423
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	0.0
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	1e-116
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	1e-110
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	1e-104
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	6e-96
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	2e-90
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	1e-76
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	7e-76
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	3e-74
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	5e-73
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	2e-67
PRK03321	352	PRK03321, PRK03321, putative aminotransferase; Pro	6e-65
PRK03317	368	PRK03317, PRK03317, histidinol-phosphate aminotran	1e-60
PRK02610	374	PRK02610, PRK02610, histidinol-phosphate aminotran	3e-60
PRK05387	353	PRK05387, PRK05387, histidinol-phosphate aminotran	7e-59
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	7e-57
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	8e-56
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	9e-56
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	4e-53
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	3e-52
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	1e-49
PRK08153	369	PRK08153, PRK08153, histidinol-phosphate aminotran	2e-49
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	4e-48
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	4e-48
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	4e-46
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	2e-41
PRK07392	360	PRK07392, PRK07392, threonine-phosphate decarboxyl	2e-38
PRK14808	335	PRK14808, PRK14808, histidinol-phosphate aminotran	4e-34
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	3e-31
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	1e-28
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	2e-24
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	1e-22
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	1e-21
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	3e-21
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	4e-21
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	2e-19
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	1e-17
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	1e-16
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	1e-16
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	6e-16
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	1e-15
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	4e-15
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	5e-15
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	8e-14
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	8e-14
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	1e-13
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	6e-13
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	7e-13
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	1e-12
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	3e-12
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	4e-12
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	4e-11
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	2e-10
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	4e-10
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	8e-10
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	2e-09
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	2e-09
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	2e-09
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	5e-09
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	6e-09
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	3e-08
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	4e-08
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	1e-07
PRK05664	330	PRK05664, PRK05664, threonine-phosphate decarboxyl	1e-07
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	3e-07
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	3e-07
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	7e-07
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	8e-07
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	1e-06
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	2e-06
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	3e-06
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	3e-06
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	5e-06
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	6e-06
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	6e-06
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	7e-06
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	5e-05
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	8e-05
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	9e-05
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	1e-04
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	1e-04
PRK06959	339	PRK06959, PRK06959, putative threonine-phosphate d	2e-04
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	2e-04
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	3e-04
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	5e-04
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	5e-04
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	6e-04
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	0.001
TIGR01977	376	TIGR01977, am_tr_V_EF2568, cysteine desulfurase fa	0.001
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	0.001

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score =  706 bits (1825), Expect = 0.0
 Identities = 303/372 (81%), Positives = 335/372 (90%)

Query: 52  QQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPP 111
             ++E ++  +GDSFIR H+ +L PYQPILPFEVLS QLGRKPEDIVK+DANENPYGPPP
Sbjct: 9   TAMSEVKQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPP 68

Query: 112 EVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171
           EV EALG +KFPY+YPDPESRRLRAALA+DSGLES++ILVGCGADELIDL+MRCVLDPGD
Sbjct: 69  EVLEALGNMKFPYVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGD 128

Query: 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD 231
           KI+DCPPTF MY FDAAVNGA V+KVPR  DFSL+V  I +AVE  KPK +FLTSPNNPD
Sbjct: 129 KIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPD 188

Query: 232 GSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291
           GSII+D+DLLKILE+PILVVLDEAY EFS  ESRM+WVKK+DNLIVLRTFSKRAGLAGLR
Sbjct: 189 GSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLR 248

Query: 292 VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK 351
           VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAAL NP YLE VK AL++ERERLF LLK
Sbjct: 249 VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLK 308

Query: 352 DVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH 411
           +VPFL PYPS +NFILC VTSG DAKKLK+DLAKMGVM+RHYN+KELKGY+RVSVGKPEH
Sbjct: 309 EVPFLEPYPSDANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVGKPEH 368

Query: 412 TDALMECLMHLY 423
           TDALME L  LY
Sbjct: 369 TDALMEALKQLY 380

Length = 380

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score =  342 bits (879), Expect = e-116
 Identities = 146/357 (40%), Positives = 220/357 (61%), Gaps = 17/357 (4%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFP-YIY 126
           R  ++ L PYQP               ++++K+++NENP+GPPP+ +EAL       + Y
Sbjct: 1   RPDIKNLSPYQPARELGG---------KEVIKLNSNENPFGPPPKAKEALRAEADKLHRY 51

Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PDP+   L+ ALA   G++ + IL+G G+DE+I+L++R  L+PGD ++  PPT++MYE  
Sbjct: 52  PDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEIS 111

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           A ++GA VVKVP   D  L++E I  A++ +KPK +FL SPNNP G++++  D+  +LE 
Sbjct: 112 AKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLER 170

Query: 247 PI---LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
                LVV+DEAY EFSG  S +  + ++ NLIVLRT SK  GLAGLR+GY      II+
Sbjct: 171 TPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIID 230

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS 363
            L + + P+N+S  A+ AA AAL++  ++EK  E +  ERERL+  LK +P L  YPS +
Sbjct: 231 ALNKVRAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYPSDA 290

Query: 364 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECL 419
           NF+L       DA  L + L + G+++R  N+   L   +R++VG  E  D  +  L
Sbjct: 291 NFVLIRF--PRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVGTREENDRFLAAL 345

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  326 bits (839), Expect = e-110
 Identities = 157/359 (43%), Positives = 221/359 (61%), Gaps = 18/359 (5%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           +R  +R L PY P                 I+K+ +NENPYGPPP+V EA+   L     
Sbjct: 2   LRPLVRDLPPYVPG--------ARQYGLPGIIKLSSNENPYGPPPKVIEAIRAALDKLNR 53

Query: 126 YPDPESRRLRAALA-KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YPDP+ R LRAALA     ++ +++LVG G+DELI+L++R  ++PGD ++   PTF+MYE
Sbjct: 54  YPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE 113

Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
             A + GA VVKVP K +F L+++ I  A+ R+K K +FL +PNNP G+++  E+L  +L
Sbjct: 114 IAAQLAGAEVVKVPLK-EFRLDLDAILAAI-RDKTKLVFLCNPNNPTGTLLPREELRALL 171

Query: 245 EMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
           E      LVV+DEAY EFS  ES +E +K   NLIVLRTFSK  GLAGLRVGY      +
Sbjct: 172 EALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPEL 230

Query: 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS 361
           I  L + + P+NVS  A  AA AAL++  YLE+  E + +ERERL+  LK +     +PS
Sbjct: 231 IAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALGLFGVFPS 290

Query: 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECL 419
            +NF+L  V    +A  L + L K G+++R  ++  L  GY+R++VG PE  D L+  L
Sbjct: 291 QANFVLVRVPDA-EAAALAEALLKKGILVRDCSSVGLLPGYLRITVGTPEENDRLLAAL 348

Length = 356

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score =  313 bits (804), Expect = e-104
 Identities = 150/349 (42%), Positives = 223/349 (63%), Gaps = 12/349 (3%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           IR+ ++++KPY P    E ++ + G  PE I+K+ +NENP GP P+  EA+ + L   + 
Sbjct: 6   IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHR 65

Query: 126 YPDPESRRLRAALAKDSGLESDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           YP+P++  LR AL+K +G+  ++I+V G G DE+ID +MR  +DPGD+++   PTF+ YE
Sbjct: 66  YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYE 125

Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
             A  +GA  V   R+ DFSL+V+ + +A+  EK K IFL +PNNP G++I +ED+ KIL
Sbjct: 126 ISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIFLCTPNNPTGNLIPEEDIRKIL 184

Query: 245 E-MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           E    LV +DEAY EF+  +       ++DNLI+ RTFSK  GLAGLR+GYG  P  +I+
Sbjct: 185 ESTDALVFVDEAYVEFAEYDYT-PLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS 363
           Y  RAK P++++  ++ AA AAL +  Y+EK  E  IK RE L+  L        YPS +
Sbjct: 244 YYMRAKTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYPSEA 299

Query: 364 NFILCEVTSGMDAKKLKDDLAKMGVMIRH-YNNKELKG-YVRVSVGKPE 410
           NF+L +VT  M AK+  ++L K GV++R   + + L   Y+RVS+G  E
Sbjct: 300 NFVLVDVT-PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIGTFE 347

Length = 361

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score =  292 bits (749), Expect = 6e-96
 Identities = 129/359 (35%), Positives = 197/359 (54%), Gaps = 12/359 (3%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIY 126
              +  + PY P  P E L  + G    DI+K+ +NENP GP P+  EA+       + Y
Sbjct: 7   NPGILDIAPYVPGKPIEELVREYG--IADIIKLASNENPLGPSPKAIEAIRAAADELHRY 64

Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PD     L+AALA+  G++ + I++G G+DE+++L+ R  L PGD+++     F +Y   
Sbjct: 65  PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIA 124

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE- 245
           A   GA  V+VP K D+  +++ +  AV   + + +F+ +PNNP G+ +  E++ + L  
Sbjct: 125 AQAVGAKPVEVPAK-DYGHDLDAMLAAVT-PRTRLVFIANPNNPTGTYLPAEEVERFLAG 182

Query: 246 MP--ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           +P  +LVVLDEAY E+      E  +E V K  N++V RTFSK  GLAGLRVGYG  P  
Sbjct: 183 VPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPE 242

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP 360
           II+ L R +QP+NV+  A  AA AAL +  ++EK +    +    L + L ++  L   P
Sbjct: 243 IIDALNRVRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIP 301

Query: 361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           S  NFIL +   G DA +    L K GV++R      L   +R+++G  E     +  L
Sbjct: 302 SVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIGTEEENRRFLAAL 360

Length = 367

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score =  277 bits (710), Expect = 2e-90
 Identities = 140/363 (38%), Positives = 211/363 (58%), Gaps = 14/363 (3%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYI 125
           ++  L +L  YQP    E +  + G   E IVK+ +NENPYGP P+V+EA+   L    +
Sbjct: 3   MKEQLNQLSAYQPGKSIEEVKREYGL--EKIVKLASNENPYGPSPKVKEAIAAHLDELAL 60

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LR  +AK  G++ + +L G G DE+I +I R +L+PG   V   PTF+ Y  
Sbjct: 61  YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRH 120

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
           +A + GA V +VP K D   ++E +  A++ E+ K +++ +PNNP G+ +N E+LL  LE
Sbjct: 121 NAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNPNNPTGTYVNHEELLSFLE 178

Query: 246 -MP--ILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
            +P  +LVVLDEAY E+   E     +  ++K++NLIVLRTFSK  GLA LRVGYG    
Sbjct: 179 SVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
            +IE L  A+ P+N +  A+ AA AAL++  +L++  E   +  E+ +   K+   L  Y
Sbjct: 239 ELIEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYY 297

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           PS +NFI  +   G DA +L + L K G ++R          VR+++G  E  D ++E L
Sbjct: 298 PSQTNFIFVDT--GRDANELFEALLKKGYIVRSGAALGFPTGVRITIGLKEQNDKIIELL 355

Query: 420 MHL 422
             L
Sbjct: 356 KEL 358

Length = 359

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score =  242 bits (619), Expect = 1e-76
 Identities = 124/337 (36%), Positives = 183/337 (54%), Gaps = 12/337 (3%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQ-LKFPYI--YPDPESRRLRAALAKDSGL-ESDHI 149
              +VK+DA ENPY  P E+R  LG+ L    +  YPDP +  L+AAL    G+     +
Sbjct: 25  ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADV 84

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           L+G G+DELI L+      PG  ++   P F MY   A + G   V VP  +DF+L++  
Sbjct: 85  LLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPA 144

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MPILVVLDEAYTEFSGLESRMEW 268
           +  A+   +P  +FL  PNNP G++ +D D+ +I+E  P LVV+DEAY  F+G +S +  
Sbjct: 145 MLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAG-DSWLPR 203

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
           + +  NL+V+RT SK  GLAGLR+GY A   + I  L + + PYNV+V  +  A  AL++
Sbjct: 204 LARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEH 262

Query: 329 PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 388
              L+     L  ER RL   L  +P +  +PS +NFIL  V    DA  + D L   GV
Sbjct: 263 VDVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP---DAAAVFDGLKTRGV 319

Query: 389 MIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY 423
           ++++ +     L   +RV+VG PE     +  L    
Sbjct: 320 LVKNLSGMHPLLANCLRVTVGTPEENAQFLAALKAAL 356

Length = 356

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score =  239 bits (612), Expect = 7e-76
 Identities = 125/329 (37%), Positives = 195/329 (59%), Gaps = 10/329 (3%)

Query: 99  KIDANENPYGPPPEVREALGQLKFPY---IYPDPESRRLRAALAKDSGLESDHILVGCGA 155
           K+DANE P+  P EV + + ++       IYPDP + +LR  LA+   +   +I VG G+
Sbjct: 26  KMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGS 85

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215
           DE+I LIM   ++ GD ++   P+F MY   + + GA  + V  K D++ +V      +E
Sbjct: 86  DEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIE 145

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEMPI-LVVLDEAYTEFSGLESRMEWVKKHDN 274
           + +PK +FL +PNNP GS+I  ED++KI+E    +VV+DEAY EF G  + ++ + + +N
Sbjct: 146 KYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYG-NTIVDVINEFEN 204

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEK 334
           LIVLRT SK  GLAGLRVGY     +I++YL   K PYN++  ++V A   L+  +  E+
Sbjct: 205 LIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLRTGVLKER 264

Query: 335 VKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN 394
           V   ++ ERERL K L  +P +  YPS +NFIL +     DA  +   L + G+++R ++
Sbjct: 265 V-NYILNERERLIKELSKIPGIKVYPSKTNFILVKFK---DADYVYQGLLERGILVRDFS 320

Query: 395 N-KELKGYVRVSVGKPEHTDALMECLMHL 422
             + L+G +R++V   E  D L+  L  L
Sbjct: 321 KVEGLEGALRITVSSCEANDYLINGLKEL 349

Length = 351

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score =  235 bits (601), Expect = 3e-74
 Identities = 131/350 (37%), Positives = 204/350 (58%), Gaps = 31/350 (8%)

Query: 79  PILPFEVLSIQLGRKPEDIVKI--DANENPYGPPPEVREALGQL-------KFPYIYPDP 129
            I    V S +  R  E   +I  D NENP+  P E++E + +        ++P+I  DP
Sbjct: 1   MIRE-LVKSFKPYRVVEGNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDP 59

Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
               LR A+A+  GL++++I VG G+DELI  +++  L  G  IV  PPTF MY F A +
Sbjct: 60  ----LREAIAEFYGLDAENIAVGNGSDELISYLVK--LFEGKHIVITPPTFGMYSFYAKL 113

Query: 190 NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPIL 249
           NG  V+ VP K DF+++ E IA+  + +    +F+ SPNNP G++  +E++LK+LE    
Sbjct: 114 NGIPVIDVPLKEDFTIDGERIAE--KAKNASAVFICSPNNPTGNLQPEEEILKVLETGKP 171

Query: 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
           VVLDEAY EFSG +S +  + ++ NLI+LRTFSK  GLAG+R GY      II+ L+R K
Sbjct: 172 VVLDEAYAEFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIK 230

Query: 310 QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE 369
            P+++++        AL +   +E+  + +IKERER+ + L +      YPS +NF+L +
Sbjct: 231 PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY----AYPSDANFLLLK 286

Query: 370 VTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
                      D L + G+++R  + + L+G++RV+VGK E  D  ++ L
Sbjct: 287 -------LDAYDYLLENGIVVRKLSGR-LEGHIRVTVGKREENDEFIKAL 328

Length = 337

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  232 bits (593), Expect = 5e-73
 Identities = 108/348 (31%), Positives = 181/348 (52%), Gaps = 26/348 (7%)

Query: 98  VKIDANENPYGPPPEVREALGQL----KFPYIYPDPESRRLRAALAK------DSGLESD 147
           + +   E  + PPPEV EAL            YPDP    LR A+A+         +  +
Sbjct: 1   IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE 60

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207
            I+V  GA E + L++R +L+PGD+++   PT+  YE  A + GA VV VP   +    +
Sbjct: 61  EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLL 120

Query: 208 ELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG- 261
           +L   +A +  K K ++L +PNNP G+++++E+L ++ E+     IL++ DEAY E    
Sbjct: 121 DLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYD 180

Query: 262 --LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSV 316
                 +  +  ++ +IVLR+FSK  GL GLR+GY   P   +    +   PY     S 
Sbjct: 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPST 240

Query: 317 AAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGM 374
            ++ AA AAL +   +LE+++E   + R+ L + LK++  L    PS   F+  ++  G 
Sbjct: 241 LSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGD 300

Query: 375 DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHT-DALMECL 419
           D + L+  L + GV++R  +   +  +G+VR+S   PE   +  +E L
Sbjct: 301 DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERL 348

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score =  218 bits (557), Expect = 2e-67
 Identities = 127/364 (34%), Positives = 201/364 (55%), Gaps = 15/364 (4%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFP 123
           S  R+ +R L PY   L  E +  + G     I K+ +NENP GP P VR A   + +  
Sbjct: 8   SLARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELL 65

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            +YPDP+ R LR A+A  +G+ +D I++G G+++LI +I R VL PGD++V   P+F ++
Sbjct: 66  RLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLH 125

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
           E    + GA V +V    D   +++ +  AV    P+ +  ++P+NP GS +  + L ++
Sbjct: 126 EDYPTMMGARVERVTVTPDLGFDLDALCAAV-ARAPRMLMFSNPSNPVGSWLTADQLARV 184

Query: 244 LEM---PILVVLDEAYTEFS---GLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYG- 295
           L+      L+V+DEAY E++      S +  +K      IVLRTFSK  GLAGLRVGYG 
Sbjct: 185 LDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL 244

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355
                ++  L R + P+NV+ AA+ AA AAL +  +L K     + ERERL K L ++ +
Sbjct: 245 VSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMGY 304

Query: 356 LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDAL 415
               PS +NF+  +      A  + + L + GV+++ +     + ++RVS+G PE  D  
Sbjct: 305 -RIAPSRANFLFFDA--RRPASAVAEALLRQGVIVKPWKQPGFETFIRVSIGSPEENDHF 361

Query: 416 MECL 419
           +  L
Sbjct: 362 VAAL 365

Length = 371

>gnl|CDD|179559 PRK03321, PRK03321, putative aminotransferase; Provisional

 Score =  211 bits (539), Expect = 6e-65
 Identities = 117/358 (32%), Positives = 191/358 (53%), Gaps = 26/358 (7%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
           +R  L  +  Y P           G+     +K+ +NE P+GP P VR A+ +       
Sbjct: 5   LRPDLAGIPAYVP-----------GKTVPGAIKLSSNETPFGPLPSVRAAIARAAAGVNR 53

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LRAALA+  G+  +H+ VGCG+  L   +++    PGD+++    +F  Y  
Sbjct: 54  YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPI 113

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
              V GA  V+VP   D + +++ +A A+  ++ + IF+ +PNNP G+++   +L + L+
Sbjct: 114 LVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLD 172

Query: 246 -MP--ILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
            +P  +LVVLDEAY E+   +     +E V+ H N++VLRTFSK  GLAGLRVGY     
Sbjct: 173 AVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY 359
            +I  L +   P++V+  A+ AA A+L     L +  +A++ ER+R+   L+   +  P 
Sbjct: 233 EVIAALRKVAVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAGWTVP- 291

Query: 360 PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 417
           PS +NF+   +  G          A+ GV++R +  +     VRV++G PE  DA + 
Sbjct: 292 PSQANFVWLPL--GERTADFAAAAAEAGVVVRPFAGEG----VRVTIGAPEENDAFLR 343

Length = 352

>gnl|CDD|235115 PRK03317, PRK03317, histidinol-phosphate aminotransferase; Provisional

 Score =  200 bits (512), Expect = 1e-60
 Identities = 120/373 (32%), Positives = 190/373 (50%), Gaps = 44/373 (11%)

Query: 67  IRSHLRKLKPY-QPILPFEVLSIQLGRKPEDI-VKIDANENPYGPPPE--------VREA 116
           +R  LR   PY  P         QL     D+ V+++ NENPY P P         V EA
Sbjct: 10  LRDDLRGKSPYGAP---------QL-----DVPVRLNTNENPYPPSPALVADIAEAVAEA 55

Query: 117 LGQLKFPYIYPDPESRRLRAALA----KDSG--LESDHILVGCGADELIDLIMRCVLDPG 170
              L     YPD ++  LRA LA      +G  L  +++    G++E++  +++    PG
Sbjct: 56  AAGLNR---YPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPG 112

Query: 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
              +   P+++M+   A       V+ PR +DF+L+V+    A+   +P  +FLTSPNNP
Sbjct: 113 RTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNP 172

Query: 231 DGSIINDEDLLKILE-MPILVVLDEAYTEF--SGLESRMEWVKKHDNLIVLRTFSKRAGL 287
            G+ +  +D+  IL+  P +VV+DEAY EF  SG  S +  + ++  L+V RT SK    
Sbjct: 173 TGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAF 232

Query: 288 AGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERL 346
           AG R+GY A   ++++ L   + PY++S   + AA AAL++    L  V  AL  ER+R+
Sbjct: 233 AGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAAARAALRHADELLASV-AALRAERDRV 291

Query: 347 FKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV 406
              L+++      PS +NF+L    +  D   +   L   GV+IR      + G++RV++
Sbjct: 292 VAWLRELGL-RVAPSDANFVLFGRFA--DRHAVWQGLLDRGVLIRDVG---IPGWLRVTI 345

Query: 407 GKPEHTDALMECL 419
           G PE  DA +  L
Sbjct: 346 GTPEENDAFLAAL 358

Length = 368

>gnl|CDD|235053 PRK02610, PRK02610, histidinol-phosphate aminotransferase; Provisional

 Score =  199 bits (509), Expect = 3e-60
 Identities = 120/374 (32%), Positives = 190/374 (50%), Gaps = 34/374 (9%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY 124
            F+RS L +LK Y P  P       + +      ++D NE PY  PP++++ L  L    
Sbjct: 3   PFLRSDLAQLKAYHPH-PSGDADDAVIQLD----RLDTNEFPYDLPPDLKQKLAWLYQQG 57

Query: 125 I----YPDPESRRLRAALAK--------DSGLESDHILVGCGADELID--LIMRCVLDPG 170
           I    YPD     L+ A+A+         S +   +I VG G+DELI   LI  C+   G
Sbjct: 58  IESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEG 117

Query: 171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKP---KCIFLTS 226
             +V   PTF+MY   A   G  VV+V R    F +++     A+E+ +    + +F+  
Sbjct: 118 SILV-AEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176

Query: 227 PNNPDGSIINDEDL--LKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284
           PN+P G+ +   +L  L+ L   ILVV+DEAY EFS   + +  + +H N ++LRTFSK 
Sbjct: 177 PNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQ-TTLVGELAQHPNWVILRTFSKA 235

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKER 343
             LA  RVGY      +I  L + + PYN+   +++AA  AL++    L  + E L +ER
Sbjct: 236 FRLAAHRVGYAIGHPELIAVLEKVRLPYNLPSFSQLAAQLALEHRQELLAAIPEIL-QER 294

Query: 344 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR 403
           +RL++ L+++P L  +PS +NF+   ++       L   L   G ++RH       G +R
Sbjct: 295 DRLYQALQELPQLRVWPSAANFLYLRLSQDAALAALHQALKAQGTLVRH-----TGGGLR 349

Query: 404 VSVGKPEHTDALME 417
           +++G PE     +E
Sbjct: 350 ITIGTPEENQRTLE 363

Length = 374

>gnl|CDD|235440 PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional

 Score =  195 bits (499), Expect = 7e-59
 Identities = 113/363 (31%), Positives = 191/363 (52%), Gaps = 38/363 (10%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPED--IVKIDANENPYGPPPEVREAL-----GQLKFP 123
           +R+L+PY P           G +P+   ++K++ NENPY P P+V EA+       L+  
Sbjct: 9   VRQLEPYVP-----------GEQPKLAKLIKLNTNENPYPPSPKVLEAIRAALGDDLR-- 55

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            +YPDP +  LR A+A   GL+ + + VG G+DE++        +    ++    T++ Y
Sbjct: 56  -LYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFY 114

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDGSIINDEDLLK 242
              A + G    ++P   DFS++VE      +  +P   I   +PN P G  +   ++ +
Sbjct: 115 PVYAGLYGIPYEEIPLDDDFSIDVE------DYLRPNGGIIFPNPNAPTGIALPLAEIER 168

Query: 243 ILEMPI--LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
           IL      +VV+DEAY +F G ES +  + ++ NL+V++TFSK   LAGLRVG+      
Sbjct: 169 ILAANPDSVVVIDEAYVDF-GGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPE 227

Query: 301 IIEYLWRAK---QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN 357
           +IE L R K     Y +   A+  A AA+++  Y E+ +  +I  RERL + L+ + F  
Sbjct: 228 LIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALGF-E 286

Query: 358 PYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 416
             PS +NF+         DA +L   L + G+++RH+N   +  ++R+++G  E  +AL+
Sbjct: 287 VLPSKANFVF--ARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIGTDEEMEALV 344

Query: 417 ECL 419
           + L
Sbjct: 345 DAL 347

Length = 353

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score =  190 bits (485), Expect = 7e-57
 Identities = 114/369 (30%), Positives = 188/369 (50%), Gaps = 37/369 (10%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFP 123
               R ++R L PYQ        + +LG   +  V ++ANE P     +    L Q    
Sbjct: 6   TDLARENVRALTPYQS-------ARRLGGNGD--VWLNANEYPTAVEFQ----LTQQTLN 52

Query: 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTM 182
             YP+ + + +    A  +G++ + +LV  GADE I+L++R   +PG D I+ CPPT+ M
Sbjct: 53  R-YPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGM 111

Query: 183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
           Y   A   G  +  VP   ++ L++  IAD ++    K +++ SPNNP G++IN +DL  
Sbjct: 112 YSVSAETIGVEIRTVPTLDNWQLDLPAIADNLD--GVKVVYVCSPNNPTGNLINPQDLRT 169

Query: 243 ILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           +LE+     +VV DEAY EF    S   W+ ++ +L++LRT SK   LAGLR G   F L
Sbjct: 170 LLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCG---FTL 226

Query: 300 ---SIIEYLWRAKQPYNVSV-AAEVAACAALQNPIYLEKVKE---ALIKERERLFKLLKD 352
               +I  L +   PY +S   A++AA  AL  P  +  ++E    +   R+ L   LK+
Sbjct: 227 ANEEVINLLLKVIAPYPLSTPVADIAA-QALS-PQGIAAMRERVAEINANRQWLIAALKE 284

Query: 353 VPFL-NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKPE 410
           +P +   + S +N+IL   T    +  +   L   G+++R  N +  L   +R+++G  E
Sbjct: 285 IPCVEQVFDSETNYILARFT---ASSAVFKSLWDQGIILRDQNKQPGLSNCLRITIGTRE 341

Query: 411 HTDALMECL 419
               +++ L
Sbjct: 342 ECQRVIDAL 350

Length = 351

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score =  188 bits (478), Expect = 8e-56
 Identities = 116/353 (32%), Positives = 181/353 (51%), Gaps = 21/353 (5%)

Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPE----VREALGQLKFPYIYPDPES 131
            Y+     E ++ +LG  P+D+VK+ +NENP+GP P     +REA  ++   + YP    
Sbjct: 11  AYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERV---HSYPKASH 67

Query: 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
             L AALA    +  + + +  G D  +D + R +LDPGD ++   P F  Y   A  + 
Sbjct: 68  ADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHH 127

Query: 192 AAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP-- 247
             V + P  +  DF    + + DA + E+   ++LTSP+NP GS I  +++  + E    
Sbjct: 128 GEVREYPVSKADDFEQTADTVLDAYDGER--IVYLTSPHNPTGSEIPLDEVEALAERTDE 185

Query: 248 -ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306
             LVV+DEAY EF+   S +  V++ D++ VLRTFSK  GLAGLR+GY   P    +   
Sbjct: 186 ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYA 245

Query: 307 RAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFI 366
           R   P+  S  A  A  AAL +  ++E+  E     RE + + L D P    + S  NF+
Sbjct: 246 RVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREEL-DAP---TWESAGNFV 301

Query: 367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           L EV    DA  + +   + GV++R   +  L   +R++ G  E T+  +E L
Sbjct: 302 LAEVG---DASAVAEAAQERGVIVRDCTSFGLPECIRITCGTREETERAVEVL 351

Length = 357

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score =  187 bits (476), Expect = 9e-56
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 28/339 (8%)

Query: 89  QLGRKPEDIVKIDANENPYGPP-PEVR-EALGQLKFPYIYPDPESRRLRAALAKDSGLES 146
           + G  PED + +    NP GPP P +   A  +      YPDPE   LRAA A   GL +
Sbjct: 11  RYGIPPEDWLDLSTGINPLGPPVPPIPLSAWAR------YPDPEYDELRAAAAAYYGLPA 64

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
             +L   GA E I L+ R +L PG  +V   PT++ Y       G  VV++P       +
Sbjct: 65  ASVLPVNGAQEAIYLLPR-LLAPGRVLV-LAPTYSEYARAWRAAGHEVVELP-------D 115

Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAYTEFSGL 262
           ++ +  A+E      + + +PNNP G +I  E LL +          +V+DEA+ +F+  
Sbjct: 116 LDRLPAALEEAD--LLVVCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD 173

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
            S      +   L+VLR+ +K  GLAGLR+G+     ++I  L  A  P+ V+  A  A 
Sbjct: 174 ASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALIARLREALGPWTVNGPALAAG 233

Query: 323 CAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 382
            AAL +  +    +  L  ER RL  LL  +  L      + F+L       DA  L + 
Sbjct: 234 RAALADTAWQAATRARLAAERARLAALLARLGGLRVVGGTALFLLVRTP---DAAALHEA 290

Query: 383 LAKMGVMIRHY-NNKELKG-YVRVSVGKPEHTDALMECL 419
           LA+ G++IR + N   L   Y+R ++   E  D L+E L
Sbjct: 291 LARRGILIRDFDNFPGLDPRYLRFALPTDEENDRLLEAL 329

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  180 bits (459), Expect = 4e-53
 Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 34/354 (9%)

Query: 95  EDIVKIDANENPYG--PPPEVREALGQL-------KFPYIYPDPESRRLRAALAKDSGLE 145
            D + + +NE        P V +A            +      PE R   A     S + 
Sbjct: 1   TDKINLGSNEYLGDSGTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSPVL 60

Query: 146 ----SDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK 200
                  ++ G GA   I+ ++  + L+PGD I+   PT+  Y     + G  VV+ P  
Sbjct: 61  KLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYPLY 120

Query: 201 S--DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVL 252
           S  DF L+ + +  A++   E  K +  TSP+NP G++   E+L K+L++     IL+++
Sbjct: 121 SSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILLLV 180

Query: 253 DEAYTEF----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           DEAY  F        +    + +  NL+V+ +FSK  GLAG RVGY     ++I  L + 
Sbjct: 181 DEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKL 240

Query: 309 KQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN 364
            +P+  S   + AA AAL +P+     LE++++ + + R+ L   L+     +  PS + 
Sbjct: 241 ARPFYSSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGL-SVLPSQAG 299

Query: 365 FILCEVTSGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSVGKPEHTDALME 417
           F L        A  L   L +  GV +   ++    G++R++V     T+  +E
Sbjct: 300 FFLLTGLDPEAALALAQVLLEEVGVYVTPGSSFGGPGWLRITVAG--GTEEELE 351

Length = 357

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score =  178 bits (453), Expect = 3e-52
 Identities = 105/356 (29%), Positives = 165/356 (46%), Gaps = 27/356 (7%)

Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYP 127
           R  L  L PYQ        + ++G + +  + I+ANE+P+    E +  L +L     YP
Sbjct: 13  RPELLALTPYQS-------ARRIGGRGD--IWINANESPFNN--EYKLDLARLNR---YP 58

Query: 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFD 186
           + +   L  A +  +G+  + IL   GADE I+L++R   +PG D I    PT+ MY   
Sbjct: 59  ECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAIS 118

Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           A      V  +P  +D+ L ++ I      +  K +F+ +PNNP G++I+  D+ +++EM
Sbjct: 119 AETFNVGVKALPLTADYQLPLDYIEQL---DGAKLVFICNPNNPTGTVIDRADIEQLIEM 175

Query: 247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304
               +VV+DEAY EF    S  + +  + NL+VLRT SK   LAG R G+      +IE 
Sbjct: 176 TPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEI 235

Query: 305 LWRAKQPYNVSVAAEVAACAALQNPIYLEKVKE---ALIKERERLFKLLKDVPFLNPYPS 361
           L R   PY V +     A  AL +   L ++K     L  +  RL   L           
Sbjct: 236 LMRVIAPYPVPLPVSEIATQAL-SEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG 294

Query: 362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 417
             N++L +     D   +   L   G++ R Y +  L   +R S      TD L+ 
Sbjct: 295 NGNYVLAKFD---DVDAVFKALWDAGIVARAYKDPRLANCIRFSFSNRAETDKLIG 347

Length = 354

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score =  171 bits (436), Expect = 1e-49
 Identities = 98/349 (28%), Positives = 183/349 (52%), Gaps = 30/349 (8%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAALAKDSGL 144
           + G     I+   AN NP G P  +++A    L +L     YPDP+   LR  +A    L
Sbjct: 13  EKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVE---YPDPDYLELRKRIASFEQL 69

Query: 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSD 202
           + +++++G GA ELI  I++ V  P  K++   PTF  YE       A +   ++  +++
Sbjct: 70  DLENVILGNGATELIFNIVK-VTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETN 127

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTE 258
           F+ N  ++ +   +E+   +FL +PNNP G +I+ E++ KIL    +  I +++DEA+ +
Sbjct: 128 FAANEIVLEE--IKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMD 185

Query: 259 F---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNV 314
           F   +   S + +++   NLI++R F+K   + GLR+GYG     ++ E L + ++P+++
Sbjct: 186 FLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPWSI 245

Query: 315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM 374
           +  A++A    L +  Y++K  + + +E++ L+  L +   +  Y    NFI  ++    
Sbjct: 246 NTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKL---E 302

Query: 375 DAKKLKDDLAKMGVMIRHYNNKELKG----YVRVSVGKPEHTDALMECL 419
               L+ +L K G++IR  +N   +G    Y RV+V   E    L++ L
Sbjct: 303 KPIDLRKELLKKGILIRSCSN--YRGLDENYYRVAVKSREDNKKLLKAL 349

Length = 354

>gnl|CDD|181255 PRK08153, PRK08153, histidinol-phosphate aminotransferase; Provisional

 Score =  171 bits (435), Expect = 2e-49
 Identities = 119/354 (33%), Positives = 178/354 (50%), Gaps = 28/354 (7%)

Query: 82  PF---EVLSIQLGRKPEDIVKIDANENPYGPPPEV----REALGQLKFPYIYPDPESRRL 134
           PF   E L  Q GR      +I ANE+ +GP P V    REA  ++   + Y DPE+  L
Sbjct: 18  PFVGPETLERQRGRPFR--ARIGANESGFGPSPSVIAAMREAAAEI---WKYGDPENHDL 72

Query: 135 RAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP---PTFTMYEFDAAVNG 191
           R ALA   G+  ++I+VG G D L+ LI+R  ++PGD +V      PTF    +  A  G
Sbjct: 73  RHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFN---YHVAGFG 129

Query: 192 AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--I 248
             +V VP + D   +++ + DA  RE    ++L +P+NP GS     D++  +E +P   
Sbjct: 130 GRLVTVPYRDDRE-DLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETT 188

Query: 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           L+VLDEAY E +   +         N+I +RTFSK  GLAG RVGY       I+   + 
Sbjct: 189 LLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKV 248

Query: 309 KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 368
           +  + ++  A+ AA AAL++  YL +V   +   R+R+  + +    L P PS +NF+  
Sbjct: 249 RNHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG-LTPLPSATNFV-- 305

Query: 369 EVTSGMD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
            +  G D   A+ + D L    + +R      L   +RVS G  E  D   E L
Sbjct: 306 AIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCGPDEELDLFAEAL 359

Length = 369

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score =  167 bits (425), Expect = 4e-48
 Identities = 116/372 (31%), Positives = 186/372 (50%), Gaps = 44/372 (11%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDI---------VKIDANENPYGPPPEVREAL 117
           ++  L  L+PY+P           G+ PE +         VK+ +NENP+G  P V + L
Sbjct: 3   VKDQLSSLQPYKP-----------GKSPEQMKEVYGDHSFVKLASNENPFGCSPRVLDEL 51

Query: 118 GQLKFPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
            +    + +YPD  +  LR  +A    ++ + +L G G DE+I +I R VL  GD IV  
Sbjct: 52  QKSWLDHALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTA 111

Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
             TF  Y   A + G  V +V   +    +++ I+  V+    K +++ +PNNP G+ +N
Sbjct: 112 GATFPQYRHHAIIEGCEVKEVALNNGV-YDLDEISSVVD-NDTKIVWICNPNNPTGTYVN 169

Query: 237 DEDLLKILE---MPILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           D  L + +E      L+V+DEAY E+         +  ++KH N++VLRTFSK  GLA  
Sbjct: 170 DRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF 229

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE---KVKEALIKERERLF 347
           RVGY      +IE L   + P+NVS  A+ AA  A  +  ++E   +V    +++ E   
Sbjct: 230 RVGYAVGHEELIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFC 289

Query: 348 KLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG 407
           K   ++PF   Y S +NFI   V +G    ++ +  A  G +IR + N      VR++VG
Sbjct: 290 K-ENEIPF---YQSQTNFIFLPVENG---GEIYEACAHAGFIIRPFPNG-----VRITVG 337

Query: 408 KPEHTDALMECL 419
             E  + ++  L
Sbjct: 338 TREQNEGVISVL 349

Length = 366

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score =  167 bits (425), Expect = 4e-48
 Identities = 116/334 (34%), Positives = 166/334 (49%), Gaps = 22/334 (6%)

Query: 98  VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
           V ++ANE+ +  P +   +  +      YPDP+   LR+ALA   G   + +L+G G+DE
Sbjct: 34  VWLNANESAWANPADPDASTRR------YPDPQPPGLRSALAALYGCAPEQLLIGRGSDE 87

Query: 158 LIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSLNVELIADA 213
            IDL++R +  PG D ++  PP F MY   A +  A +V+VP       F  +V  I  A
Sbjct: 88  AIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAA 147

Query: 214 VEREKPKCIFLTSPNNPDGSII---NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVK 270
                 K +FL SP+NP GS I     E  L+ L+   LVV+DEAY EFS + S +  + 
Sbjct: 148 ALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLA 207

Query: 271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP- 329
           ++DNL VLRT SK   LA  R+G       +I  L R + PY V       A  AL  P 
Sbjct: 208 RYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSAPA 267

Query: 330 --IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKM 386
             +   +V E +  ERERL   L  +P +   YPS  NF+L       DA+     L   
Sbjct: 268 LAVTARRVAE-VRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---DAEAAFQALLAA 323

Query: 387 GVMIRHYNN-KELKGYVRVSVGKPEHTDALMECL 419
           GV++R       L   +R+++G PE  D ++  L
Sbjct: 324 GVVVRDQRAAPRLSDALRITLGTPEQNDRVLAAL 357

Length = 364

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  163 bits (414), Expect = 4e-46
 Identities = 95/360 (26%), Positives = 161/360 (44%), Gaps = 46/360 (12%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL----KFPYIYPDPESRRLRAALA----KDSG 143
           +  ED++ +   E  +  P  + EA  +        Y  P      LR A+A    +  G
Sbjct: 25  KGKEDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHY-TPSAGIPELREAIAEKYKRRYG 83

Query: 144 LE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPR 199
           L+    + I+V  GA E + L    +L+PGD+++  P P +  YE    + G   V VP 
Sbjct: 84  LDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVL-IPDPGYPSYEAAVKLAGGKPVPVPL 142

Query: 200 K---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVL 252
               + F  ++E +  A+   K K I L SPNNP G++ + E+L  I+E+     I+++ 
Sbjct: 143 DEEENGFKPDLEDLEAAI-TPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIIS 201

Query: 253 DEAYTEF--------SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIE 303
           DE Y E         S LE         D  I + +FSK  G+ G R+G+   P   +I 
Sbjct: 202 DEIYEELVYDGAEHPSILELAGAR----DRTITINSFSKTYGMTGWRIGWVVGPPEELIA 257

Query: 304 YLWRAKQ--PYNVSVAAEVAACAALQNPI---YLEKVKEALIKERERLFKLLKDVPFL-- 356
            L + K          A+ AA AAL  P     +E+++E   + R+ L + L ++  L  
Sbjct: 258 ALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSV 317

Query: 357 NPYPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRH---YNNKELKGYVRVSVGKPEHT 412
              P  + ++  ++   +D+++    L +  GV +     +     +GYVR+S+   E T
Sbjct: 318 VKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEET 377

Length = 393

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score =  150 bits (380), Expect = 2e-41
 Identities = 102/329 (31%), Positives = 156/329 (47%), Gaps = 27/329 (8%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLESDH 148
            E  V ++ANE P GP P  R+A  +      ++     D     LR   A   GL +DH
Sbjct: 42  AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELED----DLRTLFAAQEGLPADH 97

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           ++   G+ E ++  +     P   +V   PT+      A   GA V KVP ++D + +V+
Sbjct: 98  VMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVK 157

Query: 209 --LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP---ILVVLDEAYTEFSGL 262
             L AD         I++ +PNNP G++    D+  +L   P   +L+V DEAY  FS  
Sbjct: 158 AMLAADP----NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLV-DEAYIHFSDA 212

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
            S ++ V +  +LIVLRTFSK  G+AG+R+G  A    ++  L R      + V A  A 
Sbjct: 213 PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARFGHN-PLPVPAAAAG 271

Query: 323 CAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD 382
            A+L++P  + + +      RE     LK   +    PS +N  + +V     AK + D 
Sbjct: 272 LASLRDPKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQANCFMVDV--KRPAKAVADA 328

Query: 383 LAKMGVMI-RHYNNKELKGYVRVSVGKPE 410
           +AK GV I R +       +VRV+VG  E
Sbjct: 329 MAKQGVFIGRSW--PIWPNWVRVTVGSEE 355

Length = 370

>gnl|CDD|236009 PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated

 Score =  141 bits (358), Expect = 2e-38
 Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 19/339 (5%)

Query: 94  PEDIVKIDANENPYGPPPEVREALGQLKFPYI--YPDPESRRLRAALAKDSGLESDHILV 151
           P+ I+   A+ NP GPP  V  A+       +  YPDP+ R LR ALA+   L  + IL 
Sbjct: 21  PDAILDFSASINPLGPPESVIAAIQS-ALSALRHYPDPDYRELRLALAQHHQLPPEWILP 79

Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G GA EL+    R  L     +    P F  Y       GA V ++P   D       + 
Sbjct: 80  GNGAAELLTWAGR-ELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLR 138

Query: 212 DAVER--EKPKC-IFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEF---SGLESR 265
                    P   + L +P+NP G + + E +L +LE   LVV+DEA+ +F      +S 
Sbjct: 139 LQTLPPQLTPNDGLLLNNPHNPTGKLWSREAILPLLEQFALVVVDEAFMDFLPPDAEQSL 198

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEY-LWRAKQPYNVSVAAEVAAC 323
           +  + ++ NLI+LR+ +K   L GLR+GY  A P  +  +  WR   P+ V+  A  AA 
Sbjct: 199 IPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR--DPWPVNGLAAAAAI 256

Query: 324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL 383
           AAL +  + ++    L   RE LF+ L  +P L P PS +NF+L  V S   A +L++ L
Sbjct: 257 AALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLL--VQSQGSALQLQEKL 314

Query: 384 AKM-GVMIRH-YNNKEL-KGYVRVSVGKPEHTDALMECL 419
            +   ++IR   +  EL   Y RV+V        L+E L
Sbjct: 315 LQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEAL 353

Length = 360

>gnl|CDD|173269 PRK14808, PRK14808, histidinol-phosphate aminotransferase; Provisional

 Score =  129 bits (326), Expect = 4e-34
 Identities = 98/331 (29%), Positives = 167/331 (50%), Gaps = 26/331 (7%)

Query: 96  DIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPE-SRRLRAALAKDSGLESDH 148
           D   +  NENP+  P ++ + +        L+  Y  PD E   ++ + L  D  L  ++
Sbjct: 20  DRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDF-LSKNN 78

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           + VG GADE+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +   
Sbjct: 79  VSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI--- 131

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW 268
                V   +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++ 
Sbjct: 132 ---PEVNVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDL 187

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328
           +KK++NL V+RTFSK   LA  R+GY       I+   R + P+NVS  +++ A  AL +
Sbjct: 188 LKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALDH 247

Query: 329 PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV 388
               E+  + +++ERER+   L+++ +     S  NF+        + ++L + L    +
Sbjct: 248 REIFEERTKFIVEERERMKSALREMGY-RITDSRGNFVFI-FMEKEEKERLLEHLRAKNI 305

Query: 389 MIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
            +R +        VR+++GK E  D +++ L
Sbjct: 306 AVRSFREG-----VRITIGKREENDMILKEL 331

Length = 335

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score =  122 bits (309), Expect = 3e-31
 Identities = 95/345 (27%), Positives = 171/345 (49%), Gaps = 37/345 (10%)

Query: 93  KPEDIVKIDANENPYGPPPEVREAL--GQLKFPY-IYPDPES-RRLRAALAKDSGLESDH 148
           K ++++ +  N N  GP  EVREA+     +  Y  YP PE    LR  + KD GL+ D 
Sbjct: 26  KDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDE 85

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSL 205
            L+  GA E + L+MR  L PGD  V   P + + +  A+  GA V++VP  S   ++ L
Sbjct: 86  ALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKL 145

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG 261
             EL+ + ++ E  + I+L  P NP GS   +E++ +  E+       ++ D  Y +F+ 
Sbjct: 146 TPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFA- 203

Query: 262 LESRMEWVKKH--------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QPY 312
                   ++H        ++ +   +FSK  G+AGLR+G       +IE +        
Sbjct: 204 --------REHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDL 255

Query: 313 NVSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFILCE 369
             +V A+ AA A L+    ++++++    K ++ + + + ++   FL  YPS+ N ++ +
Sbjct: 256 GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVID 315

Query: 370 VT-SGMDAKKLKDDLAKMGVMIRH--YNNKEL-KGYVRVSVGKPE 410
           ++ +G+D + L + L +  + +R   Y +K     Y+RVS   P 
Sbjct: 316 ISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSIPR 360

Length = 380

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score =  114 bits (288), Expect = 1e-28
 Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 27/351 (7%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESD 147
            LG  P+ ++   AN NP G P  ++ A+   L     YPD E R L  ALA+   + + 
Sbjct: 14  VLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPAS 73

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSL 205
            IL G G  E I  ++   L P   ++   P F  Y       G  + +   +    + L
Sbjct: 74  WILAGNGETESIFAVVS-GLKPRRAMI-VTPGFAEYRRALQQVGCEIRRYSLREADGWQL 131

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTEFS 260
             + I +A+  +   C+FL +PNNP G ++ +  LL+ +      + I ++LDEA+ +F 
Sbjct: 132 T-DAILEALTPD-LDCLFLCTPNNPTG-LLPERQLLQAIAERCKSLNIALILDEAFIDFI 188

Query: 261 GLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPYNVSVAA 318
             E+     +  + +L VLR+ +K   + GLR+GY      + +  + R + P++++  A
Sbjct: 189 PDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPWSINAFA 248

Query: 319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFIL--CEVTSGMDA 376
            +A    LQ+  Y +   + L +E  R ++ L  +P L  +P  +N++   CE    +D 
Sbjct: 249 ALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCE-RPDID- 306

Query: 377 KKLKDDLAKMGVMIRHYNNKE-LKG-YVRVSVGKPEH----TDALMECLMH 421
             L+  L    ++IR   N   L   Y RV++           AL   L  
Sbjct: 307 --LQRALLTQRILIRSCANYPGLDSRYYRVAIRSAAENERLLAALRNVLTG 355

Length = 356

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score =  102 bits (256), Expect = 2e-24
 Identities = 93/344 (27%), Positives = 148/344 (43%), Gaps = 48/344 (13%)

Query: 91  GRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHIL 150
           G + E ++   A+ NPY PP  + E   + K            L    +K  G   + I+
Sbjct: 4   GIREEGLIDFSASVNPY-PPEWLDEMFERAK-EISGRYTYYEWLEEEFSKLFG---EPIV 58

Query: 151 VGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           +  G  E + LI    L   D+ V  P  T+  YE  A    A ++K    +D     EL
Sbjct: 59  ITAGITEALYLIGILALR--DRKVIIPRHTYGEYERVARFFAARIIK--GPNDPEKLEEL 114

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEAYTEFSGLESR 265
           +      E+   +F  +PNNPDG   N ++L  +L+       L++LDEA+ +F      
Sbjct: 115 V------ERNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDF------ 162

Query: 266 MEWVKKHD-----NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              VKK +     N+I LRTF+K  GL G+RVGY        E     + P+++      
Sbjct: 163 ---VKKPESPEGENIIKLRTFTKSYGLPGIRVGY---VKGFEEAFRSVRMPWSIGSTGYA 216

Query: 321 AACAALQNPIY-LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 379
                +++    L K    + +E+ER  K L          S +NF + +V    DA+K 
Sbjct: 217 FLEFLIEDDFEHLRKTMPLIWREKERFEKALY-------VKSDANFFIKDVG---DAEKF 266

Query: 380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY 423
            + L + G+++R   +  L GY+R SV   E  + L+  L    
Sbjct: 267 VEFLKRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALREWR 310

Length = 311

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score = 98.3 bits (246), Expect = 1e-22
 Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 40/226 (17%)

Query: 105 NPYGPPPE-VREALGQL-------KFPYI----YPDPESRRLRAALAK------DSGLES 146
           NP  PPP  V+EAL +L          Y+    YP+     +R A+A+       + L +
Sbjct: 42  NPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPE-----VREAIAESLNRRFGTPLTA 96

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSL 205
           DHI++ CGA   +++ ++ +L+PGD+++   P F  Y F    +G  +V VP     F  
Sbjct: 97  DHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQP 156

Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----------PILVVLDEA 255
           +++ +  A+   K K + + SPNNP G + ++E L  +  +          PI ++ DE 
Sbjct: 157 DLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEP 215

Query: 256 YTE--FSGLESRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFP 298
           Y E  + G E  + ++ K+ DN IV+ +FSK   L G R+GY A  
Sbjct: 216 YREIVYDGAE--VPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN 259

Length = 394

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 95.6 bits (238), Expect = 1e-21
 Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 28/278 (10%)

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRKSDFSLNV 207
           I+V  GA E ID+  R +L+PG +++   P +  YE    + GA  V +  R + F L  
Sbjct: 92  IIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTA 151

Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF---S 260
           E + +A+  EK +C+ L  P+NP G  ++ E+L  I ++     I V+ DE Y+E     
Sbjct: 152 EALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ 210

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              S   + +  +  IV+   SK   + G R+G+   P  + +++ +  Q YNV+ A+ +
Sbjct: 211 PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQ-YNVTCASSI 269

Query: 321 ---AACAALQNPI-YLEKVKEALIKERERLFKLLK--DVPFLNP------YPSYSNFILC 368
              AA  AL       + ++    K R+ ++  L    +    P      +PS  +F + 
Sbjct: 270 SQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMS 329

Query: 369 EVTSGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVS 405
                +D  + +  LA + G     Y     +GYVR+S
Sbjct: 330 SFDFALDLVE-EAGLAVVPGSAFSEYG----EGYVRLS 362

Length = 387

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score = 94.4 bits (236), Expect = 3e-21
 Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 46/287 (16%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE I +     +D  +  Y P    PE+REA+                  A L +D+GL+
Sbjct: 46  PEHIKEAAIEALDDGKTKYTPAAGIPELREAI-----------------AAKLKRDNGLD 88

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD- 202
                ++V  GA + +      +LDPGD+++   P +  Y     + G   V VP   + 
Sbjct: 89  YDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEEN 148

Query: 203 -FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAY- 256
            F L VE +  A+   K K + L SP+NP G++ + E+L  I    +E  I V+ DE Y 
Sbjct: 149 GFKLTVEQLEAAIT-PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE 207

Query: 257 ------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AK 309
                  EF+ + S +   +  D  I +  FSK   + G R+GY A P  +I+ + +   
Sbjct: 208 KLVYDGAEFTSIAS-LSP-ELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQS 265

Query: 310 QPY-NVSVAAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVP 354
               N +  A+ AA AAL  P   +E++++A  + R+ +   L ++P
Sbjct: 266 HSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIP 312

Length = 393

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score = 94.7 bits (236), Expect = 4e-21
 Identities = 88/338 (26%), Positives = 154/338 (45%), Gaps = 59/338 (17%)

Query: 106 PYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162
            YGP    PE+REA+             +  L A        E + I++  GA + +DL+
Sbjct: 127 QYGPTAGLPELREAI-------------AAYLLARRG--ISCEPEQIVITSGAQQALDLL 171

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVERE 217
           +R +LDPGD ++   PT     +  A+      GA V+ VP   +  ++ E + +A+ + 
Sbjct: 172 LRLLLDPGDTVLVEDPT-----YPGALQALEALGARVIPVPV-DEDGIDPEALEEALAQW 225

Query: 218 KPKCIFLTSPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK 271
           KPK +++T P   NP G  ++ E    +L +     +L++ D+ Y E          +K 
Sbjct: 226 KPKAVYVT-PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKA 284

Query: 272 HD---NLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAA 325
            D    +I L +FSK   LA GLR+GY   P  +IE L R KQ      S  ++ A  A 
Sbjct: 285 LDAPGRVIYLGSFSK--TLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAF 342

Query: 326 LQNPIY---LEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAK 377
           L +  Y   L +++    + R+ L + L +  +L    +++      F+  E+  G+DA+
Sbjct: 343 LLSGHYDRHLRRLRREYARRRDALLEALAE--YLPELATWTRPEGGLFLWLELPEGIDAR 400

Query: 378 KLKDDLAKMGVMIR-----HYNNKELKGYVRVSVGKPE 410
           +L     + GV++         + + +  +R+S   P 
Sbjct: 401 ELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPS 438

Length = 459

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score = 89.0 bits (221), Expect = 2e-19
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 22/198 (11%)

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP----RKSD 202
           D I+V  GA + +D+ MR +++PGD+++   P+F  Y     V  A  V VP     +++
Sbjct: 82  DEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYA--PLVTLAGGVPVPVATTLENE 139

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE 258
           F +    I +A    K K I L SPNNP G+++N  +L +I  +     ++V+ DE Y E
Sbjct: 140 FKVQPAQI-EAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAE 198

Query: 259 FSGLE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
            +  E     + ++ +++    I++  FSK   + G R+G+ A P+   E + +  Q Y+
Sbjct: 199 LTYDEAYTSFASIKGMRERT--ILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQ-YS 255

Query: 314 VSVA---AEVAACAALQN 328
           +  A   A+ AA  AL+ 
Sbjct: 256 MMCAPTMAQFAALEALRA 273

Length = 378

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score = 83.6 bits (207), Expect = 1e-17
 Identities = 89/336 (26%), Positives = 148/336 (44%), Gaps = 54/336 (16%)

Query: 100 IDANENPYGPP---PEVREALGQL---KFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
           IDAN++ Y       E+R+A       K+   Y  PE                + ILV  
Sbjct: 56  IDANQSHYTGMAGLLELRQAAADFVKEKYNLDY-APE----------------NEILVTI 98

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRKSDFSLNVELIAD 212
           GA E +   +  +L+PGDK++   P +  YE    + GA +V++   ++DF L  E++  
Sbjct: 99  GATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEK 158

Query: 213 AV--EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--- 263
           A+  + +K K + L  P NP G   + E +  + ++     I V+ DE Y+E +      
Sbjct: 159 AILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218

Query: 264 -SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA---AE 319
            S  E++   D  I++   SK   + G R+G    P      L ++ Q Y V+ A   A+
Sbjct: 219 VSIAEYLP--DQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQ-YLVTAATTMAQ 275

Query: 320 VAACAALQNPIY-LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDA 376
            AA  AL N       +K+  IK R+ + + + D+ F    P  + +I  ++ +G   D+
Sbjct: 276 FAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDS 335

Query: 377 KKLKDDLAKM-------GVMIRHYNNKELKGYVRVS 405
            K   D A+        G     Y     +GYVR+S
Sbjct: 336 FKFLQDFARKKAVAFIPGAAFGPYG----EGYVRLS 367

Length = 391

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score = 81.1 bits (200), Expect = 1e-16
 Identities = 79/341 (23%), Positives = 164/341 (48%), Gaps = 28/341 (8%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALAK------DS 142
            K E+++ +   E  +  P  ++EA  +     + +  P+     LR A+A+        
Sbjct: 30  SKMENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGV 89

Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-- 200
            ++ D+++V  GA E   L    +L+ GD+++   P F  Y  DA +  A  +++P +  
Sbjct: 90  DVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREE 149

Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
           ++F  + + + + + + + + I +  PNNP G+ ++ E    I ++     I ++ DE Y
Sbjct: 150 NEFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPY 208

Query: 257 TEFSGLESRMEWVKKH--DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPY 312
             F    ++   + K+  DN I+  +FSK   + G R+G+   P  +I+ + +  A    
Sbjct: 209 EHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIG 268

Query: 313 NVSVAAEVAACAALQNPIYLEKVKE--ALIKERERL-FKLLKDVPFLNPY-PSYSNFILC 368
           NV+   ++A   AL++    + V+E      ER +L  K LK++P +  + P  + ++  
Sbjct: 269 NVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFA 328

Query: 369 EVT-SGMDAKKLKDDL---AKMGVMIRHYNNKELKGYVRVS 405
            +  +GM ++   + L   A++ V+      K  +GY+R+S
Sbjct: 329 NIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS 369

Length = 391

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score = 80.9 bits (200), Expect = 1e-16
 Identities = 86/343 (25%), Positives = 147/343 (42%), Gaps = 58/343 (16%)

Query: 107 YGPPPEVREALGQLKFPYIYPDPESRRLRAA-------------LAKDSGLE---SDHIL 150
           Y PPPE  EAL          +PE+ + +A              L +D+G+E      I+
Sbjct: 39  YPPPPEAIEALNNF-----LANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIV 93

Query: 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELI 210
           V  G++      +  + DPGD+I+   P +  +E    + G   + VP   ++ L  E I
Sbjct: 94  VTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAI 153

Query: 211 ADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFS--GLE- 263
             A+   K + I   SPNNP G +  +  L  +     E  I  + DEAY  F+  G++ 
Sbjct: 154 EQAIT-PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH 212

Query: 264 -SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-----PYNVSVA 317
            S        ++ I L + SK  G A  R+GY   P+ ++E + + +      P  VS  
Sbjct: 213 FSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVS-- 270

Query: 318 AEVAACAALQ-NPIYLEKVKEALIKERERLFKLL---KDVPFLNPYPSYSNFILCEVTSG 373
            + AA  ALQ    Y ++    + + R+ L K L   +D   L+P  + + +   +V + 
Sbjct: 271 -QYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP-ANGAFYCFLKVNTD 328

Query: 374 MDAKKLKDDLAKMGVMIRHYNNKELKG---------YVRVSVG 407
           ++  +L      +  +IR Y    + G         Y+R++ G
Sbjct: 329 LNDFEL------VKQLIREYRVAVIPGTTFGMKNGCYLRIAYG 365

Length = 389

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score = 78.4 bits (194), Expect = 6e-16
 Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 23/215 (10%)

Query: 134 LRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
           LR ALA+            + I V     + + L  + ++ PGD++V   P +       
Sbjct: 66  LREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAP 125

Query: 188 AVNGAAVVKVP---RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
            + GA VV VP       ++L+++ +  A+   + + +F+ SPNNP G   + +DL  IL
Sbjct: 126 KILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRAIL 184

Query: 245 EMP----ILVVLDEAYTEFS-GLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
                  + +V DE Y         R    ++  +  D +I + +FSK   + G R+G+ 
Sbjct: 185 AHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL 244

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEV---AACAALQ 327
             P ++ + L +  + YN S  A+    AA AAL 
Sbjct: 245 VAPPALGQVLEKLIE-YNTSCVAQFVQRAAVAALD 278

Length = 382

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score = 78.0 bits (193), Expect = 1e-15
 Identities = 69/249 (27%), Positives = 108/249 (43%), Gaps = 38/249 (15%)

Query: 134 LRAALAK-----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
           LR A AK        +E D IL+  G  E I   M  + DPGD+I+   P +  Y   A 
Sbjct: 71  LREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFAT 130

Query: 189 VNGAAVVKVPRKSD--FSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
             G  +V V  K +  F L + E I   +   K K I +++P NP G +   E+L  + E
Sbjct: 131 SAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEMLAE 189

Query: 246 MP----ILVVLDEAYTEF--SGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
           +     + ++ DE Y EF   GL+  S +      D +I++ + SKR    G R+G    
Sbjct: 190 IAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG---- 245

Query: 298 PLSIIEYLWRAKQPYN-----------VSVAAEVAACAALQNP-IYLEKVKEALIKERER 345
              +I    + K+                   ++ A A L  P  Y ++V+E   K R+ 
Sbjct: 246 --CLIS---KNKELIAAAMKLCQARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDI 300

Query: 346 LFKLLKDVP 354
           L++ L  +P
Sbjct: 301 LYEELNKIP 309

Length = 397

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score = 76.4 bits (188), Expect = 4e-15
 Identities = 77/312 (24%), Positives = 141/312 (45%), Gaps = 41/312 (13%)

Query: 134 LRAALA----KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           L +A+A    KD+GL  D    + V  G  E I   +  +++PGD+++   P +  YE  
Sbjct: 96  LNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEAT 155

Query: 187 AAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI-- 243
            ++ GA +  V  R  DF++  + +  A    K + I + +P+NP G +   E+L  I  
Sbjct: 156 LSMAGAKIKTVTLRPPDFAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIAS 214

Query: 244 --LEMPILVVLDEAYTE--FSGLESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
              E  +L   DE Y +  F G    M  +   ++  + + +  K   L G ++G+   P
Sbjct: 215 LCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP 274

Query: 299 LSIIEYLWRAKQPYN-----VSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKD 352
             +    W  +Q ++      +   + AA AAL+ P  Y E++K     +++ L + LK+
Sbjct: 275 PHLT---WGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE 331

Query: 353 VPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-------KMGVM-----IRHYNNKELKG 400
           V F     S + F++ + T        ++D+A       ++GV      + + N ++ K 
Sbjct: 332 VGFKVYPSSGTYFVMVDHT----PFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKN 387

Query: 401 YVRVSVGKPEHT 412
            VR +  K E T
Sbjct: 388 LVRFAFCKDEET 399

Length = 413

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score = 75.9 bits (187), Expect = 5e-15
 Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 30/281 (10%)

Query: 128 DPESRR-LRAALAKDSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           D E    +    +K+  L  + + I+   GA   + L ++ +LDPGD+++   P FT Y+
Sbjct: 68  DVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYK 127

Query: 185 FDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242
               + G   + +    +  F +NV+ +   +   K K I L SPNNP G++ + E L +
Sbjct: 128 DQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEE 186

Query: 243 ILEMPI----LVVLDEAYTEFSGLE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           I ++ I     ++ DE Y  FS  E     + +  +   +  I   +FSK   + G R+G
Sbjct: 187 IAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMP--ERTITFGSFSKDFAMTGWRIG 244

Query: 294 YGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKE-RERLF--- 347
           Y   P  IIE      +   ++    ++ AA  AL++    + +   + +E ++RL    
Sbjct: 245 YVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKH---RDTIVPLIKEEFQKRLEYAY 301

Query: 348 KLLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDLAK 385
           K ++ +P L+ +P   S   FI  + T G+ + +  + L K
Sbjct: 302 KRIESIPNLSLHPPKGSIYAFINIKKT-GLSSVEFCEKLLK 341

Length = 384

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 72.0 bits (177), Expect = 8e-14
 Identities = 91/345 (26%), Positives = 139/345 (40%), Gaps = 65/345 (18%)

Query: 108 GPPPEVRE----ALGQLKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLI 162
            PP  +RE     LG L     YP  E  RR RAA+A   G   D +L+  GA E   L+
Sbjct: 35  TPPEWLRERLAARLGDLA---AYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALL 91

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA--AVVKVPRKSDFSLNVELI---ADAVERE 217
            R  L P    V   P+FT  E +AA+  A   V +V     F L+   +   AD V   
Sbjct: 92  AR--LRPRRAAV-VHPSFT--EPEAALRAAGIPVHRVVLDPPFRLDPAAVPDDADLV--- 143

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWV-------- 269
                 + +P NP   +   E LL +     ++V+DEA+          + V        
Sbjct: 144 -----VIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAF---------ADAVPGEPESLA 189

Query: 270 -KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA--EVAACAAL 326
                 ++VLR+ +K   LAGLRVGY      ++  L R +  + V       +AAC A 
Sbjct: 190 GDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAP 249

Query: 327 QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM 386
           +           L  +R  +   L+ V      P+ + F+L  V    DA+ L+  L + 
Sbjct: 250 RAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVP---DAELLRKRLRER 306

Query: 387 GVMIRHYNNKELKG---------YVRVSVGKPEHTDALMECLMHL 422
           G+ +R       +G         Y+R++V        L++ L  +
Sbjct: 307 GIAVR-------RGDTFPGLDPDYLRLAVRPRAEVPVLVQALAEI 344

Length = 349

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 72.1 bits (177), Expect = 8e-14
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 20/272 (7%)

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA 213
           D L+ L M    +PGD I+   P +T YE    + GA    +P K  +DF  ++ELI + 
Sbjct: 104 DGLVHLPM-VYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEE 162

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTE--FSGLE--S 264
           +  +K K + L  P NP  ++   ED  K +     +  I+VV D AY E  F G +  S
Sbjct: 163 I-ADKAKMMILNFPGNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPIS 220

Query: 265 RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA 322
            +      +  + + + SK   LAG R+GY      I+  L + K    Y V +  + AA
Sbjct: 221 FLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAA 280

Query: 323 CAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL-K 380
           CAAL+N   + EK +    + R+ L    +   +    P+ S F+  E+  G  +     
Sbjct: 281 CAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAY 340

Query: 381 DDLAKMGVMIR--HYNNKELKGYVRVSVGKPE 410
             + +  V++   H      +G+VR+++ + E
Sbjct: 341 ALMDRANVVVTPGHAFGPHGEGFVRIALVQDE 372

Length = 399

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 73/269 (27%), Positives = 108/269 (40%), Gaps = 53/269 (19%)

Query: 110 PPEVREALGQLK----FPYIYPDPESRRLRAALA-------KDSGLESDHILVGCGADEL 158
           PP +R AL        +P  +  PE   LR A+           GL+   +L   G  EL
Sbjct: 36  PPLIRAALAAAADAPGYPQTWGTPE---LREAIVDWLERRRGVPGLDPTAVLPVIGTKEL 92

Query: 159 IDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217
           +  +   + L PGD +V     +  YE  A + GA  V                  ++  
Sbjct: 93  VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADD-----------PTELDPV 141

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWV---- 269
            P  I+L SP NP G +++ ++L  I+    E   +V  DE Y E  G E R   +    
Sbjct: 142 GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLEL-GWEGRPVSILDPR 200

Query: 270 ---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ------PYNVSVAAEV 320
                H  L+ + + SKR+ LAG R G+ A   +++  L   ++      P  V  AA V
Sbjct: 201 VCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPV-QAAMV 259

Query: 321 AACA-----ALQNPIYL---EKVKEALIK 341
           AA       A Q   Y     ++K AL K
Sbjct: 260 AALGDDGHVAEQKARYAARRAQLKPALEK 288

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 69.7 bits (171), Expect = 6e-13
 Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 23/276 (8%)

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIA 211
           G+ E I  I    ++PGD ++   P + +Y       G    ++P K  + F  + + I 
Sbjct: 99  GSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIP 158

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE-- 263
           + + + K K +F+  PNNP G++   +   +++E      I+V  D AY+E  F G +  
Sbjct: 159 EDIAK-KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAP 217

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV--AAEVA 321
           S +E     D  I   + SK   + G R+G       +I  L + K   +  V  A + A
Sbjct: 218 SFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYA 277

Query: 322 ACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD----A 376
           A AAL  P   ++++++   + R+ L + LK +      P  + ++   V  G      A
Sbjct: 278 AIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPEGYTSAEFA 337

Query: 377 KKLKDDLAKMGVMIRHYN--NKELKGYVRVSVGKPE 410
            +L   L + GV++       +  +GY+R+S+  P+
Sbjct: 338 ARL---LEETGVVVTPGVGFGEYGEGYIRISLTVPD 370

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score = 69.3 bits (170), Expect = 7e-13
 Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 50/295 (16%)

Query: 110 PPEVREAL------GQLKFPYIYPDPESRRLRAALAKDS----GLESD---HILVGCGAD 156
           PPE+ EA       G  ++P   P P    LRAA+A       GLE D    +LV  GA 
Sbjct: 39  PPEMLEAAQEAIAGGVNQYP---PGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGAT 95

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSLNVELIADA 213
           E I   +  +++PGD+++   P +  Y    A+ GA  V VP   D   F+L+++ +  A
Sbjct: 96  EAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAA 155

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRME 267
           V   + + + + SP+NP G+++   +L  I E+ +    LV+ DE Y    F G      
Sbjct: 156 VT-PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGAR---- 210

Query: 268 WVKKHDNLIVL-----RTFS-----KRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA 317
               H  L  L     RT +     K   + G ++G+   P  +I  +  AKQ Y   V 
Sbjct: 211 ----HLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQ-YLTYVG 265

Query: 318 A---EVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 368
               + A   AL +   ++  ++++L  +R+RL   L +  F   + S   + LC
Sbjct: 266 GAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGF-EVHDSAGTYFLC 319

Length = 387

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 68.4 bits (167), Expect = 1e-12
 Identities = 83/330 (25%), Positives = 152/330 (46%), Gaps = 44/330 (13%)

Query: 110 PPEVREALGQLKFPYI--YPDPESRR-LRAALA----KDSGLESD---HILVGCGADELI 159
           PP +R+AL     P +  YP     + LR A++    +  G++ D    +L   G+ E I
Sbjct: 15  PPFIRKALID-AVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAI 73

Query: 160 DLIMRCVLDPGD---KIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAV 214
                  +DP +   +++   P + +YE  A   G     V   ++  F L +E +  ++
Sbjct: 74  FHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSI 133

Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF-------SGLE 263
             E  K +++  P+NP G+      L +      E  I++  DE YTE        S LE
Sbjct: 134 LEET-KIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALE 192

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA----E 319
             +E      N++   + SKR+G+ G R G+ A    +I +L R  +  N  VA+    +
Sbjct: 193 VGIE------NVLAFHSLSKRSGMTGYRSGFVAGDEKLISFL-RKLRA-NFGVASPDFVQ 244

Query: 320 VAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 379
            AA AA  +  ++ + ++   ++R+   +    V     YP  + ++  +V SG+DAK  
Sbjct: 245 AAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDY 304

Query: 380 KDDLAKMGVMI---RHYNNKELKGYVRVSV 406
              L + G+++    ++ + E +GYVRV++
Sbjct: 305 ALRLLENGIVVAPGENFGSGE-EGYVRVAL 333

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 67.4 bits (165), Expect = 3e-12
 Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 44/292 (15%)

Query: 71  LRKLKPYQPILPFEVLSIQL-GRKP---EDIVKIDANENPYGPPPEV-----REALGQL- 120
           L +L+PY    PFE L+  L G  P   +  + +   E P  P P       RE L  L 
Sbjct: 4   LSRLQPY----PFEKLAALLAGVTPPASKPPIALSIGE-PKHPTPAFVLEALRENLHGLS 58

Query: 121 KFPYIYPDPESRRLRAALAK-----DSGLESD-HILVGCGADELIDLIMRCVLDPGDK-I 173
            +P     PE R+  A   +      +G++ + H+L   G  E +    + V++PG   +
Sbjct: 59  TYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPL 118

Query: 174 VDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNN 229
           V  P P + +YE  A + GA    +   ++     +   DAV      + + +F+ SP N
Sbjct: 119 VVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDF--DAVPESVWRRCQLLFVCSPGN 176

Query: 230 PDGSIINDEDLLKILEMP----ILVVLDEAYTEF--------SGLESRMEWVKKHD--NL 275
           P G++++ + L K++E+      ++  DE Y+E         +GL      + + D    
Sbjct: 177 PTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRC 236

Query: 276 IVLRTFSKRAGLAGLRVGYGAFPLSIIE--YLWRAKQPYNVSVAAEVAACAA 325
           +V  + SKR+ L GLR G+ A    I++    +R      + +  ++A+ AA
Sbjct: 237 LVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAA 288

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score = 67.1 bits (164), Expect = 4e-12
 Identities = 86/332 (25%), Positives = 137/332 (41%), Gaps = 47/332 (14%)

Query: 96  DIVKIDANENPYGPPPEVREALG---QLKFPYIYPDPESRRLRAALAK------DSGLES 146
           D VK D     + PP  ++EA     +    Y  P      LR A+ K         +  
Sbjct: 39  DPVKFD-----FQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP 93

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           D + V     E + LI   +LDPGD+I+   P++  Y       G     VP        
Sbjct: 94  DDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGG----VPV---EYRT 146

Query: 207 VEL------IADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDE 254
           +E       I D  ++  EK K I + +PNNP G++   + L +IL    E  + V+ DE
Sbjct: 147 IEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDE 206

Query: 255 AYTE--FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLW 306
            Y    + G       + K   +IV+   SK     G R+GY  F         + E + 
Sbjct: 207 IYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAID 266

Query: 307 R-AKQPYNVSVAAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVPFL---NPYPS 361
           + A+     +  A+ AA A L  P+ YLE+  + L + R+ ++K L ++P +    P  +
Sbjct: 267 KLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGA 326

Query: 362 YSNFILCEVTSGMDAKK-LKDDLAKMGVMIRH 392
           +  F   E     D K+ + D L +  V+  H
Sbjct: 327 FYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVH 358

Length = 398

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 63.8 bits (156), Expect = 4e-11
 Identities = 86/341 (25%), Positives = 139/341 (40%), Gaps = 52/341 (15%)

Query: 110 PPEVREALGQ----LKFPYIYPDPESRRLRAALAK------DSGLESDHILVGCGADELI 159
           PPE+ EAL +      F Y Y   E   L AA+A          ++ + I+   G    I
Sbjct: 40  PPEIIEALRERVDHGVFGYPYGSDE---LYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96

Query: 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAV 214
            L +R +  PGD +V   P +    F  A+  NG  V++ P   D   + ++ + +  A 
Sbjct: 97  SLAIRALTKPGDGVVIQTPVY--PPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAF 154

Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEFS 260
             E+ K   L +P+NP G +   E+L KI E+     + V+ DE           +  F+
Sbjct: 155 VDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA 214

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWR---AKQPYNVSV 316
            L  R       DN I L + SK   LAGL+  Y       +     +       +  S 
Sbjct: 215 SLSER-----FADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSA 269

Query: 317 AAEVAACAALQN-PIYLEKVKEALIKER----ERLFKLLKDVPFLNPYPSYSNFILCEVT 371
              +A  AA      +L+++ E L   R    + L K L  V    P  +Y  ++ C   
Sbjct: 270 LGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCREL 329

Query: 372 SGMDAKKLKD---DLAKMGVMIRHYNNKELKGYVRVSVGKP 409
            G+D  +L +   + AK+ +       +E  G+VR++   P
Sbjct: 330 -GLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACP 369

Length = 388

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 32/207 (15%)

Query: 110 PPEVREALGQLKFPYIYP----DPESRR-LRAALAKD---SGLESDHILVGCGADELIDL 161
           PP ++EAL        YP     PE R  +   LA+    +GL+   +L   G+ EL+  
Sbjct: 42  PPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW 101

Query: 162 IMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK 220
           +   + L PGD +V     +  YE  A + GA VV+       SL        +  ++P 
Sbjct: 102 LPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD-----SL------TELGPQRPA 150

Query: 221 CIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWV------- 269
            I+L SP+NP G ++  + L K++    E   +V  DE Y E  G ++    +       
Sbjct: 151 LIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLEL-GWDAEPVSILDPRVCG 209

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGA 296
             H  L+ + + SK++ LAG R G+ A
Sbjct: 210 GDHTGLLAVHSLSKQSNLAGYRAGFVA 236

Length = 364

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 60.9 bits (148), Expect = 4e-10
 Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 29/316 (9%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPESRR-LRAALAKD 141
           +L      IV +   E  +  P  +++A       G+ K+  +   P  R+ + A L + 
Sbjct: 27  ELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERR 86

Query: 142 SGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA--AVVKV 197
           +GL    + I VG GA + I L +   L+ GD+++   P +  Y      N     +V  
Sbjct: 87  NGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVAC 146

Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP-ILVVL 252
           P +  F L  E +  A+   + + + L +P+NP G++ +  +L  +    L  P +LV+ 
Sbjct: 147 PEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLT 205

Query: 253 DEAYTEFSGLESRMEWV-----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
           D+ Y      +     +     +  D ++V    SK   + G R+GY A P  +I  + +
Sbjct: 206 DDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINK 265

Query: 308 -----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY 362
                +  P ++S AA  AA    Q+ +  E V     + R+    LL  +P L+     
Sbjct: 266 LQSQSSSCPSSISQAAAAAALNGDQSFV-TESVA-VYKQRRDYALALLNAIPGLSCLVPD 323

Query: 363 SNFILCEVTSGMDAKK 378
             F L    +G+  K 
Sbjct: 324 GAFYLYVNCAGLIGKT 339

Length = 402

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score = 60.0 bits (146), Expect = 8e-10
 Identities = 67/302 (22%), Positives = 127/302 (42%), Gaps = 43/302 (14%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
           L +D +++  G  + I++ +  + +PG  I+   P F +Y+  AA +G  V     +P K
Sbjct: 94  LTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEK 153

Query: 201 S---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
               D    +E +AD    EK   I + +P+NP GS+ + + L KI E+     I ++ D
Sbjct: 154 DWEIDLD-GLESLAD----EKTVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIAD 208

Query: 254 EAYTEFSGLESRMEWVKKHDNL---IVLRTFSKRAGLAGLRVGY-----------GAFPL 299
           E Y      ++    +    ++   + L   SKR  + G R+G+                
Sbjct: 209 EIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQ 268

Query: 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPI--YLEKVKEALIKERERLFKLLKDVPFLN 357
            +   L R   P   +   + A    L+N    + +     L    E  ++ LKD+P L 
Sbjct: 269 GLKNLLQRILGP---ATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV 325

Query: 358 -PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-------ELKGYVRVSVGKP 409
            P P  + +++ ++   +   ++KDD+     + R  +          L  +VR+++  P
Sbjct: 326 CPKPEGAMYLMVKLELEL-FPEIKDDVDFCEKLAREESVICLPGSAFGLPNWVRITITVP 384

Query: 410 EH 411
           E 
Sbjct: 385 ES 386

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 7/173 (4%)

Query: 133 RLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
            LRAA+A        H ++   G+ E I L++  +L PGD++V   P +      A   G
Sbjct: 55  GLRAAIADRWRGGDAHVVMTTHGSSEAIYLVLTALLRPGDEVVVVDPAYHSLSHLAVATG 114

Query: 192 AAVVKVPRKSDFSLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP--- 247
             V   P  +      +L A  A+   + + + +  P+NP G+ +   +L ++LE     
Sbjct: 115 CEVRPWPLLAVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVTPRELDELLERAARS 174

Query: 248 -ILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
             +++ D A+ +         +    +D +I   T SK  GL GLRVG+   P
Sbjct: 175 GAVLLWDNAFADLVHDAPPLPDPSALYDRVISFGTLSKAFGLPGLRVGWCVGP 227

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 33/214 (15%)

Query: 106 PYGPPPEVREALGQL-------KFPYIYPDPESRRLRAALAKDSG------LESDHILVG 152
            Y PPPE+  AL +         +  +   PE   LR A A          +  + + + 
Sbjct: 40  GYPPPPELLRALAEAAADPAAHLYGPVEGLPE---LREAYAAHYSRLYGAAISPEQVHIT 96

Query: 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL--NVELI 210
            G ++     M  +   GD+++   P +  ++    + G   V +P      L  +    
Sbjct: 97  SGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAA 156

Query: 211 ADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFS------ 260
              +   + + I L +PNNP G +   E L ++ ++     I ++LDE Y +F       
Sbjct: 157 EALI-TPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAP 215

Query: 261 -GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
             L +  +W    D L+ L +FSK   L G RVG
Sbjct: 216 HDLFADPDW---DDTLVHLYSFSKSYALTGHRVG 246

Length = 386

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 58.6 bits (142), Expect = 2e-09
 Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 27/300 (9%)

Query: 92  RKPEDIVKIDANENPYGP-PPEVREALGQL-KFPYIYPDPESR---RLRAALAK------ 140
           R+ EDI+      NP GP PP + E L ++ + P  +    SR   RLR A+++      
Sbjct: 26  RRGEDIIDFSMG-NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRY 84

Query: 141 DSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199
           D  ++ +   +V  G+ E +  +M   LD GD ++   P++ ++ + A + GA V  VP 
Sbjct: 85  DVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPL 144

Query: 200 KSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
                   EL   A+     KPK + L  P+NP    +  E   K++ +     +LVV D
Sbjct: 145 VEGVDFFNEL-ERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHD 203

Query: 254 EAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
            AY +  + G +  S M+     D  +   T SK   +AG R+G+      ++  L R K
Sbjct: 204 LAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIK 263

Query: 310 Q--PYNVSVAAEVAACAALQNPIY-LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFI 366
               Y      +VAA AAL+     +  + E   + R+ L K L +  ++   P  S ++
Sbjct: 264 SYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYV 323

Length = 395

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 57.2 bits (139), Expect = 5e-09
 Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 27/279 (9%)

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIA 211
           G+ E I  I    ++PGD ++   P + +Y+      G     +P K  + F  +++ I 
Sbjct: 101 GSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIP 160

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE-- 263
           + V + K K +F+  PNNP G++ + E   ++++      I+V  D AY+E  + G +  
Sbjct: 161 EDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPP 219

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV----AAE 319
           S +E     D  I   + SK   + G R+G+      +I  L + K   NV      A +
Sbjct: 220 SFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKS--NVDSGVFQAIQ 277

Query: 320 VAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD--- 375
            A  AAL  P   +E++++   + R+ L + L+ +      P  + ++   V  G     
Sbjct: 278 EAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPKGYTSAE 337

Query: 376 -AKKLKDDLAKMGVMIRHYN--NKELKGYVRVSVGKPEH 411
            A  L   L K GV++   N   +  +GY R+++  P+ 
Sbjct: 338 FATLL---LDKAGVVVTPGNGFGEYGEGYFRIALTVPDE 373

Length = 385

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 56.8 bits (138), Expect = 6e-09
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 39/212 (18%)

Query: 105 NPYGPP----PEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADE 157
           N Y PP      +REA+   K   +Y    D +S                 I V  GA E
Sbjct: 61  NQY-PPMTGVAALREAIAA-KTARLYGRQYDADSE----------------ITVTAGATE 102

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVER 216
            +   +  ++ PGD+++   P++  Y     + G   V+V  +  DF ++ +  A A+  
Sbjct: 103 ALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK 270
            + + I L +P+NP G++ +  D+  + ++     I V+ DE Y    F G  +    V 
Sbjct: 162 PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG--AGHASVL 219

Query: 271 KHDNL----IVLRTFSKRAGLAGLRVGYGAFP 298
           +H  L     V+ +F K   + G +VGY   P
Sbjct: 220 RHPELRERAFVVSSFGKTYHVTGWKVGYCVAP 251

Length = 386

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 55.1 bits (132), Expect = 3e-08
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 35/195 (17%)

Query: 132 RRLRAALAKDSG--------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
           ++ R A+A   G         + + +++  GA    + IM C+ DPGD  +   P +  +
Sbjct: 97  KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAF 156

Query: 184 EFDAA-VNGAAVVKVPRKSDFSLNVELIADAVE---------REKPKCIFLTSPNNPDGS 233
           + D     G  ++ VP  S  S N +L  DA +          +K K + LT+P+NP G+
Sbjct: 157 DRDLRWRTGVEIIPVPCSS--SDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 234 IINDEDLLKILEM----PILVVLDEAY--TEFSG--LESRMEWVKKHD------NLI-VL 278
           +++ + L  ++       I +V+DE Y  T F+G    S  E V   D      +LI ++
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274

Query: 279 RTFSKRAGLAGLRVG 293
            + SK  GL G RVG
Sbjct: 275 YSLSKDMGLPGFRVG 289

Length = 496

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 54.1 bits (130), Expect = 4e-08
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 23/259 (8%)

Query: 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV-ELIADAVEREKPKCIFLTSPNNP 230
            I+   P F  Y+  A  +G       R S    N+     + +       IF+ SP+NP
Sbjct: 81  NIIIVEPNFNEYKGYAFTHGI------RISALPFNLINNNPEILNNYNFDLIFIVSPDNP 134

Query: 231 DGSIINDEDLLKILE----MPILVVLDEAYTEF--SGLESRMEWVKKHDNLIVLRTFSKR 284
            G++I+ + LL I E       L+ +DEA+ +F  +  E  +   + + N+I+ R+ +K 
Sbjct: 135 LGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKI 194

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNV-SVAAEVAACAALQNPIYLEKVKEALIK-E 342
            G+  LR+GY A     ++   +  +P++V   A +      L    Y+ K    +++ E
Sbjct: 195 LGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFIRSIDLD---YVAKHSLDIMENE 251

Query: 343 RERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG-- 400
           R  L   L+ + F       +NFI        DA      L K G+++R  ++ E  G  
Sbjct: 252 RSYLINNLEAMGFRAAGDPSANFI---TFMIPDAHDFYSYLLKNGILVRLLDDYECLGEQ 308

Query: 401 YVRVSVGKPEHTDALMECL 419
           Y+R+++ +      L+  L
Sbjct: 309 YIRIAIRRRSFNIKLVNAL 327

Length = 332

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score = 53.4 bits (129), Expect = 1e-07
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 21/228 (9%)

Query: 115 EALGQLKFPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172
           + LGQ K  Y  I   PE +   A+L +   ++ ++IL   GA     L++  +++PGD 
Sbjct: 49  QELGQKKLTYGWIEGSPEFKEAVASLYQ--NVKPENILQTNGATGANFLVLYALVEPGDH 106

Query: 173 IVDCPPTFT-MYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229
           ++   PT+  +Y+   ++ GA V   ++  ++ +  +++ +   V R   K I + + NN
Sbjct: 107 VISVYPTYQQLYDIPESL-GAEVDYWQLKEENGWLPDLDELRRLV-RPNTKLICINNANN 164

Query: 230 PDGSIINDEDLLKILEMP------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283
           P G++++   L +I+E+       +L   DE Y       S       ++  I   + SK
Sbjct: 165 PTGALMDRAYLEEIVEIARSVDAYVLS--DEVYRPLDEDGSTPSIADLYEKGISTNSMSK 222

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQPYN---VSVAAEVAACAALQN 328
              L G+RVG+ A    +I+ L R  + Y      V  ++ A  AL++
Sbjct: 223 TYSLPGIRVGWIAANEEVIDIL-RKYRDYTMICAGVFDDMLASLALEH 269

Length = 373

>gnl|CDD|180188 PRK05664, PRK05664, threonine-phosphate decarboxylase; Reviewed

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 11/193 (5%)

Query: 207 VELIADAVEREKPKC--IFLTSPNNPDGSIINDEDLL----KILEMPILVVLDEAYTEFS 260
            EL    VE        + + +PNNP G   +   LL    ++      +V+DEA+ + +
Sbjct: 111 RELDEAEVEAALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT 170

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEV 320
              S +        LIVLR+F K  GLAG R+G+     +++  L     P+ VS     
Sbjct: 171 PQHS-LAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVSGPTRW 229

Query: 321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 380
            A AAL +  +  + +E L+   +RL  LL+    L P    + F     T   DA  L 
Sbjct: 230 LAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LTPAGGCALFQWV-RTE--DAAALH 285

Query: 381 DDLAKMGVMIRHY 393
           + LA+ G++ R +
Sbjct: 286 EFLARRGILTRLF 298

Length = 330

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 38/277 (13%)

Query: 78  QPILPFEVLSI-----QLGRKPEDIVKIDANENPYGPPPEVREAL------------GQL 120
             I PF V+ +      L R   DI+ +   E  +  P  V EA               L
Sbjct: 8   DAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSAL 67

Query: 121 KFPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                   P    + A  A+  GL+     I+V  GA   + L    +++ GD+++   P
Sbjct: 68  GLA-----PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDP 122

Query: 179 TFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSI 234
           ++     F AA  G  V+ VP  S  +   +L A  VE    E+ + + L SP+NP G+ 
Sbjct: 123 SYPCNRHFVAAAEGRPVL-VP--SGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTS 179

Query: 235 INDEDLLKILEMPI----LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           I  ++L +I+E         ++DE Y   S   + +  +   D++I + +FSK   + G 
Sbjct: 180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGW 239

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSV-AAEVAACAAL 326
           R+G+   P +++    +  Q  N+ + A+ +A  AAL
Sbjct: 240 RLGWLVVPEALVGTFEKLAQ--NLFICASALAQHAAL 274

Length = 388

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 13/177 (7%)

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCI 222
           C+++PGD I+   P +  Y    A+  A    +P   +++F  +   I + V  EK K +
Sbjct: 113 CLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEV-AEKAKLM 171

Query: 223 FLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAY--TEFSGLE--SRMEWVKKHDN 274
           +L  PNNP G++       + +    +  I VV D AY    F G +  S ++     D 
Sbjct: 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDV 231

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV--AAEVAACAALQNP 329
            I L T SK   +AG RV +     S+IE +   +    VS+  A + AA  AL + 
Sbjct: 232 GIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD 288

Length = 389

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 50.4 bits (121), Expect = 7e-07
 Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 47/341 (13%)

Query: 110 PPEVREALGQ-LKFP-YIYPDPESRRLRAA---LAK--DSGLESDHILVGCGADELIDLI 162
           PP V EAL Q L+ P + Y  P      A    LA+     ++ + I+   G    +   
Sbjct: 40  PPAVLEALKQRLEHPVFGYTLPPDSLYAAVINWLAQRHGWQIDPEWIVFLPGVVPSLFAA 99

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAVERE 217
           +R +  PG+ ++   P +    F +AV  NG  +V  P K D   +  ++E + DA+  E
Sbjct: 100 VRALTAPGEGVIVQTPVY--PPFLSAVKSNGRELVLNPLKLDPGRYRFDLEDLEDAI-TE 156

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-------SRM 266
           K + + L SP+NP G +   E+L ++ E+     ++VV DE + +            S  
Sbjct: 157 KARLLLLCSPHNPVGRVWTREELTRLAELCLRHNVVVVSDEIHADLVYPPNKHIPLASLS 216

Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-----LSIIEYLWRAK-QPYNV--SVAA 318
             + +    + L +  K   +AGL + +   P      +  E   R   Q  N+   VA 
Sbjct: 217 PEIAE--RTVTLLSPGKTFNIAGLNISFAIIPNPELRRAFQEAAQRVHIQHGNLFGYVAF 274

Query: 319 EVAACAALQNPIYLEKVKEALIKERERLFKLL-KDVPFLN---PYPSYSNFILCEVTSGM 374
           E    A  +   +L+ +   L   R+ + + + K +P +    P  +Y  ++ C    G+
Sbjct: 275 E---AAYREGEPWLDALLAYLRGNRDLVEEFIAKRLPQIRVRPPEATYLAWLDCR-ALGL 330

Query: 375 DAKKLKDDL---AKMGVMIRHYNNKELKGYVRVSVGKPEHT 412
           D   L+      A +G+           G++R++ G P  T
Sbjct: 331 DDADLRAFFIEQAGLGLNPGISFGDGGSGFMRLNFGCPRST 371

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 50.6 bits (121), Expect = 8e-07
 Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227
           PGD+++   P+F  Y     + GA  V +     DF +N + +A A+   + + I + +P
Sbjct: 113 PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTP 171

Query: 228 NNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLR 279
           +NP  ++ +  DL ++ ++     I+++ DE Y       +R   + +H  L    +++ 
Sbjct: 172 HNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVS 231

Query: 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKE 337
           +F K   + G RVGY   P  +++ + +  Q   ++     + A   AL  P     +  
Sbjct: 232 SFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGA 291

Query: 338 ALIKERERLFKLLKDVPFLNPYPSYSNFIL 367
              ++R+ L + L    F    PS  +F +
Sbjct: 292 FYQRKRDLLARELAGSRF-ELLPSEGSFFM 320

Length = 384

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 32/222 (14%)

Query: 178 PTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKC--IFLTSPNNPDGS 233
           P + +YE  A  + A V+ +P  +++DF+ ++       E+E  +   + L SPNNP G 
Sbjct: 117 PFYQIYEGAAIASRAKVLLMPLTKENDFTPSLN------EKELQEVDLVILNSPNNPTGR 170

Query: 234 IINDEDLL----KILEMPILVVLDEAYTEF-------SGLESRMEWVKKHD--NLIVLRT 280
            ++ E+L+      L+   +++ DE Y+E        S LE+ +  V      N++V+ +
Sbjct: 171 TLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASIL-VGNESFKNVLVINS 229

Query: 281 FSKRAGLAGLRVGYGAFPLSIIE-YL-WRAKQPYNVSVAAEVAACAALQNPIYLEKVKEA 338
            SKR+   GLR G+ A   SI++ Y  +R        +  + AA  A  +  + E  +  
Sbjct: 230 ISKRSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNI 289

Query: 339 LIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-AKKL 379
             K      KL +++      P  + ++   V +  +  KKL
Sbjct: 290 YAKN----LKLAREI-LGITIPPATFYVWLPVDNDEEFTKKL 326

Length = 374

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 12/81 (14%)

Query: 221 CIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY-TEFSGL---ESRMEWVKKH 272
            I ++ P NP G+++ DE+L K+  +     I +++D AY   F G+   E+   W   +
Sbjct: 182 AICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLW---N 238

Query: 273 DNLIVLRTFSKRAGLAGLRVG 293
            N+I+  + SK  GL G+R G
Sbjct: 239 PNIILCMSLSK-LGLPGVRCG 258

Length = 416

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score = 48.8 bits (116), Expect = 3e-06
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 12/138 (8%)

Query: 129 PESRRLRAA-LAKD--SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           P++RR  A  L++D    L  D + +  G  + ID+ +  +  PG  I+   P F +YE 
Sbjct: 76  PQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL 135

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLK 242
            AA     V  V    +    V+L  DAVE    +    + + +P NP G++ + + L K
Sbjct: 136 CAAFRHLEVRYVDLLPEKGWEVDL--DAVEALADQNTVALVIINPGNPCGNVYSYQHLKK 193

Query: 243 ILE----MPILVVLDEAY 256
           I E    + ILV+ DE Y
Sbjct: 194 IAETAEKLKILVIADEVY 211

Length = 409

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 17/256 (6%)

Query: 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFL 224
           ++PGD ++   P +  +     + GA +  +  K   D+ +++  I + V + + K ++ 
Sbjct: 118 VNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYF 176

Query: 225 TSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLI 276
             P+NP  +    E   +I+       I++V D  Y E  F G +  S +E     D  +
Sbjct: 177 NYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGV 236

Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYLE 333
              T SK   +AG RVG+      II+ L   K    Y +  A + AA  ALQ P  YL+
Sbjct: 237 EFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQ 296

Query: 334 KVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK-DDLAKMGVMIRH 392
           +V+E     R+ L + L ++ +  P    + ++      GM +     + L K GV++  
Sbjct: 297 QVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTP 356

Query: 393 YN--NKELKGYVRVSV 406
            N   +  +GYVR+S+
Sbjct: 357 GNAFGEGGEGYVRISL 372

Length = 394

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 19/141 (13%)

Query: 222 IFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF---SGL-ESRMEWVKKHD 273
           I+L SPNNP G+++  E L ++     E   L++ D AY+ F     L  S  E      
Sbjct: 177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGARF 236

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFP-------LSIIEYLWRAKQ--PYN-VSVAAEVAAC 323
             I  R+FSK AG  G+R+G+   P          +   W  +Q   +N  S   + AA 
Sbjct: 237 CAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAE 296

Query: 324 AALQNPIYLEKVKEALIKERE 344
           A       L+ + EA+    E
Sbjct: 297 AGYA-GEGLQPILEAISYYME 316

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score = 48.2 bits (114), Expect = 6e-06
 Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 32/266 (12%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
           L  + I +  G ++ I+++   +  P   I+   P F  Y+  AA +G  V K   +P K
Sbjct: 129 LTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEK 188

Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAY 256
            ++ +++E I +A+  E    + + +PNNP G++ + + L K+ E    + I+V+ DE Y
Sbjct: 189 -EWEIDLEGI-EAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVY 246

Query: 257 TEFSGLESRMEWVKKHDNLIVLRTF---SKRAGLAGLRVGYGAF--PLSIIE---YLWRA 308
                 ++    + K  +++ + T    SK   + G ++G+ A   P  + E    L   
Sbjct: 247 DRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSI 306

Query: 309 KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFK--------LLKDVPFL--NP 358
           KQ  +V+        AAL  P  LEK  +    ++ ++ K         LKD+P +    
Sbjct: 307 KQNLDVTPDPATIIQAAL--PAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPK 364

Query: 359 YPSYSNFILCEVT-SGMDAKKLKDDL 383
            P    ++L ++  S MD   +KDD+
Sbjct: 365 KPESCTYLLTKLELSLMD--NIKDDI 388

Length = 462

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 129 PESRRLRAALAKD--SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           P  R +   L++D    L +D I +  G  + I++IM  +  PG  I+   P + +YE  
Sbjct: 98  PARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEAR 157

Query: 187 AAVNGAAVVK---VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
           A  +G  V     +P +  + +++E + +A+  E    + + +PNNP GS+ + E L KI
Sbjct: 158 AVFSGLEVRHFDLLPER-GWEVDLEGV-EALADENTVAMVIINPNNPCGSVYSYEHLAKI 215

Query: 244 LE----MPILVVLDEAY 256
            E    + ILV+ DE Y
Sbjct: 216 AETARKLGILVIADEVY 232

Length = 430

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 47.7 bits (114), Expect = 7e-06
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 23/212 (10%)

Query: 134 LRAALA----KDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FD 186
           LR A+A    +  G++ D   ILV  G    + L    ++DPG   +   P +     F 
Sbjct: 74  LREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFL 133

Query: 187 AAVNGAAV-VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
             V GAA  V V   S + L   L+ +           + SP NP G++++ ++L  + +
Sbjct: 134 RLVEGAAQLVPVGPDSRYQLTPALV-ERHWNADTVGALVASPANPTGTLLSRDELAALSQ 192

Query: 246 -----MPILVVLDEAYTEFSGLESRMEW---VKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
                   LVV DE Y    GL   ++    ++  D+  VL +FSK  G+ G R+G+   
Sbjct: 193 ALRARGGHLVV-DEIY---HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVA 248

Query: 298 PLSIIEYLWRAKQPYNVSVA--AEVAACAALQ 327
           P + +  L +  Q   +S +  A+ AA A  +
Sbjct: 249 PPAAVPELEKLAQNLYISASTPAQHAALACFE 280

Length = 387

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 45.1 bits (107), Expect = 5e-05
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 12/85 (14%)

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY-TEFSGL---ESRMEW 268
           E    I ++ P NP G+++ DE+L K+  +     I +++D AY   F G+   ++   W
Sbjct: 178 ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLW 237

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVG 293
              ++N+I+  + SK  GL G R G
Sbjct: 238 ---NENIILCMSLSK-LGLPGSRCG 258

Length = 417

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 44.2 bits (105), Expect = 8e-05
 Identities = 82/316 (25%), Positives = 123/316 (38%), Gaps = 67/316 (21%)

Query: 83  FEVLSIQLGRKPEDIVKIDANEN-----PYGP-PPEVREALGQ--LKFPYIYPD----PE 130
           FEV+S QL R+   I       N     P  P P +VR A     L     YP     PE
Sbjct: 16  FEVMS-QLAREHGAI-------NLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPE 67

Query: 131 SRRLRAALAKDS----GLESD---HILVGCGADE-LIDLIMRCVLDPGDKIVDCPPTFTM 182
              LR A+A       GL+ D    ++V  GA E L   ++  +++PGD++V   P +  
Sbjct: 68  ---LRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL-ALVEPGDEVVLFQPLYDA 123

Query: 183 YEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
           Y       G     V  +   + L    +A A    + K + L +P NP G +   E+L 
Sbjct: 124 YLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELA 182

Query: 242 KILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVL-----RTF-----SKRA 285
            + E       + + DE +    F G          H  L+ L     RT       K  
Sbjct: 183 LLAEFCQRHDAVAICDEVWEHVVFDGRR--------HIPLMTLPGMRERTVKIGSAGKIF 234

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPIYLEKVKEAL 339
            L G +VG+      ++  L +A Q      P N+  A  VA      +  Y E ++  L
Sbjct: 235 SLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAA--VAYGLGKPDD-YFEGMRADL 291

Query: 340 IKERERLFKLLKDVPF 355
            + R+RL   L+ + F
Sbjct: 292 ARSRDRLAAGLRRIGF 307

Length = 387

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 44.1 bits (105), Expect = 9e-05
 Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 50/266 (18%)

Query: 70  HLRKLKPYQPILPFEVLSIQL--GRKPE---DIVKIDANENPYGPPPE-VREA----LGQ 119
            L +L+PY    PFE L   L  G  P      + +   E P  P P  +++A    L  
Sbjct: 4   RLDRLQPY----PFEKLR-ALFAGVTPPADLPPISLSIGE-PKHPTPAFIKDALAANLDG 57

Query: 120 L-KFPYIYPDPESRRLRAALA----KDSGLES----DHILVGCGADELIDLIMRCVLDPG 170
           L  +P     P    LR A+A    +  GL +      +L   G+ E +    + V+D  
Sbjct: 58  LASYPTTAGLPA---LREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRD 114

Query: 171 DK--IVDCP-PTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLT 225
               +V CP P + +YE  A + GA    +     ++F+ + + +   V   + + +F+ 
Sbjct: 115 GPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-RTQLLFVC 173

Query: 226 SPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF---------SGLESRMEWVKKH 272
           SP NP G+++  +D  K+  +      ++  DE Y+E            LE+  E + + 
Sbjct: 174 SPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAE-LGRD 232

Query: 273 D--NLIVLRTFSKRAGLAGLRVGYGA 296
           D   L+V  + SKR+ + GLR G+ A
Sbjct: 233 DFKRLVVFHSLSKRSNVPGLRSGFVA 258

Length = 396

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF---SGL-ESRMEW 268
           EK   I+L  PNNP G+++  E L        E   L++ D AY  F     L  S  E 
Sbjct: 175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEI 234

Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVGY 294
               +  I  R+FSK AG  G R  Y
Sbjct: 235 EGARECAIEFRSFSKTAGFTGTRCAY 260

Length = 409

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN---GAAVVKV- 197
             ++ D I  G G  ELI+L M  +LD GD+++   P + ++   A VN   G AV    
Sbjct: 204 PNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT--ACVNLAGGTAVHYRC 261

Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
             +S++  +++ I   +   + K I + +PNNP G++   E L +I+++     +++  D
Sbjct: 262 DEQSEWYPDIDDIRSKIT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSD 320

Query: 254 EAYTE--FSGLESRMEWVKKHDNLIVLRTF---SKRAGLAGLRVGY 294
           E Y      GLE         D   V  TF   SK   +AG R+G+
Sbjct: 321 EIYDRLVMDGLEHTSIASLAPDLFCV--TFSGLSKSHMIAGYRIGW 364

Length = 517

>gnl|CDD|235897 PRK06959, PRK06959, putative threonine-phosphate decarboxylase; Provisional

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)

Query: 226 SPNNPDGSIINDEDLL----KILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281
           +PNNP    +    LL    ++      +++DEA+ +     S      +   L+VLR+ 
Sbjct: 138 NPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDR-PGLVVLRSV 196

Query: 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIK 341
            K  GLAG+R G+     +++  L  A   + VS  A  A  AA  +  +   ++E L  
Sbjct: 197 GKFFGLAGVRAGFVLAAPALLAALRDALGAWTVSGPARHAVRAAFADAAWQAAMRERLAA 256

Query: 342 ERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY 393
           +  RL  LL+   F     P +S       T    A  L   LA+ G+  R++
Sbjct: 257 DGARLAALLRAHGFAVHATPLFS------WTDDPRAAALHAALARRGIWTRYF 303

Length = 339

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 26/216 (12%)

Query: 169 PGDKIVDCP-PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKC 221
           PGD I+ CP P++ ++ F   + G  +  VP + D     E    A+ER       KP  
Sbjct: 115 PGDVIL-CPNPSYPIHAFGFIMAGGVIRSVPAEPD-----EEFFPALERAVRHSIPKPIA 168

Query: 222 IFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTE--FSGL--ESRMEWVKKH 272
           + +  P+NP   +  D D  K +     +  I+++ D AY+E  F G    S ++     
Sbjct: 169 LIVNYPSNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAK 227

Query: 273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP- 329
           D  +   + SK   +AG R+G+      +I  L R K    Y      +VAA AAL  P 
Sbjct: 228 DVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQ 287

Query: 330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF 365
             + +++E   K R+ L +      +  P P+ S F
Sbjct: 288 DCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMF 323

Length = 405

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score = 42.5 bits (101), Expect = 3e-04
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 17/125 (13%)

Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKI-VDCP--PTFTMYEFDAAVN---GAAV-V 195
            ++ D I +G G  ELI + M+ +L+ GD++ V  P  P +T     AAV+   G  V  
Sbjct: 92  DVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWT-----AAVSLSGGKPVHY 146

Query: 196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVV 251
               ++ +  +++ I   +   + K I + +PNNP G++ + E L +I+E+     +++ 
Sbjct: 147 LCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIF 205

Query: 252 LDEAY 256
            DE Y
Sbjct: 206 ADEIY 210

Length = 404

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 8/159 (5%)

Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF 203
           L  D + +  G     ++I++ +  P   I+   P F   E  A  +   +       + 
Sbjct: 95  LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEK 154

Query: 204 SLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----MPILVVLDEAYTE 258
              V+L A +A+  E    + + +P NP GS+ + E L KI E    + ILV+ DE Y  
Sbjct: 155 GWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGH 214

Query: 259 F---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
               S     M        +I L + SKR  + G  +G+
Sbjct: 215 IVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253

Length = 409

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 31/186 (16%)

Query: 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA 192
           ++R   A+    + D I++  GA    +L+   + DPGD ++   PT     FD  +   
Sbjct: 110 QIRGGKAR---FDPDRIVLTAGATAANELLTFILADPGDALL--VPTPYYPGFDRDLRWR 164

Query: 193 AVVK-VPRKSDFSLNVELIADAVERE---------KPKCIFLTSPNNPDGSIINDEDLLK 242
             VK VP   D S N ++   A+E           + + + +T+P+NP G+ +    L  
Sbjct: 165 TGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLED 224

Query: 243 ILEMP----ILVVLDEAYT-------EFSG----LESRMEWVKKHDNLIVLRTFSKRAGL 287
           IL+      I +V DE Y+       EF      +E+R  +    + + ++ + SK  GL
Sbjct: 225 ILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEAR-GYKGVAERVHIVYSLSKDLGL 283

Query: 288 AGLRVG 293
            G RVG
Sbjct: 284 PGFRVG 289

Length = 447

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 41.6 bits (98), Expect = 6e-04
 Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 12/202 (5%)

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCI 222
           C ++PGD  +   P + +        G  V  +P   +++F  +++ I   + +EK K +
Sbjct: 125 CFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDI-KEKAKLL 183

Query: 223 FLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLESRMEWVKKHDNLIV- 277
           +L  PNNP G++   E   ++++      I+VV D AY   +     + ++       V 
Sbjct: 184 YLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVG 243

Query: 278 --LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS--VAAEVAACAALQNPIYLE 333
             + + SK   + G R+ +      I++     K   +    +A + A   AL +P   E
Sbjct: 244 VEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITE 303

Query: 334 KVKEALIKERERLFKLLKDVPF 355
           K++E   +  ++L K+L +V F
Sbjct: 304 KIREKYSRRLDKLVKILNEVGF 325

Length = 410

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 27/210 (12%)

Query: 100 IDANE-NPYGP---PPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGA 155
           +D+ E N Y P    PE REA+                L++ + KD      ++++  G 
Sbjct: 63  VDSQECNGYPPTVGSPEAREAVATYWRNSFVHKES---LKSTIKKD------NVVLCSGV 113

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADA 213
              I + +  + D GD I+   P F  YE    A            + D+  +++ I   
Sbjct: 114 SHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL 173

Query: 214 VEREKPKCIFLTSPNNPDGSIIND---EDLLKILE-MPILVVLDEAYTE--FSGLESRME 267
           V+ ++ K + +T+P+NP GS  +    ED++++ E + + ++ DE Y    F+G  +   
Sbjct: 174 VD-DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFT 230

Query: 268 WVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
            V   D     ++L   +K   + G R+G+
Sbjct: 231 SVADFDTTVPRVILGGTAKNLVVPGWRLGW 260

Length = 412

>gnl|CDD|131032 TIGR01977, am_tr_V_EF2568, cysteine desulfurase family protein

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 29/174 (16%)

Query: 107 YGPPPEVREALGQ-LKFPYIYPDPESRRL-----------RAALAKDSGL-ESDHILVGC 153
           Y  P EV EA+    K     P     RL           R  LAK      S H++   
Sbjct: 10  YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTN 69

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV---------NGAAVVKVPRKSDFS 204
            A   +++ ++ +L  GD ++      T  E ++            G  +  V   ++  
Sbjct: 70  NATTALNIALKGLLKEGDHVIT-----TPMEHNSVARPLECLKEQIGVEITIVKCDNEGL 124

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYT 257
           ++ E I  A+ +   K I ++  +N  G+I+  E++ ++  E  I  +LD A T
Sbjct: 125 ISPERIKRAI-KTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQT 177

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown [Unknown function, Enzymes of unknown specificity]. Length = 376

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 14/137 (10%)

Query: 135 RAALAK-----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
           R A+A      D  +E+D +++  G    I++ +  + + G  I+   P F +Y   A  
Sbjct: 79  REAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLAES 138

Query: 190 NGAAVVKVPRKSDFSLNVELIA-DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE--- 245
            G  V       D S  ++L   +++  EK   + + +P+NP GS+ + + L +IL    
Sbjct: 139 MGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAE 198

Query: 246 ---MPILVVLDEAYTEF 259
              +PI+   DE Y + 
Sbjct: 199 RQCLPIIA--DEIYGDM 213

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	423
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PLN02187	462	rooty/superroot1	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK07324	373	transaminase; Validated	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK07337	388	aminotransferase; Validated	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PRK09148	405	aminotransferase; Validated	100.0
PLN02656	409	tyrosine transaminase	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK06855	433	aminotransferase; Validated	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
PRK08175	395	aminotransferase; Validated	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK07777	387	aminotransferase; Validated	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PLN02231	534	alanine transaminase	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PLN02368	407	alanine transaminase	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PLN02397	423	aspartate transaminase	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
PRK10534	333	L-threonine aldolase; Provisional	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	100.0
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	100.0
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	100.0
PRK13392	410	5-aminolevulinate synthase; Provisional	100.0
PLN02721	353	threonine aldolase	99.98
PRK02948	381	cysteine desulfurase; Provisional	99.98
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.98
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.98
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.98
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.98
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.97
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.97
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.97
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.97
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.97
PRK07179	407	hypothetical protein; Provisional	99.97
PLN02822	481	serine palmitoyltransferase	99.97
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
PLN02483	489	serine palmitoyltransferase	99.97
PRK07049	427	methionine gamma-lyase; Validated	99.97
PRK09064	407	5-aminolevulinate synthase; Validated	99.97
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.97
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.97
PRK02627	396	acetylornithine aminotransferase; Provisional	99.96
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.96
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.96
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.96
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.96
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.96
PLN02409	401	serine--glyoxylate aminotransaminase	99.96
PLN02242	418	methionine gamma-lyase	99.96
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.96
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.96
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.96
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.96
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.96
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.96
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.96
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.96
PRK13393	406	5-aminolevulinate synthase; Provisional	99.96
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.96
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.95
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.95
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.95
PRK06234	400	methionine gamma-lyase; Provisional	99.95
PRK06460	376	hypothetical protein; Provisional	99.95
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.95
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.95
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.95
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.95
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.94
PRK06767	386	methionine gamma-lyase; Provisional	99.94
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.94
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.94
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.94
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.94
PRK08045	386	cystathionine gamma-synthase; Provisional	99.94
PRK04260	375	acetylornithine aminotransferase; Provisional	99.94
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.93
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.93
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.93
PRK08249	398	cystathionine gamma-synthase; Provisional	99.93
PRK07505	402	hypothetical protein; Provisional	99.93
PLN02651	364	cysteine desulfurase	99.93
PRK14012	404	cysteine desulfurase; Provisional	99.93
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.93
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.93
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.93
PRK07582	366	cystathionine gamma-lyase; Validated	99.93
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.93
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.93
PRK08776	405	cystathionine gamma-synthase; Provisional	99.93
PLN02955	476	8-amino-7-oxononanoate synthase	99.93
PRK07503	403	methionine gamma-lyase; Provisional	99.93
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.93
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.92
PRK08861	388	cystathionine gamma-synthase; Provisional	99.92
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.92
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.92
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.92
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.92
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.92
PRK05968	389	hypothetical protein; Provisional	99.92
PRK07811	388	cystathionine gamma-synthase; Provisional	99.92
PRK08064	390	cystathionine beta-lyase; Provisional	99.92
PRK07050	394	cystathionine beta-lyase; Provisional	99.91
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.91
PRK08574	385	cystathionine gamma-synthase; Provisional	99.91
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.91
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.9
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.9
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.9
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.9
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK09028	394	cystathionine beta-lyase; Provisional	99.9
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.9
PRK05939	397	hypothetical protein; Provisional	99.9
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.89
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.89
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.89
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.89
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.89
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PRK07671	377	cystathionine beta-lyase; Provisional	99.89
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.89
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.89
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.89
PLN00144	382	acetylornithine transaminase	99.88
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.88
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.88
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.88
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
PLN02624	474	ornithine-delta-aminotransferase	99.87
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.87
PLN02509	464	cystathionine beta-lyase	99.87
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.87
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.87
PRK05967	395	cystathionine beta-lyase; Provisional	99.86
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.86
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.86
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.85
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.85
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.85
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.85
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.85
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.84
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.84
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.84
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.84
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.84
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.84
PRK08114	395	cystathionine beta-lyase; Provisional	99.84
PLN02724	805	Molybdenum cofactor sulfurase	99.83
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.83
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.83
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.83
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.82
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.82
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.82
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.82
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.82
PRK03080	378	phosphoserine aminotransferase; Provisional	99.82
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.82
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.82
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.81
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.81
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.8
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.8
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.8
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.79
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.79
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.79
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.79
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.78
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.78
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.78
PRK02769	380	histidine decarboxylase; Provisional	99.78
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.77
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.77
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.77
PRK06434	384	cystathionine gamma-lyase; Validated	99.77
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.76
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.76
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.76
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.76
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.75
PLN02271	586	serine hydroxymethyltransferase	99.75
PLN03032	374	serine decarboxylase; Provisional	99.74
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.74
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.74
PRK06541	460	hypothetical protein; Provisional	99.74
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.73
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.73
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.72
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.72
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.71
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.71
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.71
PRK07678	451	aminotransferase; Validated	99.71
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.7
PRK06062	451	hypothetical protein; Provisional	99.7
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.7
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.69
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.69
PRK06105	460	aminotransferase; Provisional	99.69
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.68
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.68
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.68
PRK06149	972	hypothetical protein; Provisional	99.68
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.68
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.68
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.67
PRK07046	453	aminotransferase; Validated	99.67
PRK04311	464	selenocysteine synthase; Provisional	99.67
PRK12403	460	putative aminotransferase; Provisional	99.67
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.66
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.66
PRK05965	459	hypothetical protein; Provisional	99.66
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.65
PRK06148	1013	hypothetical protein; Provisional	99.65
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.65
PRK07483	443	hypothetical protein; Provisional	99.65
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.65
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.65
PRK07482	461	hypothetical protein; Provisional	99.65
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.64
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.64
PLN02452	365	phosphoserine transaminase	99.64
PRK07480	456	putative aminotransferase; Validated	99.64
PRK07036	466	hypothetical protein; Provisional	99.64
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.63
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.63
PRK06917	447	hypothetical protein; Provisional	99.63
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.63
PRK13237	460	tyrosine phenol-lyase; Provisional	99.63
PRK07481	449	hypothetical protein; Provisional	99.62
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.6
PRK15029	755	arginine decarboxylase; Provisional	99.6
PLN02263	470	serine decarboxylase	99.6
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.6
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.59
PRK05367	954	glycine dehydrogenase; Provisional	99.58
PRK13578	720	ornithine decarboxylase; Provisional	99.58
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.58
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.58
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.58
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.57
PLN02880	490	tyrosine decarboxylase	99.56
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.56
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.55
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.55
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.55
PRK12566	954	glycine dehydrogenase; Provisional	99.55
PRK15400	714	lysine decarboxylase CadA; Provisional	99.55
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.52
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.51
PRK05367	954	glycine dehydrogenase; Provisional	99.5
PRK12462	364	phosphoserine aminotransferase; Provisional	99.49
PLN02590	539	probable tyrosine decarboxylase	99.49
PRK08297	443	L-lysine aminotransferase; Provisional	99.48
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.46
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.46
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.46
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.44
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.43
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.42
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.4
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.37
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.31
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.27
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.26
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.21
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.2
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.19
COG4100	416	Cystathionine beta-lyase family protein involved i	99.14
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.14
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.13
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.13
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.97
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	98.95
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.95
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.92
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	98.91
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.85
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	98.85
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.73
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.61
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.49
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.42
PRK12566	954	glycine dehydrogenase; Provisional	98.39
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.32
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	97.92
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.88
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	97.8
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	97.8
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	97.73
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.07
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	95.73
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	93.15
PLN02672	1082	methionine S-methyltransferase	87.41
COG2102	223	Predicted ATPases of PP-loop superfamily [General	86.95
PF08247	12	ENOD40: ENOD40 protein; InterPro: IPR013186 The so	84.03

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-57  Score=446.84  Aligned_cols=365  Identities=82%  Similarity=1.317  Sum_probs=329.3

Q ss_pred             cCCCCCchhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHH
Q 014492           58 QRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAA  137 (423)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~  137 (423)
                      +..++...++++.+.++.+|.+...+...+++++..+.++|+|+.|+|+++++|.+.+++.+....+.||+++..+||++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~~Yp~~~~~~lr~~   94 (380)
T PLN03026         15 KQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMKFPYVYPDPESRRLRAA   94 (380)
T ss_pred             cccccHhHHhhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhHhhccCCCCCHHHHHHH
Confidence            44567788899999999998777778888888887778899999999999999999999876433356898888999999


Q ss_pred             HHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC
Q 014492          138 LAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE  217 (423)
Q Consensus       138 ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~  217 (423)
                      +++++++++++|++|+|+++++..++..++++||+|++++|+|..|...++..|++++.+|.++++.+|++++++.+...
T Consensus        95 ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~  174 (380)
T PLN03026         95 LAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH  174 (380)
T ss_pred             HHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999999999998777899999999998447


Q ss_pred             CceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492          218 KPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      ++++|++|+||||||.+++.+++++|++..++||+||+|.+|.+.++....+...+++++++||||.||++|+|+||+++
T Consensus       175 ~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~  254 (380)
T PLN03026        175 KPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAF  254 (380)
T ss_pred             CCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeec
Confidence            89999999999999999999999999987789999999999986554445555678999999999999999999999999


Q ss_pred             CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHH
Q 014492          298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAK  377 (423)
Q Consensus       298 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~  377 (423)
                      ++++++.+.+...+++++.++|.++.++|++.+|+++.++.++++++++.+.|+++++..+.|++++|+|++++++.++.
T Consensus       255 ~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~  334 (380)
T PLN03026        255 PLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTSGRDAK  334 (380)
T ss_pred             CHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCCCCCHH
Confidence            99999999998888999999999999999988899999999999999999999998877778999999999998667889


Q ss_pred             HHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.+.|.++||.|+++..+..++++||+++..+++++|.++++++
T Consensus       335 ~~~~~l~~~gI~v~~~~~~~~~~~lRis~~~~~~~~~l~~al~~~  379 (380)
T PLN03026        335 KLKEDLAKMGVMVRHYNSKELKGYIRVSVGKPEHTDALMEALKQL  379 (380)
T ss_pred             HHHHHHHHCCeEEEECCCCCCCCEEEEecCCHHHHHHHHHHHHHh
Confidence            999999999999999876556789999999988899999999876

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-57  Score=434.18  Aligned_cols=342  Identities=47%  Similarity=0.751  Sum_probs=309.6

Q ss_pred             HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhC-CC
Q 014492           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSG-LE  145 (423)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g-~~  145 (423)
                      ++.+.++.+|.++      ++..|.+  ++++|++|+||++++|.+.+++.+ ....++||++...++++++++++| ++
T Consensus         3 ~~~i~~l~~y~~~------~~~~g~~--~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~~~~l~~a~a~~~~~~~   74 (356)
T COG0079           3 RPLVRDLPPYVPG------ARQYGLP--GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPDYRELRAALAEYYGVVD   74 (356)
T ss_pred             chhhhhccCCCCc------ccccCCc--cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCCCC
Confidence            4556677777653      2333443  689999999999999999988877 344589999999999999999999 88


Q ss_pred             CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      +++|++++|+++.|..++++++.+||+|+++.|+|..|...++..|++++.+|..+ |.+|++.+.+.+.+ ++++|++|
T Consensus        75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~-~~~lv~i~  152 (356)
T COG0079          75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRD-KTKLVFLC  152 (356)
T ss_pred             cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhc-CCCEEEEe
Confidence            89999999999999999999999999999999999999999999999999999877 99999999999984 89999999


Q ss_pred             CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (423)
Q Consensus       226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~  302 (423)
                      |||||||..++.++++++++.   +.+||+||+|.+|.. .+....+..++|+++++||||+||++|+|+||++++++++
T Consensus       153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i  231 (356)
T COG0079         153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELI  231 (356)
T ss_pred             CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence            999999999999999999986   789999999999997 5555555567889999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHH
Q 014492          303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      +.+.+.+.+|++|.+++.++.+++.+.+++++.++.+.+.|+++.+.|++++ +. +.|+.+||++++++... +..+.+
T Consensus       232 ~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~~-~~~l~~  309 (356)
T COG0079         232 AALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDAE-AAALAE  309 (356)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCcc-HHHHHH
Confidence            9999999999999999999999999999999999999999999999999998 55 88999999999998644 678999


Q ss_pred             HHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|.++||.||.+.. +..++|+||++++.+++++|.++|+.+
T Consensus       310 ~L~~~giivR~~~~~~~~~~~lRitvgt~een~~ll~AL~~~  351 (356)
T COG0079         310 ALLKKGILVRDCSSVGLLPGYLRITVGTPEENDRLLAALREV  351 (356)
T ss_pred             HHHHCCEEEEeCCCCCCCCCeEEEEeCCHHHHHHHHHHHHHH
Confidence            99999999999865 456789999999999999999999864

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.3e-53  Score=413.57  Aligned_cols=341  Identities=32%  Similarity=0.533  Sum_probs=296.5

Q ss_pred             HHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCC
Q 014492           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESD  147 (423)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~  147 (423)
                      ..+..+.+|.+........+.++  ..++|+|+.|+|++++++.+++++.+. .....||+.|..+||++++++++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~~~~~~   82 (366)
T PRK01533          5 DQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKLHVKME   82 (366)
T ss_pred             hhhhcCCCCCCCCChHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHhCCCcc
Confidence            44555666655544444444433  357899999999999999999998763 233568988999999999999999999


Q ss_pred             cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      +|++|+|+++++.+++++++++||.|+++.|+|..|...++..|++++.+|.+ ++.+|++++++.+. ++++++++|||
T Consensus        83 ~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-~~~~~v~i~~P  160 (366)
T PRK01533         83 QVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-NDTKIVWICNP  160 (366)
T ss_pred             eEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-cCCcEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999985 45799999999886 68999999999


Q ss_pred             CCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      |||||.+++.+++++|++.   +.++|+||+|.+|.+.+   +....+...+++++++||||.||++|+|+||+++++++
T Consensus       161 ~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~  240 (366)
T PRK01533        161 NNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL  240 (366)
T ss_pred             CCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHH
Confidence            9999999999999999885   56788999999887543   23344445789999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      ++.+.+...++++|.++|.++.++|++.+|.++.++.++++++++.+.|+.++ +.+.+++++|+|++++   ++.++.+
T Consensus       241 ~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~~~~nf~~~~~~---~~~~~~~  316 (366)
T PRK01533        241 IEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQSQTNFIFLPVE---NGGEIYE  316 (366)
T ss_pred             HHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCcCcEEEEeCC---CHHHHHH
Confidence            99999888889999999999999999988999999999999999999998875 5667889999999986   5678999


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|+++||.|+++     ++++||++++.+++++|.++|+.+
T Consensus       317 ~l~~~GI~Vr~~-----~~~iRis~~~~~~~~~l~~al~~~  352 (366)
T PRK01533        317 ACAHAGFIIRPF-----PNGVRITVGTREQNEGVISVLQQH  352 (366)
T ss_pred             HHHHCCcEEccC-----CCceEEeCCCHHHHHHHHHHHHHH
Confidence            999999999984     478999999999999999999864

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=5e-53  Score=411.62  Aligned_cols=325  Identities=29%  Similarity=0.455  Sum_probs=284.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHh----C--CCCCc-EEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~----g--~~~~~-i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.|++++++|+.+.+++.+ +..+  +.|+..|.++||+++++++    |  +++++ |++|+|+++++..++.
T Consensus        28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~  107 (393)
T COG0436          28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL  107 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence            6899999999999999999988876 3333  3447779999999999986    3  45655 9999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++++|||+|++++|.|+.|....+.+|++++.++++   ++|.+|++++++++++ ++|+|++|+||||||.+++.++++
T Consensus       108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav~~~~~l~  186 (393)
T COG0436         108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAVYSKEELK  186 (393)
T ss_pred             HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcCCCHHHHH
Confidence            999999999999999999999999999999999953   4899999999999984 999999999999999999999999


Q ss_pred             HHHcC----CCEEEEccCCccccCCCc-hhhhhc--c-CCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC-
Q 014492          242 KILEM----PILVVLDEAYTEFSGLES-RMEWVK--K-HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-  311 (423)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~-~~~~~~--~-~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-  311 (423)
                      +|++.    +++||.||+|.++.+++. +...+.  . .+++|+++||||.|+++|||+||++++ +++++.+.+.+.. 
T Consensus       187 ~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~  266 (393)
T COG0436         187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL  266 (393)
T ss_pred             HHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence            99886    999999999999998763 333332  2 478999999999999999999999999 8888888866554 


Q ss_pred             -CCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCe-ec-CCCceEEEEEeCCCCCHHHHHHHHH-
Q 014492          312 -YNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLN-PY-PSYSNFILCEVTSGMDAKKLKDDLA-  384 (423)
Q Consensus       312 -~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-p~~~~~~~~~~~~~~~~~~l~~~L~-  384 (423)
                       ++.+.+.|.++.++|+.+   ++.+.+++.++++|+.+.+.|.+++++. .. |.+++|+|++++...++.+|+.+|+ 
T Consensus       267 ~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~  346 (393)
T COG0436         267 TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLE  346 (393)
T ss_pred             ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHH
Confidence             578999999999999975   4778888999999999999999988554 45 6799999999987689999999988 


Q ss_pred             hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          385 KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       385 ~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++||.|.||..++   ++++|||+++...  +.+.++++++
T Consensus       347 ~~gV~v~PG~~Fg~~~g~~~vRis~~~~~--~~l~~a~~rl  385 (393)
T COG0436         347 EAGVAVVPGSGFGEPPGEGYVRLSLATSE--ETLEEALRRL  385 (393)
T ss_pred             hCCEEEecccccCCCCCCCeEEEEEecCH--HHHHHHHHHH
Confidence            7899999998854   4589999999876  7788888876

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.5e-52  Score=401.92  Aligned_cols=337  Identities=31%  Similarity=0.541  Sum_probs=292.3

Q ss_pred             hhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCC
Q 014492           65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL  144 (423)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~  144 (423)
                      .+.+..+..+.+|.+...       .  .....++|+.|+|++++++.+     ......+||++...+|++++++++|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~-------~--~~~~~~~l~~Nenp~~~~~~~-----~~~~~~~Yp~~~~~~l~~~~a~~~g~   72 (351)
T PRK01688          7 DLARENVRALTPYQSARR-------L--GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAAYAGV   72 (351)
T ss_pred             HHhhHHhhcCCCCCCCCc-------c--CCCCceEecCCCCCCCCChhh-----cccccccCCCCChHHHHHHHHHHhCC
Confidence            345667777777754321       1  122359999999999988764     11223679999889999999999999


Q ss_pred             CCCcEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492          145 ESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (423)
Q Consensus       145 ~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~  223 (423)
                      ++++|++|+|+++++.+++++++++| |.|+++.|+|..|...++..|++++.+|.++++.+|++++++.+  .++++|+
T Consensus        73 ~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~--~~~~lv~  150 (351)
T PRK01688         73 KPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL--DGVKVVY  150 (351)
T ss_pred             CHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc--cCCcEEE
Confidence            99999999999999999999999997 89999999999999999999999999998778899999999987  3799999


Q ss_pred             EcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492          224 LTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       224 l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      +||||||||.+++.+++++|++.   +.+||+||+|.+|....+....+..++++++++||||.||++|+|+||++++++
T Consensus       151 l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~  230 (351)
T PRK01688        151 VCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEE  230 (351)
T ss_pred             EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHH
Confidence            99999999999999999999875   689999999999985545555566678999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCCCCCHH
Q 014492          301 IIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAK  377 (423)
Q Consensus       301 ~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~~~~~~  377 (423)
                      +++.+.+...+|+++.+++.++..+|.+.  +++++.++.++++|+++.+.|++++++ .+.|++++|+|++++   +++
T Consensus       231 ~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---~~~  307 (351)
T PRK01688        231 VINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT---ASS  307 (351)
T ss_pred             HHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHH
Confidence            99999998888999999999999999863  678888899999999999999998766 478999999999986   578


Q ss_pred             HHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          378 KLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       378 ~l~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      ++.+.|.++||.|++++. ++.++|+||++++.++++.|.++|+
T Consensus       308 ~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~~~~e~~~l~~al~  351 (351)
T PRK01688        308 AVFKSLWDQGIILRDQNKQPGLSNCLRITIGTREECQRVIDALR  351 (351)
T ss_pred             HHHHHHHHCCeEEEECCCcCCCCCeEEEeCCCHHHHHHHHHhhC
Confidence            899999999999998765 4567899999999999999988874

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-51  Score=401.13  Aligned_cols=347  Identities=39%  Similarity=0.633  Sum_probs=302.2

Q ss_pred             HHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCC
Q 014492           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESD  147 (423)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~  147 (423)
                      +++..+.++.+...+...+++++.+  ++++|+.|+++++++|.+.+++.+. .....||+.+.+++|++++++++++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~~~~~~   82 (359)
T PRK03158          5 EQLNQLSAYQPGKSIEEVKREYGLE--KIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHLGVDEE   82 (359)
T ss_pred             hhhhccCCCCCCCCHHHHHHhcCCC--ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCCCHH
Confidence            3445556665545555566666654  7899999999999999999988763 333456888899999999999999999


Q ss_pred             cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      +|++|+|+++++..++++++++||.|++++|+|+.|...++..|++++.+|.+ ++++|++++++.+. ++++++++++|
T Consensus        83 ~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~i~~p  160 (359)
T PRK03158         83 QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNP  160 (359)
T ss_pred             HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-CCCCEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999986 57899999999886 68999999999


Q ss_pred             CCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      |||||.+++.+++.++++.   ++++|+||+|.+|.+++   ......+..+++++++||||.||++|+|+||+++++++
T Consensus       161 ~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~  240 (359)
T PRK03158        161 NNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL  240 (359)
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH
Confidence            9999999999999999975   89999999999987543   22344455789999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      ++.+.+....++.+.++|.++..+|++.+|.++.++.++++++++.+.|++.+ +...|++|+|+|++++  .++.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~i~~~~~--~~~~~~~~  317 (359)
T PRK03158        241 IEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNFIFVDTG--RDANELFE  317 (359)
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcEEEEECC--CCHHHHHH
Confidence            99999888888999999999999999888999988999999999999998874 5567888999999984  46889999


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|.++||.++++..++.++++||+++..++++++.++|+++
T Consensus       318 ~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~~  358 (359)
T PRK03158        318 ALLKKGYIVRSGAALGFPTGVRITIGLKEQNDKIIELLKEL  358 (359)
T ss_pred             HHHHCCeEEeeCCCCCCCCeEEEecCCHHHHHHHHHHHHHh
Confidence            99999999999887666789999999999999999999875

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.4e-51  Score=396.41  Aligned_cols=341  Identities=33%  Similarity=0.509  Sum_probs=292.0

Q ss_pred             hcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcE
Q 014492           71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHI  149 (423)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i  149 (423)
                      +....++.++.....+++.++..+.++++|+.|+|+++++|.+.+++.+ .....+||+.+..+||+++++++++++++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I   85 (357)
T PRK14809          6 LSDHVAYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADLTAALADRWDVSPEQV   85 (357)
T ss_pred             hhcCCCcCCCCCHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHhCCCcceE
Confidence            4445555445556677888887778899999999999999999988876 333367888888999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       150 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      ++|+|+++++.+++++++++||.|++++|+|..|...++..|++++.++.+  +++.+|++++++..  .++|+|++|||
T Consensus        86 ~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~--~~~k~i~l~~p  163 (357)
T PRK14809         86 WLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY--DGERIVYLTSP  163 (357)
T ss_pred             EECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh--cCCcEEEEeCC
Confidence            999999999999999999999999999999999988888899999988863  45778888887765  36899999999


Q ss_pred             CCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492          228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~  304 (423)
                      |||||.+++.+++++|++.   +++||+||+|.+|.+.++........+++++++||||.||++|+|+||++++++++++
T Consensus       164 ~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~  243 (357)
T PRK14809        164 HNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADA  243 (357)
T ss_pred             CCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHH
Confidence            9999999999999999886   7899999999999875544444455689999999999999999999999999999999


Q ss_pred             HHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH
Q 014492          305 LWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       305 l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      +.+...+++.+.++|.++..+|.+.+|+++.++.++++++.+.+.|+...    .|++|+|+|++++   +..++.+.|.
T Consensus       244 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~---~~~~~~~~l~  316 (357)
T PRK14809        244 YARVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPT----WESAGNFVLAEVG---DASAVAEAAQ  316 (357)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECC---CHHHHHHHHH
Confidence            99888788899999999999999888999999999999999999997642    3788999999985   5788999998


Q ss_pred             hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014492          385 KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       385 ~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      ++||.|+++..++.++++||+++..+++++..+.|+
T Consensus       317 ~~gv~v~~g~~f~~~~~iRls~~~~~~~~~~l~~L~  352 (357)
T PRK14809        317 ERGVIVRDCTSFGLPECIRITCGTREETERAVEVLN  352 (357)
T ss_pred             HCCEEEEECccCCCCCeEEEecCCHHHHHHHHHHHH
Confidence            999999999877667899999987655444444443

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.4e-50  Score=392.34  Aligned_cols=350  Identities=36%  Similarity=0.632  Sum_probs=300.8

Q ss_pred             HHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCC
Q 014492           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLE  145 (423)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~  145 (423)
                      ++.++..+.++.+...+...+..++  +.++++|+.|+|++++++.+.+++.+. .....|+++...+||++++++++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~   87 (371)
T PRK05166         10 ARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGRALREAIAARTGVP   87 (371)
T ss_pred             hhHHHhcCCCCCCCCCHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCcC
Confidence            4456667777766666665555554  357899999999999999999988763 2335788765469999999999999


Q ss_pred             CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      +++|++|+|+++++..++.+++++||.|+++.|+|..+...++..|++++.++.+.++++|++++++.++ .++++++++
T Consensus        88 ~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~  166 (371)
T PRK05166         88 ADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-RAPRMLMFS  166 (371)
T ss_pred             HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-cCCCEEEEe
Confidence            9999999999999999999999999999999999999999999999999999987778999999999986 588999999


Q ss_pred             CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhc-cCCcEEEEccChhhhcccCcccccccc-
Q 014492          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF-  297 (423)
Q Consensus       226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~-  297 (423)
                      |||||||.+++.+++++|++.   +++||+||+|.+|.++.   +...... ..+++++++||||.||++|+|+||+++ 
T Consensus       167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~  246 (371)
T PRK05166        167 NPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS  246 (371)
T ss_pred             CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence            999999999999999999885   78999999999988543   2222222 346899999999999999999999775 


Q ss_pred             CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHH
Q 014492          298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAK  377 (423)
Q Consensus       298 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~  377 (423)
                      ++++++.+.+....++++.++|.++..++.+.+|+++.++.++++++++.+.|++.+ +.+.|++|+|+|++++  .++.
T Consensus       247 ~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~p~~g~fl~~~~~--~~~~  323 (371)
T PRK05166        247 DPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-YRIAPSRANFLFFDAR--RPAS  323 (371)
T ss_pred             CHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeCCCcCCEEEEeCC--CCHH
Confidence            788888888877778899999999999998888999999999999999999999885 4567888999999975  3678


Q ss_pred             HHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.+.|.++||.++++..++.++++||+++..+++++|.++|+++
T Consensus       324 ~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i  368 (371)
T PRK05166        324 AVAEALLRQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV  368 (371)
T ss_pred             HHHHHHHHCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence            899999999999999876666899999999988899999999876

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=9.8e-50  Score=388.42  Aligned_cols=335  Identities=30%  Similarity=0.446  Sum_probs=285.9

Q ss_pred             hHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ....+...+....++++|+.|+|++++++.+.+++.+ +.....||+++..+||+++|+++++++++|++|+|+++++.+
T Consensus        10 ~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~   89 (360)
T PRK07392         10 LAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPDPDYRELRLALAQHHQLPPEWILPGNGAAELLTW   89 (360)
T ss_pred             HHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence            3444556677777899999999999999999998876 333467887777899999999999999999999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCC-----CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-----LNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~-----~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      +++.+. +||.|+++.|+|..|...++..|++++.+|.+.++.     .|++++++..  .+++++++||||||||.+++
T Consensus        90 ~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~~~~  166 (360)
T PRK07392         90 AGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGKLWS  166 (360)
T ss_pred             HHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCCCCcC
Confidence            999764 688999999999999999999999999999754333     4677776654  46899999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC
Q 014492          237 DEDLLKILEMPILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (423)
Q Consensus       237 ~~~l~~i~~~~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~  313 (423)
                      .+++.++++...++|+||+|.+|.+++.   ....++..+++++++||||.||++|+|+||+++++++++.+.+....++
T Consensus       167 ~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~  246 (360)
T PRK07392        167 REAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRDPWP  246 (360)
T ss_pred             HHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCCCCC
Confidence            9999999988335777999999976432   2333455679999999999999999999999999999999888777789


Q ss_pred             CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEe
Q 014492          314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH  392 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~  392 (423)
                      ++.++|.++..+|++.+|.+..++.++++++++.+.|++++++.+.+++++|+|++++.  ++.++.+.+. ++||.+++
T Consensus       247 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~--~~~~l~~~ll~~~gv~v~p  324 (360)
T PRK07392        247 VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQG--SALQLQEKLLQQHRILIRD  324 (360)
T ss_pred             CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCC--CHHHHHHHHHhhCCEEEEe
Confidence            99999999999999888888888889999999999999887777778889999999863  6788988865 78999999


Q ss_pred             CCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          393 YNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       393 ~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +..++  .++|+||+++..+++++|.++++++
T Consensus       325 g~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~  356 (360)
T PRK07392        325 CLSFPELGDRYFRVAVRTEAENQRLLEALAAI  356 (360)
T ss_pred             CCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            88643  3579999999988789999999875

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.9e-50  Score=388.71  Aligned_cols=323  Identities=38%  Similarity=0.619  Sum_probs=288.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCC
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPG  170 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~g  170 (423)
                      .++++|+.|+|++++++.+++++.+ +..  ..+||+++..+||+++++++++++ ++|++|+|+++++..++++++++|
T Consensus        26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~g  105 (356)
T PRK04870         26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPG  105 (356)
T ss_pred             CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999986 322  367888888999999999999865 489999999999999999999999


Q ss_pred             CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCE
Q 014492          171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (423)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~  249 (423)
                      |+|+++.|+|..|...++..|++++.+|.++++.+|++++++.+.+.++++|++|+||||||.+++.+++++|++. +.+
T Consensus       106 d~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~  185 (356)
T PRK04870        106 ATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGL  185 (356)
T ss_pred             CEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCE
Confidence            9999999999999999999999999999887889999999999975689999999999999999999999999988 889


Q ss_pred             EEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh
Q 014492          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (423)
Q Consensus       250 li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~  329 (423)
                      +|+||+|.+|.+.. ....+...+++++++|||| ++++|+|+||+++++++++.+......++++.++|.++..++++.
T Consensus       186 ii~De~y~~~~~~~-~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~~  263 (356)
T PRK04870        186 VVVDEAYQPFAGDS-WLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEHV  263 (356)
T ss_pred             EEEECCchhhcCcc-hHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCCcCCHHHHHHHHHHHhCH
Confidence            99999999887532 2233455678999999999 899999999999999999999888777899999999999999887


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCeEEEEec
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGYVRVSVG  407 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--~~~~~iRis~~  407 (423)
                      +++++.+++++++++.+.+.|++++++.+.|.+++|+|++++   +..++.+.|.++||.|+++..+  ..++++||+++
T Consensus       264 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~  340 (356)
T PRK04870        264 DVLDAQAAQLRAERTRLAAALAALPGVTVFPSAANFILVRVP---DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG  340 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC
Confidence            778888999999999999999988666777889999999986   5678999999999999987653  34789999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014492          408 KPEHTDALMECLMHL  422 (423)
Q Consensus       408 ~~~~~~~l~~al~~l  422 (423)
                      +.+++++|.++|+.+
T Consensus       341 ~~~~~~~l~~al~~~  355 (356)
T PRK04870        341 TPEENAQFLAALKAA  355 (356)
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999999875

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2e-49  Score=384.77  Aligned_cols=322  Identities=39%  Similarity=0.641  Sum_probs=284.1

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~  172 (423)
                      ..++|+.|++++++++.+.+++.+. .  ...+|++++..++|+++++++++++++|++|+|+++++..++..++++||+
T Consensus        23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~  102 (351)
T PRK14807         23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDV  102 (351)
T ss_pred             ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCE
Confidence            3589999999999999999998762 2  235688777889999999999999999999999999999999999999999


Q ss_pred             EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (423)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li  251 (423)
                      |+++.|+|..+...++..|++++.++.++++++|++++++.+.+.++|+|+++|||||||.+++.+++.++++. +.++|
T Consensus       103 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~i  182 (351)
T PRK14807        103 VIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVV  182 (351)
T ss_pred             EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEE
Confidence            99999999999999999999999999877789999999999975589999999999999999999999999987 78899


Q ss_pred             EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH
Q 014492          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (423)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~  331 (423)
                      +||+|.+|. +..........+++++++||||.||++|+|+||+++++++++.+...+..++++.++|.++..++++ .+
T Consensus       183 vDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~  260 (351)
T PRK14807        183 VDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLRT-GV  260 (351)
T ss_pred             EeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCCCCcCHHHHHHHHHHHhH-HH
Confidence            999999875 3333333445689999999999999999999999999999999988877888999999999999986 46


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChh
Q 014492          332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPE  410 (423)
Q Consensus       332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~  410 (423)
                      +++..+.++++++++.+.|++++++.+.|++|+|+|++++   +.+++++.|.++||.|+++.. ...++++||+++..+
T Consensus       261 ~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~~~i~~~---~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~~~~  337 (351)
T PRK14807        261 LKERVNYILNERERLIKELSKIPGIKVYPSKTNFILVKFK---DADYVYQGLLERGILVRDFSKVEGLEGALRITVSSCE  337 (351)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCcEECcCCccEEEEEcC---CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcCCHH
Confidence            7777788889999999999887666777888999999996   578889999999999998754 455789999999999


Q ss_pred             hHHHHHHHHhhh
Q 014492          411 HTDALMECLMHL  422 (423)
Q Consensus       411 ~~~~l~~al~~l  422 (423)
                      ++++|.++|+++
T Consensus       338 ~~~~l~~~l~~~  349 (351)
T PRK14807        338 ANDYLINGLKEL  349 (351)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-49  Score=389.93  Aligned_cols=318  Identities=33%  Similarity=0.553  Sum_probs=270.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CC---CCCCCCcchHHHHHHHHHHhC--------CCCCcEEEeCCHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KF---PYIYPDPESRRLRAALAKDSG--------LESDHILVGCGADELIDLIM  163 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~---~~~Y~~~g~~~lr~~ia~~~g--------~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+++|+.|++++++++.+.+++.+. ..   ..+||+.|..+||++++++++        +++++|++|+|+++++..++
T Consensus        29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~  108 (374)
T PRK02610         29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLL  108 (374)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHH
Confidence            4799999999999999999998762 22   256888889999999999986        78899999999999999888


Q ss_pred             HHhcCCCC-eEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHH
Q 014492          164 RCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       164 ~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      .+++.+|| .|+++.|+|..|...++..|++++.++.++ ++++|++++++.+.+   .++|+|++||||||||.+++.+
T Consensus       109 ~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~  188 (374)
T PRK02610        109 IATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAA  188 (374)
T ss_pred             HHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHH
Confidence            88888886 899999999999999999999999999754 589999999998864   5899999999999999999999


Q ss_pred             HHHHHHcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcH
Q 014492          239 DLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV  316 (423)
Q Consensus       239 ~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~  316 (423)
                      +++++++.  +++||+||+|.+|.+. .....+...+++|+++||||.||++|+|+||+++++++++.+.+.+..++++.
T Consensus       189 ~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~~~~~  267 (374)
T PRK02610        189 ELEWLRSLPEDILVVIDEAYFEFSQT-TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPYNLPS  267 (374)
T ss_pred             HHHHHHhccCCcEEEEeccccccCcc-chHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCCCCCH
Confidence            99999876  8999999999998653 23334445678999999999999999999999999999999998887889999


Q ss_pred             HHHHHHHHHhCChHH-HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492          317 AAEVAACAALQNPIY-LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  395 (423)
Q Consensus       317 ~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~  395 (423)
                      ++|.++..++++.++ .+.+++. .+.++.+.+.|++++++.+.|++|+|+|++++++.+..++++.|.++||.|+++  
T Consensus       268 ~~q~a~~~~l~~~~~~~~~~~~~-~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~--  344 (374)
T PRK02610        268 FSQLAAQLALEHRQELLAAIPEI-LQERDRLYQALQELPQLRVWPSAANFLYLRLSQDAALAALHQALKAQGTLVRHT--  344 (374)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHHhCCCcEeCCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeC--
Confidence            999999999988544 4444444 455788889998876666679999999999987778899999999999999864  


Q ss_pred             CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          396 KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       396 ~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                         ++++||+++..+++++..+.|+
T Consensus       345 ---~~~lRls~~~~~~~~~~l~~l~  366 (374)
T PRK02610        345 ---GGGLRITIGTPEENQRTLERLQ  366 (374)
T ss_pred             ---CCeEEEeCCCHHHHHHHHHHHH
Confidence               4799999998655444444443

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-49  Score=386.86  Aligned_cols=318  Identities=35%  Similarity=0.542  Sum_probs=278.5

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC-CeEE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIV  174 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl  174 (423)
                      ..++++.|++++++++...      ....+||+++..+||+++++++++++++|++|+|+++++.+++++++.+| |.|+
T Consensus        32 ~~~~~~~ne~~~~~~~~~~------~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vl  105 (364)
T PRK04781         32 GDVWLNANESAWANPADPD------ASTRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVL  105 (364)
T ss_pred             CCEEeeCCCCCCCCChhhc------chhccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEE
Confidence            4589999999998876421      12367888888999999999999999999999999999999999999999 7999


Q ss_pred             EcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CC
Q 014492          175 DCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PI  248 (423)
Q Consensus       175 ~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~  248 (423)
                      +++|+|..|...++..|++++.+|.+   +++.+|++++++.+.+.++++|++||||||||.+++.++++++++.   ++
T Consensus       106 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~  185 (364)
T PRK04781        106 VTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKA  185 (364)
T ss_pred             EcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCc
Confidence            99999999999889999999999963   2466799998776644789999999999999999999999999885   78


Q ss_pred             EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC
Q 014492          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (423)
Q Consensus       249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~  328 (423)
                      +||+||+|.+|.+.++.....+..+++++++||||.||++|+|+||+++++++++.+.+.+.+++++.++|.++..+|++
T Consensus       186 ~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~  265 (364)
T PRK04781        186 LVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSA  265 (364)
T ss_pred             EEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhc
Confidence            99999999999865555555566789999999999999999999999999999999999988999999999999999987


Q ss_pred             h--HHHHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-CCCCCeEEE
Q 014492          329 P--IYLEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-KELKGYVRV  404 (423)
Q Consensus       329 ~--~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~~~~~~iRi  404 (423)
                      .  ++..+..+.++++|+.+.+.|++++++ .+.|++|+|+|++++   +..++.+.|.++||.|+++.. ++.++|+||
T Consensus       266 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~---~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ri  342 (364)
T PRK04781        266 PALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---DAEAAFQALLAAGVVVRDQRAAPRLSDALRI  342 (364)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEE
Confidence            5  456666778899999999999988555 468999999999996   568899999999999999875 455789999


Q ss_pred             EecChhhHHHHHHHHhhh
Q 014492          405 SVGKPEHTDALMECLMHL  422 (423)
Q Consensus       405 s~~~~~~~~~l~~al~~l  422 (423)
                      +++.++++++|.++|+.+
T Consensus       343 s~~~~~~~~~l~~al~~~  360 (364)
T PRK04781        343 TLGTPEQNDRVLAALQRT  360 (364)
T ss_pred             eCCCHHHHHHHHHHHHHH
Confidence            999999999999999876

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-49  Score=386.79  Aligned_cols=316  Identities=30%  Similarity=0.465  Sum_probs=277.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC-CeE
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKI  173 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g-d~V  173 (423)
                      .+.++|+.|+|++++++.+     ......+||+++..+||+++|+++|+++++|++|+|+++++.+++++++++| |.|
T Consensus        31 ~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~v  105 (354)
T PRK04635         31 RGDIWINANESPFNNEYKL-----DLARLNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSI  105 (354)
T ss_pred             CCcEEeeCCCCCCCCChhh-----hhHHhccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeE
Confidence            4569999999999988754     1112367998888999999999999999999999999999999999999998 899


Q ss_pred             EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEE
Q 014492          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVV  251 (423)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li  251 (423)
                      +++.|+|..|...++..|++++.+|.++++.+|++.++. +  .++|+|++||||||||.+++.+++++|++.  +++||
T Consensus       106 lv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vi  182 (354)
T PRK04635        106 ACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVV  182 (354)
T ss_pred             EEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEE
Confidence            999999999999999999999999987778999999873 3  489999999999999999999999999986  79999


Q ss_pred             EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh--
Q 014492          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP--  329 (423)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--  329 (423)
                      +||+|.+|....+........+++++++||||.||++|+|+||+++++++++.+.+...+++.+.+.|.++.++|.+.  
T Consensus       183 vDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~  262 (354)
T PRK04635        183 VDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAPYPVPLPVSEIATQALSEAGL  262 (354)
T ss_pred             EeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhcccH
Confidence            999999987544444444557899999999999999999999999999999999887778889999999999999763  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP  409 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~  409 (423)
                      +++++.++.++++++++.+.|++++++.+.|++|+|+|++++   +..++.+.|.++||.++.++.+..++++|||+++.
T Consensus       263 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~~~  339 (354)
T PRK04635        263 ARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVLAKFD---DVDAVFKALWDAGIVARAYKDPRLANCIRFSFSNR  339 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEEEECC---CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeCCH
Confidence            567777888999999999999998766677888999999986   57788888889999999876555678999999999


Q ss_pred             hhHHHHHHHHhh
Q 014492          410 EHTDALMECLMH  421 (423)
Q Consensus       410 ~~~~~l~~al~~  421 (423)
                      ++++.|.++|++
T Consensus       340 e~~~~l~~al~~  351 (354)
T PRK04635        340 AETDKLIGLIRN  351 (354)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999875

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.1e-49  Score=385.49  Aligned_cols=350  Identities=43%  Similarity=0.696  Sum_probs=304.3

Q ss_pred             hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCC
Q 014492           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL  144 (423)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~  144 (423)
                      .+.+++..+.++.+.+......++++.++.++|+|+.|+|+++++|.+.+++.+ ......||++..+++|+++++++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~   84 (361)
T PRK00950          5 KIRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEPDAPELREALSKYTGV   84 (361)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC
Confidence            345667777777666666667788887777899999999999999999888876 3333668887779999999999999


Q ss_pred             CCCcEEE-eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492          145 ESDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (423)
Q Consensus       145 ~~~~i~~-t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~  223 (423)
                      ++++|++ |+|+++++..+++.++++||.|+++.|+|..+...++..|++++.++.++++.+|++++++.+. .++++++
T Consensus        85 ~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~  163 (361)
T PRK00950         85 PVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIF  163 (361)
T ss_pred             CHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-cCCCEEE
Confidence            9999999 8999999999999899999999999999999998889999999999977778999999999986 5899999


Q ss_pred             EcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492          224 LTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (423)
Q Consensus       224 l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~  302 (423)
                      +++|+||||.+++.+++.++++. |+++|+||+|.+|.. ..........+++++++||||.||++|+|+||++++++++
T Consensus       164 ~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~  242 (361)
T PRK00950        164 LCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLI  242 (361)
T ss_pred             EeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHH
Confidence            99999999999999999999987 999999999998863 2333334456789999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHH
Q 014492          303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD  382 (423)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~  382 (423)
                      +.+.+...+++.+.++|.++..++++.+++++.+++++++++++.+.|+    +.+.|++++|+|++++ +.++.++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~~~~~~~i~~~~~-~~~~~~~~~~  317 (361)
T PRK00950        243 DYYMRAKTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVYPSEANFVLVDVT-PMTAKEFCEE  317 (361)
T ss_pred             HHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeECCCcceEEEEECC-CCCHHHHHHH
Confidence            9999888888899999999999999888889999999999999988886    3456788999999994 6789999999


Q ss_pred             HHhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          383 LAKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       383 L~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++||.++++..+  ..++++||++++.++++++.++|+++
T Consensus       318 l~~~gv~v~~~~~f~~~~~~~lRis~~~~~~~~~l~~~L~~i  359 (361)
T PRK00950        318 LLKRGVIVRDCTSFRGLGDYYIRVSIGTFEENERFLEILKEI  359 (361)
T ss_pred             HHHCCEEEeeCCccCCCCCCeEEEECCCHHHHHHHHHHHHHH
Confidence            99999999987653  23679999999988899999999864

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2e-49  Score=387.03  Aligned_cols=325  Identities=32%  Similarity=0.507  Sum_probs=284.0

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      .+++|+.|++++++++.+.+++.+. ....+|++++..+||+++|+++++++++|++|+|+++++..++..++++||.|+
T Consensus        33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vl  112 (369)
T PRK08153         33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVV  112 (369)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence            4579999999999999999998763 223568877788999999999999999999999999999999999999999999


Q ss_pred             EcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEE
Q 014492          175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVV  251 (423)
Q Consensus       175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li  251 (423)
                      ++.|+|+.+...++..|++++.+|.+++ .+|++++++.+...+++++++|+||||||.+++.+++.+|++.   +++||
T Consensus       113 v~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI  191 (369)
T PRK08153        113 TSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLV  191 (369)
T ss_pred             ECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence            9999999999888899999999997544 6899999887765789999999999999999999999999875   89999


Q ss_pred             EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH
Q 014492          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (423)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~  331 (423)
                      +||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++..+|++++|
T Consensus       192 ~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~  271 (369)
T PRK08153        192 LDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY  271 (369)
T ss_pred             EeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH
Confidence            99999998865433333334678999999999999999999999999999999988888899999999999999998889


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014492          332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE  410 (423)
Q Consensus       332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~  410 (423)
                      +++.++.++++++++.+.|++.+. ...|++++|+|++++ +...+.++.+.|.++||.++..+....++++||+++..+
T Consensus       272 ~~~~~~~~~~~r~~~~~~L~~~g~-~~~p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~~~~  350 (369)
T PRK08153        272 LAEVVGKIAAARDRIAAIARANGL-TPLPSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCGPDE  350 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-ccCCCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecCCHH
Confidence            999999999999999999998763 456889999999985 245678999999999999963332334679999999999


Q ss_pred             hHHHHHHHHhhh
Q 014492          411 HTDALMECLMHL  422 (423)
Q Consensus       411 ~~~~l~~al~~l  422 (423)
                      +++.+.++++++
T Consensus       351 ~~~~~~~al~~~  362 (369)
T PRK08153        351 ELDLFAEALPEA  362 (369)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.9e-49  Score=383.79  Aligned_cols=334  Identities=28%  Similarity=0.507  Sum_probs=288.6

Q ss_pred             chHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           82 PFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        82 ~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      .+..++++.|....++++|+.|++++++++.+.+++.+. ....+||+++..+||+++++++++++++|++|+|+++++.
T Consensus         6 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~   85 (354)
T PRK06358          6 NINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVEYPDPDYLELRKRIASFEQLDLENVILGNGATELIF   85 (354)
T ss_pred             cHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHH
Confidence            355567778877677899999999999999999998873 3346788888889999999999999999999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      .+++.+ .+ +.|+++.|+|+.|...++..|++++.++.+.  ++.+| +++++.+. .+++++++++||||||.+++.+
T Consensus        86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~~P~NPtG~~~~~~  161 (354)
T PRK06358         86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLCNPNNPTGQLISKE  161 (354)
T ss_pred             HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEeCCCCCCCCccCHH
Confidence            999976 44 6899999999999999999999999999743  56788 66666665 5799999999999999999999


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcC
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ  310 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~  310 (423)
                      ++++|++.    ++++|+||+|.+|.+++.   .....+..+++++++||||.||++|+|+||++++ +.+++.+.+...
T Consensus       162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~  241 (354)
T PRK06358        162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE  241 (354)
T ss_pred             HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence            99988764    899999999999986542   2333445689999999999999999999999984 688899988888


Q ss_pred             CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014492          311 PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI  390 (423)
Q Consensus       311 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v  390 (423)
                      .++++.++|.++..+|++.+++++.++.++++++++.+.|++++++.+.+++|+|+|+++++   ..++++.|.++||.+
T Consensus       242 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~~---~~~~~~~l~~~gI~v  318 (354)
T PRK06358        242 PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLEK---PIDLRKELLKKGILI  318 (354)
T ss_pred             CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcCc---hHHHHHHHHHCCeEE
Confidence            89999999999999998888889999999999999999999886666667788999999973   478999999999999


Q ss_pred             EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          391 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       391 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++++.+ . .++++||+++..+++++|.++++++
T Consensus       319 ~~~~~f~~~~~~~iRls~~~~~~~~~l~~~l~~~  352 (354)
T PRK06358        319 RSCSNYRGLDENYYRVAVKSREDNKKLLKALEVI  352 (354)
T ss_pred             EECCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            998874 2 3579999999999999999999875

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=3.5e-49  Score=385.92  Aligned_cols=351  Identities=36%  Similarity=0.593  Sum_probs=303.5

Q ss_pred             HHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCC
Q 014492           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLE  145 (423)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~  145 (423)
                      .++++..+.++.+...+..+++++  ++.++++|+.|+++++++|.+.+++.+. .....||+....++|++++++++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~   83 (367)
T PRK02731          6 PNPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGSGFELKAALAEKFGVD   83 (367)
T ss_pred             chhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHhCcC
Confidence            345566677775555555555555  5567899999999999999998888763 2336788777789999999999999


Q ss_pred             CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492          146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       146 ~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      +++|++|+|+++++..++..++++||.|+++.|+|..|...++..|++++.+|. +++.+|++++++.++ .++++|+++
T Consensus        84 ~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~l~  161 (367)
T PRK02731         84 PERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT-PRTRLVFIA  161 (367)
T ss_pred             HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhC-CCCcEEEEe
Confidence            999999999999999999999999999999999999998888889999999997 457899999999996 689999999


Q ss_pred             CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC---chhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      |||||||.+++.+++.++++.   ++++|+||+|.++.+.+   ......+..+++++++||||.||++|+|+||+++++
T Consensus       162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~  241 (367)
T PRK02731        162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP  241 (367)
T ss_pred             CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence            999999999999999999986   89999999999877533   223334456789999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492          300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       300 ~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l  379 (423)
                      ++++.+.+...+++.+.++|.++..++++.+++++.++.++++++++.+.|++.+ +.+.|++++|+|+++++..++.++
T Consensus       242 ~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~i~~~~~~~~~~~  320 (367)
T PRK02731        242 EIIDALNRVRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPSVGNFILVDFDDGKDAAEA  320 (367)
T ss_pred             HHHHHHHHccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCCCceEEEEECCCCCCHHHH
Confidence            9999999888888899999999999999888889999999999999999999885 455577899999999767789999


Q ss_pred             HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.|.++||.++++..++.++++||++++.++++++.++|+++
T Consensus       321 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~e~~~l~~aL~~~  363 (367)
T PRK02731        321 YQALLKRGVIVRPVAGYGLPNALRITIGTEEENRRFLAALKEF  363 (367)
T ss_pred             HHHHHHCCEEEEeCCCCCCCCeEEEecCCHHHHHHHHHHHHHH
Confidence            9999999999999876555789999999999999999998764

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=2.4e-49  Score=386.05  Aligned_cols=322  Identities=30%  Similarity=0.432  Sum_probs=280.5

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~  172 (423)
                      .++.++|+.|+++++++|.+.+++.+. .....||+++..+||+++++++|+++++|++|+|+++++..++..++++||+
T Consensus        42 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~  121 (370)
T PRK09105         42 AEGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAG  121 (370)
T ss_pred             CCCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCE
Confidence            367799999999999999999998763 2335688777889999999999999999999999999999999999999999


Q ss_pred             EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCE
Q 014492          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL  249 (423)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~  249 (423)
                      |++++|+|..|...++..|++++.+|.++++.+|++++++..  .+++++++||||||||.+++.++++++++.   +++
T Consensus       122 Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~  199 (370)
T PRK09105        122 LVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD--PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSV  199 (370)
T ss_pred             EEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC--CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcE
Confidence            999999999999999999999999998777889999998773  578999999999999999999999999874   899


Q ss_pred             EEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh
Q 014492          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (423)
Q Consensus       250 li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~  329 (423)
                      ||+||+|.+|...++.....+..+++++++||||.||++|+|+||+++++++++.+.+. ..+..+.++|.++..+|.++
T Consensus       200 lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~  278 (370)
T PRK09105        200 LLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GHNPLPVPAAAAGLASLRDP  278 (370)
T ss_pred             EEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCH
Confidence            99999998886543334444457899999999999999999999999999999998877 55678889999999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecCh
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP  409 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~  409 (423)
                      +|+++.+++++++++++.+.|++.+ +.+.+++++|++++++  .+..++++.|.++||.+.... ...++|+||+++.+
T Consensus       279 ~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~~f~~~~~~--~~~~~l~~~L~~~gI~v~~~~-~~~~~~~Ris~~~~  354 (370)
T PRK09105        279 KLVPQRRAENAAVREDTIAWLKKKG-YKCTPSQANCFMVDVK--RPAKAVADAMAKQGVFIGRSW-PIWPNWVRVTVGSE  354 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCCcEEEEeCC--CCHHHHHHHHHHCCcEEecCC-CCCCCeEEEEcCCH
Confidence            8999999999999999999999875 4555677778788775  477899999998999994322 23478999999998


Q ss_pred             hhHHHHHHHHhhh
Q 014492          410 EHTDALMECLMHL  422 (423)
Q Consensus       410 ~~~~~l~~al~~l  422 (423)
                      +++++|.++++++
T Consensus       355 ~~~~~l~~al~~~  367 (370)
T PRK09105        355 EEMAAFRSAFAKV  367 (370)
T ss_pred             HHHHHHHHHHHHH
Confidence            8899999999865

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=5.9e-49  Score=382.25  Aligned_cols=337  Identities=26%  Similarity=0.421  Sum_probs=286.0

Q ss_pred             CCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHH
Q 014492           80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL  158 (423)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~a  158 (423)
                      +......+.+++.++.++++|+.|+|++++++.+++++.+ +.....||+.+..++|+++++++++++++|++|+|++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~   84 (356)
T PRK08056          5 GGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPASWILAGNGETES   84 (356)
T ss_pred             CccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcCccHHHHHHHHHHHhCcChhhEEECCCHHHH
Confidence            3445556777888778899999999999999999999876 222356888788999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      +..+++.+ .+|+ +++..|+|..|...++..|++++.+|.++  ++.+| +++++.+. +++|+|+++|||||||.+++
T Consensus        85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p~NPTG~~~~  160 (356)
T PRK08056         85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLPE  160 (356)
T ss_pred             HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCCcCCCCCCCC
Confidence            99999976 6776 67789999999999999999999999753  45555 45556665 78999999999999999999


Q ss_pred             HHHHHHHHcC----CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcC
Q 014492          237 DEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ  310 (423)
Q Consensus       237 ~~~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~  310 (423)
                      .+++++|++.    +++||+||+|.+|.+.. .....+...+++++++||||.||++|+|+||+++ ++++++.+.+...
T Consensus       161 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~  240 (356)
T PRK08056        161 RQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQM  240 (356)
T ss_pred             HHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC
Confidence            8888777654    89999999999987644 2333444567999999999999999999999998 4678888887777


Q ss_pred             CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014492          311 PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI  390 (423)
Q Consensus       311 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v  390 (423)
                      .++++.++|.++..++++.+|.++.++.++++++++.+.|++++++.+.|++++|+|++++.  +..++++.|+++||.|
T Consensus       241 ~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gI~v  318 (356)
T PRK08056        241 PWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFLRCER--PDIDLQRALLTQRILI  318 (356)
T ss_pred             CCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCC--ChHHHHHHHHHCCeEE
Confidence            78899999999999998888888889999999999999999886666778889999999963  4678999999999999


Q ss_pred             EeCCCC-C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          391 RHYNNK-E-LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       391 ~~~~~~-~-~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +++..+ + ..+||||+++..++++.|.++|+++
T Consensus       319 ~~~~~f~~~~~~~iRis~~~~~~~~~l~~~l~~~  352 (356)
T PRK08056        319 RSCANYPGLDSRYYRVAIRSAAENERLLAALRNV  352 (356)
T ss_pred             EECCCCCCCCCCEEEEEEcCHHHHHHHHHHHHHH
Confidence            998764 2 2479999999999999999999875

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5.4e-49  Score=382.59  Aligned_cols=320  Identities=32%  Similarity=0.569  Sum_probs=280.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~  172 (423)
                      .++|+|+.|++++++++.+.+++.+. . ....||+++.++||+++|+++++++++|++|+|+++++.+++++++++||.
T Consensus        24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~  103 (353)
T PRK05387         24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRP  103 (353)
T ss_pred             cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence            56799999999999999999998863 2 236788888899999999999999999999999999999999999999999


Q ss_pred             EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEE
Q 014492          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILV  250 (423)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~l  250 (423)
                      |++++|+|+.|...++..|++++.+|.++++.+|++++++     +.++++++|||||||.+++.+++.+|++.  ++++
T Consensus       104 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~l  178 (353)
T PRK05387        104 LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVV  178 (353)
T ss_pred             EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEE
Confidence            9999999999999999999999999987788999999863     35789999999999999999999999986  8999


Q ss_pred             EEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC---CCCCcHHHHHHHHHHhC
Q 014492          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQ  327 (423)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~a~~~~l~  327 (423)
                      |+||+|.+|... .........+++++++||||.||++|+|+||+++++++++++.+...   .++++.++|.++..++.
T Consensus       179 ivDe~y~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~  257 (353)
T PRK05387        179 VIDEAYVDFGGE-SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE  257 (353)
T ss_pred             EEeCcccccCCc-chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence            999999987532 33333445688999999999999999999999999999999887764   35788999999999998


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  407 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~  407 (423)
                      +.+++++.+++++++++++.+.|++++ +.+.|++++|+|++++ +.++.++.+.|.++||.++.+..+..++++||+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~  335 (353)
T PRK05387        258 DEAYFEETRAKVIATRERLVEELEALG-FEVLPSKANFVFARHP-SHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG  335 (353)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECCCcCcEEEEECC-CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC
Confidence            888889999999999999999999886 4567888999999987 56889999999999999987654445789999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014492          408 KPEHTDALMECLMHL  422 (423)
Q Consensus       408 ~~~~~~~l~~al~~l  422 (423)
                      ..++++++.++|+++
T Consensus       336 ~~~~~~~~~~~L~~~  350 (353)
T PRK05387        336 TDEEMEALVDALKEI  350 (353)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            888888888888764

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.2e-49  Score=387.44  Aligned_cols=330  Identities=23%  Similarity=0.339  Sum_probs=278.5

Q ss_pred             hCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHhC------CCC-CcEEEeCCHHHHH
Q 014492           90 LGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSG------LES-DHILVGCGADELI  159 (423)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~~g------~~~-~~i~~t~G~~~al  159 (423)
                      ....+.++++|+.|++++++++.+.+++.+. .  ..+.|++.|..+||++++++++      +++ ++|++|+|+++++
T Consensus        27 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al  106 (399)
T PRK07681         27 KIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL  106 (399)
T ss_pred             hhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence            3334567899999999999999998888763 2  2255666789999999999973      577 7999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .+++.+++++||.|++++|+|+.|...++..|++++.+|.++  +|.+|++++++.+. .++++|++||||||||.+++.
T Consensus       107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s~  185 (399)
T PRK07681        107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHE  185 (399)
T ss_pred             HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCcCcCCCH
Confidence            999999999999999999999999999999999999999753  46789999999886 689999999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~  309 (423)
                      +++++|++.    +++||+||+|.++.+++..   ...+. ..+++|+++||||.||++|+|+||+++++++++.+....
T Consensus       186 ~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~  265 (399)
T PRK07681        186 DFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFK  265 (399)
T ss_pred             HHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHH
Confidence            998888764    9999999999998764321   11122 346899999999999999999999999999999998776


Q ss_pred             C--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-
Q 014492          310 Q--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-  385 (423)
Q Consensus       310 ~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~-  385 (423)
                      .  .++++.+.|.++..+|++ .+|+++.++.++++++.+.+.|++.++....|.+|+|+|++++++.++.++.+.|.+ 
T Consensus       266 ~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~  345 (399)
T PRK07681        266 SNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDR  345 (399)
T ss_pred             hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHh
Confidence            4  478899999999999987 478889999999999999999998864323688999999999877788999999885 


Q ss_pred             CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +||.++++..+.  .++++||+++..  .+++.+++++|
T Consensus       346 ~gv~v~pg~~f~~~~~~~iRis~~~~--~~~~~~~l~~l  382 (399)
T PRK07681        346 ANVVVTPGHAFGPHGEGFVRIALVQD--EEVLQQAVENI  382 (399)
T ss_pred             CCEEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            899999987633  357999999854  36677777765

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-49  Score=344.66  Aligned_cols=352  Identities=59%  Similarity=0.926  Sum_probs=316.9

Q ss_pred             CCchhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHH
Q 014492           62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKD  141 (423)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~  141 (423)
                      +..++++|...+...++++..++.....+|+   +++.++.++++..|+|+-      +...+.||++...+++.++++-
T Consensus        11 ~~i~~l~Pyrcarddf~eg~lldane~a~G~---~iv~ld~~e~~ryPdP~q------~efk~~~~d~rnk~ls~a~~~d   81 (375)
T KOG0633|consen   11 MGISFLRPYRCARDDFQEGLLLDANEAALGR---DIVKLDANENPRYPDPEQ------MEFKYVYPDPRNKRLSDALAQD   81 (375)
T ss_pred             ccccccChhhhhhhhccccceecchhhhcCC---CceEeccccCCCCcCHHH------cccccccCCcccchhhhhcccC
Confidence            4567788888888888888888877777776   679999999999888864      3344678999889999999998


Q ss_pred             hCCCCCcEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-Cc
Q 014492          142 SGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KP  219 (423)
Q Consensus       142 ~g~~~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~  219 (423)
                      -++.+++|.++.|+.|.++.++++.|.|| ++|+...|+|.+|...+...+++++.+|.+.+|.+|.|++.+.++.. ++
T Consensus        82 kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~i  161 (375)
T KOG0633|consen   82 KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKI  161 (375)
T ss_pred             CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccc
Confidence            89999999999999999999999999999 89999999999999999999999999999999999999999998754 89


Q ss_pred             eEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492          220 KCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      |++++|+|+||||..+..+.+.+|.+.  +.+|++||+|.+|....+...++..++|++++.+|||+||++|+|+||-.+
T Consensus       162 K~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~  241 (375)
T KOG0633|consen  162 KCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAF  241 (375)
T ss_pred             eEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeecccc
Confidence            999999999999999999999999998  899999999999998888999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCCC
Q 014492          298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG  373 (423)
Q Consensus       298 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~~  373 (423)
                      +.++++.+++.+.+|++|.++..++.+++.+  .+.++..+..+.+.|.+|...|.+++++.  +.+..+||+.+++.++
T Consensus       242 ~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~  321 (375)
T KOG0633|consen  242 PLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGG  321 (375)
T ss_pred             cHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCC
Confidence            9999999999999999999999999999995  67899999999999999999999998876  6678899999999754


Q ss_pred             CC--HHHHHHHHH-hCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 MD--AKKLKDDLA-KMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~--~~~l~~~L~-~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+  ++.++..++ ++||.|+..+. .++.|++||++++++++..|.+.++..
T Consensus       322 ~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~EentvL~k~~K~~  374 (375)
T KOG0633|consen  322 DNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEENTVLMKCLKQF  374 (375)
T ss_pred             CcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccchHHHHHHHhh
Confidence            32  445555554 89999998766 678999999999999999999988864

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.8e-48  Score=372.11  Aligned_cols=312  Identities=30%  Similarity=0.475  Sum_probs=271.4

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHHhC---CCCCcEEEeCCHHHHHHHHHHHhc
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~~g---~~~~~i~~t~G~~~al~~~~~~l~  167 (423)
                      +.++++|+.|+|++++++.+.+++.+. .  ..+.||+++..+||++++++++   +++++|++|+|+++++..+++.+ 
T Consensus        18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~-   96 (335)
T PRK14808         18 KRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF-   96 (335)
T ss_pred             CCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh-
Confidence            467899999999999999999988762 2  1245887789999999999998   88999999999999999999977 


Q ss_pred             CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCC
Q 014492          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP  247 (423)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~  247 (423)
                         |.|++++|+|..|...++..|++++.+|.++++.++...    +  .++++++++|||||||.+++.+++++|++.+
T Consensus        97 ---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~~~~  167 (335)
T PRK14808         97 ---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V--GEGDVVFIPNPNNPTGHVFEREEIERILKTG  167 (335)
T ss_pred             ---CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c--cCCCEEEEeCCCCCCCCCcCHHHHHHHHhcC
Confidence               679999999999999999999999999987666655332    2  2568999999999999999999999999889


Q ss_pred             CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (423)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~  327 (423)
                      ++||+||+|.+|.. ......+...+++++++||||.||++|+|+||+++++++++.+.+.+.+++.+.++|.++..+++
T Consensus       168 ~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~  246 (335)
T PRK14808        168 AFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALD  246 (335)
T ss_pred             CEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHh
Confidence            99999999999863 23334445567999999999999999999999999999999998888788999999999999998


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  407 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~  407 (423)
                      +.++..+..+.++++++++.+.|++.+ +.+.+++|+|+|++++ +.+..++.+.|.++||.|+.+.     +++||+++
T Consensus       247 ~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g~f~~~~l~-~~~~~~~~~~l~~~Gi~V~~~~-----~~~Risi~  319 (335)
T PRK14808        247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFIFME-KEEKERLLEHLRAKNIAVRSFR-----EGVRITIG  319 (335)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCeEEEEeCC-CccHHHHHHHHHHCCeEEEECC-----CCeEEecC
Confidence            877788888888889999999999886 5667778999999997 4466889999999999999753     68999999


Q ss_pred             ChhhHHHHHHHHhhhC
Q 014492          408 KPEHTDALMECLMHLY  423 (423)
Q Consensus       408 ~~~~~~~l~~al~~l~  423 (423)
                      ..++++++.++|+.++
T Consensus       320 ~~~~~~~~~~~l~~~~  335 (335)
T PRK14808        320 KREENDMILKELEVFK  335 (335)
T ss_pred             CHHHHHHHHHHHHhhC
Confidence            9999999999998764

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=3.6e-48  Score=381.31  Aligned_cols=329  Identities=18%  Similarity=0.248  Sum_probs=270.8

Q ss_pred             CCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHH
Q 014492           91 GRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELI  159 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~-~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al  159 (423)
                      ...+.++++|+.|++++++++.+.+++.+. .  ....|++ .|.++||+++++++    |  ++++ +|++|+|+++++
T Consensus        26 ~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al  105 (388)
T PRK07366         26 RAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGT  105 (388)
T ss_pred             HhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHH
Confidence            344567899999999999999999888763 2  2256854 58899999999987    4  6787 699999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .++++.++++||.|++++|+|..|...++..|++++.+|.+.  ++.+|++++++.+. .++|++++|+||||||.+++.
T Consensus       106 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPTG~~~s~  184 (388)
T PRK07366        106 AHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-AQARLMVLSYPHNPTTAIAPL  184 (388)
T ss_pred             HHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-ccceEEEEeCCCCCCCccCCH
Confidence            999999999999999999999999999999999999999753  46789999988775 579999999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCc--h--hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLES--R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~--~--~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~  308 (423)
                      +++++|++.    +++||+||+|.+|.+++.  .  ....+ ..+++++++||||.||++|+|+||+++++++++++.+.
T Consensus       185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~  264 (388)
T PRK07366        185 SFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQV  264 (388)
T ss_pred             HHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHH
Confidence            999998764    899999999999976432  1  12222 23578999999999999999999999999999999887


Q ss_pred             cCCCCCc--HHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC--CCHHHHHHHH
Q 014492          309 KQPYNVS--VAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--MDAKKLKDDL  383 (423)
Q Consensus       309 ~~~~~~~--~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~--~~~~~l~~~L  383 (423)
                      ...++.+  ...+.++.+++. +.+|+++.++.++++++.+.+.|+++++....|++|+|+|+++++.  .++.++++.|
T Consensus       265 ~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l  344 (388)
T PRK07366        265 KAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQL  344 (388)
T ss_pred             HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHH
Confidence            7654432  333444455554 5789999999999999999999998864335688999999999854  3578888887


Q ss_pred             H-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          384 A-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      . ++||.++++..++  ..+|+||+++..  .+++.+++++|
T Consensus       345 ~~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl  384 (388)
T PRK07366        345 VAQTGVAASPGSGFGKSGEGYVRFALVHD--PDILEEAVERI  384 (388)
T ss_pred             HHhCCEEEeCchHhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            5 7899999987643  358999999864  47899998887

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.7e-48  Score=379.09  Aligned_cols=326  Identities=21%  Similarity=0.335  Sum_probs=273.9

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCcchHHHHHHHHHHh----C---CCCC-cEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDPESRRLRAALAKDS----G---LESD-HILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Y~~~g~~~lr~~ia~~~----g---~~~~-~i~~t~G~~~al~~  161 (423)
                      ++.++++|+.|++++++++.+.+++.+ +  ....+||+.|..+||+++++++    |   ++++ +|++|+|+++++..
T Consensus        42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~  121 (410)
T PRK06290         42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM  121 (410)
T ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence            456799999999999999988888765 2  1235688788999999999996    4   5576 79999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      ++++++++||.|+++.|+|+.|...++..|++++.+|.++  ++.+|++++++.+. .++|+|++++||||||.+++.++
T Consensus       122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~v~s~e~  200 (410)
T PRK06290        122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK-EKAKLLYLNYPNNPTGAVATKEF  200 (410)
T ss_pred             HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-ccceEEEEECCCCCCCcCCCHHH
Confidence            9999999999999999999999999999999999999753  57789999999886 58999999999999999999999


Q ss_pred             HHHHHcC----CCEEEEccCCccccCCCch--hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC
Q 014492          240 LLKILEM----PILVVLDEAYTEFSGLESR--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY  312 (423)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~  312 (423)
                      +++|++.    +++||+||+|.++.+++..  ..... ..+++|+++||||.||++|+|+||+++++++++.+.+....+
T Consensus       201 l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~  280 (410)
T PRK06290        201 YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN  280 (410)
T ss_pred             HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcc
Confidence            8888753    9999999999998754321  11122 246789999999999999999999999999999998877654


Q ss_pred             --CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC-------CCHHHHHHHH
Q 014492          313 --NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-------MDAKKLKDDL  383 (423)
Q Consensus       313 --~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~l~~~L  383 (423)
                        +.+.++|.++..+|++.+|.++.+++++++++.+.+.|++.++....|.+++|+|+++|++       .++.++++.|
T Consensus       281 ~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~L  360 (410)
T PRK06290        281 DSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYL  360 (410)
T ss_pred             ccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHH
Confidence              4456899999999998888999999999999999999998863323466788899999854       3688999999


Q ss_pred             HhC-CcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          384 AKM-GVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       384 ~~~-gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      .++ +|.+.+++.+  .+|+||+++    ++++++++.++|++
T Consensus       361 l~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~  401 (410)
T PRK06290        361 IKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKR  401 (410)
T ss_pred             HHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHH
Confidence            866 4566676543  479999998    78888999888875

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.7e-48  Score=370.96  Aligned_cols=311  Identities=40%  Similarity=0.648  Sum_probs=272.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd  171 (423)
                      .++++|+.|++++++++.+.+++.+ +.  ...+||+.|.+++|+++++++++++++|++|+|+++++..++..+  +||
T Consensus        18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd   95 (337)
T PRK03967         18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGK   95 (337)
T ss_pred             CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCC
Confidence            3679999999999999999888775 32  236788888999999999999999999999999999999988866  799


Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEE
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV  251 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li  251 (423)
                      +|+++.|+|..|...++..|++++.++.+.++.+|++.+++.+  .+++++++++||||||.+++.+++.++++.++++|
T Consensus        96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii  173 (337)
T PRK03967         96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVV  173 (337)
T ss_pred             eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEE
Confidence            9999999999999888999999999998777899999998875  47889999999999999999999999998899999


Q ss_pred             EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH
Q 014492          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY  331 (423)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~  331 (423)
                      +||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+....++.+.++|.++..+|++.++
T Consensus       174 ~De~y~~~~~~-~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~  252 (337)
T PRK03967        174 LDEAYAEFSGK-SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL  252 (337)
T ss_pred             EECchhhhccc-chHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH
Confidence            99999998642 33334445678999999999999999999999999999999999888889999999999999988778


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhh
Q 014492          332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH  411 (423)
Q Consensus       332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~  411 (423)
                      ..+.++.+.++++.+.+.|.+.    ..|++++|+|++++       +.+.|.++||.|+++.. ...+++||+++..++
T Consensus       253 ~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~~-------~~~~l~~~gi~v~~~~~-~~~~~~Ri~~~~~~~  320 (337)
T PRK03967        253 IEERIDYIIKERERVRRELGEY----AYPSDANFLLLKLD-------AYDYLLENGIVVRKLSG-RLEGHIRVTVGKREE  320 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHhccC----cCCCCCcEEEEhHH-------HHHHHHHCCEEEEeCCC-CCCCeEEEecCCHHH
Confidence            8777778888899999999765    24789999998773       67888899999998653 346799999999888


Q ss_pred             HHHHHHHHhhh
Q 014492          412 TDALMECLMHL  422 (423)
Q Consensus       412 ~~~l~~al~~l  422 (423)
                      +++|.++|+++
T Consensus       321 ~~~l~~~l~~~  331 (337)
T PRK03967        321 NDEFIKALKEI  331 (337)
T ss_pred             HHHHHHHHHHH
Confidence            99999999876

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=7.3e-48  Score=376.46  Aligned_cols=320  Identities=33%  Similarity=0.536  Sum_probs=276.1

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      ..++|+.|+|++++++.+.+++.+. .    ...+||+++..+||+++++++      ++++++|++|+|+++++.++++
T Consensus        27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~  106 (368)
T PRK03317         27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ  106 (368)
T ss_pred             ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence            4599999999999999999998763 1    236788888899999999998      5688999999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                      +++++||.|+++.|+|..|...++..|.+++.++.++++++|++++++++.+.+++++++++||||||.+++.+++++|+
T Consensus       107 ~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~  186 (368)
T PRK03317        107 AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAIL  186 (368)
T ss_pred             HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence            99999999999999999999999999999999997778899999999999766889999999999999999999999999


Q ss_pred             cC-CCEEEEccCCccccCCC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHH
Q 014492          245 EM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA  321 (423)
Q Consensus       245 ~~-~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a  321 (423)
                      +. ++++|+||+|.+|.+.+  ......+..+++++++||||.||++|+|+||+++++++++.+.....+++.++++|.+
T Consensus       187 ~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~s~~~~~a  266 (368)
T PRK03317        187 DAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAA  266 (368)
T ss_pred             HHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCCCCCCHHHHHH
Confidence            97 99999999999987543  2233334456899999999999999999999999999999998877788999999999


Q ss_pred             HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE-EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCC
Q 014492          322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF-ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKG  400 (423)
Q Consensus       322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~-~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~  400 (423)
                      +..+|++.+++.+.+++++++++.+.+.|++.+ +.+.++.++| +|.+++   ++.++.+.|.++||.+++++   .++
T Consensus       267 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~Gv~v~~~~---~~~  339 (368)
T PRK03317        267 ARAALRHADELLASVAALRAERDRVVAWLRELG-LRVAPSDANFVLFGRFA---DRHAVWQGLLDRGVLIRDVG---IPG  339 (368)
T ss_pred             HHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEeCCCCCcEEEEeccC---CHHHHHHHHHHCCEEEEeCC---CCC
Confidence            999998866666667778899999999998876 4444444444 554553   57889999999999999764   368


Q ss_pred             eEEEEecChhhHHHHHHHHhhh
Q 014492          401 YVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       401 ~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++||+++..++++++.++++++
T Consensus       340 ~iRi~~~~~~~~~~~~~~l~~~  361 (368)
T PRK03317        340 WLRVTIGTPEENDAFLAALAEV  361 (368)
T ss_pred             eEEEecCCHHHHHHHHHHHHHH
Confidence            9999999988889999998764

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=7.1e-48  Score=380.12  Aligned_cols=324  Identities=21%  Similarity=0.299  Sum_probs=274.0

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHh----C---CCCC-cEEEeCCHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDLI  162 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~----g---~~~~-~i~~t~G~~~al~~~  162 (423)
                      .+.++|+|+.|++++++++.+.+++.+ +.....|+++ |.++||+++++++    |   ++++ +|++|+|+++++..+
T Consensus        27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~  106 (396)
T PRK09147         27 ADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF  106 (396)
T ss_pred             cCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence            467889999999999999999999876 3334678765 7899999999986    6   5564 899999999999999


Q ss_pred             HHHhcCC---CCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          163 MRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       163 ~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      +++++++   ||.|+++.|+|..|...++..|++++.+|.+  ++|.+|++++++.+. .++|++++||||||||.+++.
T Consensus       107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~~~s~  185 (396)
T PRK09147        107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPL  185 (396)
T ss_pred             HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-hccEEEEEcCCCCCcCccCCH
Confidence            9999999   8999999999999999999999999999974  357899999998876 589999999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCc--hhhh------h--ccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLES--RMEW------V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~------~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      +++++|++.    +++||+||+|.++.+++.  ....      .  +..+++++++||||.|+++|+|+||+++++++++
T Consensus       186 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~  265 (396)
T PRK09147        186 DDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLK  265 (396)
T ss_pred             HHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHH
Confidence            999998864    999999999999875432  1111      1  1357999999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      .+.+...  .++++.+.|.++..++.+.+++.+.++.++++++.+.+.|++. .....|++|+|+|++++  .+..++++
T Consensus       266 ~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~--~~~~~~~~  342 (396)
T PRK09147        266 KFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVP--GDDTEFAR  342 (396)
T ss_pred             HHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECC--CCHHHHHH
Confidence            8887664  3678889999988888878889999999999999999999875 22246889999999997  46788888


Q ss_pred             HHH-hCCcEEEeCCCC--------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLA-KMGVMIRHYNNK--------ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~-~~gI~v~~~~~~--------~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|+ ++||.+.++..+        ...+++||+++..+  +++.+++++|
T Consensus       343 ~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~--~~l~~~l~rl  390 (396)
T PRK09147        343 RLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPL--AECVEAAERI  390 (396)
T ss_pred             HHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            886 789999988653        22579999999753  6788888886

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=1.5e-47  Score=368.65  Aligned_cols=305  Identities=23%  Similarity=0.339  Sum_probs=256.3

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~  175 (423)
                      ++++|+.|+|+++...          ...+||++...+||+++++++|+++++|++|+|+++++.+++. ++++|+ |++
T Consensus        17 ~~i~l~~Nenp~~~~~----------~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~   84 (332)
T PRK06425         17 RIIDFSANINDFMDIG----------DISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-III   84 (332)
T ss_pred             CEEEeccccCCCcChh----------hcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEE
Confidence            5799999999995221          2267999999999999999999999999999999999999997 567765 667


Q ss_pred             cCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEE
Q 014492          176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVV  251 (423)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li  251 (423)
                      ++|+|..|...++..|++++.+|.+. +..|.+.+++    .++|+|++||||||||.+++.+++++|++.    +++||
T Consensus        85 ~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI  159 (332)
T PRK06425         85 VEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF  159 (332)
T ss_pred             eCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence            79999999999999999999999754 4566655542    478999999999999999999999998764    89999


Q ss_pred             EccCCccccCCC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh
Q 014492          252 LDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP  329 (423)
Q Consensus       252 ~Deay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~  329 (423)
                      +||+|.+|.++.  +........+++++++||||.||+||+|+||+++++++++.+.+...+++.+.+++.++. .....
T Consensus       160 ~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~~~~~~~~~l~-~~~~~  238 (332)
T PRK06425        160 IDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFIR-SIDLD  238 (332)
T ss_pred             EecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCccCHHHHHHHH-HhhhH
Confidence            999999998643  233334456899999999999999999999999999999999988877877776654433 22334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEEe
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSV  406 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~iRis~  406 (423)
                      .++++.++.++++++++.+.|++++ +.+ .+++|+|+|++++   ++.++.+.|.++||.++++..++  +++|+||++
T Consensus       239 ~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~  314 (332)
T PRK06425        239 YVAKHSLDIMENERSYLINNLEAMG-FRAAGDPSANFITFMIP---DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAI  314 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCceEEEEEcC---CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe
Confidence            5677889999999999999999886 444 4678999999986   67899999999999999987642  357999999


Q ss_pred             cChhhHHHHHHHHhhh
Q 014492          407 GKPEHTDALMECLMHL  422 (423)
Q Consensus       407 ~~~~~~~~l~~al~~l  422 (423)
                      +..+++++|.++|+++
T Consensus       315 ~~~~~~~~l~~al~~~  330 (332)
T PRK06425        315 RRRSFNIKLVNALRNF  330 (332)
T ss_pred             CCHHHHHHHHHHHHHH
Confidence            9999999999999874

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=6.7e-48  Score=379.12  Aligned_cols=328  Identities=20%  Similarity=0.255  Sum_probs=278.2

Q ss_pred             CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+.++++|+.|++++++++.+.+++.+. . ....| +..|.+++|++++++++      +++++|++|+|+++++..+
T Consensus        29 ~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~  108 (387)
T PRK08960         29 AAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLA  108 (387)
T ss_pred             hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHH
Confidence            34567899999999999999999998763 2 22457 55688999999999973      6889999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      +..++++||+|++++|+|+.+...++..|++++.+|.+.  ++.+|++++++.++ .+++++++++||||||.+++.+++
T Consensus       109 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~  187 (387)
T PRK08960        109 SSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN-ADTVGALVASPANPTGTLLSRDEL  187 (387)
T ss_pred             HHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-ccceEEEEECCCCCCCcCcCHHHH
Confidence            999999999999999999999999999999999998643  46899999999886 678899999999999999999999


Q ss_pred             HHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCC
Q 014492          241 LKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV  314 (423)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~  314 (423)
                      ++|++.    |+++|+||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+....  ++.
T Consensus       188 ~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~  267 (387)
T PRK08960        188 AALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISA  267 (387)
T ss_pred             HHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCC
Confidence            998764    99999999999987654333333446789999999999999999999999999999998877654  467


Q ss_pred             cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcE
Q 014492          315 SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       315 ~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~  389 (423)
                      +.+.|.++..++.+  .+++++.++.++++++.+.+.|++++... ..|.+++|+|+++++ ..+..++++.|. ++||.
T Consensus       268 s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~  347 (387)
T PRK08960        268 STPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVA  347 (387)
T ss_pred             CHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEE
Confidence            89999999999975  37888999999999999999999886433 358889999999985 467888998876 78999


Q ss_pred             EEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.+|..+.   .++|+||+++.+  .+.|.+++++|
T Consensus       348 v~pg~~f~~~~~~~~iRi~~~~~--~~~l~~al~~l  381 (387)
T PRK08960        348 FTPGLDFGRHQAGQHVRFAYTQS--LPRLQEAVERI  381 (387)
T ss_pred             EcCchHhCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            99986643   357999999973  58899999886

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.5e-47  Score=372.14  Aligned_cols=326  Identities=24%  Similarity=0.364  Sum_probs=274.9

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhc-C-CCCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      .++++|+.|++++++++.+.+++.+ . .....|+++ |.++||+++++++      ++++++|++|+|+++++.+++.+
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~  108 (384)
T PRK06348         29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS  108 (384)
T ss_pred             CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence            4579999999999988888765443 2 233668665 7789999999987      46889999999999999999999


Q ss_pred             hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      ++++||.|+++.|+|..|...++..|++++.+|.  ++++.+|++++++.+. +++++|++++||||||.+++.+++++|
T Consensus       109 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l  187 (384)
T PRK06348        109 ILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEI  187 (384)
T ss_pred             hcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence            9999999999999999999999999999999985  3467799999999886 689999999999999999999999888


Q ss_pred             HcC----CCEEEEccCCccccCCCc--hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCC
Q 014492          244 LEM----PILVVLDEAYTEFSGLES--RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV  314 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~--~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~  314 (423)
                      ++.    +++||+||+|.++.++..  ...... ..+++++++||||.||++|+|+||+++++++++.+.....  .++.
T Consensus       188 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~  267 (384)
T PRK06348        188 AKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSA  267 (384)
T ss_pred             HHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCC
Confidence            764    999999999999876532  222222 2578999999999999999999999999999998887764  4778


Q ss_pred             cHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014492          315 SVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI  390 (423)
Q Consensus       315 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~v  390 (423)
                      +.+.|.++..++.+ ++++++.++.++++++.+.+.|++++++.+. |.+++|+|+++++ +.+..++++.|. ++||.+
T Consensus       268 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v  347 (384)
T PRK06348        268 PTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLV  347 (384)
T ss_pred             CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEE
Confidence            99999999999977 5678889999999999999999887655544 5677889999974 678899999886 689999


Q ss_pred             EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          391 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       391 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      .+|+.++  .++++||+++..  .+++.+++++|+
T Consensus       348 ~pg~~f~~~~~~~iRi~~~~~--~~~l~~al~~l~  380 (384)
T PRK06348        348 IPGKAFGESGEGYIRLACTVG--IEVLEEAFNRIE  380 (384)
T ss_pred             cCchhhccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            9987643  367999999853  478999998873

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=1.9e-47  Score=376.15  Aligned_cols=327  Identities=24%  Similarity=0.287  Sum_probs=272.8

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~  161 (423)
                      .+.++++|+.+.+++++++.+.+++.+. .  ...+| |..|..+||+++++++    |  ++++ +|++|+|+++++..
T Consensus        30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~  109 (389)
T PRK08068         30 EGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE  109 (389)
T ss_pred             cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence            3457899999988888788888887652 2  22578 4568999999999997    5  5777 89999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      ++..++++||.|++++|+|..|...++..|++++.+|.++  ++.+|++++++.+. .++++|++|+||||||.+++.++
T Consensus       110 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPTG~~~s~~~  188 (389)
T PRK08068        110 LPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMYLNYPNNPTGAVATKAF  188 (389)
T ss_pred             HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCCcCCHHH
Confidence            9999999999999999999999999999999999999753  57789999999886 58999999999999999999999


Q ss_pred             HHHHHcC----CCEEEEccCCccccCCC-ch---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          240 LLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      +++|++.    +++||+||+|.++.+++ ..   ....+..+++++++||||.||++|+|+||+++++++++.+.+....
T Consensus       189 ~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~  268 (389)
T PRK08068        189 FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH  268 (389)
T ss_pred             HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh
Confidence            9887764    99999999999887643 21   1222235688999999999999999999999999999999887766


Q ss_pred             CC--CcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014492          312 YN--VSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG  387 (423)
Q Consensus       312 ~~--~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~g  387 (423)
                      +.  .+++.|.++..++. +.+++++.+++++++++.+.+.|+++++....|.+++|+|++++++.++.++.+.|+ ++|
T Consensus       269 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~g  348 (389)
T PRK08068        269 LFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGWEVDAPKGSFFAWMPVPKGYTSEQFADLLLEKAH  348 (389)
T ss_pred             ccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCCCCCHHHHHHHHHHhCC
Confidence            43  44556777777775 467889999999999999999999886433345677889999987778999999998 479


Q ss_pred             cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.|+++..++  .++++||+++..+  +++.+++++|
T Consensus       349 i~v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l  383 (389)
T PRK08068        349 VAVAPGNGFGEHGEGYVRVGLLTDE--ERLREAVERI  383 (389)
T ss_pred             EEEecchHhCccCCCeEEEEEcCCH--HHHHHHHHHH
Confidence            9999987533  3679999998643  7899999886

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=4.3e-47  Score=373.34  Aligned_cols=334  Identities=23%  Similarity=0.342  Sum_probs=277.4

Q ss_pred             HHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCC
Q 014492           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCG  154 (423)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G  154 (423)
                      .+++....+.++++|+.|++++++++.+.+++.+. .  ....|+++ |.++||+++++++    |  ++++ +|++|+|
T Consensus        22 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G  101 (385)
T PRK09276         22 KKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIG  101 (385)
T ss_pred             HHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence            34444445667899999999999999998888763 2  23578765 7899999999997    4  4565 5999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      +++++..+++.++++||+|++++|+|+.|...++..|++++.+|.++  ++.+|++++++.+. .++++|+++|||||||
T Consensus       102 ~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG  180 (385)
T PRK09276        102 SKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-KKAKLMFINYPNNPTG  180 (385)
T ss_pred             cHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999999999643  57789999999886 6899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (423)
Q Consensus       233 ~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~  304 (423)
                      .+++.+++++|++.    +++||+||+|.++.+++.   .....+. .+++++++||||.||++|+|+||+++++++++.
T Consensus       181 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~  260 (385)
T PRK09276        181 AVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAG  260 (385)
T ss_pred             CCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHH
Confidence            99999988888764    899999999999876432   1112222 467899999999999999999999999999999


Q ss_pred             HHHhcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHH
Q 014492          305 LWRAKQP--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLK  380 (423)
Q Consensus       305 l~~~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~  380 (423)
                      +.+....  .+.+.+.|.++..++.+ ..|+++.+++++++++++.+.|++++ +.+ .|.+++|+|++++++.+..++.
T Consensus       261 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~  339 (385)
T PRK09276        261 LGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-LEVEPPKATFYVWAPVPKGYTSAEFA  339 (385)
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcceEEEEECCCCCCHHHHH
Confidence            8876653  34677889999999975 67889999999999999999999885 443 4567788999998778899999


Q ss_pred             HHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          381 DDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       381 ~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      ++|. ++||.++++..+.  .++++||+++.++  +++.+++++|+
T Consensus       340 ~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~  383 (385)
T PRK09276        340 TLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPD--ERIEEAVERIK  383 (385)
T ss_pred             HHHHHhCCEEECCchhhCCCCCCeEEEEeCCCH--HHHHHHHHHHh
Confidence            9887 6899999986632  3579999998643  78999998873

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=3.7e-47  Score=366.38  Aligned_cols=317  Identities=22%  Similarity=0.264  Sum_probs=264.3

Q ss_pred             CCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHH
Q 014492           79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADE  157 (423)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~  157 (423)
                      .+.....++..+|.++.++++|+.|+|++++++....+    ....+||++. .+||+++++++|+. +++|++|+|+++
T Consensus         8 hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~~----~~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e   82 (339)
T PRK06959          8 HGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA----DAWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQA   82 (339)
T ss_pred             CCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCCH----HHHHhCCCch-HHHHHHHHHHhCCCCcccEEECcCHHH
Confidence            44556666777787667889999999999887322111    1125699876 89999999999996 589999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      ++..+.. ++++|+ |+++.|+|..|...++..|++++.++.++      +.    +. .+++++++||||||||.+++.
T Consensus        83 ~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~----~~-~~~~~v~l~nPnNPTG~~~s~  149 (339)
T PRK06959         83 AIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DT----LP-AALTHLIVVNPNNPTAERLPA  149 (339)
T ss_pred             HHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------hh----cc-ccCCEEEEeCCCCCCCCCCCH
Confidence            9997765 678877 88899999999999999999999998643      22    22 356789999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~  313 (423)
                      +++++|++.    +.++|+||+|.+|....+... ....+++++++||||.||++|+|+||+++++++++.+.+...+|+
T Consensus       150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~-~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~~  228 (339)
T PRK06959        150 ARLLRWHAQLAARGGTLIVDEAFADTLPAASLAA-HTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAWT  228 (339)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCccCCCcccchh-ccCCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCCC
Confidence            999998752    889999999999875433222 224578999999999999999999999999999999999988899


Q ss_pred             CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014492          314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY  393 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~  393 (423)
                      ++.++|.++.++|++.+|.++.+++++++++++.+.|++++ +.+. +.++|+|++++   +..++.+.|.++||.|+.+
T Consensus       229 vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~-~~~~f~~~~~~---~~~~l~~~l~~~GI~vr~~  303 (339)
T PRK06959        229 VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG-FAVH-ATPLFSWTDDP---RAAALHAALARRGIWTRYF  303 (339)
T ss_pred             CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcc-CcceEEEEeCC---CHHHHHHHHHhCCeEEEEC
Confidence            99999999999999989999999999999999999999986 3433 46799999885   5788999999999999976


Q ss_pred             CCCCCCCeEEEEe-cChhhHHHHHHHHhhh
Q 014492          394 NNKELKGYVRVSV-GKPEHTDALMECLMHL  422 (423)
Q Consensus       394 ~~~~~~~~iRis~-~~~~~~~~l~~al~~l  422 (423)
                      +   ..+|+||++ ++.+++++|.++|+++
T Consensus       304 ~---~~~~lRisi~~~~~e~~~l~~al~~~  330 (339)
T PRK06959        304 A---PPPSVRFGLPADEAEWQRLEDALAEC  330 (339)
T ss_pred             C---CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence            4   356999999 5778889999998764

>PLN02187 rooty/superroot1

Probab=100.00  E-value=5.5e-47  Score=378.47  Aligned_cols=327  Identities=21%  Similarity=0.317  Sum_probs=269.5

Q ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a  158 (423)
                      +..++|+|+.|+++    +.+++++.+++.+. .  ....| |..|.+++|+++|+++      ++++++|++|+|++++
T Consensus        64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a  143 (462)
T PLN02187         64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG  143 (462)
T ss_pred             CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence            45789999999887    55667888877662 2  23568 6668999999999997      3689999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      +.+++.++++|||.|+++.|+|+.|...++..|++++.+++  +++|++|++++++.+. .++++++++|||||||.+++
T Consensus       144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~-~~~~~v~i~nP~NPTG~v~s  222 (462)
T PLN02187        144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD-ENTVAMVVINPNNPCGNVYS  222 (462)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC-CCcEEEEEeCCCCCCCCccC
Confidence            99999999999999999999999999999999999999986  3578999999999886 68899999999999999999


Q ss_pred             HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-H-H---HHHH
Q 014492          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-S---IIEY  304 (423)
Q Consensus       237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~-~---~~~~  304 (423)
                      .+++++|++.    +++||+||+|.++.+++.   ....+....++++++||||.|++||+|+||++++ + .   +++.
T Consensus       223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~  302 (462)
T PLN02187        223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKV  302 (462)
T ss_pred             HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHH
Confidence            9999888764    999999999999876432   2223333357999999999999999999999983 3 2   3345


Q ss_pred             HHHhcCCCC----CcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCC----
Q 014492          305 LWRAKQPYN----VSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----  372 (423)
Q Consensus       305 l~~~~~~~~----~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~----  372 (423)
                      +...+..++    ++.+.|.++.++|++  .+|+++.++.++++++.+.+.|+++++..  ..|++++|+|++++.    
T Consensus       303 ~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~  382 (462)
T PLN02187        303 LQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMD  382 (462)
T ss_pred             HHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCC
Confidence            655555443    478999999999974  57899999999999999999999987543  257889999998752    


Q ss_pred             CC-CHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 GM-DAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 ~~-~~~~l~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +. +..+++..+ .++||.+.+|..++.++|+||+++..+  +.|.+++++|
T Consensus       383 ~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~--e~l~~al~rL  432 (462)
T PLN02187        383 NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEA--HMLEDALERL  432 (462)
T ss_pred             CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence            22 465776665 589999999987777899999999764  7788888876

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.3e-47  Score=373.18  Aligned_cols=326  Identities=16%  Similarity=0.260  Sum_probs=272.9

Q ss_pred             CCCeeEcCCCCCC-CCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHh----C--CCC-CcEEEeCCHHHHHHH
Q 014492           94 PEDIVKIDANENP-YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LES-DHILVGCGADELIDL  161 (423)
Q Consensus        94 ~~~~i~l~~~~~~-~~~~~~v~~al~~-~~--~~~~Y~~-~g~~~lr~~ia~~~----g--~~~-~~i~~t~G~~~al~~  161 (423)
                      +.+.++|+.+.++ +++++.+.+++.+ +.  ...+|++ .|.++||+++++++    |  +++ ++|++|+|+++++..
T Consensus        38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~  117 (405)
T PRK06207         38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL  117 (405)
T ss_pred             CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence            4577999988766 5677888777765 22  1256865 47899999999886    6  466 899999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-----CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++.+++++||+|++++|+|+.+...++..|++++.++.+     +++++|++++++.+. .++++|++||||||||.+++
T Consensus       118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s  196 (405)
T PRK06207        118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK-AGVRVFLFSNPNNPAGVVYS  196 (405)
T ss_pred             HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh-hcCeEEEECCCCCCCCcCCC
Confidence            999999999999999999999999999999999999864     368899999999986 57999999999999999999


Q ss_pred             HHHHHHHHcC----CCEEEEccCCccccCCCch---hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492          237 DEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (423)
Q Consensus       237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~  308 (423)
                      .+++++|++.    +++||+||+|.++.+++..   ...+ ...+++++++||||.|+++|+|+||+++++++++++.+.
T Consensus       197 ~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~  276 (405)
T PRK06207        197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL  276 (405)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence            9998888764    9999999999998764321   1111 236899999999999999999999999999999999877


Q ss_pred             cCC--CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHH
Q 014492          309 KQP--YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDL  383 (423)
Q Consensus       309 ~~~--~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L  383 (423)
                      ...  .+.+.+.|.++..+|++. .|+++..++++++++.+.+.|++++++.+ .|++|+|+|+++++ ..++.++.+.|
T Consensus       277 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l  356 (405)
T PRK06207        277 QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKIL  356 (405)
T ss_pred             HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHH
Confidence            654  456778999999999764 67888888899999999999988755554 46789999999985 46788999999


Q ss_pred             H-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          384 A-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      . ++||.+.+|..+  ..++++||+++..  .++|.+++++|
T Consensus       357 ~~~~gV~v~pG~~F~~~~~~~~Ris~~~~--~~~l~~al~rl  396 (405)
T PRK06207        357 RLQAGVIVTPGTEFSPHTADSIRLNFSQD--HAAAVAAAERI  396 (405)
T ss_pred             HHhcCEEEeCchHhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            7 789999998763  3468999999974  37899998886

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=2.4e-46  Score=369.96  Aligned_cols=325  Identities=22%  Similarity=0.351  Sum_probs=274.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.|.+++++++.+.+++.+. .. ...|+++ |.++||+++++++    |  ++++ +|++|+|+++++..++.
T Consensus        54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~  133 (413)
T PLN00175         54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATIL  133 (413)
T ss_pred             CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHH
Confidence            46899999999999888888888763 22 2578654 7999999999987    3  4676 79999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.+. .++|+|++++||||||.+++.+++++|
T Consensus       134 ~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~-~~~k~i~i~~p~NPtG~~~s~~~l~~l  212 (413)
T PLN00175        134 GLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT-SKTRAILINTPHNPTGKMFTREELELI  212 (413)
T ss_pred             HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC-cCceEEEecCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999975 458899999999986 589999999999999999999998888


Q ss_pred             HcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCC
Q 014492          244 LEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV  314 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~  314 (423)
                      ++.    +++||+||+|.++.+++..  ...+ ...+++|+++||||.|+++|+|+||+++++++++.+.....  .++.
T Consensus       213 ~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~  292 (413)
T PLN00175        213 ASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFAT  292 (413)
T ss_pred             HHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCC
Confidence            764    9999999999998764422  2222 23578999999999999999999999999999998887764  4788


Q ss_pred             cHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CC-CHHHHHHHHH-hCCcEE
Q 014492          315 SVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GM-DAKKLKDDLA-KMGVMI  390 (423)
Q Consensus       315 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~-~~~~l~~~L~-~~gI~v  390 (423)
                      +.+.|.++..+|++ ..|+++.++.++++++.+.+.|++.+.....|.+++|+|++++. +. +..++++.|. ++||.+
T Consensus       293 s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v  372 (413)
T PLN00175        293 ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAA  372 (413)
T ss_pred             CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEE
Confidence            99999999999987 47889999999999999999999875332346778899999842 43 5788999887 679999


Q ss_pred             EeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          391 RHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       391 ~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|+..+     ...+++||+++..  .++|.+++++|
T Consensus       373 ~pg~~F~~~~~~~~~~iRls~~~~--~e~l~~~~~rL  407 (413)
T PLN00175        373 IPPSVFYLNPEDGKNLVRFAFCKD--EETLRAAVERM  407 (413)
T ss_pred             eCchHhCCCCCCCCCEEEEEEcCC--HHHHHHHHHHH
Confidence            988653     2357999999964  47899999887

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=6.9e-47  Score=372.71  Aligned_cols=324  Identities=22%  Similarity=0.334  Sum_probs=272.9

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHh--------CCCCC-cEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS--------GLESD-HILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~--------g~~~~-~i~~t~G~~~al~~  161 (423)
                      .+.++++|+.|++++++++.+.+++.+ ......|+++ |.++||+++++++        |++++ +|++|+|+++++..
T Consensus        26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~  105 (393)
T TIGR03538        26 ASKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA  105 (393)
T ss_pred             cCCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence            356789999999999999999999886 3334678665 7899999999997        46674 89999999999999


Q ss_pred             HHHHhcCCCCe--EEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          162 IMRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       162 ~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      +++++++|||.  |+++.|+|..|...++..|++++.+|.+  +++.+|++++++.+. .++|+|+++|||||||.+++.
T Consensus       106 ~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPtG~~~s~  184 (393)
T TIGR03538       106 FAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCSPGNPTGAVLSL  184 (393)
T ss_pred             HHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh-hcceEEEEeCCCCCcCcccCH
Confidence            99999999986  9999999999999999999999999974  357889999999886 589999999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCC--ch---hhh---h--ccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLE--SR---MEW---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~--~~---~~~---~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      +++++|++.    +++||+||+|.++.+.+  ..   ...   .  ...+++++++||||.|+++|+|+||+++++++++
T Consensus       185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~  264 (393)
T TIGR03538       185 DTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK  264 (393)
T ss_pred             HHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence            999888764    99999999999887542  11   111   1  1357899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      ++.+...  .++++.+.|.++...+.+.+++++.++.++++++.+.+.|++. .....|++|+|+|++++  .+..++.+
T Consensus       265 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~--~~~~~~~~  341 (393)
T TIGR03538       265 AFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVP--GDDEAFAR  341 (393)
T ss_pred             HHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECC--CCHHHHHH
Confidence            8887765  3567889999988888878889999999999999999999875 12246889999999997  46788998


Q ss_pred             HHH-hCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLA-KMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~-~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|. ++||.+.+++.+.        ..+++||+++..  .+++.+++++|
T Consensus       342 ~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~--~~~l~~~l~~l  389 (393)
T TIGR03538       342 ALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAP--LEECVEAAERI  389 (393)
T ss_pred             HHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            886 6899999887532        357999999864  37788888876

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=1.1e-46  Score=372.34  Aligned_cols=327  Identities=19%  Similarity=0.229  Sum_probs=271.3

Q ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHHHhc-CCC--CCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LKF--PYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~~--~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a  158 (423)
                      .+.++|+|+.|+++    +++++.+.+++.+ +..  ..+| |..|..+||+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a  109 (409)
T PLN00143         30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA  109 (409)
T ss_pred             CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence            35689999999998    8999999888876 222  2568 6678999999999997      4688999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      +.+++.+++++||.|+++.|+|+.|...++..|++++.++.+  +++.+|++++++++. .++++++++|||||||.+++
T Consensus       110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~~~~~nP~NPTG~~~s  188 (409)
T PLN00143        110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-ENTIAMVIINPGNPCGSVYS  188 (409)
T ss_pred             HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc-cCCEEEEEECCCCCCCCccC
Confidence            999999999999999999999999999999999999999863  567899999999886 67899999999999999999


Q ss_pred             HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-H-HH------
Q 014492          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-SI------  301 (423)
Q Consensus       237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~-~~------  301 (423)
                      .+++++|++.    +++||+||+|.++.+++.   ....+...+++++++||||.|+++|+|+||++++ + .+      
T Consensus       189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~  268 (409)
T PLN00143        189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI  268 (409)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence            9999988764    999999999999886432   2233445578999999999999999999999983 3 33      


Q ss_pred             HHHHHHhcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCC----
Q 014492          302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----  372 (423)
Q Consensus       302 ~~~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~----  372 (423)
                      ++.+.+.... ...+.+.|.++..+|++  .+|+++.+++++++++.+.+.|++++...  ..|.+|+|+|+++++    
T Consensus       269 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~  348 (409)
T PLN00143        269 ADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLE  348 (409)
T ss_pred             HHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcC
Confidence            3444444332 23478899999999975  57899999999999999999998876543  247789999999973    


Q ss_pred             C-CCHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 G-MDAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 ~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      + .+..+++..+ .++||.+.+|..++.++|+||+++..  .+++.+++++|
T Consensus       349 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~--~~~l~~al~rl  398 (409)
T PLN00143        349 DIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVE--QSSLEDGLGRL  398 (409)
T ss_pred             CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence            2 2566777655 58999999998777789999999965  37899999887

>PRK07324 transaminase; Validated

Probab=100.00  E-value=6.3e-47  Score=369.83  Aligned_cols=331  Identities=22%  Similarity=0.238  Sum_probs=279.5

Q ss_pred             HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHhC-CCCCcEEEeCCHHHHHHHHHH
Q 014492           89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDSG-LESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y~~-~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +++..+.++++|+.+++++.+++.+ +++.+ +. ....|+. .|.++||++++++++ +++++|++|+|+++++.+++.
T Consensus        20 ~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~   98 (373)
T PRK07324         20 TYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLY   98 (373)
T ss_pred             ccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHH
Confidence            3455677899999999998887777 55543 22 2356744 589999999999984 788999999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      +++++||+|+++.|+|..+...++..|++++.+|.+  +++.+|++++++.+. .++|+|++++||||||.+++.+++++
T Consensus        99 ~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~~  177 (373)
T PRK07324         99 ALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLEE  177 (373)
T ss_pred             HhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999965  356789999999886 68999999999999999999877777


Q ss_pred             HHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcH
Q 014492          243 ILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSV  316 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~  316 (423)
                      |++.    |+++|+||+|.++.+++.........+++|+++||||.||++|+|+||+++++++++++.+.+..  ++.+.
T Consensus       178 i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~  257 (373)
T PRK07324        178 IVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAGV  257 (373)
T ss_pred             HHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCCh
Confidence            7653    99999999999987654333333346788999999999999999999999999999999988764  56788


Q ss_pred             HHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeC
Q 014492          317 AAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHY  393 (423)
Q Consensus       317 ~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~  393 (423)
                      +.|.++..+|++ ..++++.++.++++++.+.+.|++.+++. +.|.+|+|.|+.++.+.+..+++++|. ++||.+.||
T Consensus       258 ~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg  337 (373)
T PRK07324        258 FDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPG  337 (373)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECc
Confidence            899999999987 45788889999999999999998876554 567888898988876678899999976 789999999


Q ss_pred             CCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          394 NNKELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       394 ~~~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      +.++.++++||+++..  .+.|.+++++|+
T Consensus       338 ~~F~~~~~iRis~~~~--~~~l~~~l~rl~  365 (373)
T PRK07324        338 NRFDLEGHVRIGYCCD--TETLKKGLKKLS  365 (373)
T ss_pred             cccCCCCeEEEEecCC--HHHHHHHHHHHH
Confidence            8877789999999975  478999998873

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=2.7e-46  Score=362.61  Aligned_cols=322  Identities=43%  Similarity=0.737  Sum_probs=283.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      .++|+|+.|+++++++|.+++++.+. .....|+++..+++|+++++++++++++|++|+|+++++..++..++++||+|
T Consensus        19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v   98 (346)
T TIGR01141        19 KEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAV   98 (346)
T ss_pred             CceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEE
Confidence            57999999999999999999999874 23367887767899999999999989999999999999999999999999999


Q ss_pred             EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEE
Q 014492          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV  250 (423)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~l  250 (423)
                      ++++|+|+.+...++..|++++.++.++++.+|++++++.+. +++++|++++|+||||.+++.+++.++++.   ++++
T Consensus        99 ~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~i  177 (346)
T TIGR01141        99 LVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALV  177 (346)
T ss_pred             EEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEE
Confidence            999999999988889999999999987777899999999875 689999999999999999999999999986   8999


Q ss_pred             EEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH
Q 014492          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI  330 (423)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~  330 (423)
                      |+||+|.++.............+++++++|+||.||++|+|+||+++++++++++......++.+.++|.++..++++.+
T Consensus       178 i~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  257 (346)
T TIGR01141       178 VVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFNLSRLAQAAAIAALRDDD  257 (346)
T ss_pred             EEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCCCCHHHHHHHHHHhCCHH
Confidence            99999998775433333444456889999999999999999999999999999998887788899999999999998877


Q ss_pred             HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecCh
Q 014492          331 YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKP  409 (423)
Q Consensus       331 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~  409 (423)
                      +.++.+++++++++++.+.|++++++.+.|..++|+|++++.  +++++.+.|.++||.+.++..+ ..++++||+++++
T Consensus       258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~~~  335 (346)
T TIGR01141       258 FIEKTVEEINAERERLYDGLKKLPGLEVYPSDANFVLIRFPR--DADALFEALLEKGIIVRDLNSYPGLPNCLRITVGTR  335 (346)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCCEEEEecCC--CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecCCH
Confidence            888999999999999999999886566778889999999974  7889999999999999998753 2378999999987


Q ss_pred             hhHHHHHHHH
Q 014492          410 EHTDALMECL  419 (423)
Q Consensus       410 ~~~~~l~~al  419 (423)
                      ++.+++.++|
T Consensus       336 ~~i~~~~~~l  345 (346)
T TIGR01141       336 EENDRFLAAL  345 (346)
T ss_pred             HHHHHHHHHh
Confidence            7766666655

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=1.9e-46  Score=364.51  Aligned_cols=320  Identities=34%  Similarity=0.578  Sum_probs=277.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      .++|+|+.|++++++++.+.+++.+. .....||+.|.+++|+++++++++++++|++|+|+++++..++..++++||.|
T Consensus        22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V  101 (352)
T PRK03321         22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV  101 (352)
T ss_pred             ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence            35799999999999999999998763 23356888899999999999999999999999999999999999999999999


Q ss_pred             EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEE
Q 014492          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV  250 (423)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~l  250 (423)
                      +++.|+|..|...++..|++++.+|.++++++|++++++.++ .+++++++++||||||.+++.+++.++++.   ++++
T Consensus       102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~i  180 (352)
T PRK03321        102 IFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLV  180 (352)
T ss_pred             EeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEE
Confidence            999999999988889999999999987567899999999996 589999999999999999999999999985   8999


Q ss_pred             EEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492          251 VLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (423)
Q Consensus       251 i~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~  327 (423)
                      |+||+|.+|.+++.   ........+++++++||||.||++|+|+||+++++++++.+.+....++.+.++|.++.++|.
T Consensus       181 i~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~  260 (352)
T PRK03321        181 VLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLA  260 (352)
T ss_pred             EEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhc
Confidence            99999999876442   223344567999999999999999999999999999999999887778999999999999997


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  407 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~  407 (423)
                      ..+.+.+..+.+.++++++.+.|++.++ .+.+++|+|+|++++  .+..++.+.|.++||.+++++    .++|||+++
T Consensus       261 ~~~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~~g~~i~i~l~--~~~~~~~~~l~~~gI~v~~~~----~~~iRi~~~  333 (352)
T PRK03321        261 AEDELLERVDAVVAERDRVRAALRAAGW-TVPPSQANFVWLPLG--ERTADFAAAAAEAGVVVRPFA----GEGVRVTIG  333 (352)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCCCEEEEeCC--CCHHHHHHHHHHCCEEEEccC----CCcEEEeeC
Confidence            7555555556666778889999988764 445667899999985  367889999999999999853    357999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014492          408 KPEHTDALMECLMHL  422 (423)
Q Consensus       408 ~~~~~~~l~~al~~l  422 (423)
                      ..++++++.++++++
T Consensus       334 ~~~~~~~~~~al~~~  348 (352)
T PRK03321        334 APEENDAFLRAARAW  348 (352)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999875

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=4e-46  Score=378.43  Aligned_cols=351  Identities=21%  Similarity=0.281  Sum_probs=271.6

Q ss_pred             HHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHH
Q 014492           67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKD  141 (423)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~  141 (423)
                      .++++..+.++ ....+...+++....+.++|+|+.|++   ++++++++.+++.+ +....+|++. |..+||++|+++
T Consensus       119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~  197 (517)
T PRK13355        119 KSHKLDNVLYD-VRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQY  197 (517)
T ss_pred             hhHHhhccCcc-HHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHH
Confidence            45555555543 222233445555556678999999765   46668888888865 3344679765 799999999999


Q ss_pred             h------CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHH
Q 014492          142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA  213 (423)
Q Consensus       142 ~------g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~  213 (423)
                      +      ++++++|++|+|+++++.+++.+++++||+|+++.|+|+.|...++..|++++.++.+  ++|.+|++++++.
T Consensus       198 ~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~  277 (517)
T PRK13355        198 AQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK  277 (517)
T ss_pred             HHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence            8      6789999999999999999999999999999999999999999999999999999864  3588999999999


Q ss_pred             hhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhc
Q 014492          214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       214 i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      +. .++|+|+++|||||||.+++.+++++|++.    +++||+||+|.+|.+++.   ....+.....+++++||||.|+
T Consensus       278 ~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~  356 (517)
T PRK13355        278 IT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM  356 (517)
T ss_pred             cC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc
Confidence            86 689999999999999999999888888764    899999999999886542   1222222234677899999999


Q ss_pred             ccCcccccccc--CHH----HHHHHHHhcCC-CCCcHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          287 LAGLRVGYGAF--PLS----IIEYLWRAKQP-YNVSVAAEVAACAALQNP----IYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       287 ~~G~R~G~i~~--~~~----~~~~l~~~~~~-~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      ++|+|+||+++  +++    +++.+...... ++.+.++|.++..+|...    +++.+. +++.++++++.+.|+++++
T Consensus       357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~g  435 (517)
T PRK13355        357 IAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAIPG  435 (517)
T ss_pred             CcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCC
Confidence            99999999995  344    34444433332 678899999999999752    455554 3445678999999998865


Q ss_pred             Cee-cCCCceEEEEEeCCC----CCHHHHHHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          356 LNP-YPSYSNFILCEVTSG----MDAKKLKDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       356 ~~~-~p~~~~~~~~~~~~~----~~~~~l~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.+ .|.+++|+|++++.+    .+..+++.. |.++||.|.+|..++  .++|+||+++..  .+.|.+++++|
T Consensus       436 ~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~--~~~l~~a~~rl  508 (517)
T PRK13355        436 ISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPR--LEDLEDAMDRL  508 (517)
T ss_pred             cccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCC--HHHHHHHHHHH
Confidence            554 567778889888642    245566554 558999999988753  578999999754  47899999887

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=2.9e-46  Score=367.18  Aligned_cols=328  Identities=23%  Similarity=0.353  Sum_probs=274.5

Q ss_pred             CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh----CC--CCC-cEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----GL--ESD-HILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~----g~--~~~-~i~~t~G~~~al~  160 (423)
                      ..+.++++|+.|++++++++.+.+++.+. .  ...+|+++ |.++||+++++++    |+  +++ +|++|+|+++++.
T Consensus        26 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~  105 (383)
T TIGR03540        26 AEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIA  105 (383)
T ss_pred             hcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHH
Confidence            34567899999999999899888887762 2  23678765 7899999999986    33  455 6999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      .+++.++++||.|+++.|+|+.|...++..|++++.+|.+  +++.+|++++++.+. .++++|++||||||||.+++.+
T Consensus       106 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~i~~P~NPtG~~~~~~  184 (383)
T TIGR03540       106 HIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLK  184 (383)
T ss_pred             HHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-ccceEEEEeCCCCCcCccCCHH
Confidence            9999999999999999999999999999999999999974  356789999999886 6899999999999999999998


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCc-hh--hhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLES-RM--EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~-~~--~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~  310 (423)
                      ++++|++.    +++||+||+|.++.+.+. ..  ..+. ..+++++++||||.||++|+|+||+++++++++++.....
T Consensus       185 ~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~  264 (383)
T TIGR03540       185 FFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKT  264 (383)
T ss_pred             HHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHH
Confidence            88888764    899999999998876431 11  1222 2467899999999999999999999999999998887665


Q ss_pred             C--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014492          311 P--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-K  385 (423)
Q Consensus       311 ~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~  385 (423)
                      .  .+.+.+.|.++..++++ .+|+++.++.++++++.+.+.|++.+ +.+ .|.+++|+|++++++.++.++++.|. +
T Consensus       265 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~  343 (383)
T TIGR03540       265 NVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKATFYVWVPVPEGYTSAEFAARLLEE  343 (383)
T ss_pred             hcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCcceEEEEECCCCCCHHHHHHHHHHH
Confidence            3  46677889999999987 58889999999999999999999885 443 45678889999987788899999876 7


Q ss_pred             CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       386 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      +||.++++..+.  .++++||+++.++  +++.+++++|+
T Consensus       344 ~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l~  381 (383)
T TIGR03540       344 TGVVVTPGVGFGEYGEGYIRISLTVPD--ERLEEAVARIK  381 (383)
T ss_pred             CCEEEecchhhCccCCCeEEEEecCCH--HHHHHHHHHHh
Confidence            899999987643  3579999998653  78999998873

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.1e-46  Score=368.03  Aligned_cols=331  Identities=24%  Similarity=0.311  Sum_probs=271.5

Q ss_pred             HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHH
Q 014492           89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADE  157 (423)
Q Consensus        89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~  157 (423)
                      +....+.++++|+.+.++.++++++.+++.+ +.  ....|+++ |.++||+++++++    |  ++++ +|++|+|+++
T Consensus        29 ~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~  108 (394)
T PRK05942         29 RAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE  108 (394)
T ss_pred             HHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence            3334456789999987777666666665543 22  22678765 7899999999987    4  4677 5899999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++..++.+++++||+|++++|+|+.+...++..|++++.+|.+  ++|.+|++++++.+. +++|+|+++|||||||.++
T Consensus       109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~P~NPtG~~~  187 (394)
T PRK05942        109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-QQAKILYFNYPSNPTTATA  187 (394)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-ccceEEEEcCCCCCCCCcC
Confidence            9999999999999999999999999988888899999999975  356799999999886 6899999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~  307 (423)
                      +.+++++|++.    +++||+||+|.++.+++.   ....+.. .+++++++||||.||++|+|+||+++++++++.+..
T Consensus       188 s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~  267 (394)
T PRK05942        188 PREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRT  267 (394)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHH
Confidence            99988887664    999999999998876432   2222222 356789999999999999999999999999999987


Q ss_pred             hcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH
Q 014492          308 AKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       308 ~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      ...  .++.+.++|.++..+|+. .+++++.+++++++++.+.+.|++.+.....|.+++|+|++++.+.++.++...+.
T Consensus       268 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l  347 (394)
T PRK05942        268 LKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMGSTDFALNVL  347 (394)
T ss_pred             HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeeEEEEECCCCCCHHHHHHHHH
Confidence            765  467888999999999975 56888999999999999999998876433345677799999987777888887655


Q ss_pred             -hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          385 -KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       385 -~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       ++||.+.++..+  ..++|+||+++..  .++|.++++++
T Consensus       348 ~~~gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  386 (394)
T PRK05942        348 QKTGVVVTPGNAFGEGGEGYVRISLIAD--CDRLGEALDRL  386 (394)
T ss_pred             HHCCEEEeCChhhCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence             899999998764  3468999999853  58899999886

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.5e-46  Score=363.14  Aligned_cols=324  Identities=24%  Similarity=0.372  Sum_probs=271.6

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHHHhc
Q 014492           97 IVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~~l~  167 (423)
                      +++|+.+.+++++++++.+++.+. .....|+++ |..+||+++++++    |  ++++ +|++|+|+++++..++..++
T Consensus         2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~   81 (350)
T TIGR03537         2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI   81 (350)
T ss_pred             eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence            589999999999899999998863 334678775 7899999999986    6  4676 99999999999999999999


Q ss_pred             CCC---CeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          168 DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       168 ~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      ++|   |.|+++.|+|..|...++..|++++.++.+  +++.+|++++++++. .++|++++++||||||.+++.+++++
T Consensus        82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~~  160 (350)
T TIGR03537        82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-EETKIVWINYPHNPTGATAPRSYLKE  160 (350)
T ss_pred             CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-hccEEEEEeCCCCCcCcccCHHHHHH
Confidence            887   699999999999999999999999999974  357789999999986 58999999999999999999888888


Q ss_pred             HHcC----CCEEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC--Cc
Q 014492          243 ILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VS  315 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~--~~  315 (423)
                      |++.    |+++|+||+|.++.++....... ...+++++++||||.+|++|+|+||+++++++++.+......++  .+
T Consensus       161 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~  240 (350)
T TIGR03537       161 TIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASP  240 (350)
T ss_pred             HHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCC
Confidence            7664    99999999999876543221111 13578999999999999999999999999999998887765543  45


Q ss_pred             HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492          316 VAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  395 (423)
Q Consensus       316 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~  395 (423)
                      .+.|.++..++.+.+|+++.+++++++++.+.+.|++.+.....|.+++|+|+++|++.++.++++.|.++||.|.++..
T Consensus       241 ~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~  320 (350)
T TIGR03537       241 DFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGIDAKDYALRLLENGIVVAPGEN  320 (350)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchh
Confidence            56788888888888889999999999999999999888643345667788999998777889999999999999999876


Q ss_pred             C--CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          396 K--ELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       396 ~--~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      +  ..++++||+++..  .+++.+++++++
T Consensus       321 f~~~~~~~~Ri~~~~~--~~~~~~~l~~~~  348 (350)
T TIGR03537       321 FGSGEEGYVRVALVPT--LEECEEALRLWE  348 (350)
T ss_pred             hCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence            4  3368999999743  377888888763

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=3.6e-46  Score=361.90  Aligned_cols=316  Identities=25%  Similarity=0.348  Sum_probs=270.3

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd  171 (423)
                      ..+++||+.|+|++++++.+++++.+. .....||++ |..++|+++++++++++++|++|+|+++++.++++  +.+| 
T Consensus        21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-   97 (349)
T PRK07908         21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-   97 (349)
T ss_pred             CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-
Confidence            467899999999999999999998873 333578765 78999999999999999999999999999999988  4665 


Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEE
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV  251 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li  251 (423)
                      .++++.|+|..+...++..|++++.+|.++++.+|++.+    . .++++++++|||||||.+++.+++.++++.+.++|
T Consensus        98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-~~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iI  172 (349)
T PRK07908         98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-DDADLVVIGNPTNPTSVLHPAEQLLALRRPGRILV  172 (349)
T ss_pred             eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-cCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEE
Confidence            567789999999999999999999999876688998855    2 47899999999999999999999999998888999


Q ss_pred             EccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC--
Q 014492          252 LDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN--  328 (423)
Q Consensus       252 ~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~--  328 (423)
                      +||+|.++..+.. .... ...+++++++||||.||++|+|+||+++++++++.+.+....++.+.+.+.++..++.+  
T Consensus       173 vDe~y~~~~~~~~~~l~~-~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  251 (349)
T PRK07908        173 VDEAFADAVPGEPESLAG-DDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRA  251 (349)
T ss_pred             EECcchhhccCCcccccc-ccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccc
Confidence            9999998764321 1111 23568999999999999999999999999999999988877788888888888888774  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--CCCeEEEE
Q 014492          329 PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVS  405 (423)
Q Consensus       329 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~iRis  405 (423)
                      .+++++.+++++++++++.+.|++++ +.+ .|++++|+|+++++   .+++.+.|+++||.++++..+.  .+++|||+
T Consensus       252 ~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~---~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis  327 (349)
T PRK07908        252 VAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD---AELLRKRLRERGIAVRRGDTFPGLDPDYLRLA  327 (349)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc---HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEE
Confidence            36788899999999999999998884 454 45899999999973   5788888889999999987642  36899999


Q ss_pred             ecChhhHHHHHHHHhhh
Q 014492          406 VGKPEHTDALMECLMHL  422 (423)
Q Consensus       406 ~~~~~~~~~l~~al~~l  422 (423)
                      ++.++++++|.++|+++
T Consensus       328 ~~~~~~~~~l~~al~~~  344 (349)
T PRK07908        328 VRPRAEVPVLVQALAEI  344 (349)
T ss_pred             eCCCccHHHHHHHHHHH
Confidence            99988999999999876

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=3.5e-46  Score=367.19  Aligned_cols=331  Identities=23%  Similarity=0.343  Sum_probs=277.0

Q ss_pred             HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHH
Q 014492           89 QLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELI  159 (423)
Q Consensus        89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al  159 (423)
                      .....+.++++|+.+++++++++.+.+++.+. . ....|+++ |.++||+++++++    |  +++++|++|+|+++++
T Consensus        24 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al  103 (388)
T PRK07337         24 ALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAAL  103 (388)
T ss_pred             HHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHH
Confidence            33344567899999999998889888888763 2 23568654 7899999999986    3  5789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .+++..++++||+|+++.|+|..+...++..|++++.+|.+  +++.+|++++++.+. +++++|++++||||||.+++.
T Consensus       104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~  182 (388)
T PRK07337        104 LLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-ERTRGVLLASPSNPTGTSIAP  182 (388)
T ss_pred             HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-ccceEEEEECCCCCCCcCcCH
Confidence            99999999999999999999999998888999999999975  357899999999986 689999999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--  311 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--  311 (423)
                      +++++|++.    ++++|+||+|.++.+.+.........+++++++||||.||++|+|+||+++++++++.+.+....  
T Consensus       183 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~  262 (388)
T PRK07337        183 DELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLF  262 (388)
T ss_pred             HHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhc
Confidence            998888764    89999999999887654322223335789999999999999999999999999999998877654  


Q ss_pred             CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-----CCCHHHHHHHH
Q 014492          312 YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMDAKKLKDDL  383 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-----~~~~~~l~~~L  383 (423)
                      .+.+.+.|.++..++.+.  +++++.++.++++++.+.+.|++++... +.|++|+|+|+++++     ..++.++++.|
T Consensus       263 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l  342 (388)
T PRK07337        263 ICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAM  342 (388)
T ss_pred             cCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHH
Confidence            367889999999998753  4567888999999999999999876432 468899999999974     25778888876


Q ss_pred             H-hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          384 A-KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~-~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      . ++||.+.++..+.   .++|+||+++..  .+.|.+++++|
T Consensus       343 l~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~--~~~l~~~l~rl  383 (388)
T PRK07337        343 LHDAGVVLVPGRDFGPHAPRDYIRLSYATS--MSRLEEAVARL  383 (388)
T ss_pred             HHhCCEEEeCchhhCCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            5 7899999887643   368999999974  48899999987

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=6.4e-46  Score=368.34  Aligned_cols=326  Identities=22%  Similarity=0.336  Sum_probs=270.4

Q ss_pred             CCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHh------CCCCCcEEEeCCHHHHH
Q 014492           94 PEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADELI  159 (423)
Q Consensus        94 ~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y~~-~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al  159 (423)
                      +.++|+|+.|++.    +++++++.+++.+. .  ....|++ .|.+++|+++++++      ++++++|++|+|+++++
T Consensus        51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al  130 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI  130 (430)
T ss_pred             CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence            5689999999885    77788888888762 2  2247865 48899999999997      35789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .++++.++++||+|++++|+|+.|...+...|++++.++.  +++|.+|++++++.++ .++++++++|||||||.+++.
T Consensus       131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPtG~v~~~  209 (430)
T PLN00145        131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD-ENTVAMVIINPNNPCGSVYSY  209 (430)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC-cCceEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999999999999884  3568899999999886 689999999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCcccccccc--CHHHHH-----
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIE-----  303 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~~~~-----  303 (423)
                      +++++|++.    |++||+||+|.++.++..   ....+...+++++++||||.|++||+|+||+++  ++.+++     
T Consensus       210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~  289 (430)
T PLN00145        210 EHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVV  289 (430)
T ss_pred             HHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHH
Confidence            888888653    999999999999886432   222334467899999999999999999999997  444433     


Q ss_pred             -HHHHhcCCC-CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCC----C
Q 014492          304 -YLWRAKQPY-NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTS----G  373 (423)
Q Consensus       304 -~l~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~----~  373 (423)
                       .+....... +.+.+.|.++..+|+.  .+|+++.++.++++++.+.+.|++++++.  ..|++++|+|++++.    +
T Consensus       290 ~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~  369 (430)
T PLN00145        290 DSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSG  369 (430)
T ss_pred             HHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCC
Confidence             343443332 4678999999999986  47899999999999999999999986655  358999999999863    2


Q ss_pred             -CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 -MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 -~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       .+..+++..|+ ++||.+.||..++.++|+||+++.+  .+.|.+++++|
T Consensus       370 ~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~--~~~l~~al~rl  418 (430)
T PLN00145        370 IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAID--PPSLEDGLERL  418 (430)
T ss_pred             CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence             25677887666 7899999998877789999999964  48899999887

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=5.5e-46  Score=367.15  Aligned_cols=328  Identities=21%  Similarity=0.305  Sum_probs=268.2

Q ss_pred             CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~  160 (423)
                      ..+.++|+|+.|++++++++.+.+++.+. .  ...+|+++ |..+||+++++++    |  ++++ +|++|+|+++++.
T Consensus        27 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~  106 (405)
T PRK09148         27 AAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA  106 (405)
T ss_pred             hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence            34567899999999998888888887653 2  23678665 7899999999987    4  4676 8999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCC--CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      .++..++++||+|++++|+|..|...++..|++++.+|.+.+  +..++++..+... .+++++++++||||||.+++.+
T Consensus       107 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~  185 (405)
T PRK09148        107 NMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLD  185 (405)
T ss_pred             HHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999999999999999999997533  3334444433332 5789999999999999999999


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~  310 (423)
                      ++++|++.    +++||+||+|.++.++...   ...+. ..+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus       186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~  265 (405)
T PRK09148        186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKS  265 (405)
T ss_pred             HHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHH
Confidence            88888764    9999999999998764322   22222 2356789999999999999999999999999999987765


Q ss_pred             --CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC---CCHHHHHHHHH
Q 014492          311 --PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG---MDAKKLKDDLA  384 (423)
Q Consensus       311 --~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~---~~~~~l~~~L~  384 (423)
                        .++.+.+.|.++..+|++ .+++++.++.++++++.+.+.|++.++....|++|+|+|+++|+.   .+..++++.|.
T Consensus       266 ~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll  345 (405)
T PRK09148        266 YLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLV  345 (405)
T ss_pred             HhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHH
Confidence              467889999999999975 578899999999999999999998764334588999999999853   34678888876


Q ss_pred             -hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          385 -KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       385 -~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       ++||.|.++..++  .++|+||+++.  +.++|.+++++|
T Consensus       346 ~~~gV~v~pg~~f~~~~~~~~Ri~~~~--~~~~l~~al~~l  384 (405)
T PRK09148        346 EKADVAVAPGVGFGEHGDGYVRIALVE--NEQRIRQAARNI  384 (405)
T ss_pred             HhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence             7899999987643  35899999983  358899999876

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=6.6e-46  Score=367.04  Aligned_cols=328  Identities=20%  Similarity=0.279  Sum_probs=274.6

Q ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~a  158 (423)
                      .+.++|+|+.|+++    +++++.+.+++.+ +.  ...+| |..|.+++|++++++++      +++++|++|+|++++
T Consensus        29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a  108 (409)
T PLN02656         29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA  108 (409)
T ss_pred             cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence            45789999999998    8888999998876 22  23578 56689999999999973      678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      +.+++.+++++||+|++++|+|+.|...++..|++++.+|.+  +++.+|++++++.+. .+++++++++||||||.+++
T Consensus       109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~s  187 (409)
T PLN02656        109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-QNTVALVIINPGNPCGNVYS  187 (409)
T ss_pred             HHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc-cCceEEEEECCCCCCCCCCC
Confidence            999999999999999999999999998888899999999963  467899999999886 67899999999999999999


Q ss_pred             HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC--------HHH
Q 014492          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSI  301 (423)
Q Consensus       237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~--------~~~  301 (423)
                      .+++++|++.    +++||+||+|.+|.+++.   ....+...+++++++||||.|+++|+|+||++++        +++
T Consensus       188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~  267 (409)
T PLN02656        188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKI  267 (409)
T ss_pred             HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHH
Confidence            9999888764    999999999999886542   2223344578999999999999999999999984        578


Q ss_pred             HHHHHHhcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCCC---
Q 014492          302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG---  373 (423)
Q Consensus       302 ~~~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~~---  373 (423)
                      ++++.+.... .+++.++|.++..+|++  .+++++.+++++++++.+.+.|+++++..  ..|.+|+|+|++++..   
T Consensus       268 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~  347 (409)
T PLN02656        268 VERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE  347 (409)
T ss_pred             HHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC
Confidence            8888776554 35788999999999974  46899999999999999999999876443  3578899999998621   


Q ss_pred             --CCHHHHH-HHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          374 --MDAKKLK-DDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       374 --~~~~~l~-~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                        .+..++. +.|.++||.+.|++.++.++++||+++..  .++|.+++++|+
T Consensus       348 ~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~--~e~l~eal~rl~  398 (409)
T PLN02656        348 DISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAAD--PSSLEEALGRIK  398 (409)
T ss_pred             CCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCC--HHHHHHHHHHHH
Confidence              2344554 55568999999998777789999999974  488999999873

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=7e-46  Score=367.35  Aligned_cols=327  Identities=20%  Similarity=0.289  Sum_probs=273.8

Q ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHhC------------CCCCcEEEe
Q 014492           93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSG------------LESDHILVG  152 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~g------------~~~~~i~~t  152 (423)
                      .+.++|+|+.|.++    +.+++.+.+++.+. .  ...+|+++ |..+||++++++++            +++++|++|
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it  110 (412)
T PTZ00433         31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC  110 (412)
T ss_pred             CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence            45688999999876    56788888888762 2  23679776 79999999999985            678999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      +|+++++.+++..++++||+|+++.|+|..|...++..|++++.+|.+  +++++|++++++.+. .++++|+++|||||
T Consensus       111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NP  189 (412)
T PTZ00433        111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-DRTKALIMTNPSNP  189 (412)
T ss_pred             CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-cCceEEEEeCCCCC
Confidence            999999999999999999999999999999999999999999999964  467999999999886 58999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCcccccccc--C---
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--P---  298 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~---  298 (423)
                      ||.+++.+++++|++.    |++||+||+|.+|.+++.   ....+....++++++||||.||++|+|+||+++  +   
T Consensus       190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~  269 (412)
T PTZ00433        190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN  269 (412)
T ss_pred             CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence            9999999999888764    999999999999876432   122222334689999999999999999999997  2   


Q ss_pred             -HHHHHHHHHhcC-CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-
Q 014492          299 -LSIIEYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-  372 (423)
Q Consensus       299 -~~~~~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-  372 (423)
                       +++++.+.+... .++++.+.|.++..++.+  .+|+++.++.++++++.+.+.|+++.++. ..|++|+|+|++++. 
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~  349 (412)
T PTZ00433        270 GGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLE  349 (412)
T ss_pred             HHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechh
Confidence             467777776654 368899999999988875  57899999999999999999998864444 457789999999974 


Q ss_pred             ---C-CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 ---G-MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 ---~-~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                         + .+..++++.|+ ++||.++++..+..++++||+++..+  +.+.+++++|
T Consensus       350 ~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~--e~l~~al~~l  402 (412)
T PTZ00433        350 KFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPV--EVLREAVERI  402 (412)
T ss_pred             hcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence               1 25788999987 68999999887766899999999763  6788888876

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=4.6e-46  Score=364.02  Aligned_cols=325  Identities=21%  Similarity=0.294  Sum_probs=265.7

Q ss_pred             HHHHHHhCCC-CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCC
Q 014492           84 EVLSIQLGRK-PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCG  154 (423)
Q Consensus        84 ~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G  154 (423)
                      ..+..++..+ +.++++|+.|++++++++.+.+++.+. .....|+++ |..+||+++++++    |  +++++|++|+|
T Consensus        12 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G   91 (374)
T PRK05839         12 RELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFG   91 (374)
T ss_pred             HHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecC
Confidence            3444445555 568999999999999999998888763 334678765 7889999998875    5  68899999999


Q ss_pred             HHHHHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          155 ADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       155 ~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      +++++..++..++  .+||.|+++.|+|..|...++..|++++.++.+  +++.+|+++.+  +  .++|+|++||||||
T Consensus        92 ~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~NP  167 (374)
T PRK05839         92 TREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPNNP  167 (374)
T ss_pred             cHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h--ccccEEEEeCCCCC
Confidence            9999999988764  478999999999999999999999999999975  34666655432  3  36999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch---hhh-----hccCCcEEEEccChhhhcccCccccccccC
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEW-----VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~-----~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                      ||.+++.+++++|++.    |++||+||+|.++.++...   ...     ....+++++++||||.|+++|+|+||++++
T Consensus       168 TG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~  247 (374)
T PRK05839        168 TGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD  247 (374)
T ss_pred             cCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC
Confidence            9999999999999864    9999999999998643322   111     123479999999999999999999999999


Q ss_pred             HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492          299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  376 (423)
Q Consensus       299 ~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~  376 (423)
                      +++++++.+...  .++.+.+.|.++..++.+.+++++.+++++++++.+.+.|.    .. .|++|+|+|++++   +.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~----~~-~p~gg~fi~~~~~---~~  319 (374)
T PRK05839        248 ASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILG----IT-IPPATFYVWLPVD---ND  319 (374)
T ss_pred             HHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcC----CC-CCCeeEEEEEeCC---Ch
Confidence            999999887754  35778889999988888888999999999999999888763    12 6889999999996   45


Q ss_pred             HHHHHHHH-hCCcEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          377 KKLKDDLA-KMGVMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       377 ~~l~~~L~-~~gI~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.++|. ++||.|+++..++    .++|+||+++..  .+++.+++++|
T Consensus       320 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~l~~l  368 (374)
T PRK05839        320 EEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYD--TPKLEKALEII  368 (374)
T ss_pred             HHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            78888887 5999999976532    358999999864  47888888876

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=1.3e-45  Score=364.48  Aligned_cols=327  Identities=19%  Similarity=0.271  Sum_probs=272.6

Q ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHHhC-----CCCCcEEEeCCHHHHH
Q 014492           93 KPEDIVKIDANENP----YGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI  159 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~~--~~~Y-~~~g~~~lr~~ia~~~g-----~~~~~i~~t~G~~~al  159 (423)
                      ++.++++|+.|+++    +++++.+.+++.+. ..  ...| |..|..+||++++++++     +++++|++|+|+++++
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al  108 (401)
T TIGR01264        29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI  108 (401)
T ss_pred             cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence            34678999999874    78889998888763 22  2458 66789999999999986     6889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .+++.+++++||+|+++.|+|..|...++..|++++.++.+  +++++|++.+++.+. .++++++++|||||||.+++.
T Consensus       109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~  187 (401)
T TIGR01264       109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-EKTAALIVNNPSNPCGSVFSR  187 (401)
T ss_pred             HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-cCceEEEEcCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999864  357899999999886 578999999999999999999


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCH------HHHHH
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEY  304 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~------~~~~~  304 (423)
                      +++++|++.    +++||+||+|.+|.+.+.   .........++|+++||||.|+++|+|+||+++++      ++++.
T Consensus       188 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~  267 (401)
T TIGR01264       188 QHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDG  267 (401)
T ss_pred             HHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHH
Confidence            998888764    999999999999876432   12222223458999999999999999999999874      45566


Q ss_pred             HHHhcC-CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-----CCC
Q 014492          305 LWRAKQ-PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-----GMD  375 (423)
Q Consensus       305 l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-----~~~  375 (423)
                      +.+... .++++.+.|.++..+|.+  .+++++.++.++++++.+.+.|++++++. ..|++|+|+|++++.     ..+
T Consensus       268 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~  347 (401)
T TIGR01264       268 LVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKN  347 (401)
T ss_pred             HHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCC
Confidence            655544 467889999999999976  57899999999999999999999885454 468899999999753     236


Q ss_pred             HHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          376 AKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       376 ~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ..++++.|. ++||.+++++.+..++++||+++..+  +.+.+++++|
T Consensus       348 ~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~rl  393 (401)
T TIGR01264       348 DVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPV--VMMEEACSRI  393 (401)
T ss_pred             HHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence            788888886 89999999877666899999999753  6788888876

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=1.1e-45  Score=362.71  Aligned_cols=326  Identities=21%  Similarity=0.335  Sum_probs=270.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHh----CCC--C-CcEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~----g~~--~-~~i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.|++++++++.+.+++.+. . ....| |..|..+||+++++++    |++  + ++|++|+|+++++..+++
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~  108 (384)
T PRK12414         29 HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAIS  108 (384)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHH
Confidence            46899999999999999988888762 2 22568 4568899999999874    663  3 689999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +++++||+|+++.|+|..+...++..|++++.+|.+ +++.+|++.+++.+. .++++|+++|||||||.+++.+++++|
T Consensus       109 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i  187 (384)
T PRK12414        109 ALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARL  187 (384)
T ss_pred             HhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999975 467899999999996 689999999999999999999999888


Q ss_pred             HcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492          244 LEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~  313 (423)
                      ++.    ++++|+||+|.++.+++..   ..... ..+++++++||||.||++|+|+||+++++++++.+.+...  .++
T Consensus       188 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~  267 (384)
T PRK12414        188 AQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFS  267 (384)
T ss_pred             HHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecC
Confidence            763    9999999999998764422   11112 2468999999999999999999999999999999888763  478


Q ss_pred             CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--CCCHHHHHH-HHHhCCcEE
Q 014492          314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKD-DLAKMGVMI  390 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--~~~~~~l~~-~L~~~gI~v  390 (423)
                      .+.+.|.++..+|+++.+..+.++.++++++.+.+.|++.++....+.+++|+|+++++  ..+..+++. .|.++||.+
T Consensus       268 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v  347 (384)
T PRK12414        268 ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVAT  347 (384)
T ss_pred             CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEE
Confidence            89999999999998866666788889999999999999886322345677889988864  234566664 455899999


Q ss_pred             EeCCCCC----CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          391 RHYNNKE----LKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       391 ~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      .+++.+.    ..+++||+++..  .+++.+++++|.
T Consensus       348 ~pg~~f~~~~~~~~~iRis~~~~--~~~~~~~~~rl~  382 (384)
T PRK12414        348 IPLSAFYTDGTDTGLIRLSFSKD--DATLVEGARRLC  382 (384)
T ss_pred             ecchhhcCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence            9987532    257999999974  488999999873

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=2.6e-46  Score=374.18  Aligned_cols=327  Identities=19%  Similarity=0.270  Sum_probs=264.0

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcCC--------------CCCCCCCc-chHHHHHHHHHHhC--------CCCCcEE
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQLK--------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHIL  150 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~--------------~~~~Y~~~-g~~~lr~~ia~~~g--------~~~~~i~  150 (423)
                      +..+|+|+.+||++.. +.+.+.+....              ...+|+++ |.++||+++|++++        +++++|+
T Consensus        37 p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Ii  115 (468)
T PLN02450         37 PSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLV  115 (468)
T ss_pred             CCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeE
Confidence            4568999999999876 66666665421              11348765 78899999999973        5889999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecC--CCCCCCCHHHHHHHhhc-----CCceEE
Q 014492          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPR--KSDFSLNVELIADAVER-----EKPKCI  222 (423)
Q Consensus       151 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i  222 (423)
                      +|+|+++++..++.++++|||.|+++.|+|+.|...+. ..|++++.||.  ++++.+|++++++.+.+     .++|+|
T Consensus       116 it~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v  195 (468)
T PLN02450        116 LTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGV  195 (468)
T ss_pred             EccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence            99999999999999999999999999999999988777 58999999996  36778899999988753     378999


Q ss_pred             EEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC-ch---hhhhc--------cCCcEEEEccChhhhc
Q 014492          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVK--------KHDNLIVLRTFSKRAG  286 (423)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~-~~---~~~~~--------~~~~~i~i~S~SK~~g  286 (423)
                      ++||||||||.+++.+++++|++.    +++||+||+|.++.+.+ ..   .....        ..+++++++||||.||
T Consensus       196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~  275 (468)
T PLN02450        196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG  275 (468)
T ss_pred             EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence            999999999999999999998874    99999999999876543 11   22211        3578999999999999


Q ss_pred             ccCccccccccCHH-HHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecCC
Q 014492          287 LAGLRVGYGAFPLS-IIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYPS  361 (423)
Q Consensus       287 ~~G~R~G~i~~~~~-~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~  361 (423)
                      ++|+|+||++++++ +++.+.+....+.++.++|.++..+|++.+    ++++.+++++++++.+.+.|++++.....|.
T Consensus       276 l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~  355 (468)
T PLN02450        276 LPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSN  355 (468)
T ss_pred             CCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence            99999999999754 566666654445679999999999999863    6778899999999999999998864334566


Q ss_pred             CceEEEEEeCCCCC------HHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMD------AKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~------~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|+|+|+++++..+      ..++.+.|. ++||.+.||..+  ..++|+||+++..++ +++.+++++|
T Consensus       356 ~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~-~~l~~~l~ri  424 (468)
T PLN02450        356 AGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSE-ETLDLAMKRL  424 (468)
T ss_pred             ceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCH-HHHHHHHHHH
Confidence            78899999974322      245677776 689999998764  346899999996332 6788888776

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=3.1e-46  Score=372.18  Aligned_cols=321  Identities=18%  Similarity=0.231  Sum_probs=265.9

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCC-CCCCCCCc-chHHHHHHHHHHhC--CC-CCcEEEeCCHHHHHHHHHHHhcCC
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLK-FPYIYPDP-ESRRLRAALAKDSG--LE-SDHILVGCGADELIDLIMRCVLDP  169 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~-~~~~Y~~~-g~~~lr~~ia~~~g--~~-~~~i~~t~G~~~al~~~~~~l~~~  169 (423)
                      ..+++|+.+.++.+++|.+.+++.+.. ....|+++ |..+||++++++++  +. +++|++|+|+++++.++++++++|
T Consensus        85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~p  164 (431)
T PRK15481         85 TPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLP  164 (431)
T ss_pred             chhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCC
Confidence            356899998877777677778877632 23568765 67899999999986  33 469999999999999999999999


Q ss_pred             CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHc---
Q 014492          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE---  245 (423)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~---  245 (423)
                      ||.|++++|+|..|...++..|++++.+|.+++ ++|+++++++++ .++|+++++ |||||||.+++.+++++|++   
T Consensus       165 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~-~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~  242 (431)
T PRK15481        165 GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALA-QGARAVILTPRAHNPTGCSLSARRAAALRNLLA  242 (431)
T ss_pred             CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh-cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence            999999999999999999999999999998644 699999999986 589999998 99999999999996666654   


Q ss_pred             -C-CCEEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHH
Q 014492          246 -M-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEV  320 (423)
Q Consensus       246 -~-~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~  320 (423)
                       . +++||+||+|.+|.+.+.. ..+ ...+++++++||||.|| +|+|+||+++++++++.+.+....  +++|.++|.
T Consensus       243 ~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~  320 (431)
T PRK15481        243 RYPQVLVIIDDHFALLSSSPYH-SVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQD  320 (431)
T ss_pred             hcCCceEEecCchhhhccCCCC-CCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHH
Confidence             3 8899999999998754321 111 13578999999999999 999999999999999988765544  568999999


Q ss_pred             HHHHHhCChH---HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014492          321 AACAALQNPI---YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE  397 (423)
Q Consensus       321 a~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~  397 (423)
                      ++..+|++++   |+++.++.++++++.+.+.|++.+.....|++|+|+|+++++  +..++++.|.++||.+.++..+.
T Consensus       321 a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~  398 (431)
T PRK15481        321 LVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFG  398 (431)
T ss_pred             HHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCccc
Confidence            9999998854   578899999999999999999875433478999999999974  57889999999999999987642


Q ss_pred             C---CCeEEEEecChhhHHHHHHHHhhh
Q 014492          398 L---KGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       398 ~---~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .   .+++||+++..++ +++.+++++|
T Consensus       399 ~~~~~~~iRis~~~~~~-~~i~~~~~~l  425 (431)
T PRK15481        399 VSAPSHGLRITLSTLND-AEINRLAADL  425 (431)
T ss_pred             cCCCCCeEEEEcCCCCh-HHHHHHHHHH
Confidence            2   4689999997543 6677777665

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-45  Score=362.79  Aligned_cols=335  Identities=20%  Similarity=0.298  Sum_probs=271.5

Q ss_pred             HHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CC--CCCCCCC-cchHHHHHHHHHHh----C--CCCC-cEEEeCC
Q 014492           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCG  154 (423)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y~~-~g~~~lr~~ia~~~----g--~~~~-~i~~t~G  154 (423)
                      ...+....+.++++|+.+.++...++.+.+++.+ ..  ...+|++ .|..+||+++++++    |  ++++ +|++|+|
T Consensus        24 ~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G  103 (403)
T PRK08636         24 LKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMG  103 (403)
T ss_pred             HHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCC
Confidence            3444444556789999998887767766666554 32  2367866 48899999999986    5  4666 7999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHH----HHHhhc--CCceEEEEcC
Q 014492          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELI----ADAVER--EKPKCIFLTS  226 (423)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l----~~~i~~--~~~~~i~l~~  226 (423)
                      +++++.+++++++++||.|++++|+|+.+...++..|++++.+|.  ++++++|++.+    ++.+++  .+++++++|+
T Consensus       104 ~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~  183 (403)
T PRK08636        104 SKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNF  183 (403)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeC
Confidence            999999999999999999999999999999999999999999986  35678998754    555542  4789999999


Q ss_pred             CCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccC
Q 014492          227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       227 p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                      ||||||.+++.+++++|++.    +++||+||+|.++.+++.   ....++. .+++++++||||.||++|+|+||++++
T Consensus       184 P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~  263 (403)
T PRK08636        184 PHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN  263 (403)
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCC
Confidence            99999999999999998875    999999999999876532   1222322 356788999999999999999999999


Q ss_pred             HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC--
Q 014492          299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG--  373 (423)
Q Consensus       299 ~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~--  373 (423)
                      +++++.+.+...  .++.+.+.|.++..+++. .+|++++++.++++++.+.+.|++.++....|.+|+|+|+++|+.  
T Consensus       264 ~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~  343 (403)
T PRK08636        264 KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPAR  343 (403)
T ss_pred             HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccC
Confidence            999998887765  356778888888888763 578899999999999999999998764334678999999999853  


Q ss_pred             -CCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 -MDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 -~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       .++.++.+.++ ++||.+.++..++  .++++||+++.  +.++|.+++++|
T Consensus       344 ~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~~~rl  394 (403)
T PRK08636        344 HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE--NENRIRQAARNI  394 (403)
T ss_pred             CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC--CHHHHHHHHHHH
Confidence             35688887765 7899999987643  35899999984  348899999887

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=1.4e-45  Score=361.65  Aligned_cols=325  Identities=24%  Similarity=0.393  Sum_probs=272.4

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.|++++++++.+.+++.+. . ....|+ ..|..++|+++++++    |  ++++ +|++|+|+++++.++++
T Consensus        20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~   99 (378)
T PRK07682         20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR   99 (378)
T ss_pred             CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            45799999999998888887777652 2 225685 568999999999997    3  4565 89999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      +++++||.|++++|+|+.|...++..|++++.++.+  +++++|++++++.+. .+++++++++||||||.+++.+++++
T Consensus       100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~s~~~~~~  178 (378)
T PRK07682        100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-AKTKAILLCSPNNPTGAVLNKSELEE  178 (378)
T ss_pred             HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-cccEEEEEECCCCCcCcCcCHHHHHH
Confidence            999999999999999999999999999999999864  467899999999986 58999999999999999999988888


Q ss_pred             HHcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492          243 ILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~  313 (423)
                      |++.    ++++|+||+|.++.+++..  ...+ +..+++++++||||.||++|+|+||+++++++++.+.+...  .++
T Consensus       179 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~  258 (378)
T PRK07682        179 IAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMC  258 (378)
T ss_pred             HHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccC
Confidence            8764    9999999999999875432  1222 22478999999999999999999999999999999876654  356


Q ss_pred             CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcEE
Q 014492          314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMI  390 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~v  390 (423)
                      .+.++|.++..+|++ ..++++.++.++++++.+.+.|++++.....|.+++|+|++++. +.++.++.+.|+ ++||.+
T Consensus       259 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v  338 (378)
T PRK07682        259 APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAV  338 (378)
T ss_pred             CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEE
Confidence            889999999999987 46788899999999999999999886433457788899998853 568899998886 789999


Q ss_pred             EeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          391 RHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       391 ~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +++..+.  .++++||+++..  .+++.+++++|
T Consensus       339 ~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  370 (378)
T PRK07682        339 VPGSVFGESGEGFIRCSYATS--LEQLQEAMKRM  370 (378)
T ss_pred             cCchhhCcCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence            9987532  368999999974  37788888876

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=8.3e-46  Score=371.78  Aligned_cols=328  Identities=21%  Similarity=0.293  Sum_probs=258.3

Q ss_pred             CCCeeEcCCCCCCC--CC-CHHHHHHHhc----------CCCCCCCCC-cchHHHHHHHHHHhC--------CCCCcEEE
Q 014492           94 PEDIVKIDANENPY--GP-PPEVREALGQ----------LKFPYIYPD-PESRRLRAALAKDSG--------LESDHILV  151 (423)
Q Consensus        94 ~~~~i~l~~~~~~~--~~-~~~v~~al~~----------~~~~~~Y~~-~g~~~lr~~ia~~~g--------~~~~~i~~  151 (423)
                      +..+|+|+.+||++  .. .+.+.+....          ......|++ .|.++||+++|++++        +++++|++
T Consensus        45 p~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi  124 (496)
T PLN02376         45 PHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVM  124 (496)
T ss_pred             CCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEE
Confidence            45689999999988  33 3334333221          111134544 378999999999974        68999999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecCC--CCCCCCHHHHHHHhh-----cCCceEEE
Q 014492          152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCIF  223 (423)
Q Consensus       152 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~-----~~~~~~i~  223 (423)
                      |+|+++++..++.++++|||.|+++.|+|+.|...++ ..|++++.+|.+  +++++|+++++.++.     ..++|+|+
T Consensus       125 t~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~  204 (496)
T PLN02376        125 SGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLI  204 (496)
T ss_pred             ccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEE
Confidence            9999999999999999999999999999999998777 589999999974  568999999987642     14789999


Q ss_pred             EcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-hh--hhh-cc-------CCcEEEEccChhhhccc
Q 014492          224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-RM--EWV-KK-------HDNLIVLRTFSKRAGLA  288 (423)
Q Consensus       224 l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-~~--~~~-~~-------~~~~i~i~S~SK~~g~~  288 (423)
                      +||||||||.+++.+++++|++.    +++||+||+|.++.+.+. ..  ..+ ..       .+++++++||||.||+|
T Consensus       205 l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp  284 (496)
T PLN02376        205 LTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP  284 (496)
T ss_pred             EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC
Confidence            99999999999999999998875    999999999999875432 11  111 11       13577899999999999


Q ss_pred             CccccccccC-HHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHH----HHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492          289 GLRVGYGAFP-LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY----LEKVKEALIKERERLFKLLKDVPFLNPYPSYS  363 (423)
Q Consensus       289 G~R~G~i~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  363 (423)
                      |+|+||++++ +.+.+.+......+.++.+.|.++..+|++++|    +++.+++++++++.+.+.|++.+.....+.+|
T Consensus       285 GlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG  364 (496)
T PLN02376        285 GFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAG  364 (496)
T ss_pred             cceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCce
Confidence            9999999995 566666655555567899999999999998665    44568889999999999998875433457788


Q ss_pred             eEEEEEeCCCC-------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          364 NFILCEVTSGM-------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       364 ~~~~~~~~~~~-------~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|+|+++++..       +..++++.|. +.||.+.||..+  ..++|+||+|+..++ +.|.+++++|
T Consensus       365 ~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~-~~l~~al~rl  432 (496)
T PLN02376        365 LFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDD-DTLHVALGRI  432 (496)
T ss_pred             EEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCH-HHHHHHHHHH
Confidence            99999997432       2367888887 569999998874  347899999996443 7899999887

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.3e-45  Score=358.39  Aligned_cols=325  Identities=23%  Similarity=0.352  Sum_probs=274.9

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~-~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      .++++|+.|++++++++.+.+++.+. . ....|++ .|.+++|+++++++    |  +++++|++|+|+++++..++..
T Consensus        24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~  103 (382)
T PRK06108         24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQA  103 (382)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHH
Confidence            45799999999999999999998773 2 2245865 58899999999986    6  7889999999999999999999


Q ss_pred             hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      ++++||.|+++.|+|..+...++..|++++.+|.+   .+|.+|++++++.+. .+++++++++||||||.+++.+++++
T Consensus       104 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~p~NPtG~~~~~~~~~~  182 (382)
T PRK06108        104 LVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRA  182 (382)
T ss_pred             hcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-ccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999974   346799999999886 68999999999999999999998888


Q ss_pred             HHcC----CCEEEEccCCccccCC-C-ch---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--C
Q 014492          243 ILEM----PILVVLDEAYTEFSGL-E-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~-~-~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~  311 (423)
                      |++.    |+++|+||+|.++.++ + ..   .......+++++++||||.||++|+|+||+++++++++.+.+...  .
T Consensus       183 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~  262 (382)
T PRK06108        183 ILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT  262 (382)
T ss_pred             HHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc
Confidence            8764    9999999999998764 2 11   222223578999999999999999999999999999998876653  3


Q ss_pred             CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014492          312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGV  388 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI  388 (423)
                      ++++.+.|.++..+|.+ .+++++.+++++++++.+.+.|++++++.+ .|.+++|+|+++++..+..++++.|. ++||
T Consensus       263 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV  342 (382)
T PRK06108        263 SCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGL  342 (382)
T ss_pred             cCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCE
Confidence            56788999999999987 468899999999999999999988755554 46778999999986667889999886 7899


Q ss_pred             EEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          389 MIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++++..+  ..++++||+++.  +.+++.+++++|
T Consensus       343 ~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l  376 (382)
T PRK06108        343 GLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERL  376 (382)
T ss_pred             EEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHH
Confidence            99988753  346899999998  358899998876

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.8e-45  Score=357.80  Aligned_cols=326  Identities=23%  Similarity=0.321  Sum_probs=271.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCC-CcchHHHHHHHHHHh----CC--C-CCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP-DPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~-~~g~~~lr~~ia~~~----g~--~-~~~i~~t~G~~~al~~~~  163 (423)
                      .+.++|+.|++++++++.+.+++.+. .  ....|+ ..|..++|+++++++    |+  + +++|++|+|+++++..++
T Consensus        27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~  106 (389)
T PRK05957         27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI  106 (389)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence            35799999999999999999998763 2  224674 457788888887765    65  3 678999999999999999


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      ..++++||+|++++|+|..+...++..|++++.+|.++++++|++++++.++ +++|+|+++|||||||.+++.+++++|
T Consensus       107 ~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i  185 (389)
T PRK05957        107 LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAV  185 (389)
T ss_pred             HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHH
Confidence            9999999999999999999888888899999999987788999999999996 689999999999999999997777776


Q ss_pred             HcC----CCEEEEccCCccccCCCc----hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492          244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~  313 (423)
                      ++.    |++||+||+|.++.++..    .....+..+++|+++||||.||++|+|+||+++++++++++......  .+
T Consensus       186 ~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~  265 (389)
T PRK05957        186 NQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILIC  265 (389)
T ss_pred             HHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccC
Confidence            653    999999999999886532    11222345689999999999999999999999999999999887754  45


Q ss_pred             CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCC-ee-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014492          314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFL-NP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~  389 (423)
                      .+.+.|.++..+|++ .+|+++.++.++++++.+.+.|++++++ .+ .|.+++|+|++++.+.++.++++.|. ++||.
T Consensus       266 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~  345 (389)
T PRK05957        266 PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVA  345 (389)
T ss_pred             CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEE
Confidence            678899999999987 5688889899999999999999987653 43 35668999999987788999999987 68999


Q ss_pred             EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.++..++  .++++||+++..+ .+++.+++++|
T Consensus       346 v~pg~~f~~~~~~~iRis~~~~~-~~~l~~~~~~l  379 (389)
T PRK05957        346 VIPGTTFGMKNGCYLRIAYGALQ-KATAKEGIERL  379 (389)
T ss_pred             EccchhhCCCCCCEEEEEEecCC-HHHHHHHHHHH
Confidence            99987642  2569999998644 36777777765

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=6.2e-45  Score=358.08  Aligned_cols=333  Identities=19%  Similarity=0.278  Sum_probs=277.1

Q ss_pred             HHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHH
Q 014492           88 IQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADE  157 (423)
Q Consensus        88 ~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~  157 (423)
                      .++..++.+.++|+.+++++.+++.+.+++.+.   .....| +..|.++||++++++++      +++++|++|+|+++
T Consensus        22 ~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~  101 (386)
T PRK07550         22 AGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQ  101 (386)
T ss_pred             HHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHH
Confidence            334345667899999999998888888888763   123568 45689999999999873      57899999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++..++.+++++||+|+++.|+|..+...++..|++++.++.+  +++.+|++++++.++ .+++++++++||||||.++
T Consensus       102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~~~~P~NPtG~~~  180 (386)
T PRK07550        102 AFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-PRTRAIALVTPNNPTGVVY  180 (386)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-ccCcEEEEeCCCCCCCccc
Confidence            9999999999999999999999999999999999999999975  356789999999997 5899999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCCc-hhhhh---ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~---~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~  307 (423)
                      +.+++++|++.    |++||+||+|.+|.+... .....   +..+++++++||||.||++|+|+||+++++++++.+.+
T Consensus       181 ~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~  260 (386)
T PRK07550        181 PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEK  260 (386)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHH
Confidence            98877777664    999999999998865322 11111   22468999999999999999999999999999988887


Q ss_pred             hcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHH
Q 014492          308 AKQP--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL  383 (423)
Q Consensus       308 ~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L  383 (423)
                      ....  .+++.++|.++..++++ .+|.++.++.++++++.+.+.|++++.+.+.+.+++|+|++++. +.++.++++.|
T Consensus       261 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l  340 (386)
T PRK07550        261 FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELLASGAYFAYVRHPFPDRPSREVARRL  340 (386)
T ss_pred             HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEEEEecCCCCCCCHHHHHHHH
Confidence            7654  45688999999999987 67888899999999999999998874455567889999999986 67899999987


Q ss_pred             H-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          384 A-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      . ++||.+.++..+  ..++++||+++..+ .+++.+++++|
T Consensus       341 ~~~~gv~v~pg~~f~~~~~~~iRis~~~~~-~~~~~~~~~~l  381 (386)
T PRK07550        341 AKEAGILCLPGTMFGPGQEGYLRLAFANAD-VAGIGELVERL  381 (386)
T ss_pred             HHhcCEEEeCchhhCCCCCCEEEEEeecCC-HHHHHHHHHHH
Confidence            6 789999998763  23679999998644 37788887776

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=5.4e-45  Score=350.55  Aligned_cols=312  Identities=22%  Similarity=0.297  Sum_probs=258.2

Q ss_pred             hHHHHHHhCCCCCCeeEcCCCCCCCCCCH-HHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           83 FEVLSIQLGRKPEDIVKIDANENPYGPPP-EVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ...++...|....++|+|+.|+|++++++ .+.+.  .   ...||++. .+||++++++++.  ++|++|+|+++++.+
T Consensus         8 ~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~~~~~--~---~~~yp~~~-~~Lr~~ia~~~~~--~~I~it~Gs~~al~~   79 (330)
T PRK05664          8 LRRAAQRYGIPLADWLDLSTGIAPWPWPVPAIPAD--A---WARLPETD-DGLEAAARAYYGA--PQLLPVAGSQAAIQA   79 (330)
T ss_pred             HHHHHHHcCCCHHHheeecCCcCCCCCCCcccCHH--H---HHhCCCCh-HHHHHHHHHHhCC--CCEEECcCHHHHHHH
Confidence            44455556655567899999999997763 22111  1   13488754 8999999999995  699999999999998


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++.  +.+||+|++++|+|+.|...++..|++++.+|.+        ++++.+.  +++++++||||||||.+++.++++
T Consensus        80 ~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--------~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~  147 (330)
T PRK05664         80 LPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA--------EVEAALD--SLDVLVVVNPNNPTGRRFDPARLL  147 (330)
T ss_pred             HHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh--------hHhhhhc--CCCEEEEeCCcCCCCCccCHHHHH
Confidence            864  5799999999999999999999999999999853        3455553  678899999999999999999999


Q ss_pred             HHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHH
Q 014492          242 KILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA  317 (423)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~  317 (423)
                      +|++.    +++||+||+|.++...++. ..+...+++++++||||.||++|+|+||+++++++++.+.+...+++++.+
T Consensus       148 ~l~~~~~~~~~~iI~DE~y~~~~~~~s~-~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~~~~~~  226 (330)
T PRK05664        148 AWHARLAARGGWLVVDEAFMDNTPQHSL-AACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVSGP  226 (330)
T ss_pred             HHHHHHHhcCCEEEEECCcccCCCcccc-cccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCCCCCHH
Confidence            98753    8999999999987643332 233346789999999999999999999999999999999988888899999


Q ss_pred             HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014492          318 AEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE  397 (423)
Q Consensus       318 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~  397 (423)
                      +|.++..+|.+.++.++.++.++++++++.+.|++++ +.+.++.++|+|++++   ++.++.+.|.++||.|+.+.   
T Consensus       227 ~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~~~f~~~~~~---~~~~~~~~l~~~gi~v~~f~---  299 (330)
T PRK05664        227 TRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-LTPAGGCALFQWVRTE---DAAALHEFLARRGILTRLFE---  299 (330)
T ss_pred             HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCcceEEEEecC---CHHHHHHHHHHCCeEEEECC---
Confidence            9999999999888888899999999999999999885 3333444488998875   67899999999999998754   


Q ss_pred             CCCeEEEEec-ChhhHHHHHHHHhhh
Q 014492          398 LKGYVRVSVG-KPEHTDALMECLMHL  422 (423)
Q Consensus       398 ~~~~iRis~~-~~~~~~~l~~al~~l  422 (423)
                      ..+++||+++ +.+++++|.++|+++
T Consensus       300 ~~~~iRis~~~~~~~~~~l~~al~~~  325 (330)
T PRK05664        300 QPASLRFGLPADEADWARLDQALLAY  325 (330)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHHHH
Confidence            3579999999 677789999999876

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=4.6e-45  Score=361.31  Aligned_cols=318  Identities=22%  Similarity=0.338  Sum_probs=257.3

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C------CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELI  159 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al  159 (423)
                      +.++++|+.|++++++++.+.+++.+. .      ...+| |..|.++||+++++++      ++++++|++|+|+++++
T Consensus        33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al  112 (409)
T PRK07590         33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT  112 (409)
T ss_pred             CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence            456899999999999999888877652 1      22568 6678999999999986      67899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCe-----------EEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcC
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTS  226 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~  226 (423)
                      .++.. ++.+||+|++++|+|+.|...++..|.+           ++.+|.+.  ++.+|++       ++++|+|++||
T Consensus       113 ~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~n  184 (409)
T PRK07590        113 GNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-------EEKVDIIYLCF  184 (409)
T ss_pred             HHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc-------ccCceEEEEeC
Confidence            98764 6789999999999999999999999987           88888753  3444422       25899999999


Q ss_pred             CCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch---hhhhcc-CCcEEEEccChhhhcccCccccccccC
Q 014492          227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       227 p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                      ||||||.+++.+++++|++.    +++||+||+|.+|.+++..   ...++. .+++|+++||||.||++|+|+||++++
T Consensus       185 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~  264 (409)
T PRK07590        185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP  264 (409)
T ss_pred             CCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence            99999999999999998764    9999999999998764421   222222 357899999999999999999999999


Q ss_pred             HHHHHHH------------HH-hcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCC
Q 014492          299 LSIIEYL------------WR-AKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPS  361 (423)
Q Consensus       299 ~~~~~~l------------~~-~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~  361 (423)
                      +++++.+            .. .... .+++.++|.++..++.+  .+|+++.++.++++++.+.+.|++.+ +.+ .|.
T Consensus       265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~  343 (409)
T PRK07590        265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FEVYGGV  343 (409)
T ss_pred             HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC
Confidence            9988721            11 1222 35788999999888875  46888999999999999999999885 444 456


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +++|+|++++++.++.++++.|. ++||.+.+++.++  ..+++||++...  .+++.+++++|
T Consensus       344 g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~l~rl  405 (409)
T PRK07590        344 NAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGS--RENVLEAMERI  405 (409)
T ss_pred             cceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCC--HHHHHHHHHHH
Confidence            89999999987778888998887 6799999987632  357999997543  36788888876

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=1.6e-44  Score=347.38  Aligned_cols=322  Identities=32%  Similarity=0.465  Sum_probs=275.3

Q ss_pred             CCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHH
Q 014492           80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI  159 (423)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al  159 (423)
                      +++++..++++|.+.++.++|+.|+|+++++  ..+..  .....+||++..+++|+++++++|+++++|++|+|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i   77 (330)
T TIGR01140         2 GGNLRRAAARYGIPPEDWLDFSTGINPLGPP--VPPIP--ASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAI   77 (330)
T ss_pred             CccHHHHHHHcCCChhheeEccccCCCCCCC--hhhcc--hHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHH
Confidence            4678889999999989999999999999875  22211  1122668877679999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      ..+.+. +.+| .|+++.|+|..|...++..|.+++.++       |++++++.+.  +++++++++||||||.+++.++
T Consensus        78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~  146 (330)
T TIGR01140        78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPET  146 (330)
T ss_pred             HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHH
Confidence            998765 5777 699999999999999999999999987       7899999884  5789999999999999999999


Q ss_pred             HHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCc
Q 014492          240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS  315 (423)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~  315 (423)
                      +++|++.    |++||+||+|.++....+.....+..+++++++||||.||++|+|+||+++++++++.+......++.+
T Consensus       147 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~s  226 (330)
T TIGR01140       147 LLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPWTVN  226 (330)
T ss_pred             HHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCCCch
Confidence            9888764    999999999998876533333233468899999999999999999999999999999999888788899


Q ss_pred             HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492          316 VAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  395 (423)
Q Consensus       316 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~  395 (423)
                      .++|.++..++++.+|.+..+++++++++.+.+.|++++.+.+.|+.++|+|++++   +..+++++|.++||.+.++..
T Consensus       227 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~---~~~~l~~~l~~~gi~v~pg~~  303 (330)
T TIGR01140       227 GPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTP---DAAALHEALARRGILIRDFDN  303 (330)
T ss_pred             HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcC---CHHHHHHHHHHCCEEEEECCC
Confidence            99999999999988888889999999999999999999877777888999999986   467899999999999999887


Q ss_pred             CC--CCCeEEEEecChhhHHHHHHHH
Q 014492          396 KE--LKGYVRVSVGKPEHTDALMECL  419 (423)
Q Consensus       396 ~~--~~~~iRis~~~~~~~~~l~~al  419 (423)
                      +.  ..+++||++++..+.+.|..++
T Consensus       304 f~~~~~~~iRi~~~~~~~~~~~~~~l  329 (330)
T TIGR01140       304 FPGLDPRYLRFALPTDEENDRLEEAL  329 (330)
T ss_pred             CCCCCCCEEEEEecCHHHHHHHHHhh
Confidence            43  3579999999876556666655

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-44  Score=354.47  Aligned_cols=325  Identities=23%  Similarity=0.419  Sum_probs=272.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      .++++|+.|++++++++.+.+++.+. . ....| |..|.++||+++++++      ++++++|++|+|+++++.+++..
T Consensus        33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~  112 (391)
T PRK08361         33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES  112 (391)
T ss_pred             cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence            46799999999998888888888763 2 22457 6678999999999987      36789999999999999999999


Q ss_pred             hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      ++++||.|++++|+|..+...++..|++++.+|.+.  ++.+|++++++.+. .+++++++++||||||.+++.+++++|
T Consensus       113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~i~~p~NPtG~~~~~~~~~~l  191 (391)
T PRK08361        113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-KRTRMIVINYPNNPTGATLDKEVAKAI  191 (391)
T ss_pred             hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence            999999999999999999999999999999999653  56799999999997 679999999999999999997777776


Q ss_pred             Hc---C-CCEEEEccCCccccCCCc-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCc
Q 014492          244 LE---M-PILVVLDEAYTEFSGLES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVS  315 (423)
Q Consensus       244 ~~---~-~~~li~Deay~~~~~~~~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~  315 (423)
                      ++   . ++++|+||+|.+|.+.+. ...... ..+++++++||||.||++|+|+||+++++++++.+.+...  .++++
T Consensus       192 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
T PRK08361        192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVA  271 (391)
T ss_pred             HHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCC
Confidence            55   3 999999999999875322 111111 2468999999999999999999999999999998876654  36788


Q ss_pred             HHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH-hCCcE
Q 014492          316 VAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       316 ~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~gI~  389 (423)
                      .+.|.++..+|++.   +++++.++.++++++.+.+.|++++++.+ .|.+++|+|+++++ +.++.++.+.|. ++||.
T Consensus       272 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~  351 (391)
T PRK08361        272 SFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVV  351 (391)
T ss_pred             hHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEE
Confidence            89999999999874   36888999999999999999998866654 45667889999984 568899999887 68999


Q ss_pred             EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.++..+  ..++++||+++..+  +++.+++++|
T Consensus       352 v~pg~~f~~~~~~~iRi~~~~~~--~~l~~al~~l  384 (391)
T PRK08361        352 VIPGTAFGKAGEGYIRISYATSK--EKLIEAMERM  384 (391)
T ss_pred             EcCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            9998763  33589999999753  5899888876

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-44  Score=355.55  Aligned_cols=325  Identities=21%  Similarity=0.293  Sum_probs=269.8

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC--CCCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL--KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~  164 (423)
                      .++++|+.|.++.+.++.+.+++.+.  ....+|+++ |.++||+++++++    |  ++++ +|++|+|+++++..++.
T Consensus        26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~  105 (387)
T PRK08912         26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL  105 (387)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence            45799999999888788888776652  223668664 7899999999986    4  5677 99999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      .++++||+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.+. .+++++++++||||||.+++.+++++|
T Consensus       106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~i  184 (387)
T PRK08912        106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELALL  184 (387)
T ss_pred             HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-ccceEEEEeCCCCCcCcccCHHHHHHH
Confidence            999999999999999999999999999999999975 468899999999886 689999999999999999999998887


Q ss_pred             HcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492          244 LEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~  313 (423)
                      ++.    ++++|+||+|.++.+++.   ...... ..+++++++||||.||++|+|+||+++++++++.+......  ++
T Consensus       185 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~  264 (387)
T PRK08912        185 AEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFT  264 (387)
T ss_pred             HHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccc
Confidence            764    999999999998876432   111222 24789999999999999999999999999999998876654  66


Q ss_pred             CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC---CCCHHHHHHHHH-hCCc
Q 014492          314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS---GMDAKKLKDDLA-KMGV  388 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~---~~~~~~l~~~L~-~~gI  388 (423)
                      .++..|.++..++.. .+|+++.+++++++++.+.+.|++.+.....+.+++|+|+++++   ..+..++++.|+ ++||
T Consensus       265 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV  344 (387)
T PRK08912        265 TPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGV  344 (387)
T ss_pred             CChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCE
Confidence            777788888777754 67889999999999999999999886332345677899999974   357888999886 6899


Q ss_pred             EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          389 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.++..+    ...+++||+++..  .+.+.+++++|
T Consensus       345 ~v~pg~~f~~~~~~~~~iRl~~~~~--~~~l~~~l~rl  380 (387)
T PRK08912        345 AAIPVSAFYEEDPVTSVVRFCFAKR--DATLDEAVERL  380 (387)
T ss_pred             EEecchhhCCCCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence            99987653    2368999999975  37899998886

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=1.9e-44  Score=351.80  Aligned_cols=324  Identities=23%  Similarity=0.328  Sum_probs=264.1

Q ss_pred             HHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh----C---CCCCcEEEeCCHH
Q 014492           85 VLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS----G---LESDHILVGCGAD  156 (423)
Q Consensus        85 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~----g---~~~~~i~~t~G~~  156 (423)
                      .++......+.++++|+.+++..+.++.+.+++.+.....+|+++ |.+++|+++++++    |   +++++|++|+|++
T Consensus        17 ~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~   96 (364)
T PRK07865         17 PAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSK   96 (364)
T ss_pred             HHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChH
Confidence            343333344567899999987777678888888764333578664 7899999999997    3   6689999999999


Q ss_pred             HHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          157 ELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       157 ~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      +++..++..+ +++||.|++++|+|+.|...++..|++++.++.       +++++    +.++++|++++||||||.++
T Consensus        97 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~----~~~~~~v~~~~p~NPtG~~~  165 (364)
T PRK07865         97 ELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------LTELG----PQRPALIWLNSPSNPTGRVL  165 (364)
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCC----cccceEEEEcCCCCCCCccC
Confidence            9999988888 799999999999999999999999999998852       23322    25789999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhc------cCCcEEEEccChhhhcccCccccccccCHHHHHHH
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l  305 (423)
                      +.+++++|++.    |++||+||+|.++.+++.......      ..+++++++||||.||++|+|+||+++++++++.+
T Consensus       166 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~  245 (364)
T PRK07865        166 GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAEL  245 (364)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHH
Confidence            99998888763    999999999998876442222111      34689999999999999999999999999999998


Q ss_pred             HHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHH
Q 014492          306 WRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDL  383 (423)
Q Consensus       306 ~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L  383 (423)
                      .....  .++++.+.|.++..+|++.+++++.++.++++++.+.+.|++.++....|.+++|+|++++  .+..++.+.|
T Consensus       246 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~l  323 (364)
T PRK07865        246 LEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAGFRVDHSEAGLYLWATRG--EDCWDTVAWL  323 (364)
T ss_pred             HHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCccEEEEEeCC--CCHHHHHHHH
Confidence            87653  4678999999999999988888999999999999999999987643334677889999884  4567888889


Q ss_pred             HhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          384 AKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       384 ~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      .++||.+.++..+.  .++++||+++..  .+++.+++++|+
T Consensus       324 ~~~gv~v~pg~~f~~~~~~~iRi~~~~~--~~~~~~~~~~l~  363 (364)
T PRK07865        324 AERGILVAPGDFYGPAGAQHVRVALTAT--DERIAAAVERLA  363 (364)
T ss_pred             HHCCEEEeCccccCcCCCCEEEEEecCC--HHHHHHHHHHhh
Confidence            99999999977532  468999999864  378999998874

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=2.9e-44  Score=353.13  Aligned_cols=326  Identities=22%  Similarity=0.333  Sum_probs=273.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----CC--CCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g~--~~~-~i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.|.+++++++.+.+++.+. . ....|+ ..|.+++|+++++++    |+  +++ +|++|+|+++++..++.
T Consensus        30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~  109 (386)
T PRK09082         30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAIL  109 (386)
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHH
Confidence            46799999999999889888888763 2 225685 457899999999864    55  343 89999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      .++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.+. .+++++++++||||||.+++.+++++|
T Consensus       110 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~i  188 (386)
T PRK09082        110 ALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-PRTRLIILNTPHNPSGTVWSAADMRAL  188 (386)
T ss_pred             HHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-ccceEEEEeCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999975 468899999999996 689999999999999999999998888


Q ss_pred             HcC----CCEEEEccCCccccCCCc---hhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492          244 LEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~  313 (423)
                      ++.    ++++|+||+|.++.+++.   ..... ...+++++++||||.||++|+|+||+++++++++.+.+...  .++
T Consensus       189 ~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~  268 (386)
T PRK09082        189 WQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFT  268 (386)
T ss_pred             HHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCC
Confidence            764    999999999998876432   11222 23578999999999999999999999999999999888763  478


Q ss_pred             CcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--CCCHHHHHHHHH-hCCcE
Q 014492          314 VSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       314 ~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--~~~~~~l~~~L~-~~gI~  389 (423)
                      ++.+.|.++..+++ .++++++.++.++++++.+.+.|++.+.....+.+++|+|+++++  +.+..++++.|. ++||.
T Consensus       269 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~  348 (386)
T PRK09082        269 VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVA  348 (386)
T ss_pred             CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEE
Confidence            89999999999997 678889999999999999999998865332345677899999973  567899999875 88999


Q ss_pred             EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          390 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       390 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      +.+++.+    ...+++||+++.+  .+.+.+++++|+
T Consensus       349 v~pg~~f~~~~~~~~~~Ri~~~~~--~~~l~~~~~rl~  384 (386)
T PRK09082        349 AIPLSVFYADPFPHRLVRLCFAKQ--EETLDAAAERLC  384 (386)
T ss_pred             EeCcHHhCCCCCCCCEEEEEecCC--HHHHHHHHHHHh
Confidence            9998753    2357999999974  478999998874

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-45  Score=341.37  Aligned_cols=321  Identities=26%  Similarity=0.378  Sum_probs=265.1

Q ss_pred             cCCCCCCCCCCHHHHHHHhcCC-C--CCCC-CCcchHHHHHHHHHHh----C---CCCCcEEEeCCHHHHHHHHHHHhcC
Q 014492          100 IDANENPYGPPPEVREALGQLK-F--PYIY-PDPESRRLRAALAKDS----G---LESDHILVGCGADELIDLIMRCVLD  168 (423)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~~-~--~~~Y-~~~g~~~lr~~ia~~~----g---~~~~~i~~t~G~~~al~~~~~~l~~  168 (423)
                      |++|.+++++|+-+.+++.++. .  .++| +..|.++|+++|++.+    |   ...++|++|.|+.+++..++..+++
T Consensus        36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~  115 (420)
T KOG0257|consen   36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN  115 (420)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence            9999999999999999998742 2  2455 6667777777777654    3   2456899999999999999999999


Q ss_pred             CCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--------CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      +||+|++.+|.|..|....+++|++++.|+..        .+|.+|++.++.++. +++|+|++|+||||||.++++++|
T Consensus       116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii~ntPhNPtGkvfsReeL  194 (420)
T KOG0257|consen  116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-EKTKAIILNTPHNPTGKVFSREEL  194 (420)
T ss_pred             CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-CCccEEEEeCCCCCcCcccCHHHH
Confidence            99999999999999999999999999999954        578999999999998 799999999999999999999999


Q ss_pred             HHHHcC----CCEEEEccCCccccCCCc-h---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492          241 LKILEM----PILVVLDEAYTEFSGLES-R---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (423)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~~-~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-  311 (423)
                      ++|+++    |+++|.||+|..+.+++. +   ....+.+++++.++|+||.||+.|||+||+++++.++..+....+. 
T Consensus       195 e~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~  274 (420)
T KOG0257|consen  195 ERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF  274 (420)
T ss_pred             HHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence            999886    999999999999987764 2   2234568999999999999999999999999999999988887765 


Q ss_pred             -CCCcHHHHHHHHHHhCCh---------HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC--------CC
Q 014492          312 -YNVSVAAEVAACAALQNP---------IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SG  373 (423)
Q Consensus       312 -~~~~~~~~~a~~~~l~~~---------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~--------~~  373 (423)
                       +.++.+.|.|..+++..+         .+..++.+.++++|+.|.+.|++++.-...|+++.|+|++++        ++
T Consensus       275 ~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~  354 (420)
T KOG0257|consen  275 VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEE  354 (420)
T ss_pred             ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchh
Confidence             577888888888777653         345569999999999999999999755567899999999997        11


Q ss_pred             C----CHHHHHHHHH-hCCcEEEeCCCCCCC-------CeEEEEecChhhHHHHHHHHhhhC
Q 014492          374 M----DAKKLKDDLA-KMGVMIRHYNNKELK-------GYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       374 ~----~~~~l~~~L~-~~gI~v~~~~~~~~~-------~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      .    +.-.+...|. +.|+.+.|.+.+..+       +.+|+++...+  +.|..++++|+
T Consensus       355 ~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~--~~L~~a~e~l~  414 (420)
T KOG0257|consen  355 ILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKAD--ETLRKAIERLK  414 (420)
T ss_pred             hccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhH--HHHHHHHHHHh
Confidence            1    2344567776 789999887764443       35666666543  66888877763

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=3.2e-44  Score=356.96  Aligned_cols=333  Identities=20%  Similarity=0.241  Sum_probs=262.1

Q ss_pred             HHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh----C--CCCCcEEEeCC
Q 014492           88 IQLGRKPEDIVKIDANEN---PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCG  154 (423)
Q Consensus        88 ~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G  154 (423)
                      ++....+.++++++.|++   ++.+|+.+.+++.+.   ....+| +..|.++||+++++++    |  +++++|++|+|
T Consensus        25 ~~~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G  104 (433)
T PRK06855         25 KKLEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNG  104 (433)
T ss_pred             HHHHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCc
Confidence            333344567899999988   678888888887763   122568 4568999999999997    3  57889999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH-HHCCCeEEEecCC--CCCCCCHHHHHHHhhc-CCceEEEEcCCCCC
Q 014492          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-EKPKCIFLTSPNNP  230 (423)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NP  230 (423)
                      +++++..++. ++++||.|++++|+|+.|.... ...|++++.+|.+  ++|.+|++++++.+.. .+++++++++||||
T Consensus       105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NP  183 (433)
T PRK06855        105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNP  183 (433)
T ss_pred             HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCC
Confidence            9999999986 8899999999999999887543 3469999999864  4678999999999863 46799999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-----
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-----  298 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-----  298 (423)
                      ||.+++.+++++|++.    +++||+||+|.++.+.+.   ....+....++|+++||||.|++||+|+||++++     
T Consensus       184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~  263 (433)
T PRK06855        184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD  263 (433)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence            9999999999998764    999999999999876432   2222222236799999999999999999999973     


Q ss_pred             H---HHHHHHHHhcC-CCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEe
Q 014492          299 L---SIIEYLWRAKQ-PYNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEV  370 (423)
Q Consensus       299 ~---~~~~~l~~~~~-~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~  370 (423)
                      +   .+++.+..... ..+.+.+.|.++..++++.   +|+++.++.++++++.+.+.|++++++. ..|.+|+|+|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l  343 (433)
T PRK06855        264 EVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVF  343 (433)
T ss_pred             hHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecc
Confidence            2   23343433322 2467889999999999873   6789999999999999999998875444 3577889999999


Q ss_pred             CCCC---------------------------CHHHHHHHH-HhCCcEEEeCCCCC-CCCeEEEEecChhhHHHHHHHHhh
Q 014492          371 TSGM---------------------------DAKKLKDDL-AKMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       371 ~~~~---------------------------~~~~l~~~L-~~~gI~v~~~~~~~-~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      |++.                           +..+++..| .++||.+.||..+. ...++||+++... .++|.+++++
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~-~~~i~~~~~~  422 (433)
T PRK06855        344 EDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERD-EEKFEWIYQT  422 (433)
T ss_pred             ccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCc-HHHHHHHHHH
Confidence            8542                           355667665 48899999998753 2347999999744 4889999988


Q ss_pred             h
Q 014492          422 L  422 (423)
Q Consensus       422 l  422 (423)
                      |
T Consensus       423 l  423 (433)
T PRK06855        423 L  423 (433)
T ss_pred             H
Confidence            6

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=1.3e-44  Score=364.41  Aligned_cols=328  Identities=18%  Similarity=0.251  Sum_probs=257.3

Q ss_pred             CCCCeeEcCCCCCC----------------CCC-------------CHHHHHHHhc----CC-CCCCCCCc-chHHHHHH
Q 014492           93 KPEDIVKIDANENP----------------YGP-------------PPEVREALGQ----LK-FPYIYPDP-ESRRLRAA  137 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----------------~~~-------------~~~v~~al~~----~~-~~~~Y~~~-g~~~lr~~  137 (423)
                      ++.++|+|+.|+++                +.+             |..+.+++.+    .. ....|++. |.++||++
T Consensus        44 ~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~a  123 (481)
T PTZ00377         44 PFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKA  123 (481)
T ss_pred             CcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHH
Confidence            45799999999995                554             3356666543    11 22558554 89999999


Q ss_pred             HHHHhC------CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHH
Q 014492          138 LAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE  208 (423)
Q Consensus       138 ia~~~g------~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~  208 (423)
                      ++++++      +++++|++|+|+++++.+++++++ ++||.|+++.|+|+.|...++..|++++.++++  ++|.+|++
T Consensus       124 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~  203 (481)
T PTZ00377        124 VAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQE  203 (481)
T ss_pred             HHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHH
Confidence            999973      578999999999999999999998 799999999999999999999999999999964  45789999


Q ss_pred             HHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC--chh---hh---hcc
Q 014492          209 LIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--SRM---EW---VKK  271 (423)
Q Consensus       209 ~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~~~---~~---~~~  271 (423)
                      ++++.+.+     .++|+++++|||||||.+++.+++++|++.    +++||+||+|.++.+++  ...   ..   +..
T Consensus       204 ~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~  283 (481)
T PTZ00377        204 ELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPA  283 (481)
T ss_pred             HHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcc
Confidence            99999863     179999999999999999999988888764    99999999999987632  111   11   111


Q ss_pred             ----CCcEEEEccChhh-hcccCcccccccc---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhCCh--------HHHH-
Q 014492          272 ----HDNLIVLRTFSKR-AGLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP--------IYLE-  333 (423)
Q Consensus       272 ----~~~~i~i~S~SK~-~g~~G~R~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~a~~~~l~~~--------~~~~-  333 (423)
                          ..++++++||||. ++++|+|+||+++   ++++++++.+.... ++.+.++|.++..++++.        .+.+ 
T Consensus       284 ~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~  363 (481)
T PTZ00377        284 EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRE  363 (481)
T ss_pred             cccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHH
Confidence                1268999999997 6999999999986   89999999887654 478999999999999641        2333 


Q ss_pred             --HHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC--CCC----------CHHHHHHHH-HhCCcEEEeCCCCC
Q 014492          334 --KVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--SGM----------DAKKLKDDL-AKMGVMIRHYNNKE  397 (423)
Q Consensus       334 --~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~--~~~----------~~~~l~~~L-~~~gI~v~~~~~~~  397 (423)
                        +.++.++++++.+.+.|++++++.+ .|++|+|+|++++  .+.          +...++..+ .++||.+.||+.++
T Consensus       364 ~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~  443 (481)
T PTZ00377        364 RDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG  443 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence              3344578999999999998866654 5678899997763  211          233454444 58899999988753


Q ss_pred             ---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          398 ---LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       398 ---~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                         .++++||+++..  .+++.+++++|
T Consensus       444 ~~~~~~~~Rls~~~~--~e~l~~~l~rl  469 (481)
T PTZ00377        444 QKPGTYHFRITILPP--EEQIEEMVKKI  469 (481)
T ss_pred             CCCCCCEEEEEECCC--HHHHHHHHHHH
Confidence               356999999944  36788888776

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=2.1e-44  Score=330.86  Aligned_cols=331  Identities=25%  Similarity=0.369  Sum_probs=277.7

Q ss_pred             HhCCCC--CCeeEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCCCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492           89 QLGRKP--EDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDS------GLESDHILVGCGADEL  158 (423)
Q Consensus        89 ~~~~~~--~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~Y~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a  158 (423)
                      +|...+  +|++.|...+++|+.+|+|++|+.+ +.++ ++|| .+.+++-+++++|+      .++++.|++++|...+
T Consensus        17 KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg   95 (388)
T COG1168          17 KWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG   95 (388)
T ss_pred             eccccCCCCCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence            344444  7899999999999999999999998 5554 7788 45567888888774      5688999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      +..+++.|.++||.|++..|.|+++....+..|.+++..|+   +..+.+|+++|++.+.++++|++++||||||||+++
T Consensus        96 i~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw  175 (388)
T COG1168          96 ISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW  175 (388)
T ss_pred             HHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence            99999999999999999999999999999999999999994   345677999999999878899999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCC-chhh--hhcc--CCcEEEEccChhhhcccCccccccccC-HHHHHHH
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRME--WVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYL  305 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~-~~~~--~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l  305 (423)
                      +.+||.+|++.    |++||+||+|+++.+.+ .+..  .++.  .++.+++.|.||+|+++|+++++++.+ ++..+++
T Consensus       176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~  255 (388)
T COG1168         176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKF  255 (388)
T ss_pred             cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHH
Confidence            99999988775    99999999999998755 3322  2222  588999999999999999999988874 4544444


Q ss_pred             HHh-c--CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCC-CCCHHH
Q 014492          306 WRA-K--QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKK  378 (423)
Q Consensus       306 ~~~-~--~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~-~~~~~~  378 (423)
                      .+. .  ...++|.++..|..++++. +.|++++.++++.|++++.+.|++ +|++.+. |++++.+|+++.+ +.+..+
T Consensus       256 ~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~  335 (388)
T COG1168         256 LKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSE  335 (388)
T ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCChHH
Confidence            432 2  2367899999999999988 579999999999999999999976 7888875 5555567999875 677789


Q ss_pred             HHHHHH-hCCcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          379 LKDDLA-KMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       379 l~~~L~-~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.+.|+ +.+|.+.+|..  ..+.|++|++++++.  ..|.+++++|
T Consensus       336 l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr--~~L~eal~ri  380 (388)
T COG1168         336 LAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPR--AILEEALERL  380 (388)
T ss_pred             HHHHHHHhhcEeccCCCccCcCCCceEEEecCCCH--HHHHHHHHHH
Confidence            999988 78999999887  455789999999876  5688888876

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=9.7e-44  Score=349.84  Aligned_cols=326  Identities=27%  Similarity=0.385  Sum_probs=267.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-CCcchHHHHHHHHHHh----CC--C-CCcEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-~~~g~~~lr~~ia~~~----g~--~-~~~i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.|++++++++.+.+++.+. . ....| |..|.+++|+++++++    |+  + +++|++|+|+++++.+++.
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~  109 (391)
T PRK07309         30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT  109 (391)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            46899999999999998888888763 2 22458 4557899999999987    33  3 4799999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      .++++||+|++++|+|..+...++..|++++.++.+. ++.+|++.+++.+.+  .+++++++++||||||.+++.++++
T Consensus       110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~  189 (391)
T PRK07309        110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIK  189 (391)
T ss_pred             HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHH
Confidence            9999999999999999999999999999999999643 568999999998863  3689999999999999999988888


Q ss_pred             HHHcC----CCEEEEccCCccccCCCc-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492          242 KILEM----PILVVLDEAYTEFSGLES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (423)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~  313 (423)
                      +|++.    ++++|+||+|.++.+++. ...... ..+++++++||||.||++|+|+||+++++++++.+......  .+
T Consensus       190 ~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~  269 (391)
T PRK07309        190 ALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTA  269 (391)
T ss_pred             HHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccC
Confidence            88764    999999999999886332 111111 34789999999999999999999999999999998876432  46


Q ss_pred             CcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC--CHHHHHHHHH-hCCcE
Q 014492          314 VSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM--DAKKLKDDLA-KMGVM  389 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~--~~~~l~~~L~-~~gI~  389 (423)
                      ++.++|.++..+|++. .+....++.++++++.+.+.|++.++....|.+++|+|+++|++.  ++.++++.|. ++||.
T Consensus       270 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~  349 (391)
T PRK07309        270 ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVA  349 (391)
T ss_pred             CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEE
Confidence            7889999999999874 445667888899999999999888633335677889999998543  5778887765 78999


Q ss_pred             EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.++..+  ..++++||+++..  .+++.+++++|
T Consensus       350 v~pg~~f~~~~~~~iRi~~~~~--~~~l~~~i~~l  382 (391)
T PRK07309        350 FIPGAAFGPYGEGYVRLSYAAS--METIKEAMKRL  382 (391)
T ss_pred             EeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            9998763  3468999999864  36788888776

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.7e-44  Score=349.68  Aligned_cols=326  Identities=24%  Similarity=0.335  Sum_probs=267.4

Q ss_pred             hHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh-------CCCCCcEEEeCC
Q 014492           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GLESDHILVGCG  154 (423)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~-------g~~~~~i~~t~G  154 (423)
                      +..++.+....+.++++|+.+++..++++.+.+++.+......|+++ |.++||+++++++       |+++++|++|+|
T Consensus         9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G   88 (357)
T TIGR03539         9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIG   88 (357)
T ss_pred             HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence            34445555556677899999988888788888888764334678765 7899999999997       477899999999


Q ss_pred             HHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       155 ~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      +++++..++..+ +++||.|++++|+|+.+...++..|++++.++       |++++    ...++++|++++|+||||.
T Consensus        89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l----~~~~~~~v~~~~p~NPtG~  157 (357)
T TIGR03539        89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTEL----DPVGPDLIWLNSPGNPTGR  157 (357)
T ss_pred             hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------Chhhc----CccCccEEEEeCCCCCcCc
Confidence            999999999887 79999999999999999999999999998875       22222    2257899999999999999


Q ss_pred             CCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhc------cCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~------~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      +++.+++++|++.    |+++|+||+|.++.+++.....+.      ..+++++++||||.||++|+|+||+++++++++
T Consensus       158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~  237 (357)
T TIGR03539       158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVA  237 (357)
T ss_pred             cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHH
Confidence            9999998887754    999999999998876543222221      246899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      .+.+...  .++++.++|.++..+|++..+++..++.++++++.+.+.|++.+.....|.+++|+|++++  .+..++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~--~~~~~~~~  315 (357)
T TIGR03539       238 ELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAGLYLWATRG--EDAWDTVD  315 (357)
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCccEEEEEECC--CCHHHHHH
Confidence            8877654  3678899999999999887888888999999999999999887533345677889999985  36778999


Q ss_pred             HHHhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          382 DLAKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      .|.++||.|.++..+  ..++++||+++..  .+++.+++++|.
T Consensus       316 ~l~~~gV~v~pg~~f~~~~~~~iRis~~~~--~~~i~~~~~~l~  357 (357)
T TIGR03539       316 RLAELGILVAPGDFYGPAGSQHVRVALTAT--DERIAAAVARLT  357 (357)
T ss_pred             HHHhCCEEECCccccCCCCCCeEEEEecCC--HHHHHHHHHhhC
Confidence            999999999998753  3468999999974  388999999874

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-43  Score=350.75  Aligned_cols=327  Identities=22%  Similarity=0.340  Sum_probs=273.1

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM  163 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g~--~~~~i~~t~G~~~al~~~~  163 (423)
                      .+.++++|+.|.+++++++.+.+++.+. . ...+|+++ |.++||+++++++    |+  ++++|++|+|+++++..++
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~  110 (402)
T PRK06107         31 AGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLAL  110 (402)
T ss_pred             ccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence            3457899999999999889888888763 2 23568654 7899999998875    54  6789999999999999999


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      .+++++||.|++++|+|..|...+...|++++.++.+  +++.+|++++++.+. .+++++++++|+||||.+++.++++
T Consensus       111 ~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~  189 (402)
T PRK06107        111 MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELR  189 (402)
T ss_pred             HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-cCceEEEEECCCCCCCcCcCHHHHH
Confidence            9999999999999999999998888899999888864  457799999999986 6899999999999999999999998


Q ss_pred             HHHc----C-CCEEEEccCCccccCCCch---hhhhc--cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-
Q 014492          242 KILE----M-PILVVLDEAYTEFSGLESR---MEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-  310 (423)
Q Consensus       242 ~i~~----~-~~~li~Deay~~~~~~~~~---~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-  310 (423)
                      +|++    . ++++|+||+|.++.+.+..   .....  ..+++++++||||.||++|+|+||+++++++++.+..... 
T Consensus       190 ~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~  269 (402)
T PRK06107        190 ALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQ  269 (402)
T ss_pred             HHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHh
Confidence            8875    3 7899999999987654321   12221  2468999999999999999999999999999999988775 


Q ss_pred             -CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC--------CC---CCH
Q 014492          311 -PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--------SG---MDA  376 (423)
Q Consensus       311 -~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~--------~~---~~~  376 (423)
                       .++++.++|.++..+|+. ..|+++.++.++++++.+.+.|++++++.+ .|.+|+|+|++++        .+   .+.
T Consensus       270 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~  349 (402)
T PRK06107        270 SSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETD  349 (402)
T ss_pred             cccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCH
Confidence             467899999999999974 578899999999999999999988755554 4678899999873        12   256


Q ss_pred             HHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          377 KKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       377 ~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.+.|. ++||.+++|..++..+++||+++.+  .+++.+++++|
T Consensus       350 ~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~--~e~l~~~l~~l  394 (402)
T PRK06107        350 QDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATS--LETLEEACARI  394 (402)
T ss_pred             HHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence            77777665 7899999998877789999999974  47899988876

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=9.8e-44  Score=351.42  Aligned_cols=332  Identities=21%  Similarity=0.307  Sum_probs=259.5

Q ss_pred             HHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHH
Q 014492           88 IQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGAD  156 (423)
Q Consensus        88 ~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~  156 (423)
                      .+....+.++++|+.|.+   ++++++.+.+++.+ ......|+++ |.++||+++++++      ++++++|++|+|++
T Consensus        26 ~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~  105 (404)
T PRK09265         26 KRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVS  105 (404)
T ss_pred             HHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChH
Confidence            333334567899999755   45688888888765 3334678765 6789999999998      68899999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      +++..+++.++++||+|++++|+|..+...++..|++++.++.+  +++.+|++++++.+. .++++|+++|||||||.+
T Consensus       106 ~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~  184 (404)
T PRK09265        106 ELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAV  184 (404)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCcC
Confidence            99999999999999999999999999999999999999998854  357799999999986 689999999999999999


Q ss_pred             CCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCcccccccc--CHH----H
Q 014492          235 INDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLS----I  301 (423)
Q Consensus       235 ~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~----~  301 (423)
                      ++.+++++|++.    |++||+||+|.++.+++.   .........++++++||||.||++|+|+||+++  +++    +
T Consensus       185 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~  264 (404)
T PRK09265        185 YSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGY  264 (404)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHH
Confidence            997777777653    899999999999876432   222222334689999999999999999999995  443    4


Q ss_pred             HHHHHHhc-CCCCCcHHHHHHHHHHhCChHHHHH---HHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCC--
Q 014492          302 IEYLWRAK-QPYNVSVAAEVAACAALQNPIYLEK---VKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGM--  374 (423)
Q Consensus       302 ~~~l~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~--  374 (423)
                      ++.+.... ..+++|.++|.++..+|.+.++.++   ..++++++++.+.+.|++++++. ..|++|+|+|++++...  
T Consensus       265 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~  344 (404)
T PRK09265        265 IEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYP  344 (404)
T ss_pred             HHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccC
Confidence            44443332 2367889999999999976443332   23467788999999998875554 45788999999997432  


Q ss_pred             --CH-HHHHHHHHhCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          375 --DA-KKLKDDLAKMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       375 --~~-~~l~~~L~~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                        +. +.+.+.|.++||.+.++..+  ..++++||+++..  .+++.+++++|
T Consensus       345 ~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~--~e~l~~~l~rl  395 (404)
T PRK09265        345 IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPR--VDDLEEAIGRI  395 (404)
T ss_pred             CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCC--HHHHHHHHHHH
Confidence              33 44666677999999998764  3468999999743  36788888776

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=1.1e-43  Score=349.11  Aligned_cols=325  Identities=24%  Similarity=0.373  Sum_probs=270.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~  164 (423)
                      +++++|+.+.+.+++++.+.+++.+. . ....|+ ..|..+||+++++++    |  ++++ +|++|+|+++++.++++
T Consensus        28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~  107 (387)
T PRK07683         28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR  107 (387)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence            46799999998888888888888773 2 235684 568899999999997    4  4677 99999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      .++++||.|+++.|+|..|...++..|++++.++.+ +++.+|.+++++.+. .+++++++++||||||.+++.+++++|
T Consensus       108 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~i~i~~p~NPtG~~~s~~~~~~l  186 (387)
T PRK07683        108 TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDI  186 (387)
T ss_pred             HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-cCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence            999999999999999999999999999999999965 467789999999986 689999999999999999999988888


Q ss_pred             HcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCC
Q 014492          244 LEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV  314 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~  314 (423)
                      ++.    |+++|+||+|.++.+++..  .... +..+++++++||||.||+||+|+||+++++++++++.+....  .++
T Consensus       187 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~  266 (387)
T PRK07683        187 ADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCA  266 (387)
T ss_pred             HHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCC
Confidence            764    8999999999998764322  1222 235689999999999999999999999999999988866432  346


Q ss_pred             cHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHH-HhCCcEEE
Q 014492          315 SVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL-AKMGVMIR  391 (423)
Q Consensus       315 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L-~~~gI~v~  391 (423)
                      +.++|.++..+|.+ ..++++.+++++++++.+.+.|++.+.....|++++|+|+.++. +.++.++...+ .++||.+.
T Consensus       267 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~  346 (387)
T PRK07683        267 SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVV  346 (387)
T ss_pred             ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc
Confidence            77899999999976 46788889999999999999998875333456778899998874 56777888765 58899999


Q ss_pred             eCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          392 HYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       392 ~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++..+  ..++++||+++..  .+++.+++++|
T Consensus       347 pg~~f~~~~~~~~Ri~~~~~--~~~~~~al~~l  377 (387)
T PRK07683        347 PGSAFSEYGEGYVRLSYAYS--IETLKEGLDRL  377 (387)
T ss_pred             CchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            98763  3368999999974  47899998886

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=9.1e-44  Score=351.09  Aligned_cols=330  Identities=25%  Similarity=0.377  Sum_probs=267.8

Q ss_pred             hCCCCCCeeEcCCCCC---CCCCCHHHHHHHhcC-C-CCCCCC-CcchHHHHHHHHHHh----C--CCCCcEEEeCCHHH
Q 014492           90 LGRKPEDIVKIDANEN---PYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADE  157 (423)
Q Consensus        90 ~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~-~-~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~  157 (423)
                      .+..+.++|+|+.|.+   ++++++.+.+++.+. . ....|+ +.|..+||+++++++    |  +++++|++|+|+++
T Consensus        25 ~~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~  104 (398)
T PRK08363         25 LEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE  104 (398)
T ss_pred             HHhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence            3445678999999998   788899999888763 2 224684 568999999999997    3  67899999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEe-cCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV-PRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.+++.+++++||.|+++.|+|..+...++..|++++.+ +.+ +++.+|++++++.+. .++++++++|||||||.++
T Consensus       105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~  183 (398)
T PRK08363        105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-EKTKAIAVINPNNPTGALY  183 (398)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-cceEEEEEECCCCCCCcCc
Confidence            9999999999999999999999999999999999999988 443 456799999999986 6889999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccccc--CHHHHHHHHH
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWR  307 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~~~~~l~~  307 (423)
                      +.+++++|++.    |+++|+||+|.++.+.+..  ...+....++++++||||.|+++|+|+||+++  ++++++.+..
T Consensus       184 ~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~  263 (398)
T PRK08363        184 EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVRE  263 (398)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHH
Confidence            98887777653    8999999999988764422  23333456899999999999999999999997  7776666543


Q ss_pred             hc-----CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCCC--CCHHH
Q 014492          308 AK-----QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSG--MDAKK  378 (423)
Q Consensus       308 ~~-----~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~~--~~~~~  378 (423)
                      ..     ..++.+.++|.++..+|.+ .+|+++.+++++++++.+.+.|++++++.+. |.+++|+|+++++.  .+..+
T Consensus       264 ~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~  343 (398)
T PRK08363        264 AIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKE  343 (398)
T ss_pred             HHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHH
Confidence            32     2367899999999999975 6789999999999999999999988655554 56777888888752  35566


Q ss_pred             HHHH-HHhCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          379 LKDD-LAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       379 l~~~-L~~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.. |.++||.++++..+.  .++|+||+++..  .+++.+++++|
T Consensus       344 ~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  388 (398)
T PRK08363        344 FVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPP--VEILEEAMDRF  388 (398)
T ss_pred             HHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            6555 568999999987643  357999999754  36788888776

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=1.2e-43  Score=350.55  Aligned_cols=327  Identities=23%  Similarity=0.334  Sum_probs=270.1

Q ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHHHhc-CC--CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~a  158 (423)
                      ++.++++|+.+++.    +++++++.+++.+ +.  ....| +..|..++|++++++++      +++++|++|+|++++
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a  108 (403)
T TIGR01265        29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA  108 (403)
T ss_pred             cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence            35788999999864    6788889888876 22  22468 55688999999999986      367899999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      +.+++++++++||+|+++.|+|..+...++..|++++.++.+  +++.+|++++++.+. .+++++++++||||||.+++
T Consensus       109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~  187 (403)
T TIGR01265       109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD-EKTVAIVVINPSNPCGSVFS  187 (403)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC-cCccEEEEecCCCCCCCCCC
Confidence            999999999999999999999999999999999999998853  467899999999886 67999999999999999999


Q ss_pred             HHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC--HH-----HH
Q 014492          237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--LS-----II  302 (423)
Q Consensus       237 ~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~--~~-----~~  302 (423)
                      .+++++|++.    |+++|+||+|.+|.+++.   ....+....++++++||||.|+++|+|+||++++  ++     ++
T Consensus       188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~  267 (403)
T TIGR01265       188 RDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVL  267 (403)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHH
Confidence            8887777653    999999999999986542   2223334457999999999999999999999983  22     44


Q ss_pred             HHHHHhcC-CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCC-----
Q 014492          303 EYLWRAKQ-PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSG-----  373 (423)
Q Consensus       303 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~-----  373 (423)
                      +.+..... .++++.++|.++..+|++  ..++++.+++++++++.+.+.|+.++++. ..|++|+|+|++++++     
T Consensus       268 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~  347 (403)
T TIGR01265       268 QGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEI  347 (403)
T ss_pred             HHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCC
Confidence            44544443 367889999999999975  57889999999999999999999885555 4688999999999743     


Q ss_pred             CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+..++++.|. ++||.+.++..++.++++||+++..+  +.|.+++++|
T Consensus       348 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~--~~l~~~l~~l  395 (403)
T TIGR01265       348 KDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPE--SMLEEACSRI  395 (403)
T ss_pred             CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            26788988865 88999999987767899999999753  6799999886

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=2.4e-44  Score=355.41  Aligned_cols=320  Identities=21%  Similarity=0.313  Sum_probs=257.0

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C------CCCCC-CCcchHHHHHHHHHHh---CCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIY-PDPESRRLRAALAKDS---GLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~Y-~~~g~~~lr~~ia~~~---g~~~~~i~~t~G~~~al~~~  162 (423)
                      +.++++|+.|++++++++.+.+++.+. .      ....| |+.|.++||+++++++   ++++++|++|+|+++++..+
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l  111 (402)
T TIGR03542        32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL  111 (402)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH
Confidence            467899999999999999888877652 1      12457 6678999999999986   78899999999999999987


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCC-----------eEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-----------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNN  229 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (423)
                      . .++.+||+|++++|+|..|...++..|+           +++.+|.+.  ++..|++.      ..++++|++|||||
T Consensus       112 ~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~i~l~nP~N  184 (402)
T TIGR03542       112 Q-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------EPKIDIIYLCSPNN  184 (402)
T ss_pred             H-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------cCCceEEEEeCCCC
Confidence            5 4678999999999999999999999999           999998643  34444321      25789999999999


Q ss_pred             CcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHH
Q 014492          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       230 PtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      |||.+++.+++++|++.    +++||+||+|.+|.+++.   .....+. .+++++++||||.||++|+|+||+++++++
T Consensus       185 PTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l  264 (402)
T TIGR03542       185 PTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKEL  264 (402)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHH
Confidence            99999999998888764    899999999999886542   1222222 367899999999999999999999999887


Q ss_pred             H--------HHHHH-hcCC-CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEE
Q 014492          302 I--------EYLWR-AKQP-YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILC  368 (423)
Q Consensus       302 ~--------~~l~~-~~~~-~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~  368 (423)
                      +        +.+.+ .... .+++.++|.++..++.+.  .+..+.++.++++++.+.+.|++.+ +.+. +.+++|+|+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~f~~v  343 (402)
T TIGR03542       265 TYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEHAPYLWV  343 (402)
T ss_pred             hhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCceeEEEE
Confidence            6        22222 1222 368889999998988764  3466777889999999999998875 4444 468999999


Q ss_pred             EeCCCCCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          369 EVTSGMDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       369 ~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      ++++..++.++++.|. ++||.+++++.++  .++|+||+++..  .+++.+++++|+
T Consensus       344 ~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~--~~~l~~~l~~l~  399 (402)
T TIGR03542       344 KTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGK--RENIVEACERIK  399 (402)
T ss_pred             ECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCC--HHHHHHHHHHHH
Confidence            9987778889999987 6799999987643  368999998663  377999998873

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=4.2e-44  Score=355.64  Aligned_cols=328  Identities=21%  Similarity=0.276  Sum_probs=262.1

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-------------CCCCCCCc-chHHHHHHHHHHhC--------CCCCcE
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHI  149 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~Y~~~-g~~~lr~~ia~~~g--------~~~~~i  149 (423)
                      .+..+|+|+..||.+- ..++.+.+.+. .             ....|.+. |.++||+++|++++        +++++|
T Consensus        45 np~g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I  123 (447)
T PLN02607         45 NPSGVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI  123 (447)
T ss_pred             CCCceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence            3456899999999773 35555555441 0             11236444 78999999999873        688999


Q ss_pred             EEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecCC--CCCCCCHHHHHHHhhc-----CCceE
Q 014492          150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKC  221 (423)
Q Consensus       150 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~  221 (423)
                      ++|+|+++++.+++.++++|||.|+++.|+|+.|...++ ..|++++.|+.+  ++|.+|++++++++.+     .++|+
T Consensus       124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~  203 (447)
T PLN02607        124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG  203 (447)
T ss_pred             EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence            999999999999999999999999999999999988776 479999999964  4577999999998863     47899


Q ss_pred             EEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc----hhhhh------ccCCcEEEEccChhhhcc
Q 014492          222 IFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWV------KKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       222 i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~----~~~~~------~~~~~~i~i~S~SK~~g~  287 (423)
                      |+++|||||||.+++.+++++|+++    ++++|+||+|.++.++..    .....      +..+++++++||||.||+
T Consensus       204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~  283 (447)
T PLN02607        204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL  283 (447)
T ss_pred             EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence            9999999999999999999988775    999999999998765431    11111      114689999999999999


Q ss_pred             cCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492          288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYPSY  362 (423)
Q Consensus       288 ~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~  362 (423)
                      +|+|+||+++ ++++++.+........+|.++|.++..+|++++    ++++.+++++++++.+.+.|++.+.....+.+
T Consensus       284 ~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~a  363 (447)
T PLN02607        284 PGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNA  363 (447)
T ss_pred             CcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCe
Confidence            9999999998 677777777665555689999999999999854    45677888999999999999987533345678


Q ss_pred             ceEEEEEeCCCC------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          363 SNFILCEVTSGM------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~~~~~~~~~~~~------~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |+|+|+++++..      ...++++.|. ++||.+.||..+  ..++|+||+|+..++ +.|.+++++|
T Consensus       364 g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~-~~l~~gl~Ri  431 (447)
T PLN02607        364 GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSE-DTLEVALKRI  431 (447)
T ss_pred             eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCH-HHHHHHHHHH
Confidence            999999997421      2346777776 579999998764  347999999997432 7799998887

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.9e-43  Score=346.78  Aligned_cols=325  Identities=25%  Similarity=0.337  Sum_probs=268.2

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-cchHHHHHHHHHHh-----CCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-PESRRLRAALAKDS-----GLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~-~g~~~lr~~ia~~~-----g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      +.++++|+.|++++++++.+.+++.+. .....|++ .|.+++|+++++++     ++++++|++|+|+++++.+++..+
T Consensus        29 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l  108 (397)
T PRK07568         29 GIKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI  108 (397)
T ss_pred             CCCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh
Confidence            356899999999999899999998763 23356754 57999999999997     478899999999999999999999


Q ss_pred             cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCC-CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFS-LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~-~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +++||+|++++|+|..+...++..|++++.++.+  +++. .|++++++.+. +++++|++++|+||||.+++.+++++|
T Consensus       109 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i  187 (397)
T PRK07568        109 CDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEML  187 (397)
T ss_pred             cCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-ccceEEEEECCCCCCCccCCHHHHHHH
Confidence            9999999999999999998889999999999974  3344 36899999886 689999999999999999999888887


Q ss_pred             HcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcC-CCC
Q 014492          244 LEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ-PYN  313 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~-~~~  313 (423)
                      ++.    ++++|+||+|.+|.+.+.   ....+. ..+++++++||||.||++|+|+||++++ +++++.+.+... .++
T Consensus       188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~  267 (397)
T PRK07568        188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLS  267 (397)
T ss_pred             HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCC
Confidence            764    999999999999876432   122222 2678999999999999999999999985 688887765544 378


Q ss_pred             CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHh------
Q 014492          314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAK------  385 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~------  385 (423)
                      .+.+.|.++..++++ ++++++.++.++++++.+.+.|++++++.+ .|.+++|+|++++. .+..++.+.|.+      
T Consensus       268 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~-~~~~~~~~~l~~~~~~~~  346 (397)
T PRK07568        268 PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPV-DDAEDFAKWLLTDFNYNG  346 (397)
T ss_pred             CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCC-CCHHHHHHHHHhhccccc
Confidence            899999999999975 578899999999999999999998865553 46778899999974 367889888864      


Q ss_pred             CCcEEEeCCCC----C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNK----E-LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~----~-~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +||.+.++..+    . .++++||+++..+  +++.+++++|
T Consensus       347 ~gv~v~pg~~f~~~~~~~~~~iRls~~~~~--~~~~~~~~~l  386 (397)
T PRK07568        347 ETVMVAPASGFYATPGLGKNEIRIAYVLNE--EDLKRAMEIL  386 (397)
T ss_pred             ceEEEeCchHhcCCCCCCCCeEEEEEeCCH--HHHHHHHHHH
Confidence            69999987653    2 2479999998542  7788887766

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.1e-43  Score=345.54  Aligned_cols=328  Identities=26%  Similarity=0.393  Sum_probs=272.9

Q ss_pred             CCCCCeeEcCCCCCCCCCCHHHHHHHhcC--CCCCCCC-CcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDANENPYGPPPEVREALGQL--KFPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y~-~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+.++++|+.+++++++++++.+++.+.  .....|+ ..|..+||+++++++      ++++++|++|+|+++++..+
T Consensus        28 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~  107 (393)
T PRK05764         28 AQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNA  107 (393)
T ss_pred             hccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHH
Confidence            33467899999999999889998888762  2234584 457899999999997      46788999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      +.+++++||.|++++|+|..+...++.+|++++.++.+  .++.+|++++++.+. ++++++++++|+||||.+++.+++
T Consensus       108 ~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~~  186 (393)
T PRK05764        108 FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT-PKTKALILNSPSNPTGAVYSPEEL  186 (393)
T ss_pred             HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-ccceEEEEECCCCCCCcccCHHHH
Confidence            99999999999999999999999999999999999975  357899999999986 689999999999999999998888


Q ss_pred             HHHHcC----CCEEEEccCCccccCCCc---hhhhh--ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          241 LKILEM----PILVVLDEAYTEFSGLES---RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~~---~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      ++|++.    ++++|+||+|.++.+++.   ....+  +..+++++++||||.+|++|+|+||+++++++++.+......
T Consensus       187 ~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~  266 (393)
T PRK05764        187 EAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSH  266 (393)
T ss_pred             HHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhh
Confidence            877664    999999999998876432   22222  235789999999999999999999999999999998877653


Q ss_pred             --CCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCC-----CHHHHHHH
Q 014492          312 --YNVSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----DAKKLKDD  382 (423)
Q Consensus       312 --~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~-----~~~~l~~~  382 (423)
                        ++++.++|.++..+|+ ..+++++.+++++++++.+.+.|++++++.+ .|.+++|+|++++.+.     ++.++.+.
T Consensus       267 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  346 (393)
T PRK05764        267 STSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEA  346 (393)
T ss_pred             cccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccccccCCHHHHHHH
Confidence              5788999999999997 4678888999999999999999998844553 4666789999987543     35788888


Q ss_pred             HH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          383 LA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       383 L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |. ++||.++++..+..++++||+++..  .+++.+++++|
T Consensus       347 l~~~~gi~v~~g~~f~~~~~vRis~~~~--~~~~~~~i~~l  385 (393)
T PRK05764        347 LLEEAGVAVVPGIAFGAPGYVRLSYATS--LEDLEEGLERI  385 (393)
T ss_pred             HHHhCCEEEccccccCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            76 6899999987765689999999864  36777777765

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=5.3e-43  Score=334.08  Aligned_cols=298  Identities=29%  Similarity=0.430  Sum_probs=244.4

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd  171 (423)
                      ...++|+|+.|+|+++ ++.+.+++.+. ....+||.  ...+|+++++++|   ++|++|+|+++++.+++. ++.+||
T Consensus         6 ~~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~-~~~~gd   78 (311)
T PRK08354          6 REEGLIDFSASVNPYP-PEWLDEMFERAKEISGRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGI-LALRDR   78 (311)
T ss_pred             CccceeEecCCCCCCC-CHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHH-hhCCCC
Confidence            3467899999999996 57888888763 22356775  5789999999998   479999999999998886 445899


Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~  247 (423)
                      .|+++.|+|..|...++..|++++.++      +|++.+++.++  +++++++||||||||.+++.+++++|++.    |
T Consensus        79 ~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~--~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~  150 (311)
T PRK08354         79 KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVE--RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN  150 (311)
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhc--CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence            999999999999999999999998764      57889988875  56789999999999999999999999874    8


Q ss_pred             CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (423)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~  327 (423)
                      +++|+||+|.+|.+++..   . ..+++++++||||.||++|+|+||+++   ..+.+.+...++..+..++.++..+++
T Consensus       151 ~~li~De~y~~f~~~~~~---~-~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~  223 (311)
T PRK08354        151 ALLILDEAFIDFVKKPES---P-EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIE  223 (311)
T ss_pred             cEEEEeCcchhccccccc---c-CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHH
Confidence            999999999999875421   1 367899999999999999999999998   566777777778888888888887777


Q ss_pred             Ch-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe
Q 014492          328 NP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV  406 (423)
Q Consensus       328 ~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~  406 (423)
                      +. +++.+.++.+++.++++.+.+.       .++.++|++++++   ++.++++.|.++||.++++..++.++|+||++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~l~~~l~-------~~~~~~~~~~~~~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~  293 (311)
T PRK08354        224 DDFEHLRKTMPLIWREKERFEKALY-------VKSDANFFIKDVG---DAEKFVEFLKRNGILVRDCTSFGLPGYIRFSV  293 (311)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcC-------CCCCCcEEEEECC---CHHHHHHHHHHCCeEEEecccCCCCCeEEEEe
Confidence            53 4455555556666655544441       2566777777764   57889999999999999998776679999999


Q ss_pred             cChhhHHHHHHHHhhh
Q 014492          407 GKPEHTDALMECLMHL  422 (423)
Q Consensus       407 ~~~~~~~~l~~al~~l  422 (423)
                      +.++++++|.++++.+
T Consensus       294 ~~~~~~~~l~~al~~~  309 (311)
T PRK08354        294 RDREENEKLIRALREW  309 (311)
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9988889999999876

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=7.9e-43  Score=343.94  Aligned_cols=327  Identities=23%  Similarity=0.307  Sum_probs=266.0

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~  161 (423)
                      .+.++++|+.+.++..+++.+.+++.+ .  .....|+++ |.++||+++++++    |  ++++ +|++|+|+++++..
T Consensus        27 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~  106 (395)
T PRK08175         27 RGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAH  106 (395)
T ss_pred             cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHH
Confidence            346789999998887777767766654 2  223678654 7899999999986    4  4566 89999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      ++..+++|||+|++++|+|+.+...++..|++++.++.+++ +.+++++++.++.  .++++|++++||||||.+++.++
T Consensus       107 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~  185 (395)
T PRK08175        107 LMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG-VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEF  185 (395)
T ss_pred             HHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC-CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHH
Confidence            99999999999999999999998888899999999997644 3458888887763  47899999999999999999988


Q ss_pred             HHHHHcC----CCEEEEccCCccccCCCch---hhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-
Q 014492          240 LLKILEM----PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-  310 (423)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-  310 (423)
                      +++|++.    |+++|+||+|.++.+++..   ...+. ..+++++++||||.||++|+|+||+++++++++++.+... 
T Consensus       186 ~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~  265 (395)
T PRK08175        186 FEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSY  265 (395)
T ss_pred             HHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhh
Confidence            8887764    9999999999988764321   11122 2467889999999999999999999999999999887664 


Q ss_pred             -CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC---CHHHHHHHHH-
Q 014492          311 -PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKLKDDLA-  384 (423)
Q Consensus       311 -~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~---~~~~l~~~L~-  384 (423)
                       .++.+.+.|.++..++.+ ..+++++++.++++++.+.+.|+++++....|.+|+|+|+++++..   ++.++++.|. 
T Consensus       266 ~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~  345 (395)
T PRK08175        266 HDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLN  345 (395)
T ss_pred             cccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHH
Confidence             456778888888888875 5678899999999999999999988643345778999999998643   4788988776 


Q ss_pred             hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          385 KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       385 ~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++||.|.++..+  ..++++||+++.  +.+.+.+++++|
T Consensus       346 ~~gv~v~p~~~f~~~~~~~lRis~~~--~~~~~~~al~~l  383 (395)
T PRK08175        346 EAKVCVSPGIGFGDYGDTHVRFALIE--NRDRIRQAIRGI  383 (395)
T ss_pred             hCCEEEeCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHH
Confidence            789999998653  335799999984  348899998876

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-42  Score=341.20  Aligned_cols=324  Identities=27%  Similarity=0.433  Sum_probs=268.1

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG  170 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g  170 (423)
                      .++|+|+.+++++++++.+.+++.+. .  ....|+++ |.+++|+++++++|+++++|++|+|+++++..+++.++.+|
T Consensus        28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~g  107 (380)
T PRK06225         28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPG  107 (380)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Confidence            56899999999999999999998763 2  12457655 78999999999999999999999999999999999999999


Q ss_pred             CeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-
Q 014492          171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-  246 (423)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-  246 (423)
                      |.|++++|+|..+...++..|++++.++.+   +++.+|++.+++.+. .+++++++++|+||||.+++.+++++|++. 
T Consensus       108 d~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a  186 (380)
T PRK06225        108 DNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIA  186 (380)
T ss_pred             CEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-CCceEEEEeCCCCCCCcCCCHHHHHHHHHHH
Confidence            999999999999988889999999999853   256899999999987 689999999999999999998888888764 


Q ss_pred             ---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-CCCCcHHHHHHH
Q 014492          247 ---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNVSVAAEVAA  322 (423)
Q Consensus       247 ---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-~~~~~~~~~~a~  322 (423)
                         |+++|+||+|.+|..+....... ..++++++.||||.+|++|+|+||+++++++++.+..... .++.+.++|.++
T Consensus       187 ~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~a  265 (380)
T PRK06225        187 RDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEAA  265 (380)
T ss_pred             HHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhcccCCCHHHHHHH
Confidence               99999999998876433222222 3478999999999999999999999999999998877643 577888999988


Q ss_pred             HHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCC--eecCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCC--
Q 014492          323 CAALQN-PIYLEKVKEALIKERERLFKLLKDVPFL--NPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNK--  396 (423)
Q Consensus       323 ~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~--  396 (423)
                      ..++.. .+|.++.++.++++++.+.+.|++++..  ...|.+++|+|++++. +.+..++.+.|.++||.++++..+  
T Consensus       266 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~  345 (380)
T PRK06225        266 IAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSK  345 (380)
T ss_pred             HHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCc
Confidence            888865 5677888888888888899999886443  2457889999999964 568899999999999999987542  


Q ss_pred             -CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          397 -ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       397 -~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       .+++++|++++..+  +++.+++++|
T Consensus       346 ~~~~~~iR~s~~~~~--e~l~~~~~~l  370 (380)
T PRK06225        346 RFGDRYIRVSFSIPR--EQVEVFCEEF  370 (380)
T ss_pred             CCCCceEEEEeCCCH--HHHHHHHHHH
Confidence             23579999998642  4455444443

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=7.6e-43  Score=347.45  Aligned_cols=325  Identities=26%  Similarity=0.395  Sum_probs=273.9

Q ss_pred             CCeeEcCCCCCCCC--CCHHHHHHHhcC----CC--CCCCCC-cchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHH
Q 014492           95 EDIVKIDANENPYG--PPPEVREALGQL----KF--PYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELI  159 (423)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~~----~~--~~~Y~~-~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al  159 (423)
                      .+.++|+.+.++..  +.....+++.+.    ..  ...|.. .|..+||+++++++    |  +++++|++|+|+++++
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al  168 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL  168 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence            56789988765443  223444444331    11  245644 68999999999987    3  4678999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDE  238 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~  238 (423)
                      +++.+.+++|||+|++++|+|......++..|++++.||.|+ .++|+|+|++.+.+.++|++|++ +.|||||.++|.+
T Consensus       169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~-~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~  247 (459)
T COG1167         169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE-DGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLE  247 (459)
T ss_pred             HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC-CCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHH
Confidence            999999999999999999999999999999999999999974 59999999999987789999998 8899999999999


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCch---hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      +.++|++.    +++||+||.|++|.+++..   ....+..+++++++||||.+. ||+|+||+++|+++++++...+..
T Consensus       248 rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~  326 (459)
T COG1167         248 RRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQA  326 (459)
T ss_pred             HHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHH
Confidence            99988875    9999999999999976543   355666899999999999986 999999999999999999877654


Q ss_pred             --CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC--CCe-ecCCCceEEEEEeCCCCCHHHHHHHH
Q 014492          312 --YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP--FLN-PYPSYSNFILCEVTSGMDAKKLKDDL  383 (423)
Q Consensus       312 --~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L  383 (423)
                        ...+.+.|.++...+.+   ..+++++++.++++++.+.+.|++..  ... ..|.+|+|+|+++|++.++.++.+.+
T Consensus       327 ~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a  406 (459)
T COG1167         327 ADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAA  406 (459)
T ss_pred             hcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCCHHHHHHHH
Confidence              67889999988888886   36788999999999999999998864  233 36888999999999999999999999


Q ss_pred             HhCCcEEEe-CCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          384 AKMGVMIRH-YNNKE----LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~~~gI~v~~-~~~~~----~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++||.+.+ +..+.    ..+++||+++...+ +++.+++++|
T Consensus       407 ~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~-e~i~~gi~~l  449 (459)
T COG1167         407 LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSE-EEIEEGIKRL  449 (459)
T ss_pred             HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCH-HHHHHHHHHH
Confidence            999999998 54422    35599999998764 8888888875

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=1.2e-43  Score=346.35  Aligned_cols=325  Identities=31%  Similarity=0.525  Sum_probs=274.0

Q ss_pred             CeeEcCCCCCCCC----CCHHHHHHHhc----CCCCCCCCCc-chHHHHHHHHHHhC------CCCC-cEEEeCCHHHHH
Q 014492           96 DIVKIDANENPYG----PPPEVREALGQ----LKFPYIYPDP-ESRRLRAALAKDSG------LESD-HILVGCGADELI  159 (423)
Q Consensus        96 ~~i~l~~~~~~~~----~~~~v~~al~~----~~~~~~Y~~~-g~~~lr~~ia~~~g------~~~~-~i~~t~G~~~al  159 (423)
                      ++|+|+.|+++..    +++++.+++.+    ......|+++ |.++||++++++++      ++++ +|++++|+.+++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            5799999999887    55566665543    2334678665 69999999999997      7788 999999999999


Q ss_pred             HHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCc
Q 014492          160 DLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE-----KPKCIFLTSPNNPD  231 (423)
Q Consensus       160 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPt  231 (423)
                      ..++..+ .++||+|+++.|+|+.|...++..|++++.+|.  +.++.+|++++++.+++.     +++++++++|||||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999988 789999999999999999999999999999994  467899999999999742     57899999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch----hhhhccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      |.+++.+++++|++.    +++||+||+|.++.++...    ...+....++++++|+||.||++|+|+||+++++++++
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~  241 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE  241 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhh
Confidence            999999999999553    9999999999999876432    34455666799999999999999999999999999999


Q ss_pred             HHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492          304 YLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       304 ~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l  379 (423)
                      .+.+....+..+.+.+.++..++.+..    ++++.+++++++++++.+.|++.++....+.+++|+|+.++.. ++.++
T Consensus       242 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l  320 (363)
T PF00155_consen  242 RLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPPEAGFFLWVRLDPN-DAEEL  320 (363)
T ss_dssp             HHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSBSSEEEEEESHH-HHHHH
T ss_pred             hhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeeccCccEEEEEcccc-hHHHH
Confidence            999888877779999999998888754    8899999999999999999998864444566889999988633 67899


Q ss_pred             HHHHHhC-CcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          380 KDDLAKM-GVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~~~-gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++|.++ ||.+.++..+..++++||+++..+ .+++++++++|
T Consensus       321 ~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~-~e~~~~~~~~l  363 (363)
T PF00155_consen  321 AQELLEEYGILVRPGSYFGVPGYIRISLASHS-EEDLEEALERL  363 (363)
T ss_dssp             HHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSC-HHHHHHHHHHH
T ss_pred             HHHHHHhCCEEEEecCCCCCCCEEEEEeccCC-HHHHHHHHhhC
Confidence            9999976 999999888666999999993332 36788877765

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=4e-42  Score=338.23  Aligned_cols=325  Identities=25%  Similarity=0.389  Sum_probs=265.8

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHH----hCC--CCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKD----SGL--ESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y~~-~g~~~lr~~ia~~----~g~--~~~-~i~~t~G~~~al~~~~~  164 (423)
                      .++++|+.+.++.+.++.+.+++.+ +. ....|++ .|..++|++++++    +|+  +++ +|++|+|+++++..++.
T Consensus        24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~  103 (387)
T PRK07777         24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL  103 (387)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence            3679999999888777777777665 22 2256865 5789999999987    354  354 79999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      +++++||+|+++.|+|..+...++..|.+++.++.++   ++.+|++++++.+. .++++|++++||||||.+++.++++
T Consensus       104 ~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~  182 (387)
T PRK07777        104 GLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-PRTRALIVNSPHNPTGTVLTAAELA  182 (387)
T ss_pred             HhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-cccEEEEEcCCCCCCCccCCHHHHH
Confidence            9999999999999999999999999999999998643   46799999999986 6899999999999999999988888


Q ss_pred             HHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--C
Q 014492          242 KILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (423)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~  311 (423)
                      +|++.    ++++|+||+|.++.+.+.   ...... ..+++++++||||.||++|+|+||+++++++++.+.....  .
T Consensus       183 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~  262 (387)
T PRK07777        183 AIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLT  262 (387)
T ss_pred             HHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcc
Confidence            77664    999999999998876432   122222 2568999999999999999999999999999998887664  4


Q ss_pred             CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--CCCHHHHHHHHH-hCC
Q 014492          312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMG  387 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--~~~~~~l~~~L~-~~g  387 (423)
                      +..+.+.|.++..++.. ..|+++.++.++++++.+.+.|++.++....|.+++|+|++++.  ..++.++++.|. ++|
T Consensus       263 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~g  342 (387)
T PRK07777        263 YVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVG  342 (387)
T ss_pred             cCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEecccccCCCCHHHHHHHHHHhCC
Confidence            56778888888888865 57888999999999999999999875333346678899998752  347889999997 689


Q ss_pred             cEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.|.++..+     ..++++||+++..  .+++.+++++|
T Consensus       343 v~v~pg~~f~~~~~~~~~~~Ri~~~~~--~~~l~~~l~~l  380 (387)
T PRK07777        343 VAAIPMSVFYDPADAWNHLVRFAFCKR--DDTLDEAIRRL  380 (387)
T ss_pred             EEEeCchHhCCCCcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            999998642     2357999999874  47899999887

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.4e-42  Score=313.82  Aligned_cols=326  Identities=21%  Similarity=0.301  Sum_probs=278.5

Q ss_pred             CCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh------CCCCCcEEEeCCHHHHHH
Q 014492           95 EDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELID  160 (423)
Q Consensus        95 ~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~al~  160 (423)
                      +++|.++.|++.    +++.++..+|+.+. .  ..++| |..|....|+++|+++      .+++++|++|+|..+|++
T Consensus        61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe  140 (447)
T KOG0259|consen   61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE  140 (447)
T ss_pred             ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence            478999998765    45677877887762 2  23678 7779999999999995      357899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEec--CCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      +++.+|.+||..|+++.|+|+.|...++..|.++..+.  .+.+|.+|++.++..++ ++|.+++++||+||+|.+++.+
T Consensus       141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-ENT~AivviNP~NPcGnVys~~  219 (447)
T KOG0259|consen  141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-ENTVAIVVINPNNPCGNVYSED  219 (447)
T ss_pred             HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-cCeeEEEEeCCCCCCcccccHH
Confidence            99999999999999999999999999999999999999  35789999999999998 7999999999999999999999


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCchhh---hhccCCcEEEEccChhhhcccCccccccccC--------HHHHH
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSIIE  303 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~--------~~~~~  303 (423)
                      .|++|++.    +++||.||+|.++.+++.+..   .+...--+++++|+||.|-.||||+||++..        ..+++
T Consensus       220 HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q  299 (447)
T KOG0259|consen  220 HLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ  299 (447)
T ss_pred             HHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHH
Confidence            99999875    999999999999998764432   2333456899999999999999999999872        33445


Q ss_pred             HHHHhcCC-CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeC-----CC
Q 014492          304 YLWRAKQP-YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVT-----SG  373 (423)
Q Consensus       304 ~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~-----~~  373 (423)
                      .+....+- .+++.+.|.|+-..|+.  +++++.....++.+.+...+.|++++.+.  +.|++.+|+|+++.     +-
T Consensus       300 ~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~  379 (447)
T KOG0259|consen  300 GIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDI  379 (447)
T ss_pred             HHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccc
Confidence            55554433 56788999999999986  68899999999999999999999999876  47899999998774     34


Q ss_pred             CCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          374 MDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       374 ~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      .|..+|++.|. |+.+.+-||..++.++|+||+++.+.  +.+++|++||+
T Consensus       380 ~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~--~~leea~~Rik  428 (447)
T KOG0259|consen  380 EDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEE--EMLEEAFSRIK  428 (447)
T ss_pred             cccHHHHHHHhhhcceEEeccccccCCCeEEEEEccCh--HHHHHHHHHHH
Confidence            57788999997 88999999999999999999999876  56889988874

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.7e-43  Score=346.88  Aligned_cols=322  Identities=21%  Similarity=0.272  Sum_probs=249.3

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh------C-C-C--CCcEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS------G-L-E--SDHILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~------g-~-~--~~~i~~t~G~~~al~~~~~  164 (423)
                      ++|+|+.+++++++++.+.++...+. +..||.+ |..++|+++++++      + . .  .++|++|+|+++++..++.
T Consensus       101 ~~i~l~~g~p~~~~~~~v~e~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~  179 (527)
T PRK09275        101 DAVSYVRDQLGFDADEFVYELVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD  179 (527)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence            57999999999999888888665553 2458655 8899999999843      1 1 2  2489999999999999988


Q ss_pred             H-----hcCCCCeEEEcCCCchhhHHHHHHCC--CeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      +     +++|||+|++++|+|+.|...++..|  ++++.++.  +++|.+|++++++++. +++|+|+++|||||||.++
T Consensus       180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~NPTG~v~  258 (527)
T PRK09275        180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPSNPPSVAM  258 (527)
T ss_pred             HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCcCCcCCCC
Confidence            6     68999999999999999999888764  55666664  3468999999999886 7899999999999999999


Q ss_pred             CHHHHHHHHcC------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-----HHHH
Q 014492          236 NDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEY  304 (423)
Q Consensus       236 ~~~~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-----~~~~  304 (423)
                      +.+++++|++.      +++||+||+|.+|.+........ ..+++|+++||||.||++|||+||++++++     +++.
T Consensus       259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~  337 (527)
T PRK09275        259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAK  337 (527)
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHh
Confidence            99998887642      79999999999987532221111 247899999999999999999999999876     3332


Q ss_pred             H--------------------------------HHhc--CCCCCcHHHHHH-----HHHHhCC-hHHHHHHHHHHHHHHH
Q 014492          305 L--------------------------------WRAK--QPYNVSVAAEVA-----ACAALQN-PIYLEKVKEALIKERE  344 (423)
Q Consensus       305 l--------------------------------~~~~--~~~~~~~~~~~a-----~~~~l~~-~~~~~~~~~~~~~~~~  344 (423)
                      +                                ++..  ...+++.+.|.+     +.++++. .++.+++++.++++++
T Consensus       338 l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~  417 (527)
T PRK09275        338 LPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYK  417 (527)
T ss_pred             ccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence            2                                2222  235677788876     3355654 5688999999999999


Q ss_pred             HHHHHHccCCCCeecCCCceEEEEEeCC----------------CCCHHHHHHHHH-hCCcEEEeCCCCC-CCCeEEEEe
Q 014492          345 RLFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDAKKLKDDLA-KMGVMIRHYNNKE-LKGYVRVSV  406 (423)
Q Consensus       345 ~l~~~L~~~~~~~~~p~~~~~~~~~~~~----------------~~~~~~l~~~L~-~~gI~v~~~~~~~-~~~~iRis~  406 (423)
                      .+.+.|. ++.....|.+++|+|++++.                ..+..+++.+|. ++||.+.||..++ .++++|||+
T Consensus       418 ~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~  496 (527)
T PRK09275        418 ALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSL  496 (527)
T ss_pred             HHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEE
Confidence            9999883 33222357889999998863                135778888887 7899999998854 367999999


Q ss_pred             cChhhHHHHHHHHhhh
Q 014492          407 GKPEHTDALMECLMHL  422 (423)
Q Consensus       407 ~~~~~~~~l~~al~~l  422 (423)
                      +..++ +.+.++.++|
T Consensus       497 a~~~~-~~~~~~~~rl  511 (527)
T PRK09275        497 ANLNE-EDYAKIGKAI  511 (527)
T ss_pred             ecCCH-HHHHHHHHHH
Confidence            85432 5677776665

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.4e-42  Score=337.79  Aligned_cols=320  Identities=25%  Similarity=0.417  Sum_probs=262.4

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C----CCCCC-CCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K----FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADELIDLI  162 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y-~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~  162 (423)
                      .++++|+.+.+++++++.+.+++.+. .    ...+| +..|..++|++++++++      +++++|++|+|+++++..+
T Consensus        33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~  112 (394)
T PRK06836         33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA  112 (394)
T ss_pred             CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence            46799999988788888888888652 1    13568 55689999999999973      5789999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++.++++||.|++++|+|..+...++..|++++.+|.+++ +++|++++++.+. ++++++++++||||||.+++.++++
T Consensus       113 ~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~~~~  191 (394)
T PRK06836        113 LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLK  191 (394)
T ss_pred             HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-cCceEEEEeCCCCCCCcCCCHHHHH
Confidence            9999999999999999999999999999999999997654 7899999999996 6899999999999999999999988


Q ss_pred             HHHcC----------CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH------
Q 014492          242 KILEM----------PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY------  304 (423)
Q Consensus       242 ~i~~~----------~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~------  304 (423)
                      +|++.          ++++|+||+|.++.+++.. .......+++++++||||.||+||+|+||+++++++.+.      
T Consensus       192 ~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~  271 (394)
T PRK06836        192 ALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAA  271 (394)
T ss_pred             HHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHH
Confidence            87532          6899999999998765422 222334678999999999999999999999998776332      


Q ss_pred             HHHhcC---CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          305 LWRAKQ---PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       305 l~~~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      +.....   .++.+.+.|.++..++++..    .++.++++++.+.+.|+++++....|.+|+|+|+++|. .+..++++
T Consensus       272 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~  346 (394)
T PRK06836        272 LVFANRILGFVNAPALMQRVVAKCLDATV----DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPE-EDDVAFCE  346 (394)
T ss_pred             HHHHhhccccccCCHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCC-CCHHHHHH
Confidence            211111   24678889999999987642    35667888999999998886433456778999999985 57888998


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|.++||.++++..+...+++||+++..  .+++.+++++|
T Consensus       347 ~l~~~gv~v~~g~~f~~~~~iRi~~~~~--~~~~~~~i~~l  385 (394)
T PRK06836        347 KAKKHNLLLVPGSGFGCPGYFRLSYCVD--TETIERSLPAF  385 (394)
T ss_pred             HHHhCCEEEECchhcCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            8889999999987766678999999843  48888888876

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=1.1e-41  Score=358.23  Aligned_cols=328  Identities=16%  Similarity=0.239  Sum_probs=255.1

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcc-hHHHHHHHHHHhCCCCC---cEEEeCCHHHHHHHHHHHh
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPE-SRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCV  166 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y~~~g-~~~lr~~ia~~~g~~~~---~i~~t~G~~~al~~~~~~l  166 (423)
                      .+.++|+|+.|+|++++++.+.+++.+ +.. .+.++.+. ...+++.+++++|++.+   +|++|+|+++++..+++++
T Consensus       695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL  774 (1082)
T PLN02672        695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC  774 (1082)
T ss_pred             CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence            356889999999999999999999876 222 12112221 45666666677787553   8999999999999999999


Q ss_pred             cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCC-CCcCcCCCHHHHHHH
Q 014492          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN-NPDGSIINDEDLLKI  243 (423)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~-NPtG~~~~~~~l~~i  243 (423)
                      ++|||.|+++.|+|+.|...++..|++++.+|++  ++|.+|++++++++.+.+.++|++|+|| ||||.+++.+++++|
T Consensus       775 l~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~L  854 (1082)
T PLN02672        775 VQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEI  854 (1082)
T ss_pred             cCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHH
Confidence            9999999999999999999999999999999975  4788999999999864345689999997 999999999999998


Q ss_pred             HcC----CCEEEEccCCccccCCCch------hhhh---cc---CCcEEEEccChhhhcccCccccccccCH-HHHHHHH
Q 014492          244 LEM----PILVVLDEAYTEFSGLESR------MEWV---KK---HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLW  306 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~~------~~~~---~~---~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~  306 (423)
                      ++.    +++||+||+|.++.+.+..      ...+   ..   ..++++++||||.|+++|+|+||+++++ ++++.+.
T Consensus       855 lela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~  934 (1082)
T PLN02672        855 LSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFH  934 (1082)
T ss_pred             HHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHH
Confidence            864    8999999999987764321      1111   11   2379999999999999999999999964 5888887


Q ss_pred             HhcCCCCC---cHHHHHHHHHHhC--Ch---HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC------
Q 014492          307 RAKQPYNV---SVAAEVAACAALQ--NP---IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS------  372 (423)
Q Consensus       307 ~~~~~~~~---~~~~~~a~~~~l~--~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~------  372 (423)
                      +.......   +..++.++..++.  +.   +++.+.++.++++++++.+.|++.++....|.+++|+|++++.      
T Consensus       935 ~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~ 1014 (1082)
T PLN02672        935 SAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTV 1014 (1082)
T ss_pred             HhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEccccccccc
Confidence            75433222   3334444444442  33   3466778889999999999999886544456778889987531      


Q ss_pred             -----------CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 -----------GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 -----------~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                                 +.++.++++.|.+ .||.+.+|..++.++|+||+++..+  +++.+++++|
T Consensus      1015 ~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~--e~LeeALerL 1074 (1082)
T PLN02672       1015 KLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALED--SEFDRALKAI 1074 (1082)
T ss_pred             cccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence                       2467889999984 5999999977677899999999743  6688888776

>PLN02231 alanine transaminase

Probab=100.00  E-value=4.5e-41  Score=339.35  Aligned_cols=324  Identities=17%  Similarity=0.273  Sum_probs=248.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCC-----CCCCCC-CcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLK-----FPYIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM  163 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~-----~~~~Y~-~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~  163 (423)
                      ++|++..+...|+. ..+.++...+.     ....|+ ..|.++||+++++++    |  +++++|++|+|+++++..++
T Consensus       130 ~~i~~~~~~~~fp~-~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~  208 (534)
T PLN02231        130 SLLDKSETHGLFSA-DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMM  208 (534)
T ss_pred             ccCCCCCccccCCH-HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHH
Confidence            56777665555653 33333332221     125584 458999999999987    4  57899999999999999999


Q ss_pred             HHhcC-CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCC
Q 014492          164 RCVLD-PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       164 ~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~  235 (423)
                      +.++. +||.|+++.|+|+.|...++..|++++.+++++  +|++|+++|++.+++.     ++|+++++|||||||.++
T Consensus       209 ~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl  288 (534)
T PLN02231        209 QLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL  288 (534)
T ss_pred             HHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC
Confidence            99984 799999999999999999999999999999753  5899999999988631     689999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCC--ch--hhhhc-------cCCcEEEEccChhhh-cccCcccccccc--
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLE--SR--MEWVK-------KHDNLIVLRTFSKRA-GLAGLRVGYGAF--  297 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~--~~--~~~~~-------~~~~~i~i~S~SK~~-g~~G~R~G~i~~--  297 (423)
                      +.+++++|++.    +++||+||+|.++.+++  ..  ...+.       ...++++++||||.+ |++|+|+||+++  
T Consensus       289 s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~  368 (534)
T PLN02231        289 AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG  368 (534)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEec
Confidence            99999998875    99999999999988742  11  11111       123689999999975 899999999986  


Q ss_pred             -CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhCCh--------H---HHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCc
Q 014492          298 -PLSIIEYLWRAKQP-YNVSVAAEVAACAALQNP--------I---YLEKVKEALIKERERLFKLLKDVPFLNP-YPSYS  363 (423)
Q Consensus       298 -~~~~~~~l~~~~~~-~~~~~~~~~a~~~~l~~~--------~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~  363 (423)
                       ++++++.+.+.... .+.+...|.++..+++.+        .   +.+.+++.++++++.+.+.|++++++.+ .|.++
T Consensus       369 ~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Gg  448 (534)
T PLN02231        369 FTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGA  448 (534)
T ss_pred             CCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCee
Confidence             68899888776543 345778888888888642        2   2335578899999999999998865664 57788


Q ss_pred             eEEEEEe--CCC----------CCHHHHHHHHH-hCCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          364 NFILCEV--TSG----------MDAKKLKDDLA-KMGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       364 ~~~~~~~--~~~----------~~~~~l~~~L~-~~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|+|+++  |..          .+...++..|+ ++||.+.||+.++   +..++|+++..++  +++.+++++|
T Consensus       449 fylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~--e~l~eal~RL  521 (534)
T PLN02231        449 MYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQE--DKIPAIVSRL  521 (534)
T ss_pred             eEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCH--HHHHHHHHHH
Confidence            9999554  421          11234556666 7899999998753   3457999997643  6788888876

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.1e-41  Score=331.81  Aligned_cols=314  Identities=18%  Similarity=0.206  Sum_probs=243.3

Q ss_pred             CCeeEcCCCCC-CCCCCH----HHHHHHhcC---CCCCCCC-CcchHHHHHHHHHHh---C---CCCCcEE--EeCCHHH
Q 014492           95 EDIVKIDANEN-PYGPPP----EVREALGQL---KFPYIYP-DPESRRLRAALAKDS---G---LESDHIL--VGCGADE  157 (423)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~----~v~~al~~~---~~~~~Y~-~~g~~~lr~~ia~~~---g---~~~~~i~--~t~G~~~  157 (423)
                      ++.++|+.|.+ ++.+++    .+.+++.+.   .....|+ ..|.++||+++++++   +   +++++|+  .|+|+++
T Consensus        29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~  108 (404)
T PTZ00376         29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG  108 (404)
T ss_pred             cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence            56799999975 354433    344554332   1225684 468999999999986   2   4778998  5999999


Q ss_pred             HHHHHHH---HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-C-CCCCCCHHHHHHHhhc--CCceEEEEcCCCCC
Q 014492          158 LIDLIMR---CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER--EKPKCIFLTSPNNP  230 (423)
Q Consensus       158 al~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP  230 (423)
                      ++..++.   .+++|||.|++++|+|+.|...++..|++++.+|+ + +++++|++.+++.+.+  .+++++++++||||
T Consensus       109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NP  188 (404)
T PTZ00376        109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNP  188 (404)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            9988865   56899999999999999999999999999999997 3 4589999999998853  34567778999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhhh-hccCCcEEEEccChhhhcccCcccccc---cc
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYG---AF  297 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~~-~~~~~~~i~i~S~SK~~g~~G~R~G~i---~~  297 (423)
                      ||.+++.+++++|++.    +++||+||+|.+|.+++.     .... ....+++++++||||.|+++|+|+||+   ++
T Consensus       189 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~  268 (404)
T PTZ00376        189 TGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA  268 (404)
T ss_pred             CCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC
Confidence            9999999999998764    999999999999987531     1122 223468999999999999999999998   57


Q ss_pred             CHHHHHHH----HHhc-CCC-CCcHHHHHHHHHHhCChH----H---HHHHHHHHHHHHHHHHHHHccCCC---C-eecC
Q 014492          298 PLSIIEYL----WRAK-QPY-NVSVAAEVAACAALQNPI----Y---LEKVKEALIKERERLFKLLKDVPF---L-NPYP  360 (423)
Q Consensus       298 ~~~~~~~l----~~~~-~~~-~~~~~~~~a~~~~l~~~~----~---~~~~~~~~~~~~~~l~~~L~~~~~---~-~~~p  360 (423)
                      ++++++.+    .+.. ..+ +.+.++|.++..+|++++    |   +++.+++++++++.+.+.|++++.   + ...|
T Consensus       269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p  348 (404)
T PTZ00376        269 NKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN  348 (404)
T ss_pred             CHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc
Confidence            88765544    3322 334 457889999999998853    2   455677889999999999988742   2 2357


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          361 SYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                      .+|+|+|++++     .+++++|. ++||.+.+++        ||+++  ..++++.+.++|+.
T Consensus       349 ~gg~f~~~~~~-----~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~  399 (404)
T PTZ00376        349 QIGMFSFTGLT-----KEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHD  399 (404)
T ss_pred             CceEEEecCCC-----HHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHH
Confidence            88999999874     57888888 5599998872        99998  66666677766654

>PLN02368 alanine transaminase

Probab=100.00  E-value=6.5e-42  Score=335.73  Aligned_cols=303  Identities=17%  Similarity=0.269  Sum_probs=241.8

Q ss_pred             HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCC--------C----------------------CCCHHHHHHH
Q 014492           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENP--------Y----------------------GPPPEVREAL  117 (423)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~----------------------~~~~~v~~al  117 (423)
                      ++++..+..+. ...+...+.+....+.++|+|+.|+++        +                      .+++.+.+++
T Consensus        12 ~~~~~~~~~~~-~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~   90 (407)
T PLN02368         12 NENVKKCQYAV-RGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK   90 (407)
T ss_pred             CHHHHhhhhhc-CCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence            44455455442 334555666666667789999999886        3                      1445555665


Q ss_pred             hcC---C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHH
Q 014492          118 GQL---K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEF  185 (423)
Q Consensus       118 ~~~---~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~  185 (423)
                      ..+   . ....|++. |.++||+++++++    |  +++++|++|+|+++++..++.+++ ++||.|++++|+|+.|..
T Consensus        91 ~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~  170 (407)
T PLN02368         91 HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA  170 (407)
T ss_pred             HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH
Confidence            543   1 13568654 7899999999987    5  578999999999999999999887 799999999999999999


Q ss_pred             HHHHCCCeEEEecCC--CCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEcc
Q 014492          186 DAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE  254 (423)
Q Consensus       186 ~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~De  254 (423)
                      .++..|++++.++.+  ++|++|++++++.+++     .++|++++||||||||.+++.+++++|++.    +++||+||
T Consensus       171 ~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE  250 (407)
T PLN02368        171 TISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDE  250 (407)
T ss_pred             HHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence            999999999999964  3589999999998863     168999999999999999999999998874    99999999


Q ss_pred             CCccccCCCc--hhh---hh---c----cCCcEEEEccChhhh-cccCccccccc---cCHHHHHHHHHhc-CCCCCcHH
Q 014492          255 AYTEFSGLES--RME---WV---K----KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAK-QPYNVSVA  317 (423)
Q Consensus       255 ay~~~~~~~~--~~~---~~---~----~~~~~i~i~S~SK~~-g~~G~R~G~i~---~~~~~~~~l~~~~-~~~~~~~~  317 (423)
                      +|.++.+++.  ...   .+   .    ..+++|+++||||.| |++|+|+||++   +++++++.+.+.. ..++.+.+
T Consensus       251 ~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~  330 (407)
T PLN02368        251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVS  330 (407)
T ss_pred             cccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcH
Confidence            9999886431  111   11   1    245899999999998 89999999999   5889999988874 34788999


Q ss_pred             HHHHHHHHhCCh--------HHH---HHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeC
Q 014492          318 AEVAACAALQNP--------IYL---EKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVT  371 (423)
Q Consensus       318 ~~~a~~~~l~~~--------~~~---~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~  371 (423)
                      +|.++.++|++.        ++.   +++++.++++|+.+.+.|++++++. ..|++++|+|++++
T Consensus       331 ~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~  396 (407)
T PLN02368        331 GQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK  396 (407)
T ss_pred             HHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence            999999999753        244   3467889999999999999986665 46889999997664

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=7.1e-41  Score=332.50  Aligned_cols=322  Identities=18%  Similarity=0.215  Sum_probs=244.4

Q ss_pred             CCeeEcCCCCCCCCCC--HHHHHHHhcC-C------CCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492           95 EDIVKIDANENPYGPP--PEVREALGQL-K------FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL  158 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~--~~v~~al~~~-~------~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a  158 (423)
                      .++|+|+.+.++..++  +.+.+++.+. .      ....|+++ |..+||+++++++      ++++++|++|+|++++
T Consensus        30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a  109 (416)
T PRK09440         30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA  109 (416)
T ss_pred             CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence            4579999988765443  3455665542 1      12468765 7899999999997      4688999999999999


Q ss_pred             HHHHHHHhcC-----CCCeEEE-cCCCchhhHHHHHHCCC------eEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEc
Q 014492          159 IDLIMRCVLD-----PGDKIVD-CPPTFTMYEFDAAVNGA------AVVKVPRKS-DFSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       159 l~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~g~------~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      +.+++++++.     +||.|++ +.|+|+.|...++..|.      .++.++.+. ++++|+++++  +. .+++++++|
T Consensus       110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~  186 (416)
T PRK09440        110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVS  186 (416)
T ss_pred             HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-CCceEEEEe
Confidence            9999999985     5899999 79999999886654332      222232211 3689999997  33 678999999


Q ss_pred             CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhh-ccCCcEEEEccChhhhcccCccccccccCHH
Q 014492          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       226 ~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      |||||||.+++.+++++|++.    +++||+||+|.++.......... ...+++|+++||||. +++|+|+||++++++
T Consensus       187 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~  265 (416)
T PRK09440        187 RPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEE  265 (416)
T ss_pred             cCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHH
Confidence            999999999999999998874    99999999998654221111111 125789999999995 899999999999999


Q ss_pred             HHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHH---H-HHHHHHHHHHHHHHHHccC-CC--Ce-ecCCCceEEEEEe
Q 014492          301 IIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE---K-VKEALIKERERLFKLLKDV-PF--LN-PYPSYSNFILCEV  370 (423)
Q Consensus       301 ~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~---~-~~~~~~~~~~~l~~~L~~~-~~--~~-~~p~~~~~~~~~~  370 (423)
                      +++.+......  ++++.+.|.++..++++.++.+   + .++.++++++.+.+.|++. +.  +. ..|.+|+|+|+++
T Consensus       266 l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~  345 (416)
T PRK09440        266 IIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWF  345 (416)
T ss_pred             HHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEEC
Confidence            99999877654  4678999999999999866532   3 5666788888888888653 21  23 3577899999999


Q ss_pred             CC-CCCHHHHHHHHHhCCcEEEeCCCC--C-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          371 TS-GMDAKKLKDDLAKMGVMIRHYNNK--E-------LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       371 ~~-~~~~~~l~~~L~~~gI~v~~~~~~--~-------~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++ +.++.++.+.|.++||.+++++.+  +       ..+++||+++..  .+++.+++++|
T Consensus       346 ~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~--~~~l~~~i~~l  405 (416)
T PRK09440        346 KDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQD--DEEIEKGIAIL  405 (416)
T ss_pred             CCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCC--HHHHHHHHHHH
Confidence            86 567889999998999999997653  1       135999999743  25677776665

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=3.9e-40  Score=324.90  Aligned_cols=315  Identities=18%  Similarity=0.188  Sum_probs=239.9

Q ss_pred             CCeeEcCCCC---CCCCCC--HHHHHHHhcCC---CCCCCC-CcchHHHHHHHHHHh---C---CCCCcE--EEeCCHHH
Q 014492           95 EDIVKIDANE---NPYGPP--PEVREALGQLK---FPYIYP-DPESRRLRAALAKDS---G---LESDHI--LVGCGADE  157 (423)
Q Consensus        95 ~~~i~l~~~~---~~~~~~--~~v~~al~~~~---~~~~Y~-~~g~~~lr~~ia~~~---g---~~~~~i--~~t~G~~~  157 (423)
                      .+.|+|+.|.   ++...+  +.+.+++.+..   ....|+ ..|.++||+++++++   +   +++++|  ++|+|+++
T Consensus        26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~  105 (396)
T PRK09257         26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG  105 (396)
T ss_pred             cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence            4679999995   333333  67888877642   224684 458999999999996   2   367877  99999999


Q ss_pred             HHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCc
Q 014492          158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD  231 (423)
Q Consensus       158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPt  231 (423)
                      ++.++++.+  ++|||+|++++|+|+.|...++..|++++.+|.  ++++++|++.+++.+.+  .+.+++++++|||||
T Consensus       106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT  185 (396)
T PRK09257        106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT  185 (396)
T ss_pred             HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence            999998766  589999999999999999999999999999996  34689999999998863  234566668999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCC-c-h--hhhhc-cCCcEEEEccChhhhcccCcccccccc---CH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-S-R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF---PL  299 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~-~-~--~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~  299 (423)
                      |.+++.+++++|++.    +++||+||+|.++.++. . .  ...+. ..+++++++||||.|+++|+|+||+++   ++
T Consensus       186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~  265 (396)
T PRK09257        186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA  265 (396)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence            999999999998874    89999999999988641 1 1  11222 356899999999999999999999973   44


Q ss_pred             HH----HHHHHHhc-CC-CCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC---CCe-ecCCC
Q 014492          300 SI----IEYLWRAK-QP-YNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP---FLN-PYPSY  362 (423)
Q Consensus       300 ~~----~~~l~~~~-~~-~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~  362 (423)
                      +.    ++.+.... .. ++++.+.|.++..++++.       +++++++++++++++.+.+.|+++.   .+. ..|.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~g  345 (396)
T PRK09257        266 EEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQR  345 (396)
T ss_pred             HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccc
Confidence            43    33343332 22 456888999999999874       3466789999999999999998864   133 45889


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |+|+|++++    .+.+.+.+.++||.+.+.      +  ||+++..+ .+.+.+++++|
T Consensus       346 g~~~w~~l~----~~~~~~l~~~~~V~~~p~------~--ri~~~~~~-~~~i~~~~~~i  392 (396)
T PRK09257        346 GMFSYSGLT----PEQVDRLREEFGVYAVGS------G--RINVAGLN-ESNIDYVAEAI  392 (396)
T ss_pred             eEEEecCCC----HHHHHHHHHcCCEEEcCC------C--eEEEeeCC-HHHHHHHHHHH
Confidence            999999884    333444345889998773      2  99997422 25566666655

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=2.6e-40  Score=329.13  Aligned_cols=322  Identities=19%  Similarity=0.242  Sum_probs=237.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC-cchHHHHHHHH-HHh----C---CCCC--cEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALA-KDS----G---LESD--HILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~-~g~~~lr~~ia-~~~----g---~~~~--~i~~t~G~~~al~~~~~  164 (423)
                      ++|+++.+++++++++.+.++...+. +..||. .+...++++++ +++    +   .+++  +|++|+|+++++..++.
T Consensus        95 ~~i~l~~g~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~  173 (521)
T TIGR03801        95 DIISYVIDQLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD  173 (521)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence            56899999999987655544443332 235754 35566666666 443    2   2333  89999999999999988


Q ss_pred             H-----hcCCCCeEEEcCCCchhhHHHHHHC--CCeEEEecCCC--C-----CCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKS--D-----FSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~v~~~~--~-----~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      +     +++|||+|+++.|+|+.|...++..  |++++.++.+.  +     |.+|+++++++++ +++|+|+++|||||
T Consensus       174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NP  252 (521)
T TIGR03801       174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNP  252 (521)
T ss_pred             HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCC
Confidence            7     6899999999999999999987775  78888887532  2     8899999998876 79999999999999


Q ss_pred             cCcCCCHHHHHHHHcC------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH----
Q 014492          231 DGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----  300 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~----  300 (423)
                      ||.+++.+++++|++.      +++||+||+|.+|.+........ ..+++++++||||.||++|||+||++++++    
T Consensus       253 TG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d  331 (521)
T TIGR03801       253 PSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFD  331 (521)
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchHHHH
Confidence            9999999998887542      79999999999987532221111 246899999999999999999999999764    


Q ss_pred             -HH--------HHH------------------------HHhc--CCCCCcHHHHH-----HHHHHhCC-hHHHHHHHHHH
Q 014492          301 -II--------EYL------------------------WRAK--QPYNVSVAAEV-----AACAALQN-PIYLEKVKEAL  339 (423)
Q Consensus       301 -~~--------~~l------------------------~~~~--~~~~~~~~~~~-----a~~~~l~~-~~~~~~~~~~~  339 (423)
                       ++        +.+                        ++..  ...+++.+.|.     ++.++++. .+|.+++++.+
T Consensus       332 ~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~  411 (521)
T TIGR03801       332 KLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDIC  411 (521)
T ss_pred             HHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence             22        111                        1111  12456677665     34556654 46889999999


Q ss_pred             HHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-C---------------CCHHHHHHHHH-hCCcEEEeCCCCCC-CCe
Q 014492          340 IKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-G---------------MDAKKLKDDLA-KMGVMIRHYNNKEL-KGY  401 (423)
Q Consensus       340 ~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~---------------~~~~~l~~~L~-~~gI~v~~~~~~~~-~~~  401 (423)
                      +++++.+.+.| .++.....|.+++|+|+++++ +               .+..+++.+|. ++||.+.||..++. +++
T Consensus       412 ~~R~~~l~~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~  490 (521)
T TIGR03801       412 RRREKLLFRGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWS  490 (521)
T ss_pred             HHHHHHHHHhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCe
Confidence            99999999998 333222346788999999973 1               15678888887 78999999987543 568


Q ss_pred             EEEEecChhhHHHHHHHHhhh
Q 014492          402 VRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       402 iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|||++...+ +.+.++.++|
T Consensus       491 vRisla~l~~-~~~~~~~~rl  510 (521)
T TIGR03801       491 VRVSLANLNE-YDYAEIGRAI  510 (521)
T ss_pred             EEEEecCCCH-HHHHHHHHHH
Confidence            9999985332 4455555554

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PLN02397 aspartate transaminase

Probab=100.00  E-value=9.8e-40  Score=323.66  Aligned_cols=314  Identities=17%  Similarity=0.232  Sum_probs=229.2

Q ss_pred             CCCeeEcCCCC-CCCCCCH----HHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh-CCC-----CCcE-----EEeC
Q 014492           94 PEDIVKIDANE-NPYGPPP----EVREALGQL-K--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHI-----LVGC  153 (423)
Q Consensus        94 ~~~~i~l~~~~-~~~~~~~----~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~-g~~-----~~~i-----~~t~  153 (423)
                      ....++++.+. ++...+|    .+.++...+ .  ....| |..|.++||+++++++ +..     +++|     +.++
T Consensus        47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~  126 (423)
T PLN02397         47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT  126 (423)
T ss_pred             CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence            34568888775 3333333    455554332 2  22468 5568999999999987 221     2333     3444


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCC
Q 014492          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNN  229 (423)
Q Consensus       154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~N  229 (423)
                      |+.+ +...+..++.|||+|++++|+|+.|...++..|++++.+|+  ++++++|++.+++.+.+  .+++++++++|||
T Consensus       127 Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N  205 (423)
T PLN02397        127 GSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN  205 (423)
T ss_pred             HHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            4443 33333345579999999999999999999999999999986  24588999999888752  4678888899999


Q ss_pred             CcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC---c--hhhhh-ccCCcEEEEccChhhhcccCccccccc--c
Q 014492          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGA--F  297 (423)
Q Consensus       230 PtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~--~  297 (423)
                      |||.+++.+++++|++.    +++||+||+|.+|.+++   .  ..... ...+++|+++||||.|+++|+|+||++  +
T Consensus       206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~  285 (423)
T PLN02397        206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC  285 (423)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence            99999999999998874    99999999999998743   1  12222 234579999999999999999999984  3


Q ss_pred             -CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHHccCC----CCeec
Q 014492          298 -PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLLKDVP----FLNPY  359 (423)
Q Consensus       298 -~~~~~~----~l~~~~~~--~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~~~  359 (423)
                       +++.++    .+.+....  ++.+.+.|.++..+|+++    +|   +++++++++++|+.+.+.|++++    +..+.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~  365 (423)
T PLN02397        286 KSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHIT  365 (423)
T ss_pred             CCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc
Confidence             555544    33343332  457788999999999875    33   56778899999999999999885    43456


Q ss_pred             CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          360 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       360 p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |++|+|+|++++     .++++.|. ++||.+.+++        ||+++..+ .+.+.+++++|
T Consensus       366 p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~~~--------Ri~~~~~~-~~~i~~~~~~i  415 (423)
T PLN02397        366 KQIGMFSFTGLN-----KEQVDRMTKEYHIYMTRDG--------RISMAGLS-SKNVPYLADAI  415 (423)
T ss_pred             CCceEEEecCCC-----HHHHHHHHHhCCEEECCCC--------eEEEeeCC-HHHHHHHHHHH
Confidence            899999999884     45888886 7899997432        99997322 14455555554

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=6.4e-39  Score=315.32  Aligned_cols=306  Identities=21%  Similarity=0.274  Sum_probs=235.4

Q ss_pred             HHHHHHHhcC--CCCCCCCC-cchHHHHHHHHHHh-----CCCC---CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          111 PEVREALGQL--KFPYIYPD-PESRRLRAALAKDS-----GLES---DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       111 ~~v~~al~~~--~~~~~Y~~-~g~~~lr~~ia~~~-----g~~~---~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      +.+.+++.+.  ....+|++ .|.++||+++++++     ...+   ++|++|+|+++++.+++..++++||.|++++|+
T Consensus        23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~  102 (388)
T PRK08637         23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHN  102 (388)
T ss_pred             HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCC
Confidence            4455555543  23367855 48899999999876     2332   578999999999999999999999999999999


Q ss_pred             chhhHHHHH-HCCCeEEEecCC-CCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHHHHHHc---------
Q 014492          180 FTMYEFDAA-VNGAAVVKVPRK-SDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILE---------  245 (423)
Q Consensus       180 y~~~~~~~~-~~g~~~~~v~~~-~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~---------  245 (423)
                      |+.|...+. ..|++++.+|.. +++++|++++++.++   +...++++++|||||||.+++.+++++|++         
T Consensus       103 y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~  182 (388)
T PRK08637        103 WGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAG  182 (388)
T ss_pred             CccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            999998754 689999999973 556899999999875   234456777899999999999999999876         


Q ss_pred             CCCEEEEccCCccccCCCchh----hh-hccCCcE--EEEccChhhhcccCccccccccC------HHHHHHHHHh----
Q 014492          246 MPILVVLDEAYTEFSGLESRM----EW-VKKHDNL--IVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLWRA----  308 (423)
Q Consensus       246 ~~~~li~Deay~~~~~~~~~~----~~-~~~~~~~--i~i~S~SK~~g~~G~R~G~i~~~------~~~~~~l~~~----  308 (423)
                      .+++||+||+|.+|.+++...    .. .+..+++  ++++|+||.|++||+|+||++.+      +++++.+.+.    
T Consensus       183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~  262 (388)
T PRK08637        183 TKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL  262 (388)
T ss_pred             CcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH
Confidence            389999999999997654221    12 2334575  45679999999999999999854      6777776542    


Q ss_pred             -c-CCCCCcHHHHHHHHHHhCChHHH---HHHHHHHHHHHHHHHHHHccCC---CCe-ecCCCceEEEEEeCCCCCHHHH
Q 014492          309 -K-QPYNVSVAAEVAACAALQNPIYL---EKVKEALIKERERLFKLLKDVP---FLN-PYPSYSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       309 -~-~~~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~~~~~~~~~~~~~~~l  379 (423)
                       . ..++.|.++|.++..+|+++.|.   ++.+..++++++.+.+.|++.+   .+. ..|++|+|+|++++ +.++.++
T Consensus       263 ~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~-~~~~~~l  341 (388)
T PRK08637        263 IRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK-GVDAEEL  341 (388)
T ss_pred             hhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC-hHHHHHH
Confidence             1 23578999999999999886653   4455668888888888887652   233 34578899999997 4567889


Q ss_pred             HHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          380 KDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.|. ++||.+.+.+    ++++||+++..+ .+++.+++++|
T Consensus       342 ~~~l~~~~gv~~~~~~----~~~iRi~~~~~~-~~~i~~~~~~l  380 (388)
T PRK08637        342 RVHLLEKYGIGTIALN----ETDLRIAFSCVE-EEDIPELFDSI  380 (388)
T ss_pred             HHHHhhhcceEEEecc----CCceEEEeecCC-HHHHHHHHHHH
Confidence            99986 7899887542    679999998744 37788877765

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=2e-38  Score=291.70  Aligned_cols=298  Identities=21%  Similarity=0.288  Sum_probs=249.9

Q ss_pred             CCCCCc-chHHHHHHHHHHh--------CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH-CCCe
Q 014492          124 YIYPDP-ESRRLRAALAKDS--------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAA  193 (423)
Q Consensus       124 ~~Y~~~-g~~~lr~~ia~~~--------g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~  193 (423)
                      ..|.|. |...+|+++|+++        ..+|+++++++|++.+++.++-+|++|||..+++.|.|+++...++. .|++
T Consensus       115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve  194 (471)
T KOG0256|consen  115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE  194 (471)
T ss_pred             hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence            346554 7899999999997        25899999999999999999999999999999999999999887775 6999


Q ss_pred             EEEecC--CCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCC
Q 014492          194 VVKVPR--KSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL  262 (423)
Q Consensus       194 ~~~v~~--~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~  262 (423)
                      +++|.+  .++|.++.+++|+++.+     .++|.|+++||+||.|++++++++..++++    ++.||+||+|+.-.++
T Consensus       195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~  274 (471)
T KOG0256|consen  195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFD  274 (471)
T ss_pred             EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccC
Confidence            999984  46889999999998854     478999999999999999999999999986    9999999999987665


Q ss_pred             Cchh----hh---hc-cCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh----
Q 014492          263 ESRM----EW---VK-KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP----  329 (423)
Q Consensus       263 ~~~~----~~---~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~----  329 (423)
                      .+..    ..   .. ..+++.++.|+||.||+||+|+|.+.. ++++.....+....+.+|+..|..+..+|.|.    
T Consensus       275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~  354 (471)
T KOG0256|consen  275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTR  354 (471)
T ss_pred             ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHH
Confidence            4321    11   11 467899999999999999999999998 66788888888888899999999999999985    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC------CCHHHHHHHHHhC-CcEEEeCCC--CCCCC
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKM-GVMIRHYNN--KELKG  400 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~------~~~~~l~~~L~~~-gI~v~~~~~--~~~~~  400 (423)
                      .++.+..++++.+.+++.+.|++++.-.....+|.|+|+++..-      ....++.+.+..+ ++.+.||+.  ...+|
T Consensus       355 ~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpG  434 (471)
T KOG0256|consen  355 EYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPG  434 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCC
Confidence            45778899999999999999999875455678899999998631      2345678888855 999999998  45689


Q ss_pred             eEEEEecChhhHHHHHHHHhhh
Q 014492          401 YVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       401 ~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |+|++|+...+ +.+.-|++|+
T Consensus       435 WFRvcFAn~~~-~t~~~am~Ri  455 (471)
T KOG0256|consen  435 WFRVCFANMSE-ETLEVAMRRL  455 (471)
T ss_pred             eEEEEeccCCH-HHHHHHHHHH
Confidence            99999997653 3344477776

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=5.7e-34  Score=276.15  Aligned_cols=322  Identities=34%  Similarity=0.517  Sum_probs=261.2

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhc--C-CCCCCC-CCcchHHHHHHHHHHhCCC------CCcEEEeCCHHHHHHHHHHHhc
Q 014492           98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-PDPESRRLRAALAKDSGLE------SDHILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~Y-~~~g~~~lr~~ia~~~g~~------~~~i~~t~G~~~al~~~~~~l~  167 (423)
                      ++|+.|.+++.++|.+.+++.+  . .....| +..+..++++.++++++..      ++++++++|+++++..++.++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~   80 (350)
T cd00609           1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL   80 (350)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence            4788899999998888777653  2 122445 4457889999999998644      6799999999999999999999


Q ss_pred             CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH--HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH---
Q 014492          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK---  242 (423)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~--~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~---  242 (423)
                      ++||+|+++.|+|..+...++..|.+++.++.+++...+.  +.++.... .++++|++++|+||||.+++.+++.+   
T Consensus        81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~  159 (350)
T cd00609          81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAE  159 (350)
T ss_pred             CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence            9999999999999999999999999999999766655554  56666554 78999999999999999999998885   


Q ss_pred             HHcC-CCEEEEccCCccccCCCchh---hhhccCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC--CCCc
Q 014492          243 ILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP--YNVS  315 (423)
Q Consensus       243 i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~--~~~~  315 (423)
                      +|+. |+++|+|++|..+...+...   ......+.+++++|++|.++.+|.|+||+++++ ++.+.+......  ++.+
T Consensus       160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
T cd00609         160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPS  239 (350)
T ss_pred             HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCC
Confidence            5554 99999999999876543322   233456778999999999998999999999998 788888776655  6788


Q ss_pred             HHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC
Q 014492          316 VAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY  393 (423)
Q Consensus       316 ~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~  393 (423)
                      ...+.++..+++.. ++.++.+++++++++++.+.|++.++.. ..+..++|+|++++.+.+...+.+.|.++||.+.++
T Consensus       240 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~  319 (350)
T cd00609         240 TLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPG  319 (350)
T ss_pred             hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecc
Confidence            89999999999886 7888999999999999999999987655 467789999999975545666777777889999987


Q ss_pred             CCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          394 NNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       394 ~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ..+.  .+.++||+++..  .+++.++++.|
T Consensus       320 ~~~~~~~~~~iRi~~~~~--~~~i~~~~~al  348 (350)
T cd00609         320 SAFGEGGEGFVRLSFATP--EEELEEALERL  348 (350)
T ss_pred             cccccCCCCeEEEEeeCC--HHHHHHHHHHh
Confidence            6543  678999999875  25555555544

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=1.6e-32  Score=267.39  Aligned_cols=319  Identities=21%  Similarity=0.210  Sum_probs=240.9

Q ss_pred             CCCCeeEcCCCCCCCC--CCHHHHHHHhcC-C-CCCC-------CCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           93 KPEDIVKIDANENPYG--PPPEVREALGQL-K-FPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~~-~-~~~~-------Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      .++++|||+.| ++++  ++|++.+++.+. . ++..       |+. +...+++++++++++. +++|++++|+.+.+ 
T Consensus        14 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G~~~~~-   90 (360)
T TIGR00858        14 DGRRLLNFSSN-DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSGYLANV-   90 (360)
T ss_pred             CCceEEecccC-CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECchHHHHH-
Confidence            46779999998 4454  558888888762 1 1111       222 2256799999999984 67888988876555 


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .++..++++||.|+++.|+|..+...++..|++++.++     .+|++.+++.+++   .++++|++++++||||...+.
T Consensus        91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~  165 (360)
T TIGR00858        91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYR-----HNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPL  165 (360)
T ss_pred             HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEec-----CCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCH
Confidence            56677889999999999999999998999999998887     3588999998864   247888888999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCc---hhhh--hccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      ++|.++|+. |+++|+||+|..+.++..   ....  +...+++++++|+||.||++|   ||+++++++++.+.+....
T Consensus       166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~  242 (360)
T TIGR00858       166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQALIDYLINRART  242 (360)
T ss_pred             HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHHHHHHHHhCcc
Confidence            999999997 999999999986543322   1111  123467899999999998777   9999999998887655433


Q ss_pred             C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      +    +.++..+.++.++++.....+..+++++++++++.+.|++++ +.+.++.++|+|+.++...+..++.+.|.++|
T Consensus       243 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  321 (360)
T TIGR00858       243 LIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-FTLMPSCTPIVPVIIGDNASALALAEELQQQG  321 (360)
T ss_pred             ceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-CccCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence            2    345555666667775433445678899999999999999886 45567788999999975456788999999999


Q ss_pred             cEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          388 VMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       388 I~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      |.+.++..   ..+.+++||+++...+.+++.+++++|+
T Consensus       322 I~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       322 IFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             eeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence            99987543   2345699999984333455666666553

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=1.5e-32  Score=264.27  Aligned_cols=293  Identities=16%  Similarity=0.188  Sum_probs=223.2

Q ss_pred             CCCCCHHHHHHHhcCCCCCCC-CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc---CCCc
Q 014492          106 PYGPPPEVREALGQLKFPYIY-PD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC---PPTF  180 (423)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Y-~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~---~p~y  180 (423)
                      .+..+|.+.++..+...  .| +. .-..+|++++|+++|++++++++++|+.+++..++.+++++||.|+++   .|+|
T Consensus        31 gl~~~~~~~~~~~~~~~--~~~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~  108 (346)
T TIGR03576        31 GLAGGFKIDEEDLELLE--TYVGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAH  108 (346)
T ss_pred             cCCCChhHHHHHHHHHH--HhcCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence            34457888877665311  12 11 236789999999999999999999999999999999999999999864   5799


Q ss_pred             hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCC
Q 014492          181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY  256 (423)
Q Consensus       181 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay  256 (423)
                      ..|...++..|++++.+       .|+++++. .  .++++|+++ ++||+|.+++.+++.+|++.    |++||+||+|
T Consensus       109 ~s~~~~~~l~ga~~~~~-------~~l~~l~~-~--~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy  177 (346)
T TIGR03576       109 PSIPRSCKLAGAEYFES-------DELSELKK-I--DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDAS  177 (346)
T ss_pred             hhHHHHHHHcCCEEecc-------CCHHHHhh-C--cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCc
Confidence            99999999999987543       24555432 2  467888885 46999999888888877653    9999999999


Q ss_pred             ccccCC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCChHH
Q 014492          257 TEFSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIY  331 (423)
Q Consensus       257 ~~~~~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~  331 (423)
                      ..+..+   .....   ..+..+++.||||  +++|+|+||+++++++++.+.+...++.  .+++.+.++.++|+... 
T Consensus       178 ~~~~~~~~~~~~~~---~~~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~-  251 (346)
T TIGR03576       178 GARVRRLYGQPPAL---DLGADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE-  251 (346)
T ss_pred             cccccccCCCCCHH---HcCCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhcc-
Confidence            976522   11111   1123377789999  5789999999999999999998887754  68889999999997633 


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH-HHHHHhCCcEEEeCCCC-CCCCeEEEEecCh
Q 014492          332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL-KDDLAKMGVMIRHYNNK-ELKGYVRVSVGKP  409 (423)
Q Consensus       332 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l-~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~  409 (423)
                      .+..++.++++++.+.+.++++   .+.++.++|+|++++. .++.++ .+.|.++||.++++..+ ..++|+||+++.+
T Consensus       252 ~~~~~~~l~~r~~~~~~~l~~~---~~~~~~~~f~~~~~~~-~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~  327 (346)
T TIGR03576       252 LSRIRDAFKRKEEVYLRLFDKL---NVERTPTGFVIKGVEE-EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAK  327 (346)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC---CCCcCCCeEEEEeCCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecC
Confidence            3566778888888888888754   3456677899999963 234344 45555899999998764 4578999999988


Q ss_pred             h----hHHHHHHHHhh
Q 014492          410 E----HTDALMECLMH  421 (423)
Q Consensus       410 ~----~~~~l~~al~~  421 (423)
                      +    +++.+.++|+.
T Consensus       328 ~~~~~~~~~~~~al~~  343 (346)
T TIGR03576       328 DAERIGDDYLVEAVKD  343 (346)
T ss_pred             hHHhcCHHHHHHHHHh
Confidence            8    58999999875

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=5.9e-32  Score=267.33  Aligned_cols=318  Identities=20%  Similarity=0.212  Sum_probs=242.7

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~-----------~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~  161 (423)
                      .+.++|+.+.... .++.+.+++.+. ......+.           ...+++|+.+++++|+ ++++|++|+|++++++.
T Consensus        18 ~~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~   96 (401)
T PRK10874         18 DAGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL   96 (401)
T ss_pred             CceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence            3468999877653 567888888652 11111111           1245899999999999 78999999999999999


Q ss_pred             HHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      +++++    +++||+|++++|.|+.    +...++..|++++.+|.+.++.+|++++++.+. +++++|++++|+||||.
T Consensus        97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~i~~~~n~tG~  175 (401)
T PRK10874         97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-PRTRILALGQMSNVTGG  175 (401)
T ss_pred             HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-cCcEEEEEeCCcccccC
Confidence            99987    3789999999999863    556677889999999987777899999999996 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc---
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---  309 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~---  309 (423)
                      +++.+++.++++. |+++|+|++|.......    .+...+..+++.|++|.+|.+|  +||++.++++++.+....   
T Consensus       176 ~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~----~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~  249 (401)
T PRK10874        176 CPDLARAITLAHQAGMVVMVDGAQGAVHFPA----DVQALDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMSPWQGGG  249 (401)
T ss_pred             cCCHHHHHHHHHHcCCEEEEECCcccccccC----CchhcCCCEEEEecccccCCCc--cEEEEEchHHHhcCCCeecCC
Confidence            9999999999987 99999999997433211    1122345588899999888777  599999999887654221   


Q ss_pred             --------------------CCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEE
Q 014492          310 --------------------QPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFI  366 (423)
Q Consensus       310 --------------------~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~  366 (423)
                                          ...+.+..++.++.++++..  ...++.+++.++.++++.+.|++++++.+. +..+.++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~  329 (401)
T PRK10874        250 KMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLL  329 (401)
T ss_pred             cceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEE
Confidence                                01245555666666666431  123456788888999999999988666543 4555677


Q ss_pred             EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++.++ +.+.+++.+.|.++||.++++...        +..++||||++   +.+|++++.++|+.
T Consensus       330 ~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~  394 (401)
T PRK10874        330 AFDFA-GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDR  394 (401)
T ss_pred             EEEEC-CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHH
Confidence            77776 567789999999999999987642        34689999998   88888888888865

>PRK10534 L-threonine aldolase; Provisional

Probab=100.00  E-value=6.5e-33  Score=267.45  Aligned_cols=304  Identities=17%  Similarity=0.166  Sum_probs=222.2

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           97 IVKIDANENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      +|||++|+|+. ++|.+.+++.+. .....| |++...+|++++++++|+++.  ++++|+++++.+++.+++++||+|+
T Consensus         1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~~--~v~~~g~~a~~~~l~~~~~~gd~vi   77 (333)
T PRK10534          1 MIDLRSDTVTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAA--LFLPTGTQANLVALLSHCERGEEYI   77 (333)
T ss_pred             CcccccccCCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCeE--EEeCchHHHHHHHHHHhcCCCCeeE
Confidence            47999999999 889999999763 333568 888999999999999998544  5666667777777777899999999


Q ss_pred             EcCCCchh-hHHH-HHHCC-CeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492          175 DCPPTFTM-YEFD-AAVNG-AAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (423)
Q Consensus       175 ~~~p~y~~-~~~~-~~~~g-~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~  246 (423)
                      ++.|+|.. |... +...| ++++.++.++++.+|++++++++.+.     ++++|++|||+  ||.+++.+++++|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~  155 (333)
T PRK10534         78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEF  155 (333)
T ss_pred             EechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHH
Confidence            98888853 4321 23344 78888887778899999999998632     68999999766  5999999999877653


Q ss_pred             ----CCEEEEccCCccccC--CCchhhhhccC-CcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCCCC----C
Q 014492          247 ----PILVVLDEAYTEFSG--LESRMEWVKKH-DNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQPYN----V  314 (423)
Q Consensus       247 ----~~~li~Deay~~~~~--~~~~~~~~~~~-~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~~~----~  314 (423)
                          +++|++||+|..+..  .+.....+... ++++  .||||.||++   +| |+++++++++.+.+...++.    .
T Consensus       156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~  230 (333)
T PRK10534        156 TRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQ  230 (333)
T ss_pred             HHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhh
Confidence                899999999873321  11222222223 3333  4899988764   67 68889999999987766443    2


Q ss_pred             cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC
Q 014492          315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN  394 (423)
Q Consensus       315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~  394 (423)
                      +.+++.++..+|++  . .+..++.+++|+++.+.|++++ +.+.+++++|+|+++++ .+..++.+.|.++||.++++.
T Consensus       231 ~~~~~a~~~~~l~~--~-~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~~nfv~~~~~~-~~~~~~~~~l~~~gi~v~~~~  305 (333)
T PRK10534        231 AGILAAAGLYALKH--N-VARLQEDHDNAAWLAEQLREAG-ADVMRQDTNMLFVRVGE-EQAAALGEYMRERNVLINASP  305 (333)
T ss_pred             HHHHHHHHHHHHHh--h-HHHHHHHHHHHHHHHHHHHhCC-CccCCCCceEEEEECCc-hhHHHHHHHHHHcCeeecCCc
Confidence            34567766666643  1 2333345567889999999886 46667789999999963 356788888889999998874


Q ss_pred             CCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          395 NKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       395 ~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                            ++|++..   +.++++++.++|+.
T Consensus       306 ------~~rl~~~~r~t~e~~~~~~~~l~~  329 (333)
T PRK10534        306 ------IVRLVTHLDVSREQLAEVVAHWRA  329 (333)
T ss_pred             ------eEEEEEEeCCCHHHHHHHHHHHHH
Confidence                  4677663   45566666666654

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=2.1e-31  Score=263.23  Aligned_cols=318  Identities=19%  Similarity=0.227  Sum_probs=240.2

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-C-C--CCCC-CCc-------chHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-K-F--PYIY-PDP-------ESRRLRAALAKDSGLE-SDHILVGCGADELIDLI  162 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~-~--~~~Y-~~~-------g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~  162 (423)
                      +.++|+.+.... .++.+.+++.+. . .  ...+ +..       ..+++|+.+++++|.+ +++|++|+|++++++++
T Consensus        16 ~~iyld~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~   94 (398)
T TIGR03392        16 GTVYLDSAATAL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV   94 (398)
T ss_pred             CeEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence            578999876653 567888887663 1 1  1111 111       2457999999999984 78999999999999999


Q ss_pred             HHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      +.++    +++||+|++++|.|+.    +...++..|++++.+|.+.++.+|++++++.+. +++++|++++|+||||.+
T Consensus        95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~~  173 (398)
T TIGR03392        95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT-PRTRILALGQMSNVTGGC  173 (398)
T ss_pred             HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEECcccccccc
Confidence            9987    4789999999999864    455667899999999987777899999999996 689999999999999999


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc----
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~----  309 (423)
                      ++.+++.++|+. |+++++|++|........    +...+..+++.|++|.+|.+|  +||++.++++++.+....    
T Consensus       174 ~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~  247 (398)
T TIGR03392       174 PDLARAITLAHQYGAVVVVDGAQGVVHGPPD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKTELLEAMPPWQGGGK  247 (398)
T ss_pred             CCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC----hhhcCCCEEEEecccccCCCc--eEEEEEcHHHHhhCCCeecCCc
Confidence            999999999987 999999999975432111    112334578888999888666  899999998887663211    


Q ss_pred             -------------------CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEE
Q 014492          310 -------------------QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFIL  367 (423)
Q Consensus       310 -------------------~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~  367 (423)
                                         ...+.+..+..++.++++.  ...+++..++.++.++++.+.|++++++.+. +....+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~  327 (398)
T TIGR03392       248 MLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLA  327 (398)
T ss_pred             eEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEE
Confidence                               0124455555555555542  1224567788889999999999988766644 33455667


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          368 CEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       368 ~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--------~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      +.++ +.+..++.+.|.++||.++.+...        +.+++||||+   .+.+|++++.++|+.+
T Consensus       328 ~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~  392 (398)
T TIGR03392       328 FDFA-GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAA  392 (398)
T ss_pred             EEeC-CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHH
Confidence            7776 567889999999999999987642        2357999998   6788888888888653

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=6e-32  Score=251.04  Aligned_cols=296  Identities=18%  Similarity=0.237  Sum_probs=237.7

Q ss_pred             CCC-CCcchHHHHHHHHHHhC-------CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEE
Q 014492          124 YIY-PDPESRRLRAALAKDSG-------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV  195 (423)
Q Consensus       124 ~~Y-~~~g~~~lr~~ia~~~g-------~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  195 (423)
                      ..| +..|.++|...+.++.+       .+.-+|++|+|.+.+++.+++.++++||.|+++..+|+......+..|++++
T Consensus        94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i  173 (472)
T KOG0634|consen   94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII  173 (472)
T ss_pred             hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence            457 44588999999999765       1223899999999999999999999999999999999988888899999999


Q ss_pred             EecCCCCCCCCHHHHHHHhhc--------CCceEEEEc-CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCC
Q 014492          196 KVPRKSDFSLNVELIADAVER--------EKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL  262 (423)
Q Consensus       196 ~v~~~~~~~~d~~~l~~~i~~--------~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~  262 (423)
                      +|++|.+ ++++|.|++.+.+        ++++++|.. +-+||||..++.+..++|.++    ++++|+||.|..+.+.
T Consensus       174 pv~md~~-Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~  252 (472)
T KOG0634|consen  174 PVKMDQD-GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN  252 (472)
T ss_pred             eccccCC-CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence            9998654 8999999998854        347788865 779999999999998887664    9999999999866543


Q ss_pred             C--------c-------h-------hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHH
Q 014492          263 E--------S-------R-------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA  318 (423)
Q Consensus       263 ~--------~-------~-------~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~  318 (423)
                      .        .       .       ...++..+|||...||||.++ ||+|+||+.+++-+++++.+....  .+++.+.
T Consensus       253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~s  331 (472)
T KOG0634|consen  253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFS  331 (472)
T ss_pred             ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecCccccc
Confidence            1        0       0       112344789999999999997 999999999999999988876653  3577788


Q ss_pred             HHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHcc-CCCC---eecCCCceEEEEEeC-------CCCC-HHHHH
Q 014492          319 EVAACAALQN------PIYLEKVKEALIKERERLFKLLKD-VPFL---NPYPSYSNFILCEVT-------SGMD-AKKLK  380 (423)
Q Consensus       319 ~~a~~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~-~~~~---~~~p~~~~~~~~~~~-------~~~~-~~~l~  380 (423)
                      |..+.+.|+.      .+|+.+.+..|.++++.+..+|.+ ++..   ...|.+|+|+|++++       +..+ .+++.
T Consensus       332 q~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i  411 (472)
T KOG0634|consen  332 QGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEII  411 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHH
Confidence            8888877775      268899999999999999999976 4433   246899999999997       4444 44444


Q ss_pred             HH-HHhCCcEEEeCCCC------C-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          381 DD-LAKMGVMIRHYNNK------E-LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       381 ~~-L~~~gI~v~~~~~~------~-~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .. +.++||.+..|..+      . ..-++|++++..+. ++|.++++++
T Consensus       412 ~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~-e~l~~g~~rf  460 (472)
T KOG0634|consen  412 FIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEP-EKLDEGIERF  460 (472)
T ss_pred             HHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCH-HHHHHHHHHH
Confidence            44 45999999988762      1 12399999997664 7999999986

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=6.1e-31  Score=259.54  Aligned_cols=320  Identities=13%  Similarity=0.154  Sum_probs=234.6

Q ss_pred             CCCCeeEcCCCCC-CCCCCHHHHHHHhc-C-CCCCCCCC-c---c----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANEN-PYGPPPEVREALGQ-L-KFPYIYPD-P---E----SRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~~~~Y~~-~---g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      .+.++|+|..++. .++++|++.+++.+ + .++.+|+. .   |    ..++|+++|+++|.  +++++++|+++++..
T Consensus        36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--~~~ii~~~~~~a~~~  113 (393)
T TIGR01822        36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT--EDTILYASCFDANGG  113 (393)
T ss_pred             CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CcEEEECchHHHHHH
Confidence            4578999999974 77888999888765 2 22234422 2   3    37899999999996  467777888899999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---C--CceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++.+++++||.|+++.|.|+.+...++..+.+.+.++     ..|++++++.+.+   .  ++++|++++++||||.+.+
T Consensus       114 ~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~  188 (393)
T TIGR01822       114 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP  188 (393)
T ss_pred             HHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC
Confidence            9999999999999999999999888888888876654     4789999988863   2  7888888899999999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      .+++.++|+. |+++|+||+|.....+..   .....+. .+.+++++|+||.+  +|+|+||+++++++++.+.....+
T Consensus       189 l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~~~~~~~l~~~~~~  266 (393)
T TIGR01822       189 LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTARKEVVELLRQRSRP  266 (393)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeCHHHHHHHHHhCcc
Confidence            9999999997 999999999964322111   1111211 24569999999976  478999999999999988765433


Q ss_pred             C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      +    +.++..+.++.++++..+..++.+++++++++++.+.|++.+ +.+.++.+.++.+.+++..++.++++.|.++|
T Consensus       267 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~g  345 (393)
T TIGR01822       267 YLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAG-FDIKPADHPIIPVMLYDAVLAQRFARRLLEEG  345 (393)
T ss_pred             ceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence            2    234555555666664333356778899999999999998775 34444455677777664456788999999889


Q ss_pred             cEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.+.....   +....++||+++...+.+++.+++++|
T Consensus       346 I~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l  383 (393)
T TIGR01822       346 IYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAF  383 (393)
T ss_pred             eeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence            99974322   123457999986443334455544443

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=100.00  E-value=8.5e-31  Score=255.95  Aligned_cols=280  Identities=19%  Similarity=0.189  Sum_probs=218.4

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHH
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE  208 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~  208 (423)
                      ..++++.+|+++|++  .+++++|+++++..++.+++++||.|+++.+.|......++..|++++.+|.+  .++.+|++
T Consensus        53 ~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~  130 (370)
T TIGR02539        53 IHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPE  130 (370)
T ss_pred             HHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHH
Confidence            568899999999985  46678999999999999999999999999888654446778899999999964  35789999


Q ss_pred             HHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          209 LIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       209 ~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      ++++.+.+      .++++|++++|+||||.+.+.+++.++++. |+++|+||+|..+.......    ..+..++++|+
T Consensus       131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~----~~~~di~v~s~  206 (370)
T TIGR02539       131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAK----EIGADFIVGSG  206 (370)
T ss_pred             HHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHH----HcCCCEEEeeC
Confidence            99999853      368899999999999999999999999987 99999999999653211111    22345778999


Q ss_pred             hhhhcccCccccccccCHHHHHHHHHhcCCCCCcHH----------HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHH
Q 014492          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA----------AEVAACAALQN-PIYLEKVKEALIKERERLFKLL  350 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~----------~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L  350 (423)
                      ||.++ +|.|+||+++++++++.+.....+|+.+.+          .+.++..+++. .++++...+.++. ++++.+.|
T Consensus       207 sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~-~~~l~~~L  284 (370)
T TIGR02539       207 HKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKK-TRWFVAEL  284 (370)
T ss_pred             ccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            99998 677899999999999999887776654333          55555666654 4555555555444 56899999


Q ss_pred             ccCCCCe--ecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcE-EEeCCCCCCCCeEEEEe--cChhhHHHHHH
Q 014492          351 KDVPFLN--PYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVM-IRHYNNKELKGYVRVSV--GKPEHTDALME  417 (423)
Q Consensus       351 ~~~~~~~--~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~-v~~~~~~~~~~~iRis~--~~~~~~~~l~~  417 (423)
                      +++++..  +.|+.++|+++++|..        .+...+.+.|.++||. ++++    .++++||++  .+.++++++.+
T Consensus       285 ~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~  360 (370)
T TIGR02539       285 EDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVD  360 (370)
T ss_pred             HhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHH
Confidence            9987432  3578899999988621        1244688999999997 5643    257999998  77888888888


Q ss_pred             HHhhh
Q 014492          418 CLMHL  422 (423)
Q Consensus       418 al~~l  422 (423)
                      +|+++
T Consensus       361 ~L~~~  365 (370)
T TIGR02539       361 SFEEI  365 (370)
T ss_pred             HHHHH
Confidence            87754

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=100.00  E-value=2.5e-30  Score=251.75  Aligned_cols=312  Identities=18%  Similarity=0.120  Sum_probs=234.3

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Y~~~g--~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      .+.+.++.+.+++.+....++|+...  .+++++.+++++|+++ +.+++++|+++++..++.+++.+||.|++..++|.
T Consensus         6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~   85 (356)
T cd06451           6 GPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVF   85 (356)
T ss_pred             CCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCch
Confidence            45666789999997643335566543  6689999999999854 45788898899999999999999999999988776


Q ss_pred             h--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492          182 M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (423)
Q Consensus       182 ~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~  258 (423)
                      .  +...++..|++++.+|.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++++. |+++++|++|..
T Consensus        86 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~  165 (356)
T cd06451          86 GDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSL  165 (356)
T ss_pred             hHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhc
Confidence            4  5667788999999999876778999999999974489999999999999999999999999987 999999999863


Q ss_pred             ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--hc-------------------CCCCCcHH
Q 014492          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AK-------------------QPYNVSVA  317 (423)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~-------------------~~~~~~~~  317 (423)
                      ..   .... ....+..+++.|++|.++.+ .++||++.+++.++.+..  ..                   ...+.+..
T Consensus       166 g~---~~~~-~~~~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~  240 (356)
T cd06451         166 GG---EPFR-MDEWGVDVAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVN  240 (356)
T ss_pred             cC---cccc-ccccCccEEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHH
Confidence            22   1111 11223346678899998743 468999999998887753  00                   11123444


Q ss_pred             HHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-C--CceEEEEEeCCCCCHHHHHHHHHhC-CcEEE
Q 014492          318 AEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-S--YSNFILCEVTSGMDAKKLKDDLAKM-GVMIR  391 (423)
Q Consensus       318 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~--~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~  391 (423)
                      .+.++.++++.  ...+++..++.+++++++.+.|+++++....+ .  .+.++|+.++++.+..++++.|.++ ||.++
T Consensus       241 ~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~  320 (356)
T cd06451         241 LLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIA  320 (356)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEe
Confidence            45555555543  23456778888899999999998875322222 1  3345677777677899999999977 99999


Q ss_pred             eCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          392 HYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       392 ~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++..+..++++|++++   +.++++++.++|+.
T Consensus       321 ~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~  353 (356)
T cd06451         321 GGLGPTAGKVFRIGHMGEATREDVLGVLSALEE  353 (356)
T ss_pred             cccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            8765445679999994   55667777776665

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=100.00  E-value=2.7e-30  Score=255.73  Aligned_cols=320  Identities=21%  Similarity=0.219  Sum_probs=240.8

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCC-------C----cchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYP-------D----PESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~-------~----~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      ++++++|+.+... ++++.+.+++.+. ......+       .    ...+++|+.+++++|.+ +++|++|+|+++++.
T Consensus        16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~   94 (403)
T TIGR01979        16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESIN   94 (403)
T ss_pred             CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence            4567999987766 3567788888652 1111111       1    12458999999999997 689999999999999


Q ss_pred             HHHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          161 LIMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       161 ~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      +++.++    +++||+|+++++.|+.    +...++..|++++.++.++++.+|++++++.+. ++++++++++|+||||
T Consensus        95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-~~~~lv~~~~~~~~tG  173 (403)
T TIGR01979        95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-EKTKLVAITHVSNVLG  173 (403)
T ss_pred             HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-cCCeEEEEEccccccc
Confidence            998875    5789999999998764    345566789999999987777899999999996 6899999999999999


Q ss_pred             cCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc--
Q 014492          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--  309 (423)
Q Consensus       233 ~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--  309 (423)
                      .++|.+++.++++. |+++|+|++|+.....   . .+...+.++++.|++|.+|.+|  +|++++++++++.+....  
T Consensus       174 ~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---~-~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~g  247 (403)
T TIGR01979       174 TVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---V-DVQALDCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMPPFLGG  247 (403)
T ss_pred             ccCCHHHHHHHHHHcCCEEEEEchhhcCccc---c-CccccCCCEEEEecccccCCCC--ceEEEEchHHHhcCCCeecC
Confidence            99999999999987 9999999999743321   1 1223345689999999888666  899999888776653110  


Q ss_pred             ---------------------CCCCCcHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHHccCCCCeec-CC----
Q 014492          310 ---------------------QPYNVSVAAEVAACAALQNP-I-YLEKVKEALIKERERLFKLLKDVPFLNPY-PS----  361 (423)
Q Consensus       310 ---------------------~~~~~~~~~~~a~~~~l~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~----  361 (423)
                                           ...+.+.....++..+++.. + ..++.+++..+.++++.+.|++++++.+. |.    
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~  327 (403)
T TIGR01979       248 GEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAED  327 (403)
T ss_pred             CCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccc
Confidence                                 01134555666666666431 1 25677888999999999999888766654 32    


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+.++.+.++ +.+..++.+.|.++||.++.+..        .+.++++|||++   +.+|++++.++|+.+
T Consensus       328 ~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~  398 (403)
T TIGR01979       328 RGGIISFNVE-GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKV  398 (403)
T ss_pred             cCceEEEEeC-CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHH
Confidence            2667777876 46678899989999999987642        233679999987   677888888888754

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=100.00  E-value=4.8e-30  Score=252.43  Aligned_cols=318  Identities=19%  Similarity=0.166  Sum_probs=234.2

Q ss_pred             CCCCeeEcCCCCC-CCCCCHHHHHHHhcC-C-CCC---CC-----CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANEN-PYGPPPEVREALGQL-K-FPY---IY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~-~-~~~---~Y-----~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      .++++|||..+++ .+.++|++.+++.+. . +..   .|     ..+-..+++++++++++. ++.|++++|+ +++..
T Consensus        37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~g~-~~~~~  114 (385)
T PRK05958         37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFSSGY-AANLA  114 (385)
T ss_pred             CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHH
Confidence            5678999999875 345678899888762 1 111   11     122357899999999983 5566666655 55556


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      ++..++++||.|+++.|+|+.+...++..|++++.++.     .|++.+++.+++.  ++.++++.+++||||...+.++
T Consensus       115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~  189 (385)
T PRK05958        115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAE  189 (385)
T ss_pred             HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHH
Confidence            77788999999999999999999888889999998874     3789999988643  3555665689999999999999


Q ss_pred             HHHHHcC-CCEEEEccCCccccCC--Cc-hhh--hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGL--ES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~--~~-~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~-  312 (423)
                      +.++|+. |+++|+||+|..+..+  +. ...  .+...++++++.|+||.+|++|   ||+++++++++.+.+....+ 
T Consensus       190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~  266 (385)
T PRK05958        190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSETLIDYLINRARPFI  266 (385)
T ss_pred             HHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCHHHHHHHHHhCccce
Confidence            9999997 9999999999765332  11 111  2334567899999999998777   99999999888876544332 


Q ss_pred             ---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          313 ---NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       313 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                         +.++..+.++.++++..+..++..+++.++++++.+.|++++ +.+.++.++|+++.+++..++.++.+.|.++||.
T Consensus       267 ~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~  345 (385)
T PRK05958        267 FTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQLMDSQSAIQPLIVGDNERALALAAALQEQGFW  345 (385)
T ss_pred             ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence               345566666667775422225677889999999999998875 3445667888999987545677899999999999


Q ss_pred             EEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          390 IRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       390 v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++++..+   .+++++||+++   +.++++++.++|+.
T Consensus       346 v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~  383 (385)
T PRK05958        346 VGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE  383 (385)
T ss_pred             EecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence            9875432   23579999997   55555555555543

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=100.00  E-value=1.7e-30  Score=257.39  Aligned_cols=317  Identities=20%  Similarity=0.191  Sum_probs=232.7

Q ss_pred             CCeeEcCCC-CCCCCCCHHHHHHHhc-CC-CC-------CCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~-------~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ++.+.|+++ +++++++|.+++++.+ +. ++       ..|+.. ...+|++++++++|. ++.|++++|+ +++..++
T Consensus        46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-~~~i~~~sG~-~a~~~~i  123 (410)
T PRK13392         46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-ESALLFTSGY-VSNDAAL  123 (410)
T ss_pred             ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-CCEEEECcHH-HHHHHHH
Confidence            345666554 8889999999988866 21 21       123443 467899999999995 5788888886 5666666


Q ss_pred             HHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHH
Q 014492          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ..+..  +|+.|+++...|..+...++..|+++..++.+     |.+.+++.+.   .+++++|++++|+||||.+++.+
T Consensus       124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~  198 (410)
T PRK13392        124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE  198 (410)
T ss_pred             HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence            65643  88988887777877777778889988777531     4445555443   25789999999999999999999


Q ss_pred             HHHHHHcC-CCEEEEccCCccccCCCc--hh-hhhccCCc-EEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492          239 DLLKILEM-PILVVLDEAYTEFSGLES--RM-EWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (423)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~--~~-~~~~~~~~-~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~-  312 (423)
                      ++.++++. ++++|+||+|....+++.  .. ...+..++ .++++||||.||++|   ||+++++++++.+.+...++ 
T Consensus       199 ~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~  275 (410)
T PRK13392        199 AICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFI  275 (410)
T ss_pred             HHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchh
Confidence            99999987 999999999984332221  11 11111122 488899999999998   99999999999888776543 


Q ss_pred             ---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014492          313 ---NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV  388 (423)
Q Consensus       313 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI  388 (423)
                         ..+++.+.++.++|+..+.....+++++++++++.+.|++++ +.+.++.++|+.+.++...+..++.+.|+ ++||
T Consensus       276 ~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI  354 (410)
T PRK13392        276 FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG-IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGI  354 (410)
T ss_pred             ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCE
Confidence               345677888888887644445566788999999999999875 45556778887777653334568899886 7899


Q ss_pred             EEEeCCC---CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          389 MIRHYNN---KELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~---~~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      .+++...   +.+..++||++   .+.++++++.++|+++
T Consensus       355 ~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~  394 (410)
T PRK13392        355 YIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAI  394 (410)
T ss_pred             EEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            9997654   23457999997   5777788888887654

>PLN02721 threonine aldolase

Probab=99.98  E-value=3.6e-30  Score=250.35  Aligned_cols=311  Identities=21%  Similarity=0.217  Sum_probs=218.8

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC--CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC-CCCe
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL--KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDK  172 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~-~gd~  172 (423)
                      .+++|+.|.+++ +++.+.+++.+.  .....|+++...+||+++++++|.+. .+++++| ++++..++..+++ +||.
T Consensus         6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~G-s~a~~~~l~~~~~~~gd~   82 (353)
T PLN02721          6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKEA-ALFVPSG-TMGNLISVLVHCDVRGSE   82 (353)
T ss_pred             hhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCce-eEEecCc-cHHHHHHHHHHccCCCCe
Confidence            468999999986 678899998863  33334455557899999999999753 4445555 4455577777777 9999


Q ss_pred             EEEcCCCch-hhHH--HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CCceEEEEcC-CCCCcCcCCCHHHHHH
Q 014492          173 IVDCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTS-PNNPDGSIINDEDLLK  242 (423)
Q Consensus       173 Vl~~~p~y~-~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~-p~NPtG~~~~~~~l~~  242 (423)
                      |++++|+|. .+..  .+...|++++.+|.++++.+|++++++.+++      +++++|++++ +|||||.+++.+++++
T Consensus        83 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~  162 (353)
T PLN02721         83 VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK  162 (353)
T ss_pred             EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence            999999985 3332  5677899999999777778999999999963      4789999986 5889999999776655


Q ss_pred             H---HcC-CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccc-cccCHHHHHHHHHhcCCCC-
Q 014492          243 I---LEM-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPYN-  313 (423)
Q Consensus       243 i---~~~-~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~-i~~~~~~~~~l~~~~~~~~-  313 (423)
                      |   |+. |+++|+||+|.....   +..........+  .++.|+||.++.   ++|+ ++.++++++.+......+. 
T Consensus       163 l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~  237 (353)
T PLN02721        163 VGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGG  237 (353)
T ss_pred             HHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCC
Confidence            5   444 999999999863321   111111121223  445579998763   3565 6678999888766554332 


Q ss_pred             -CcHHHHHH--HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCceEEEEEeCCC--CCHHHHHHHHHhC
Q 014492          314 -VSVAAEVA--ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYSNFILCEVTSG--MDAKKLKDDLAKM  386 (423)
Q Consensus       314 -~~~~~~~a--~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~~~~~~~~~~~--~~~~~l~~~L~~~  386 (423)
                       .+...+.+  +...+  .++.++.. +..++++++.+.|++++++.  +.+..++|+|++++++  .+...+++.|.++
T Consensus       238 ~~~~~~~~~~~~~~~l--~~~~~~~~-~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~  314 (353)
T PLN02721        238 GMRQVGVLAAAALVAL--QENVPKLE-DDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEH  314 (353)
T ss_pred             CeehhHHHHHHHHHHH--HHHHHHHH-HHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhC
Confidence             22222222  22233  23344333 33567889999999886553  3455678999999753  5788999999999


Q ss_pred             CcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          387 GVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       387 gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ||.++++.    .+++|++++   +.++++++.++|++
T Consensus       315 gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~  348 (353)
T PLN02721        315 GVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQ  348 (353)
T ss_pred             CcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHH
Confidence            99999875    579999997   66666667666654

>PRK02948 cysteine desulfurase; Provisional

Probab=99.98  E-value=1e-30  Score=256.86  Aligned_cols=316  Identities=16%  Similarity=0.144  Sum_probs=234.5

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-C-C----CCCCCC-----cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           98 VKIDANENPYGPPPEVREALGQL-K-F----PYIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~-~----~~~Y~~-----~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      ++|+.+.... +++.+++++.+. . .    ...|..     .-.+++|+.+++++|.++++|++++|+++++..++..+
T Consensus         2 ~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~   80 (381)
T PRK02948          2 IYLDYAATTP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL   80 (381)
T ss_pred             EeccCCCCCC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence            5777765543 567888888652 1 1    011110     11457899999999999999999999999999988877


Q ss_pred             c----CCCCeEEEcCCCchhh---HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          167 L----DPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      +    ++||.|++....|+.+   ...++..|++++.+|.+.++.+|++++++.+. +++++|++++|+||||.++|.++
T Consensus        81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~  159 (381)
T PRK02948         81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-PDTVLASIQHANSEIGTIQPIAE  159 (381)
T ss_pred             HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-CCCEEEEEECCcCCcEeehhHHH
Confidence            5    5689999988777644   34456689999999987777899999999986 68899999999999999999999


Q ss_pred             HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHHH------hcCC
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWR------AKQP  311 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~~------~~~~  311 (423)
                      +.++++. |+++++|+++.... .+.   .+...+.++++.|++|.+|.+|  +|+++.++++ ...+..      ...+
T Consensus       160 I~~l~~~~~~~vivD~~~~~g~-~~~---~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~  233 (381)
T PRK02948        160 IGALLKKYNVLFHSDCVQTFGK-LPI---DVFEMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRP  233 (381)
T ss_pred             HHHHHHHcCCEEEEEChhhccc-ccc---CcccCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCC
Confidence            9999987 99999997765321 111   1224466788999999998888  7888877654 111110      0135


Q ss_pred             CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHh
Q 014492          312 YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAK  385 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~  385 (423)
                      ++++.+++.++.++++.. ++.++.+++++++++++.+.|+++++........+     .+.+.++ +.+..++...|.+
T Consensus       234 ~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~  312 (381)
T PRK02948        234 GTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK-GIEGQYTMLECNR  312 (381)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC-CCCHHHHHHhccc
Confidence            678899999999888763 67888899999999999999998864222111122     2333444 5677888888889


Q ss_pred             CCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      +||.++.+...                   ...+++|||++   +.+|++++.++|+.+
T Consensus       313 ~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~  371 (381)
T PRK02948        313 RGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETI  371 (381)
T ss_pred             CCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            99999976530                   12479999998   788888888888753

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.98  E-value=9.1e-30  Score=253.04  Aligned_cols=335  Identities=16%  Similarity=0.143  Sum_probs=239.5

Q ss_pred             CchHHHHHHhCCCCCCeeEcCCCCC--CCCCCH---HHHHHHhc-C-CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492           81 LPFEVLSIQLGRKPEDIVKIDANEN--PYGPPP---EVREALGQ-L-KFPYIY-PDPESRRLRAALAKDSGLESDHILVG  152 (423)
Q Consensus        81 ~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~~---~v~~al~~-~-~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t  152 (423)
                      ...+..++++...+.++|+|..+++  ++.++.   .+.+++.+ + .....| +..+..+||++++++++.  +++++|
T Consensus        22 ~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~--~~vv~t   99 (460)
T PRK13238         22 TTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY--PYTIPT   99 (460)
T ss_pred             cCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC--CcEEEC
Confidence            3455566667677788999999998  677655   45555443 2 222568 566899999999999985  579999


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--------CCC--CCHHHHHHHhhc---CCc
Q 014492          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--------DFS--LNVELIADAVER---EKP  219 (423)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--------~~~--~d~~~l~~~i~~---~~~  219 (423)
                      +|+++++.+++.++++||| |++++|.|..|....+..|++++.++.+.        +|.  +|+++|++.+.+   +++
T Consensus       100 ~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~t  178 (460)
T PRK13238        100 HQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENV  178 (460)
T ss_pred             CCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCce
Confidence            9999999999999999999 99999999999988899999999999642        344  999999999974   369


Q ss_pred             eEEEEcCCCCCcC-cCCCHHHHHHHHc---C-CCEEEEccCCcc--ccCCCc---hhhhhccCCcEEEEccChhhhcccC
Q 014492          220 KCIFLTSPNNPDG-SIINDEDLLKILE---M-PILVVLDEAYTE--FSGLES---RMEWVKKHDNLIVLRTFSKRAGLAG  289 (423)
Q Consensus       220 ~~i~l~~p~NPtG-~~~~~~~l~~i~~---~-~~~li~Deay~~--~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G  289 (423)
                      ++|++++|+|||| .+++.+++++|++   . |++||+|+++..  ..+...   ........+-...++|++|.+.+.|
T Consensus       179 k~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg  258 (460)
T PRK13238        179 PFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSA  258 (460)
T ss_pred             eEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEec
Confidence            9999999999998 9999887666655   3 999999997742  111100   0000000011234466677766667


Q ss_pred             cccc------ccccC-HHHHHHHHHhcC------CCC-CcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHcc
Q 014492          290 LRVG------YGAFP-LSIIEYLWRAKQ------PYN-VSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKD  352 (423)
Q Consensus       290 ~R~G------~i~~~-~~~~~~l~~~~~------~~~-~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~  352 (423)
                      +|.|      +++++ +++++++.....      .++ .+...|.|+..+|.+   .+++..+    .+++++|.+.|++
T Consensus       259 ~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~~~l~~~L~~  334 (460)
T PRK13238        259 KKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQVEYLGEGLEE  334 (460)
T ss_pred             ccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHHHHHHHHHHH
Confidence            6653      55666 578888876631      123 344456777666643   2333333    3357899999988


Q ss_pred             CCCCeecCCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCC-------CC------CCCeEEEEec---
Q 014492          353 VPFLNPYPSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNN-------KE------LKGYVRVSVG---  407 (423)
Q Consensus       353 ~~~~~~~p~~~~~~~~~~~~--------~~~~~~l~~~L~-~~gI~v~~~~~-------~~------~~~~iRis~~---  407 (423)
                      .++-.+.|.+|.|+++++.+        +..+.+++..|. +.||.+.+++.       ..      ....+|+++.   
T Consensus       335 ~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~  414 (460)
T PRK13238        335 AGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRV  414 (460)
T ss_pred             CCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEeccccc
Confidence            87656678999999998852        124677888876 89999987653       11      1479999986   


Q ss_pred             -ChhhHHHHHHHHhhh
Q 014492          408 -KPEHTDALMECLMHL  422 (423)
Q Consensus       408 -~~~~~~~l~~al~~l  422 (423)
                       +.++++.+.++|+.+
T Consensus       415 ~~~~~~~~~~~~l~~~  430 (460)
T PRK13238        415 YTQSHMDYVAEALKAV  430 (460)
T ss_pred             CCHHHHHHHHHHHHHH
Confidence             455667777777654

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.98  E-value=5.1e-30  Score=249.98  Aligned_cols=304  Identities=20%  Similarity=0.224  Sum_probs=225.2

Q ss_pred             CCCHHHHHHHhcCCCCC--------CC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc
Q 014492          108 GPPPEVREALGQLKFPY--------IY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC  176 (423)
Q Consensus       108 ~~~~~v~~al~~~~~~~--------~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~  176 (423)
                      +..+++.+++.+...+.        ..   .++...++++++++++|+  +++++|+|+++++..++.+++++||+|+++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~   89 (361)
T cd06452          12 RLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDWVVVD   89 (361)
T ss_pred             CCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence            34577778877642111        11   123467999999999998  789999999999999999999999999999


Q ss_pred             CCCchhhHHHHHHCCCeEEEecCCCC--CCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C
Q 014492          177 PPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (423)
Q Consensus       177 ~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~  247 (423)
                      .++|......++..|++++.++.+.+  +.+|++++++.+.+      .++++|++++|+||||.+.+.+++.++++. |
T Consensus        90 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~  169 (361)
T cd06452          90 GLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYG  169 (361)
T ss_pred             CCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcC
Confidence            99887666678889999999997643  58999999998863      378999999999999999999999999987 9


Q ss_pred             CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcH----------H
Q 014492          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV----------A  317 (423)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~----------~  317 (423)
                      +++|+|++|........    ....+..++++|+||.++ +|.|+||+++++++++++.+...+|+.+.          .
T Consensus       170 ~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  244 (361)
T cd06452         170 VPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGA  244 (361)
T ss_pred             CeEEEECCcccCCcCCC----HHHcCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccccceeeeeccccCch
Confidence            99999999984321111    112345699999999997 56699999999999999877665443321          1


Q ss_pred             HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCCceEEEEEeCC--------CCCHHHHHHHHHh
Q 014492          318 AEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS--------GMDAKKLKDDLAK  385 (423)
Q Consensus       318 ~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~~~~~~~~~--------~~~~~~l~~~L~~  385 (423)
                      .+.++.+++.. .++++...+. .++++++.+.|++++++.+.   ++..+|+.++.+.        .....++.+.|++
T Consensus       245 ~~~~~~~al~~~~~~~~~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~  323 (361)
T cd06452         245 PLVTLMASFPHVKERVKRWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKK  323 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHH
Confidence            23333333322 2333333333 34557899999998656653   5667888887751        1123368999999


Q ss_pred             CCcEEEeCCCCCCCCeEEEEe--cChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNKELKGYVRVSV--GKPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~~~~~~iRis~--~~~~~~~~l~~al~~l  422 (423)
                      +||.+..   ....+++|++.  .+.++++.+.++|+.+
T Consensus       324 ~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~  359 (361)
T cd06452         324 RGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEI  359 (361)
T ss_pred             cCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHH
Confidence            9998633   23456899999  6888899999998864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.98  E-value=4.5e-30  Score=248.18  Aligned_cols=305  Identities=20%  Similarity=0.215  Sum_probs=225.0

Q ss_pred             CCCCCCCCHHHHHHHhcC-CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492          103 NENPYGPPPEVREALGQL-KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (423)
Q Consensus       103 ~~~~~~~~~~v~~al~~~-~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (423)
                      .+++++++|.+++++.+. .....| ++....++++.+++++|  ++++++++|+++++..++++++++||.|+++.|+|
T Consensus         4 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~   81 (338)
T cd06502           4 SDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAH   81 (338)
T ss_pred             cccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcc
Confidence            478899999999999873 222345 66678899999999999  55677777778999999999999999999999998


Q ss_pred             hhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492          181 TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (423)
Q Consensus       181 ~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~  247 (423)
                      ..+..   .++..|++++.++.+. +.+|++++++++.+      .++++|++++|+|| |.+++.+++++|++.    |
T Consensus        82 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~  159 (338)
T cd06502          82 IYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENG  159 (338)
T ss_pred             eeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcC
Confidence            65332   3455899999999754 68999999999863      27899999999997 667788887777653    8


Q ss_pred             CEEEEccCCcccc--CCCchhhhhccCCcEEEEccChhhhcccCccccc-cccCHHHHHHHHHhcC----CCCCcHHHHH
Q 014492          248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQ----PYNVSVAAEV  320 (423)
Q Consensus       248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~-i~~~~~~~~~l~~~~~----~~~~~~~~~~  320 (423)
                      +++|+||+|..+.  ..+........ +..+++.|+||.||++|   |+ ++.++++++.+.....    .++.+.+.+.
T Consensus       160 ~~livDea~~~~~~~~~~~~~~~~~~-~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (338)
T cd06502         160 LPLHLDGARLANAAAALGVALKTYKS-GVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAA  235 (338)
T ss_pred             CeEeechHHHHHHHHhcCCCHHHHHh-cCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHH
Confidence            9999999986442  11112222212 22356789999999887   54 5578899888876542    2456777888


Q ss_pred             HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC-CCHHHHHHHHH---hCCcEEEeCCCC
Q 014492          321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-MDAKKLKDDLA---KMGVMIRHYNNK  396 (423)
Q Consensus       321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-~~~~~l~~~L~---~~gI~v~~~~~~  396 (423)
                      ++..+|+...+. +..+++.++++++.+.|+++++ .+.++.++|+.++++.+ .....+.+.+.   ++|+.+.+..  
T Consensus       236 a~~~~L~~~~~~-~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~--  311 (338)
T cd06502         236 AGLAALENDLWL-RRLRHDHEMARRLAEALEELGG-LESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG--  311 (338)
T ss_pred             HHHHHhcCchHH-HHHHHHHHHHHHHHHHHHhcCC-CcccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC--
Confidence            888888775553 4557778888999999998875 55677889988887522 11223344443   6799998764  


Q ss_pred             CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          397 ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       397 ~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                        .+++||+++   +.++.+++.++++.
T Consensus       312 --~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         312 --EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             --CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence              289999998   56566666665543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.98  E-value=7.8e-30  Score=252.51  Aligned_cols=319  Identities=18%  Similarity=0.188  Sum_probs=239.8

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCC------CCC-C----cchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPY------IYP-D----PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~------~Y~-~----~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~  161 (423)
                      .++++|+.+.... .++.+++++.+. ....      .|. .    ...+++|+++++++|. ++++|++|+|++++++.
T Consensus        22 ~~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~  100 (406)
T PRK09295         22 LPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINL  100 (406)
T ss_pred             CceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence            3579999876543 567788887652 1101      111 0    1145899999999997 67899999999999999


Q ss_pred             HHHH----hcCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          162 IMRC----VLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       162 ~~~~----l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      ++.+    ++++||+|+++.+.|+    .+...++..|++++.++.+.++.+|++++++.+. +++++|++++|+||||.
T Consensus       101 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~l~~~~n~tG~  179 (406)
T PRK09295        101 VANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-ERTRLLAITHVSNVLGT  179 (406)
T ss_pred             HHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-CCcEEEEEecchhcccc
Confidence            9886    4688999999998885    3455667789999999987777899999999996 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh----
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----  308 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~----  308 (423)
                      ++|.+++.++++. |+++++|++|..+...   . .+...+..+++.|++|.+|.+|  +||++.++++++.+...    
T Consensus       180 ~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~  253 (406)
T PRK09295        180 ENPLAEMIALAHQHGAKVLVDGAQAVMHHP---V-DVQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG  253 (406)
T ss_pred             cCCHHHHHHHHHHcCCEEEEEcccccCccc---c-CchhcCCCEEEeehhhccCCCC--cEEEEEchHhHhhCCCcccCC
Confidence            9999999999987 9999999999754321   1 1223344588899999888666  79999998887654211    


Q ss_pred             --------------------cCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCce
Q 014492          309 --------------------KQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSN  364 (423)
Q Consensus       309 --------------------~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~  364 (423)
                                          ....+.+..+..++.++++..  ..++..+++.+++++++.+.|++++++.+..  ....
T Consensus       254 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~  333 (406)
T PRK09295        254 SMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG  333 (406)
T ss_pred             ceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce
Confidence                                011256666777777777542  1356777888999999999998887666532  2245


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+.+.++ +.+..++.+.|.++||.++.|..        .+.++++|+|+.   +.+|.+.|.++|+++
T Consensus       334 iv~~~~~-~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i  401 (406)
T PRK09295        334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRI  401 (406)
T ss_pred             EEEEEEC-CcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Confidence            6667776 46778898888899999987653        123568999976   677888888888765

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.97  E-value=1.1e-29  Score=251.05  Aligned_cols=320  Identities=17%  Similarity=0.168  Sum_probs=231.1

Q ss_pred             CCCCeeEcCCCC-CCCCCCHHHHHHHhcC--CCCCCCCC----cch----HHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANE-NPYGPPPEVREALGQL--KFPYIYPD----PES----RRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~Y~~----~g~----~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      .++++|+|..+. ..++++|++.+++.+.  ...+.|+.    .|.    .++++.+++++|.+ ++|++|+| ++++..
T Consensus        40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~  117 (397)
T PRK06939         40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGG  117 (397)
T ss_pred             CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHH
Confidence            467899999886 6788889988877762  22233321    233    46777788888864 78888888 668888


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---C--CceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++++++++||.|++++|+|+.+...++..|++++.++.     .|++++++.+++   .  ++++|++.+.+||+|...+
T Consensus       118 ~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~  192 (397)
T PRK06939        118 LFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP  192 (397)
T ss_pred             HHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence            88999999999999999999999888999999988863     478888887753   2  6778887788999999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccC--CCc-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSG--LES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~--~~~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      .+++.++|+. +++||+||+|.....  .+. ...... ..+.+++++|+||.++  |+|+||+++++++++.+.....+
T Consensus       193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~l~~~~~~  270 (397)
T PRK06939        193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVIDWLRQRSRP  270 (397)
T ss_pred             HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHHHHHHhCcc
Confidence            9999999987 999999999963221  111 112111 1245699999999884  56999999999999988765443


Q ss_pred             C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      +    +.++..+.++.++++..+..++.+++++++++++.+.|+++++ ...+..+.++++.++.+.+..++++.|.++|
T Consensus       271 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g  349 (397)
T PRK06939        271 YLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAGF-TLGPGEHPIIPVMLGDAKLAQEFADRLLEEG  349 (397)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence            2    2234445555555543222357788899999999999988753 3334445555555654456788999999889


Q ss_pred             cEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.+.+...+   ...++|||+++...+.+++.+++++|
T Consensus       350 I~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L  387 (397)
T PRK06939        350 VYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAF  387 (397)
T ss_pred             ceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHH
Confidence            999864321   23468999986433346666666654

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.97  E-value=3.2e-29  Score=247.64  Aligned_cols=312  Identities=19%  Similarity=0.157  Sum_probs=227.3

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC-C-C----CCCCCCc-c----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQL-K-F----PYIYPDP-E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~-~----~~~Y~~~-g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      .++|+.+.... +++.+++++.+. . .    ...|+.. +    .+++|+.+++++|.++++|++++|+++++..++.+
T Consensus        18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~   96 (397)
T TIGR01976        18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA   96 (397)
T ss_pred             eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence            58888765543 567788877652 1 1    1235432 2    46899999999999877899999999999888776


Q ss_pred             h---cCCCCeEEEcCCCchhh----HHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          166 V---LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       166 l---~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      +   +++||+|++..|.|...    ...++..|++++.++.+. ++.+|++++++.+. +++++|++++|+||||.+++.
T Consensus        97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~  175 (397)
T TIGR01976        97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-PRTRLVAVTAASNTLGSIVDL  175 (397)
T ss_pred             HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-CCceEEEEeCCCCCCCccCCH
Confidence            5   68999999999988643    355677899999999754 67899999999997 689999999999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC----
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----  312 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~----  312 (423)
                      +++.++++. |+++++|+++....   .. ..+...+..+++.|++|.+|   .|+||+++++++++.+......+    
T Consensus       176 ~~i~~~~~~~~~~~ivD~a~~~~~---~~-~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~  248 (397)
T TIGR01976       176 AAITELVHAAGALVVVDAVHYAPH---GL-IDVQATGADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDT  248 (397)
T ss_pred             HHHHHHHHHcCCEEEEehhhhccc---cC-CCHHHcCCCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCC
Confidence            999999987 99999999985321   11 11223344577789999764   46899999999887765433221    


Q ss_pred             --------CCcHHHHHHH---HHHhCChH-------------HHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----Cc
Q 014492          313 --------NVSVAAEVAA---CAALQNPI-------------YLEKVKEALIKERERLFKLLKDVPFLNPYPS-----YS  363 (423)
Q Consensus       313 --------~~~~~~~~a~---~~~l~~~~-------------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~  363 (423)
                              +.+.....++   ...+....             ++++.+++..+.++++.+.|++++.+.+.++     .+
T Consensus       249 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~  328 (397)
T TIGR01976       249 GPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARV  328 (397)
T ss_pred             CcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCC
Confidence                    2333333333   33332211             3567788888899999999998875655332     56


Q ss_pred             eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----------CCCCeEEEEe---cChhhHHHHHHH
Q 014492          364 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----------ELKGYVRVSV---GKPEHTDALMEC  418 (423)
Q Consensus       364 ~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-----------~~~~~iRis~---~~~~~~~~l~~a  418 (423)
                      +++.+.++ +.+..++.++|.++||.++.+...           ...+++|||+   .+.++++++.++
T Consensus       329 ~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~  396 (397)
T TIGR01976       329 PTVSFTVH-GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEA  396 (397)
T ss_pred             ceEEEEeC-CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHh
Confidence            78888776 567889999999999999976431           2346899999   455555555543

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.97  E-value=2.1e-29  Score=250.73  Aligned_cols=319  Identities=21%  Similarity=0.239  Sum_probs=239.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-C---CCC---CCCc----chHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-F---PYI---YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~---~~~---Y~~~----g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~  161 (423)
                      .++++|+.+... ++++.+.+++.+. . .   ...   |...    ..+++|+.+++++|.+ +++|++|+|++++++.
T Consensus        31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~  109 (424)
T PLN02855         31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL  109 (424)
T ss_pred             CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence            457999986654 4667888887652 1 1   111   1111    1458999999999985 5899999999999999


Q ss_pred             HHHHh----cCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          162 IMRCV----LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      +++.+    +++||+|++..+.|+    .+...++..|++++.++.+.++.+|++++++.+. +++++|++++|+||||.
T Consensus       110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~  188 (424)
T PLN02855        110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS-EKTKLVATHHVSNVLGS  188 (424)
T ss_pred             HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEeCccccccc
Confidence            98863    688999999999886    3555667789999999976666799999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc---
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---  309 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~---  309 (423)
                      ++|.++|.++|+. |+++++|++|....   ... .+...+..+++.|++|.+|.+|  +||+++++++++.+....   
T Consensus       189 ~~~~~~I~~l~~~~g~~vivD~a~~~g~---~~~-~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~p~~~g~  262 (424)
T PLN02855        189 ILPVEDIVHWAHAVGAKVLVDACQSVPH---MPV-DVQTLGADFLVASSHKMCGPTG--IGFLWGKSDLLESMPPFLGGG  262 (424)
T ss_pred             cCCHHHHHHHHHHcCCEEEEEhhhhcCC---cCC-CchhcCCCEEEeecccccCCCc--cEEEEEchhhhhcCCCEecCC
Confidence            9999999999987 99999999996322   111 1223344588999999777555  899999988877653220   


Q ss_pred             --------------------CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-------
Q 014492          310 --------------------QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-------  360 (423)
Q Consensus       310 --------------------~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-------  360 (423)
                                          ...+.+.....++..+++.  ...+++.+++.++.++++.+.|++++++.+..       
T Consensus       263 ~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~  342 (424)
T PLN02855        263 EMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGV  342 (424)
T ss_pred             CceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccccc
Confidence                                0123445555555666643  23467888899999999999998886666542       


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHHhC-CcEEEeCCC--------CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          361 SYSNFILCEVTSGMDAKKLKDDLAKM-GVMIRHYNN--------KELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~~~~--------~~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      ..++++.+.++ +.+..++.+.|.++ ||.++.+..        .+.++++|||+   .+.+|+++|.++|+.+
T Consensus       343 ~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~  415 (424)
T PLN02855        343 GRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDT  415 (424)
T ss_pred             CcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            12467888887 56788999999866 999997652        13357899998   6788888888888754

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.97  E-value=1.2e-28  Score=239.24  Aligned_cols=316  Identities=20%  Similarity=0.157  Sum_probs=227.1

Q ss_pred             eeEcCCCC-CCCCCCHHHHHHHhcC-C-CCC---CC----C-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           97 IVKIDANE-NPYGPPPEVREALGQL-K-FPY---IY----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        97 ~i~l~~~~-~~~~~~~~v~~al~~~-~-~~~---~Y----~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      +++|+.++ -..+.+|++.+++.+. . +..   .|    . .+...++++.++++++.+ +.++++ ++++++..+++.
T Consensus         3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~~iv~~-sg~~a~~~~~~~   80 (349)
T cd06454           3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-AALVFS-SGYAANDGVLST   80 (349)
T ss_pred             ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-CEEEec-cHHHHHHHHHHH
Confidence            46676653 2345579999988773 2 111   12    1 223578999999999964 455554 456687777888


Q ss_pred             hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc----CCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++++||.|+++.|+|..+...++..|++++.++     .+|++.+++.+++    .+++++++++++||||...+.+++.
T Consensus        81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~  155 (349)
T cd06454          81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFK-----HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV  155 (349)
T ss_pred             hcCCCCEEEEehhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence            889999999999999988888888999998886     2477888888864    4578888889999999999999999


Q ss_pred             HHHcC-CCEEEEccCCccccCCC--chhhh--hccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----C
Q 014492          242 KILEM-PILVVLDEAYTEFSGLE--SRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y  312 (423)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~--~~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~  312 (423)
                      ++|+. |+++|+|++|.......  .....  ....+.+++++|+||.++.+|   ||++.++++++.+......    .
T Consensus       156 ~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~  232 (349)
T cd06454         156 DLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFST  232 (349)
T ss_pred             HHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccC
Confidence            99998 99999999997533211  11111  123467899999999998655   9999999988887665432    2


Q ss_pred             CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492          313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  392 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~  392 (423)
                      ..++..+.++.++++.....+..+++++++++.+.+.|++++.....+.++.+.++.++++.+..++.+.|.++||.+++
T Consensus       233 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~  312 (349)
T cd06454         233 SLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQA  312 (349)
T ss_pred             CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEE
Confidence            45666677777777543224667888999999999999887543333334444445444345678899999988999987


Q ss_pred             CCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          393 YNNK---ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       393 ~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      +...   ...+++||+++   +.++++++.++|+.+
T Consensus       313 ~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         313 IRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             ecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            5431   22579999986   555666666666543

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.97  E-value=6.5e-29  Score=243.89  Aligned_cols=316  Identities=17%  Similarity=0.198  Sum_probs=222.4

Q ss_pred             CCCCeeEcCCC--CCCCCCC-HHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           93 KPEDIVKIDAN--ENPYGPP-PEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        93 ~~~~~i~l~~~--~~~~~~~-~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      .+..+|||.++  .+.++.. |.+.+++.+ +..    ...|+.+...+|++++++++|.  +++++++|+++++..+++
T Consensus        25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~~~~sg~~a~~~a~~  102 (379)
T TIGR00707        25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGA--DRVFFCNSGAEANEAALK  102 (379)
T ss_pred             CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHH
Confidence            45678999886  4566654 888887765 221    2446666678999999999986  499999999999999888


Q ss_pred             Hh---cC----CCCeEEEcCCCchhhHHHHHHCCCeEEE----ecCCCCCCC----CHHHHHHHhhcCCceEEEEcCCCC
Q 014492          165 CV---LD----PGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDFSL----NVELIADAVEREKPKCIFLTSPNN  229 (423)
Q Consensus       165 ~l---~~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~~~----d~~~l~~~i~~~~~~~i~l~~p~N  229 (423)
                      .+   ..    +||+|++++|+|+.+...+...+.....    .+...++..    |++++++.+. .++++|++++++|
T Consensus       103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~p~~~  181 (379)
T TIGR00707       103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-DETAAVIVEPIQG  181 (379)
T ss_pred             HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-hCeeEEEEEcccc
Confidence            54   22    3799999999998877776665554321    222222222    8999999986 5789999987778


Q ss_pred             CcCcC-CCHHHHHHH---HcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492          230 PDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (423)
Q Consensus       230 PtG~~-~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~  302 (423)
                      |+|.. ++.+++++|   |+. ++++|+||+|.+|.+.+...  ......++++   +|||.++ +|+|+||++++++++
T Consensus       182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~riG~~~~~~~~~  257 (379)
T TIGR00707       182 EGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII---TLAKGLG-GGVPIGATLAKEEVA  257 (379)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE---EEccccc-CCcccEEEEEcHHHH
Confidence            88864 566665555   444 99999999999876543221  1222233333   6899999 999999999999999


Q ss_pred             HHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC---CeecCCCceEEEEEeCCCCCHH
Q 014492          303 EYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF---LNPYPSYSNFILCEVTSGMDAK  377 (423)
Q Consensus       303 ~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~~~~~~~~~~~~~~~~  377 (423)
                      +.+....  ..++.++++|.++.++|+..+ ..+..++++++++++.+.|+++..   ....+..|+|+|+++++  +..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~--~~~  334 (379)
T TIGR00707       258 EAFTPGDHGSTFGGNPLACAAALAVLEVIE-KERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA--PCK  334 (379)
T ss_pred             hhhcCCCCCCCCCCCHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC--cHH
Confidence            8887633  347788999999998886322 124556667777777777665321   11234578899999863  478


Q ss_pred             HHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.+.|.++||.+.+.+    .+++||+++...+.+++.+++++|
T Consensus       335 ~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l  375 (379)
T TIGR00707       335 DIVKKALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSAL  375 (379)
T ss_pred             HHHHHHHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHH
Confidence            89999999999999864    479999964322234455555443

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK07179 hypothetical protein; Provisional

Probab=99.97  E-value=3e-28  Score=241.24  Aligned_cols=317  Identities=17%  Similarity=0.149  Sum_probs=232.9

Q ss_pred             CCCCeeEcCCC-CCCCCCCHHHHHHHhcC-C-C------CCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDAN-ENPYGPPPEVREALGQL-K-F------PYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~------~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ++..+++|+.+ .-++..+|++++++.+. . +      ...|  +.....+|++.+++++|.+  .+++++|+++++..
T Consensus        52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~--~~~~~~sG~~An~~  129 (407)
T PRK07179         52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFE--SCLLCQSGWAANVG  129 (407)
T ss_pred             CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHH
Confidence            45678899776 56677889998887652 1 1      1122  2234678999999999963  56789999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++++++.+||.|++..+.|......++..|++++.++     ..|++++++.+++.++++|++++|+||||.+.|.+++.
T Consensus       130 ~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~  204 (407)
T PRK07179        130 LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-----HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV  204 (407)
T ss_pred             HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEec-----CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence            9999999999999999999887777788898887765     35899999999744688899999999999999999999


Q ss_pred             HHHcC-CCEEEEccCCccccCCCch---hhhhccC-CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--C--
Q 014492          242 KILEM-PILVVLDEAYTEFSGLESR---MEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y--  312 (423)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~~-~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~--  312 (423)
                      ++|+. |+++|+||+|..+..+...   ....+.. ..++++.|+||.+|   .|+||+++++++++.+.....+  +  
T Consensus       205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~~~~~~~~~~~~~  281 (407)
T PRK07179        205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEYVPFVSYPAIFSS  281 (407)
T ss_pred             HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHHHHHhCcCeeeCC
Confidence            99987 9999999999854332221   2122211 22588999999886   2689999999988877655433  2  


Q ss_pred             CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492          313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  392 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~  392 (423)
                      +.++....++.++++..+..++.+++++++++++.+.|++++ +.+. +.++++++.++...+...+.+.|.++||.+..
T Consensus       282 t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g-~~v~-~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~  359 (407)
T PRK07179        282 TLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG-YNIR-SESQIIALETGSERNTEVLRDALEERNVFGAV  359 (407)
T ss_pred             CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEee
Confidence            334444444445554333345677889999999999999885 3444 45788888875333557788889999998654


Q ss_pred             CCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          393 YNN---KELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       393 ~~~---~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ...   +...+++||+++   +.++++++.++|+.
T Consensus       360 ~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~  394 (407)
T PRK07179        360 FCAPATPKNRNLIRLSLNADLTASDLDRVLEVCRE  394 (407)
T ss_pred             ecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence            322   234679999998   66667777666654

>PLN02822 serine palmitoyltransferase

Probab=99.97  E-value=2.6e-28  Score=244.70  Aligned_cols=320  Identities=17%  Similarity=0.157  Sum_probs=235.2

Q ss_pred             CCCCeeEcCCC-CCCCCCCHHHHHHHhc-C-CCCCC-------C-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDAN-ENPYGPPPEVREALGQ-L-KFPYI-------Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~-~-~~~~~-------Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      .++++++|..+ ...+..+|++.+++.+ + .++.+       | +.....+|+++|+++++. ++.|++++|.+ ++..
T Consensus       107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-~~~i~~s~G~~-a~~s  184 (481)
T PLN02822        107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-PDSILYSYGLS-TIFS  184 (481)
T ss_pred             CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-CCEEEECCHHH-HHHH
Confidence            45788999877 4467778999888776 2 22222       3 223478999999999994 57899999888 5677


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh---c-----CCc-eEEEEcCCCCCcC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---R-----EKP-KCIFLTSPNNPDG  232 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~-----~~~-~~i~l~~p~NPtG  232 (423)
                      ++.+++++||.|++....|..+...++..|.+++.++.+     |.+.++..++   +     .++ ++|++++++|+||
T Consensus       185 ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G  259 (481)
T PLN02822        185 VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSG  259 (481)
T ss_pred             HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCC
Confidence            888899999999988888788877888899999999843     3334433332   1     234 6888889999999


Q ss_pred             cCCCHHHHHHHHcC-CCEEEEccCCccccCCCch---hhhhc--cCCcEEEEccChhhhcccCccccccccCHHHHHHHH
Q 014492          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (423)
Q Consensus       233 ~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~  306 (423)
                      .+.+.+++.+|++. |+++|+||+|..+..+...   ....+  ..+.+++++||||.+|+.|   ||+++++++++.+.
T Consensus       260 ~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~  336 (481)
T PLN02822        260 QIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQR  336 (481)
T ss_pred             CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHH
Confidence            99999999999987 9999999999966543221   12221  1355789999999999889   99999999999887


Q ss_pred             HhcCC--CC--CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCC-----C-
Q 014492          307 RAKQP--YN--VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-----D-  375 (423)
Q Consensus       307 ~~~~~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~-----~-  375 (423)
                      .....  |+  .++..+.++.++|+..+...+.+++++++++++.+.|+++.++.+ .+++++++++.+++..     + 
T Consensus       337 ~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~  416 (481)
T PLN02822        337 LSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDL  416 (481)
T ss_pred             hcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchH
Confidence            65443  33  346777888788864333357888999999999999998744443 4678889999986321     1 


Q ss_pred             --HHHHHHHHH-hCCcEEEeCCC--C---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          376 --AKKLKDDLA-KMGVMIRHYNN--K---ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       376 --~~~l~~~L~-~~gI~v~~~~~--~---~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                        ..++++.|. ++||.+.++..  +   ..+.++||+++...+.++|.+++++|
T Consensus       417 ~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l  471 (481)
T PLN02822        417 SLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESL  471 (481)
T ss_pred             HHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHH
Confidence              357889987 88999997543  1   12458999987544445566655554

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.97  E-value=2.5e-28  Score=240.26  Aligned_cols=320  Identities=16%  Similarity=0.145  Sum_probs=226.8

Q ss_pred             CCCCCeeEcCCCC-CCCCCCHHHHHHHhcC-C-CC---CCCC-Ccch----HHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDANE-NPYGPPPEVREALGQL-K-FP---YIYP-DPES----RRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~~-~~~~~~~~v~~al~~~-~-~~---~~Y~-~~g~----~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ..+++++||+.++ ..++++|.+.+++.+. . ..   ..|. ..|.    .++++.+++++|. ++.|++++|++ ++.
T Consensus        30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~~-a~~  107 (385)
T TIGR01825        30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGFN-TNQ  107 (385)
T ss_pred             ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHHH-HHH
Confidence            3467899999886 5777888888877652 1 21   2242 2243    4555566666674 46788888855 566


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .++..++++||.|+++.|+|..+...++..|++++.++     .+|++++++.+.+   .++++|++++++||||.+.+.
T Consensus       108 ~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~  182 (385)
T TIGR01825       108 GVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPL  182 (385)
T ss_pred             HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCH
Confidence            78888899999999999999988888888888887764     5788888887753   368888888999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCC--c-hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLE--S-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY  312 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~--~-~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~  312 (423)
                      +++.++|+. |+++|+||+|..+..+.  . .....+ ..+.+++++||||.+|++|   ||+++++++++.+......+
T Consensus       183 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~  259 (385)
T TIGR01825       183 PEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKNRARPF  259 (385)
T ss_pred             HHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHHhCccc
Confidence            999999987 99999999998764321  1 111111 2567899999999998766   99999999999887654432


Q ss_pred             ----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014492          313 ----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV  388 (423)
Q Consensus       313 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI  388 (423)
                          ..++..+.++.++++......+..++++++++++.+.|++++ +.+.++.++++.+.++...+..++++.|.++||
T Consensus       260 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi  338 (385)
T TIGR01825       260 LFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKLG-YDTGGSETPITPVVIGDEKAAQEFSRRLFDEGI  338 (385)
T ss_pred             cccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCc
Confidence                235566777777775321123466777888999999998875 344445556777666533356789999998899


Q ss_pred             EEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          389 MIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++....   ..+.++||+++....+.+++.+++++|
T Consensus       339 ~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l  375 (385)
T TIGR01825       339 FAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAY  375 (385)
T ss_pred             EEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence            9865433   224478999875322234455444443

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=2.6e-28  Score=239.13  Aligned_cols=282  Identities=18%  Similarity=0.171  Sum_probs=214.5

Q ss_pred             hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcC---CCCeEEEcCCCchhh----HHHHHHCCCeEEEecCCCC
Q 014492          131 SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~  202 (423)
                      ..++|+.+++++|.+ +++|++|+|+++++..++.++..   +||+|++++++|+..    ...++..|++++.++.+.+
T Consensus        45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~  124 (373)
T cd06453          45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD  124 (373)
T ss_pred             HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence            457999999999987 78999999999999999999887   899999999999763    3455578999999998777


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      +.+|++++++.+. +++++|++++|+||||.+.+.+++.++|+. |+++++|++|......   . .....+..+++.|+
T Consensus       125 ~~~d~~~l~~~l~-~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~---~-~~~~~~~d~~~~s~  199 (373)
T cd06453         125 GQLDLEALEKLLT-ERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP---V-DVQDLGCDFLAFSG  199 (373)
T ss_pred             CCcCHHHHHHHhc-CCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee---e-eccccCCCEEEecc
Confidence            7899999999997 589999999999999999999999999987 9999999998743211   1 11122345777899


Q ss_pred             hhhhcccCccccccccCHHHHHHHHHhcCC-----------------------CCCcHHHHHHHHHHhCC--hHHHHHHH
Q 014492          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-----------------------YNVSVAAEVAACAALQN--PIYLEKVK  336 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-----------------------~~~~~~~~~a~~~~l~~--~~~~~~~~  336 (423)
                      +|.++.  .++|++++++++++.+......                       .+++.....++.++++.  ...+++++
T Consensus       200 ~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~  277 (373)
T cd06453         200 HKMLGP--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIA  277 (373)
T ss_pred             ccccCC--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHH
Confidence            998874  5689999999888776543210                       13444445454554542  12357778


Q ss_pred             HHHHHHHHHHHHHHccCCCCeecC---CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEE
Q 014492          337 EALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVS  405 (423)
Q Consensus       337 ~~~~~~~~~l~~~L~~~~~~~~~p---~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis  405 (423)
                      ++.+++++++.+.|++++++.+.+   ..++++++.++ +.+..++.+.|.++||.+.++..        .+.+++|||+
T Consensus       278 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis  356 (373)
T cd06453         278 AHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE-GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRAS  356 (373)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC-CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEE
Confidence            888899999999999887666532   24667888886 46788999999999999986653        2236799999


Q ss_pred             ecChhhHHHHHHHHh
Q 014492          406 VGKPEHTDALMECLM  420 (423)
Q Consensus       406 ~~~~~~~~~l~~al~  420 (423)
                      ++...+.+++++.++
T Consensus       357 ~~~~~t~~di~~~~~  371 (373)
T cd06453         357 FGLYNTEEEIDALVE  371 (373)
T ss_pred             ecCCCCHHHHHHHHh
Confidence            983333344554444

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PLN02483 serine palmitoyltransferase

Probab=99.97  E-value=3.9e-28  Score=243.87  Aligned_cols=319  Identities=17%  Similarity=0.172  Sum_probs=226.0

Q ss_pred             CCCeeEcCCCC-CCCC-----CCHHHHHHHhcCCC---C--CCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           94 PEDIVKIDANE-NPYG-----PPPEVREALGQLKF---P--YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        94 ~~~~i~l~~~~-~~~~-----~~~~v~~al~~~~~---~--~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+.++|+++. -.+.     +.+.+.+++.+...   +  ..|+ .....++++++|+++| .++.|++++|....+ .
T Consensus        99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~an~-~  176 (489)
T PLN02483         99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYATNS-T  176 (489)
T ss_pred             CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHHH-H
Confidence            45678887652 2333     23567777776432   1  2364 4468899999999999 567888888866544 6


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CCc-----eEEEEc-CCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCIFLT-SPNN  229 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~~-----~~i~l~-~p~N  229 (423)
                      ++.+++++||.|++++|+|..+...++..|++++.++.+     |++++++.+++      +++     ++++++ +..|
T Consensus       177 ~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s  251 (489)
T PLN02483        177 IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS  251 (489)
T ss_pred             HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence            777799999999999999999999999999999999842     45555554431      222     555555 6679


Q ss_pred             CcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc---hhhh--hccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       230 PtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      ++|.+.+.+++.++++. ++++|+||+|+....+..   ....  +...+.+|+++||||+||+.|   ||+++++++++
T Consensus       252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~li~  328 (489)
T PLN02483        252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKELIQ  328 (489)
T ss_pred             CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHHHH
Confidence            99999999999999997 999999999985432221   1222  222466899999999999887   99999999999


Q ss_pred             HHHHhcCC--C--CCcHHHHHHHHHHhC-----C-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC
Q 014492          304 YLWRAKQP--Y--NVSVAAEVAACAALQ-----N-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG  373 (423)
Q Consensus       304 ~l~~~~~~--~--~~~~~~~~a~~~~l~-----~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~  373 (423)
                      .+......  +  ..++....++.++|+     + .++..+.+++++++++++.+.|+++++....+.++..+++.+...
T Consensus       329 ~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~  408 (489)
T PLN02483        329 YLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP  408 (489)
T ss_pred             HHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCH
Confidence            99876432  2  234444334444442     2 234566788899999999999999864322344556777766533


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+..++.+.|+++||.+.+...   +...+.+||+++...+.+++++++++|
T Consensus       409 ~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L  460 (489)
T PLN02483        409 AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVI  460 (489)
T ss_pred             HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            4567899999999999986433   233578999997544446666666654

>PRK07049 methionine gamma-lyase; Validated

Probab=99.97  E-value=3.2e-28  Score=240.43  Aligned_cols=282  Identities=17%  Similarity=0.212  Sum_probs=209.1

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~  199 (423)
                      .+|+++....|+++||++.|.  +++++++|+++++..++.+++++||.|+++.|+|..+...+    +..|++++.++.
T Consensus        78 ~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~  155 (427)
T PRK07049         78 SRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD  155 (427)
T ss_pred             cCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence            568999889999999999984  46778888888999999999999999999999999886653    457999888872


Q ss_pred             CCCCCCCHHHHHHHhh----cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEEccCCccccCCCchhhh
Q 014492          200 KSDFSLNVELIADAVE----REKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSGLESRMEW  268 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~----~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~Deay~~~~~~~~~~~~  268 (423)
                          ..|++++++.+.    ++++|+|++++|+||||.+++.+++.+|++.       ++++|+||+|..+.... +.  
T Consensus       156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-pl--  228 (427)
T PRK07049        156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-PL--  228 (427)
T ss_pred             ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC-cc--
Confidence                356777776663    2579999999999999999999999999875       68999999987544221 11  


Q ss_pred             hccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhcCCC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 014492          269 VKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLEKVKEALIKERER  345 (423)
Q Consensus       269 ~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  345 (423)
                        ..+..+++.|+||.+| .+|+|+||+++++++++.+...+..+  .++++.+.++...|+   .+..+.++..++++.
T Consensus       229 --~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~---tl~~R~~~~~~~a~~  303 (427)
T PRK07049        229 --EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLE---TLVLRMERANRNARA  303 (427)
T ss_pred             --ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---hHHHHHHHHHHHHHH
Confidence              2345689999999998 69999999999999999888776654  478888888777775   355556677899999


Q ss_pred             HHHHHccCCCCe--ecCC------------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC---------
Q 014492          346 LFKLLKDVPFLN--PYPS------------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN---------  395 (423)
Q Consensus       346 l~~~L~~~~~~~--~~p~------------------~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~---------  395 (423)
                      +.+.|++.+.+.  .+|+                  .|..+.+++.++ .....|++.|.=-++.+.-|+.         
T Consensus       304 la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~  383 (427)
T PRK07049        304 VAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPAS  383 (427)
T ss_pred             HHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCc
Confidence            999999876543  2342                  244667777532 2234555555421221221110         


Q ss_pred             --------------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          396 --------------KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       396 --------------~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                                    .-.++.||||++.++ .|+|.+-|+
T Consensus       384 ~~h~~~~~~~~~~~gi~~~liR~svGlE~-~~dl~~dl~  421 (427)
T PRK07049        384 MTHSGVPADVRERIGVLESTIRLSIGIEH-PDDLIADLA  421 (427)
T ss_pred             cccccCCHHHHHhcCCCcCeEEEEeCcCC-HHHHHHHHH
Confidence                          012468999999865 466655544

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.97  E-value=6e-28  Score=239.17  Aligned_cols=318  Identities=19%  Similarity=0.160  Sum_probs=229.8

Q ss_pred             CCCeeEcCCC-CCCCCCCHHHHHHHhc-CC-CCC-------CC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ++++++|+++ +..++++|++.+++.+ +. ++.       .| +++...+|++++++++|. ++.+++++|+ ++...+
T Consensus        45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG~-~an~~a  122 (407)
T PRK09064         45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSGY-VSNDAT  122 (407)
T ss_pred             CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHHH
Confidence            3568899766 5678889999988876 21 111       13 344577899999999994 5667777765 566666


Q ss_pred             HHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492          163 MRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       163 ~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      +..++.  +++.|+.....|......++..|+++..++.     .|++++++.++.   +++++|++++|+||+|.+.+.
T Consensus       123 i~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l  197 (407)
T PRK09064        123 LSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPI  197 (407)
T ss_pred             HHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCH
Confidence            665554  6777776666676666667778888776662     367777777752   468899999999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCC--Cchh-hhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGL--ESRM-EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY  312 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~--~~~~-~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~  312 (423)
                      +++.++|+. |+++|+||+|....++  +... ...+. .+.+++++||||.||++|   ||+++++++++.+.....++
T Consensus       198 ~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~~l~~~~~~~  274 (407)
T PRK09064        198 AEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVDAVRSYAPGF  274 (407)
T ss_pred             HHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHHHHHHhCccc
Confidence            999999997 9999999999743222  2121 11111 234788999999999888   99999999999887665443


Q ss_pred             ----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCC
Q 014492          313 ----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMG  387 (423)
Q Consensus       313 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~g  387 (423)
                          +.++.++.++.++++..+.....+++++++++++.+.|+++++ .+.++.++|+++.+++..++.++.+.|. ++|
T Consensus       275 ~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~g  353 (407)
T PRK09064        275 IFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAGI-PVMPNESHIVPVMVGDPEKCKKASDMLLEEHG  353 (407)
T ss_pred             cccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence                4566677777777654222234467888999999999998763 4455678888888753345678888887 569


Q ss_pred             cEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      |.+++...+   .+.+++||+++   +.++++++.++|+++
T Consensus       354 i~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~  394 (407)
T PRK09064        354 IYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV  394 (407)
T ss_pred             EEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            999875442   23478999998   777788888877653

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.97  E-value=1.1e-27  Score=233.08  Aligned_cols=308  Identities=13%  Similarity=0.117  Sum_probs=229.7

Q ss_pred             CCCCCCHHHHHHHhcCCCCCC---CCCcchHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC-
Q 014492          105 NPYGPPPEVREALGQLKFPYI---YPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP-  178 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~---Y~~~g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p-  178 (423)
                      .|..+++.+.+++.. ...++   |+ .-..++|+.+++++|++++  .|++++|+++++..++..++.+||++++..+ 
T Consensus         6 ~p~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~   83 (355)
T TIGR03301         6 GPLSTSATVRDAMLV-DWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLING   83 (355)
T ss_pred             CCCCCCHHHHHHhhh-hccCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCC
Confidence            355667889999876 22222   33 2367899999999999765  5778999999999999999888887665554 


Q ss_pred             Cchh-hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492          179 TFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       179 ~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea  255 (423)
                      .|+. +...++..|.+++.++.++++.+|++++++.+.+ .+++++++++++||||.+.+.+++.++|+. ++++|+|++
T Consensus        84 ~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~  163 (355)
T TIGR03301        84 AYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAM  163 (355)
T ss_pred             chhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEec
Confidence            5543 5667788999999999877789999999999864 356788888999999999999999999987 999999987


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHh-------------------cCCCCCc
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA-------------------KQPYNVS  315 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~-------------------~~~~~~~  315 (423)
                      ++.... +  . .+...+..++++|++|.+ |++|  +||+++++++++.+...                   ...++++
T Consensus       164 ~s~g~~-~--~-~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~  237 (355)
T TIGR03301       164 SSFGAI-P--I-DIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPP  237 (355)
T ss_pred             cccCCc-c--c-chhhcCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCc
Confidence            764321 1  1 122345668899999976 5556  69999999988876521                   1234667


Q ss_pred             HHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCCC--CCHHHHHHHHHhCC
Q 014492          316 VAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSG--MDAKKLKDDLAKMG  387 (423)
Q Consensus       316 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~~--~~~~~l~~~L~~~g  387 (423)
                      ...+.++..+++.   ..++++..++++++++++.+.|+++++..+.+.   .+.++++.+|+.  .+.+++.+.|.++|
T Consensus       238 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  317 (355)
T TIGR03301       238 THTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERG  317 (355)
T ss_pred             HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCC
Confidence            7777776666653   223677888899999999999988864323332   345678888743  45678999999999


Q ss_pred             cEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          388 VMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       388 I~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      |.+.++.... .+++||++.   +.++++++.++|+.
T Consensus       318 i~i~~~~~~~-~~~iRis~~~~~~~~~i~~~~~~l~~  353 (355)
T TIGR03301       318 FVIYPGKLTL-ADTFRIGTIGEIDAADIERLLEAIKD  353 (355)
T ss_pred             EEEECCcccc-ccEEEEecCCCCCHHHHHHHHHHHHh
Confidence            9999876432 379999974   56666777766654

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.97  E-value=1.5e-27  Score=235.85  Aligned_cols=317  Identities=21%  Similarity=0.209  Sum_probs=227.5

Q ss_pred             CCeeEcCCC-CCCCCCCHHHHHHHhcC-C-CCC-------CCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDAN-ENPYGPPPEVREALGQL-K-FPY-------IYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~~~-------~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      +++++|+.| +..++.+|++++++.+. . ++.       .|. .+...+|++.+++++|. ++.+++++| ++++..++
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~~~l~~~sG-~~an~~ai  122 (402)
T TIGR01821        45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-ESALVFTSG-YVANDATL  122 (402)
T ss_pred             eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-CeEEEECch-HHHHHHHH
Confidence            557888765 67788999999888762 1 221       122 23467899999999994 445555555 67777888


Q ss_pred             HHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHH
Q 014492          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ..+..  +++.|+.....|......++..|+++..++.     .|++++++.++.   .++++|++++|+||||.+.+.+
T Consensus       123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~  197 (402)
T TIGR01821       123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIE  197 (402)
T ss_pred             HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence            87765  6777776666777666777778888776652     366777776642   3678999999999999999999


Q ss_pred             HHHHHHcC-CCEEEEccCCccccCCCch---hhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492          239 DLLKILEM-PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (423)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~-  312 (423)
                      ++.++|+. |+++|+||+|....+++..   ....+. .+.+++++||||+||++|   ||+++++++++.+.....++ 
T Consensus       198 ~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~l~~~~~~~~  274 (402)
T TIGR01821       198 EICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAIRSYAPGFI  274 (402)
T ss_pred             HHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHHHHHhCcCce
Confidence            99999987 9999999999843322211   111111 123688899999999888   99999999999887655443 


Q ss_pred             ---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCc
Q 014492          313 ---NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGV  388 (423)
Q Consensus       313 ---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI  388 (423)
                         +.++.++.++.++|+..+.....+++++++++++.+.|+++++ .+.++.++++.+.++....+.++.+.|. ++||
T Consensus       275 ~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi  353 (402)
T TIGR01821       275 FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGI-PVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGI  353 (402)
T ss_pred             ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCE
Confidence               4677788888888765322245566777889999999988763 4455677888887753234677888887 5699


Q ss_pred             EEEeCCC---CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          389 MIRHYNN---KELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~---~~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      .+++...   +.+.+++||++   .+.++++++.++|+++
T Consensus       354 ~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~  393 (402)
T TIGR01821       354 YVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLV  393 (402)
T ss_pred             EEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            9987543   23457999998   4667777777777653

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.96  E-value=3.5e-28  Score=240.15  Aligned_cols=318  Identities=18%  Similarity=0.197  Sum_probs=219.6

Q ss_pred             CCCCCeeEcCCC--CCCCCC-CHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+++++||+..+  .+.+++ +|.+.+++.+. ..    ...|+.+...++.+.++++.+.  +++++++|+++++..++
T Consensus        36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al  113 (396)
T PRK02627         36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM--DKVFFCNSGAEANEAAI  113 (396)
T ss_pred             CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHH
Confidence            456788999876  445666 58888888762 21    1335555566788888887664  79999999999999999


Q ss_pred             HHhcCCC-------CeEEEcCCCchhhHHHHHHCCCeE-E---EecCCCCC----CCCHHHHHHHhhcCCceEEEEcCCC
Q 014492          164 RCVLDPG-------DKIVDCPPTFTMYEFDAAVNGAAV-V---KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPN  228 (423)
Q Consensus       164 ~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~g~~~-~---~v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~  228 (423)
                      +.+...+       ++|++..++|+.+...+...+... .   ..+...++    ..|++++++.+. +++++|++++++
T Consensus       114 ~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~  192 (396)
T PRK02627        114 KLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQ  192 (396)
T ss_pred             HHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEeccc
Confidence            9665433       679999999987765554433222 1   11221221    228999999996 689999999999


Q ss_pred             CCcC-cCCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          229 NPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       229 NPtG-~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      ||+| .+++.+.+++|.+.    |+++|+||+|.+|...+..  ....+..++   +.||||.++ +|+|+||+++++++
T Consensus       193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~~~~~~  268 (396)
T PRK02627        193 GEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD---IMTLAKGLG-GGVPIGAVLAKEKV  268 (396)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC---EEEEcchhh-CCcccEEEEEcHHH
Confidence            9999 67787766666553    9999999999987643321  112222233   346999999 99999999999999


Q ss_pred             HHHHHHh--cCCCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492          302 IEYLWRA--KQPYNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  376 (423)
Q Consensus       302 ~~~l~~~--~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~  376 (423)
                      ++.+...  ...++.+++.+.++.++|+..   ++.+..++..+..++.+.+.+.+.+.+...++.|.|+|++++  .+.
T Consensus       269 ~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~--~~~  346 (396)
T PRK02627        269 ADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELD--RPA  346 (396)
T ss_pred             HhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEec--CcH
Confidence            8887643  345778999999999888642   333444444444444444444444444334567899999983  467


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++++.|.++||.+.+++    .+++||+++...+.+++.+++++|
T Consensus       347 ~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l  388 (396)
T PRK02627        347 AEIVKKALEKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRL  388 (396)
T ss_pred             HHHHHHHHHCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHH
Confidence            899999998999999865    478999875222235555555544

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=1.1e-27  Score=212.46  Aligned_cols=316  Identities=18%  Similarity=0.216  Sum_probs=221.4

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhc----C-------CCCCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQ----L-------KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL  158 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~----~-------~~~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a  158 (423)
                      .|.|+.|.+.-  -|++.+.+++    +       .....|..+ |...|.+++++++      ++++++|.+|+|++.+
T Consensus        32 ~imLggGNPa~--iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~  109 (417)
T COG3977          32 AIMLGGGNPAR--IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSA  109 (417)
T ss_pred             ceeeCCCCccc--ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccch
Confidence            57777654432  3555554433    1       112567544 7888888888875      4688999999999999


Q ss_pred             HHHHHHHhcCC---C--CeEEE-cCCCchhhHHHHHHCCCeEEEecC-----C---CCCCCCHHHHHHHhhcCCceEEEE
Q 014492          159 IDLIMRCVLDP---G--DKIVD-CPPTFTMYEFDAAVNGAAVVKVPR-----K---SDFSLNVELIADAVEREKPKCIFL  224 (423)
Q Consensus       159 l~~~~~~l~~~---g--d~Vl~-~~p~y~~~~~~~~~~g~~~~~v~~-----~---~~~~~d~~~l~~~i~~~~~~~i~l  224 (423)
                      ..-++..+.+.   |  .+|+. ..|.|.+|....-.-. -.+.+..     +   -.+.+|++++.-   .+++.+|++
T Consensus       110 fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i---~e~~g~ic~  185 (417)
T COG3977         110 FFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI---GESTGAICV  185 (417)
T ss_pred             HHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHccc---ccccceEEe
Confidence            99999877432   3  24544 5889988776432211 1222221     1   124678777754   268899999


Q ss_pred             cCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhh--ccCCcEEEEccChhhhcccCccccccccC
Q 014492          225 TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                      +.|.||||.+++.+|+.+|...    |+.+|+|.+|..-..+- .....  --.+|++.|.|+|| .|+||.|+|.++++
T Consensus       186 SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~i-ifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiIan  263 (417)
T COG3977         186 SRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGI-IFSDATPLWNENIILCMSLSK-LGLPGSRCGIIIAN  263 (417)
T ss_pred             cCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCce-ecccccccCCCCEEEEeehhh-cCCCCcceeEEEcc
Confidence            9999999999999999887664    99999999998422110 01111  12689999999999 79999999999999


Q ss_pred             HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHH---HHH-HHHHHHHHH----HHHHHHccCCCCeecCCCceEEEE
Q 014492          299 LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL---EKV-KEALIKERE----RLFKLLKDVPFLNPYPSYSNFILC  368 (423)
Q Consensus       299 ~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~---~~~-~~~~~~~~~----~l~~~L~~~~~~~~~p~~~~~~~~  368 (423)
                      +++++.+......  ..++...++.+..+++..+.+   +++ +-.|+++.+    .+++.|.+.++....|+++.|+|+
T Consensus       264 e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWL  343 (417)
T COG3977         264 EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWL  343 (417)
T ss_pred             HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehh
Confidence            9999999877654  345667888888889876542   222 223334444    444555556666678999999998


Q ss_pred             EeCC-CCCHHHHHHHHHhCCcEEEeCCC---------CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          369 EVTS-GMDAKKLKDDLAKMGVMIRHYNN---------KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       369 ~~~~-~~~~~~l~~~L~~~gI~v~~~~~---------~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.+ +++..+++++|++.||++.||..         +....|+|+++...+  ++++.++.+|
T Consensus       344 Wf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~--~~ie~Gva~l  405 (417)
T COG3977         344 WFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEP--EKIEKGVAIL  405 (417)
T ss_pred             hhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCCCH--HHHHHHHHHH
Confidence            8864 67899999999999999999876         233569999998654  4566666554

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.96  E-value=3.6e-27  Score=231.67  Aligned_cols=318  Identities=19%  Similarity=0.188  Sum_probs=229.5

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcCCCC--------CCCC---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQLKFP--------YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~~--------~~Y~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      .+++|+++--.-.-+.++.+++++.+....        +++.   .+...++|+.+|+++|.+  ++++++|+++++..+
T Consensus        17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~a   94 (387)
T PRK09331         17 EEEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD--EARVTHGAREGKFAV   94 (387)
T ss_pred             cccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHH
Confidence            356788876544445678888888763211        1111   224679999999999974  578899999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~  234 (423)
                      +.+++++||+|+++.++|......++..|++++.+|.  ++++.+|++++++.+.+      +++++|++++|+||||.+
T Consensus        95 l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~  174 (387)
T PRK09331         95 MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNL  174 (387)
T ss_pred             HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccc
Confidence            9999999999999999988776678889999999997  66788999999999863      278999999999999999


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~  313 (423)
                      .+.+++.++|+. |+++|+|++|+........    ...+..+++.|++|.++ .+.|+||+++++++++.+.+...++.
T Consensus       175 ~~l~~I~~la~~~g~~livD~a~~~g~~~~~~----~~~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~  249 (387)
T PRK09331        175 ADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDG----KKLGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFG  249 (387)
T ss_pred             ccHHHHHHHHHHcCCEEEEECCcccCCcCCCH----HHcCCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCc
Confidence            999999999997 9999999999843221111    12345688999999987 56689999999998888766433221


Q ss_pred             ----------CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCCceEEEEEeCC-------
Q 014492          314 ----------VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSYSNFILCEVTS-------  372 (423)
Q Consensus       314 ----------~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~~~~~~~~~-------  372 (423)
                                .+.....++.++++. .+.. +..++..++.+++.+.|++++++.+.   ++..+++.++.|.       
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~aal~~~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~  328 (387)
T PRK09331        250 VKEVELLGCTLRGAPLVTLMASFPHVVERV-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKK  328 (387)
T ss_pred             ccceeeeceecCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhh
Confidence                      211122222333322 1222 23445567788999999999666655   4456677677651       


Q ss_pred             -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014492          373 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL  422 (423)
Q Consensus       373 -~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l  422 (423)
                       +.+..++.+.|.++||...+.+   ....+|+.. + +.++++++.++|+.+
T Consensus       329 ~~~~~~~~~~~L~~~gI~~~~~~---~~~i~ri~~~g~t~~di~~l~~aL~~i  378 (387)
T PRK09331        329 HKRRGFFLYEELKKRGIHGIKPG---ATKEFKLSTYGLTWEQVEYVADAFKEI  378 (387)
T ss_pred             ccccchhHHHHHHHcCceEEccC---CceEEEEEeccCCHHHHHHHHHHHHHH
Confidence             1234568999999999844322   245677776 4 666777787777654

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.96  E-value=7e-28  Score=236.74  Aligned_cols=314  Identities=19%  Similarity=0.198  Sum_probs=225.4

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC-CC----C---CCCCCcchHHHHHHHHHHh---CC-CCCcEEEeCCHHHHHHHHHHHh
Q 014492           99 KIDANENPYGPPPEVREALGQL-KF----P---YIYPDPESRRLRAALAKDS---GL-ESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~~----~---~~Y~~~g~~~lr~~ia~~~---g~-~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      +|+.+.... +++.+++++.+. ..    .   +.|+..+...++++++++.   +. ++++|++|+|+++++..+++++
T Consensus         2 yld~aa~~~-~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~   80 (382)
T TIGR03403         2 YLDNNATTM-LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV   80 (382)
T ss_pred             cccCcCCCC-CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence            455554443 457788888652 11    1   2244444566777776665   44 6789999999999999999876


Q ss_pred             c-----CC-CCeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          167 L-----DP-GDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       167 ~-----~~-gd~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .     ++ +++|++....|+.+..   .++..|++++.+|.++++.+|++++++.+. ++++++++++|+||||.++|.
T Consensus        81 ~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~~  159 (382)
T TIGR03403        81 YFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-EKTALVSVMWANNETGMIFPI  159 (382)
T ss_pred             HHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-cCCeEEEEEcccCCCccccCH
Confidence            2     45 4689988877765443   345689999999987777899999999997 688999999999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH--HHH-----HHhc
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII--EYL-----WRAK  309 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~--~~l-----~~~~  309 (423)
                      +++.++++. |+++++|+++.....   ... +...+-.+++.|++|.+|.+|  +|+++.+++..  ..+     ....
T Consensus       160 ~~I~~la~~~g~~~ivD~a~~~g~~---~~~-~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~  233 (382)
T TIGR03403       160 KEIGEICKERGVLFHTDAVQAIGKI---PVD-VQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGR  233 (382)
T ss_pred             HHHHHHHHHcCCEEEEechhhcCCC---ccC-ccccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCc
Confidence            999999987 999999999873221   111 123334488899999887777  46665543220  000     0112


Q ss_pred             CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014492          310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      +.++++.+++.++..+++. .++++...++++++++++.+.|++++++.+.++.    .+++.+.++ +.+..++...|.
T Consensus       234 ~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~  312 (382)
T TIGR03403       234 RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK-GVEGEAMLWDLN  312 (382)
T ss_pred             ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC-CCCHHHHHHhhc
Confidence            3467888888777777764 3457778889999999999999988877765432    457777775 677888888888


Q ss_pred             hCCcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          385 KMGVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       385 ~~gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++||.++.|...              +     ..+.||+|+.   +.+|.|++.++|+.
T Consensus       313 ~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~  371 (382)
T TIGR03403       313 KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK  371 (382)
T ss_pred             cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence            999999965321              0     1367999986   56677777777654

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.96  E-value=2.4e-27  Score=231.90  Aligned_cols=311  Identities=13%  Similarity=0.102  Sum_probs=228.3

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          104 ENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      ..|.++.+.+.+++...- .++.+.  ....++|+.+++++|.++  +.|++++|+++++..++..+..+||.|++..++
T Consensus        11 pgP~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~   89 (368)
T PRK13479         11 PGPLTTSRTVREAMLRDW-GSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNG   89 (368)
T ss_pred             CCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCC
Confidence            355667888999887632 222221  146789999999999864  468899999999999999999999999988887


Q ss_pred             chhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492          180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       180 y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea  255 (423)
                      |...  ...++..|++++.+|.+.++.+|++++++.+.+ .+++++++++|+||||...|.+++.++|+. |+++|+|++
T Consensus        90 ~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~  169 (368)
T PRK13479         90 AYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAM  169 (368)
T ss_pred             chHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcc
Confidence            7654  467788999999999876678999999999863 357789999999999999999999999987 999999966


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhcCC-------------------CCCc
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNVS  315 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~~~-------------------~~~~  315 (423)
                      +. +...+  .. +...+..+++.|++|.+ |.+|  +||++++++.++.+.....+                   ++++
T Consensus       170 ~~-~g~~~--~~-~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~  243 (368)
T PRK13479        170 SS-FGAIP--ID-IAELGIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPP  243 (368)
T ss_pred             cc-cCCcc--cc-ccccCceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCc
Confidence            53 43211  11 22333457778999964 6677  69999999988776543211                   3556


Q ss_pred             HHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--Cc-eEEEEEeCC--CCCHHHHHHHHHhCC
Q 014492          316 VAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YS-NFILCEVTS--GMDAKKLKDDLAKMG  387 (423)
Q Consensus       316 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~-~~~~~~~~~--~~~~~~l~~~L~~~g  387 (423)
                      ...+.++.++++.   ..++++.+++++++++++.+.|+++++....++  .. ..+.+.++.  +.+..++.+.|.++|
T Consensus       244 ~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  323 (368)
T PRK13479        244 THVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQG  323 (368)
T ss_pred             HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCC
Confidence            5655555555543   334678889999999999999998864332221  11 223344443  357789999999999


Q ss_pred             cEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~l  422 (423)
                      |.++++... ..+++||+. +  +.++++.+.++|+++
T Consensus       324 i~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~  360 (368)
T PRK13479        324 FVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEA  360 (368)
T ss_pred             EEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            999887532 246899985 6  677777777777653

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.96  E-value=7.1e-28  Score=237.94  Aligned_cols=314  Identities=18%  Similarity=0.191  Sum_probs=226.9

Q ss_pred             CCCCCeeEcCCC--CCCCCC-CHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~  162 (423)
                      ..+++++||..+  .+.++. +|++.+++.+. ..    ...|+.+...++.+.++++++.+ ++++++++|+++++..+
T Consensus        40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~a  119 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAA  119 (398)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHH
Confidence            457789999876  456666 68888888762 21    13476665678999999998853 47999999999999999


Q ss_pred             HHHhcCCC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492          163 MRCVLDPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN  228 (423)
Q Consensus       163 ~~~l~~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (423)
                      ++....+| +.|+..+++|+.+...+.. .|.            ++..+|.     .|++++++.+. .++++|+++.++
T Consensus       120 l~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~-~~~~aviiep~~  193 (398)
T PRK03244        120 FKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVD-DDTAAVFLEPIQ  193 (398)
T ss_pred             HHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhc-CCeEEEEEeccc
Confidence            99766666 5677778899866544332 222            2222221     37899999885 689999999999


Q ss_pred             CCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          229 NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       229 NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      ||+|.+++    .+++.++|+. |+++|+||+|..|...+...  ...+..+++   .+|||.++ +|+|+||+++++++
T Consensus       194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~~~  269 (398)
T PRK03244        194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFGPA  269 (398)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCE---EEEchhhh-CCcccEEEEEcHHH
Confidence            99999998    5677778876 99999999998775433322  111222333   37899999 89999999999998


Q ss_pred             HHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--CeecCCCceEEEEEeCCCCCHH
Q 014492          302 IEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAK  377 (423)
Q Consensus       302 ~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~~~~~~~~~~~~~~  377 (423)
                      ++.+...  ...|+.+++++.++.++|+.-+ -++..++++++++++.+.|++++.  +....+.|+++|+.++. ..+.
T Consensus       270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~-~~~~  347 (398)
T PRK03244        270 ADLLTPGLHGSTFGGNPVACAAALAVLDTIA-SEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTA-PVAK  347 (398)
T ss_pred             HhhccCCCCcCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEec-cHHH
Confidence            8877642  3347889999999999876311 124556677778888888887542  22334678999999963 3567


Q ss_pred             HHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .+.+.|.++||.+++..    .++|||+++   +.++++++.+++++
T Consensus       348 ~~~~~l~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~  390 (398)
T PRK03244        348 AVEAAAREAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPA  390 (398)
T ss_pred             HHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHH
Confidence            88999999999998743    478999955   45555555555543

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.96  E-value=4.8e-27  Score=231.66  Aligned_cols=312  Identities=15%  Similarity=0.070  Sum_probs=231.2

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (423)
                      ..|...++.+++++......++.+..  -..++++.+++++|.+. +.+++++|+++++..++..++++||+|++.++.|
T Consensus        15 pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~   94 (401)
T PLN02409         15 PGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQ   94 (401)
T ss_pred             CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence            34556678999998763332332221  25678888888899865 4678899999999999998999999999999888


Q ss_pred             hhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHH--HcC-CCEEEE
Q 014492          181 TMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKI--LEM-PILVVL  252 (423)
Q Consensus       181 ~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i--~~~-~~~li~  252 (423)
                      ...  ...++..|++++.++.+.+..+|++++++.+++   +++++|++++++||||.++|.+++.++  ++. |+++|+
T Consensus        95 ~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vv  174 (401)
T PLN02409         95 FSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLV  174 (401)
T ss_pred             hhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEE
Confidence            644  466778899999999776667899999999974   379999999999999999999999999  886 999999


Q ss_pred             ccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--------------------CC
Q 014492          253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------------PY  312 (423)
Q Consensus       253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------------~~  312 (423)
                      |++++...    ....+...+..+++.|.+|.++.| .++||++.+++.++++.....                    ++
T Consensus       175 D~v~s~g~----~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  249 (401)
T PLN02409        175 DGVSSIGA----LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPY  249 (401)
T ss_pred             EcccccCC----ccccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCC
Confidence            99987321    111122344557888889988643 369999999998887653210                    23


Q ss_pred             CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC----CceEEEEEeCCCCCHHHHHHHHH-h
Q 014492          313 NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDDLA-K  385 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~~~~~~~~~~~~~~~l~~~L~-~  385 (423)
                      +++...+.++..+++.  ...+++++++++++++++.+.|++++.....+.    ....+++.+|++.+..++.+.|. +
T Consensus       250 Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~  329 (401)
T PLN02409        250 TPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKK  329 (401)
T ss_pred             CccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCHHHHHHHHHHh
Confidence            5666667777777764  335788889999999999999988753222221    12345688888889899988886 7


Q ss_pred             CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014492          386 MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       386 ~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      +||.+..|......+.+||+.....+.+++...+.
T Consensus       330 ~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~  364 (401)
T PLN02409        330 YNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALA  364 (401)
T ss_pred             CCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHH
Confidence            89999988754346899999653333344444333

>PLN02242 methionine gamma-lyase

Probab=99.96  E-value=1.9e-27  Score=234.17  Aligned_cols=245  Identities=15%  Similarity=0.146  Sum_probs=190.2

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH-----HHCCCeEEEecCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPRK  200 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~g~~~~~v~~~  200 (423)
                      ++++...+|++.+++++|.  +.+++++|+++++..++.+++++||.|+++.|.|..+...+     +..|++++.++. 
T Consensus        73 ~~~Pt~~~LE~~lA~l~g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~-  149 (418)
T PLN02242         73 HFNPTVLNLGRQMAALEGT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI-  149 (418)
T ss_pred             CCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC-
Confidence            4678889999999999996  45678999999999999999999999999999998776543     347888887763 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          .|++++++++++.++|+|++++|+||||.+.+.+++.++++. |++||+|++|..+...+.      ..+.++++.
T Consensus       150 ----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~------~~g~divv~  219 (418)
T PLN02242        150 ----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPA------RLGADVVVH  219 (418)
T ss_pred             ----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHH------HcCCcEEEE
Confidence                389999999973369999999999999999999999999987 999999999987654321      224569999


Q ss_pred             cChhhhcccCcc-ccccccCHHHHHHHHHhcC----CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          280 TFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       280 S~SK~~g~~G~R-~G~i~~~~~~~~~l~~~~~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      |+||.++.+|.+ .||+++++++++.+.+...    ..+.+...|.|+..++.. .++..+.++++++++++.+.|++++
T Consensus       220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l-~tl~~r~~~~~~~a~~la~~L~~~~  298 (418)
T PLN02242        220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL-PHLSLRMKEHCRRAMEYAKRMKELG  298 (418)
T ss_pred             eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999888988 5999999999998886643    234444456666655543 3566677889999999999999886


Q ss_pred             CCeecCC-------------------CceEEEEEeCCCCCHHHHHHHHH
Q 014492          355 FLNPYPS-------------------YSNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       355 ~~~~~p~-------------------~~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      ....+|+                   .|..+.+++.+...+..|++.|.
T Consensus       299 ~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~  347 (418)
T PLN02242        299 LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQ  347 (418)
T ss_pred             CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhh
Confidence            4223342                   24556777752223456666664

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=1.4e-26  Score=225.58  Aligned_cols=320  Identities=21%  Similarity=0.244  Sum_probs=249.3

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC----C-CCC--CCCCc-----chHHHHHHHHHHhCCCC-CcEEEeCCHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL----K-FPY--IYPDP-----ESRRLRAALAKDSGLES-DHILVGCGADELID  160 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~----~-~~~--~Y~~~-----g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~  160 (423)
                      +.++++|++..... .|..+.+++.+.    . ..+  .|+..     .+++.|+++++++|.++ ++|++|.|+|++++
T Consensus        20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln   98 (405)
T COG0520          20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN   98 (405)
T ss_pred             CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence            45679999877666 677888888752    1 112  12211     25689999999999985 89999999999999


Q ss_pred             HHHHHh---cCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          161 LIMRCV---LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       161 ~~~~~l---~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      ++..++   ..+||+|++..-.|+    ++...++..|++++.+|.++++.+|.++++..++ ++||+|.+++.+|.||.
T Consensus        99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG~  177 (405)
T COG0520          99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSHVSNVTGT  177 (405)
T ss_pred             HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-CCceEEEEECccccccc
Confidence            999998   689999999999886    5666677789999999988888999999999887 79999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChh-hhcccCccccccccCHHHHHHHHHhcC-
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK-RAGLAGLRVGYGAFPLSIIEYLWRAKQ-  310 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK-~~g~~G~R~G~i~~~~~~~~~l~~~~~-  310 (423)
                      +.|.++|.++++. |+++++|.+++-..    ....+...+.+++..|.+| .+|..|  +|++++++++++.+..... 
T Consensus       178 ~~pv~~I~~la~~~ga~v~VDaaq~~~h----~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l~P~~~g  251 (405)
T COG0520         178 VNPVKEIAELAHEHGALVLVDAAQAAGH----LPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEELEPFLGG  251 (405)
T ss_pred             cchHHHHHHHHHHcCCEEEEECccccCc----cCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHHHhhcCCcccC
Confidence            9999999999998 99999999988322    2222345566799999999 566446  7999999999988732110 


Q ss_pred             -----------------------CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC---
Q 014492          311 -----------------------PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS---  361 (423)
Q Consensus       311 -----------------------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~---  361 (423)
                                             ..+++.....++.++++-  ...++++.++.+++.+++.+.|++++.+.++ |.   
T Consensus       252 g~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~  331 (405)
T COG0520         252 GGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDAD  331 (405)
T ss_pred             CCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCccc
Confidence                                   013344444444455543  1236788899999999999999999987753 32   


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--------~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+..+.+.++ +.++.++...|.++||.++.+...        ..++.+|+|+.   +.+|.|+|.++|+++
T Consensus       332 r~~~vsF~v~-~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~  402 (405)
T COG0520         332 RGGIVSFNVK-GIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKA  402 (405)
T ss_pred             CceEEEEEeC-CCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            4667777886 778999999999999999987542        22456999975   788899999998875

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.96  E-value=5.5e-27  Score=232.05  Aligned_cols=316  Identities=17%  Similarity=0.159  Sum_probs=222.8

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCC---CC------CCC-CCcchHHHHH----HHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQLK---FP------YIY-PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~---~~------~~Y-~~~g~~~lr~----~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      .+.|..+++..  +|.+++++....   +.      ..| +..+.+.+++    .+++++|.+..+|++++| ++++..+
T Consensus        21 ~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sg-t~a~~~~   97 (402)
T cd00378          21 TLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSG-SQANLAV   97 (402)
T ss_pred             CeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCc-HHHHHHH
Confidence            58887777766  689999997621   11      123 2233445554    466788987666766655 6899999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHH-----HHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      +.+++++||+|++++|+|..+...     ++..|.++..++.+.   ++.+|++++++.+.+.+++++++++|+||  ..
T Consensus        98 l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~  175 (402)
T cd00378          98 YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RP  175 (402)
T ss_pred             HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CC
Confidence            999999999999999999765432     556788777776432   68999999999996568999999998875  56


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCC-ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC
Q 014492          235 INDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP  311 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~  311 (423)
                      .+.+++.++|+. |+++|+|++| .++.+.+.....+.  ...++++|+||.+  +|.|.||+++++ ++++++.+...+
T Consensus       176 ~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~  251 (402)
T cd00378         176 IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFP  251 (402)
T ss_pred             cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCc
Confidence            789999999987 9999999996 43332221111122  2237899999975  789999999977 888888776554


Q ss_pred             CC--Cc-HHHHHHHHHHhCC-h-HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH
Q 014492          312 YN--VS-VAAEVAACAALQN-P-IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA  384 (423)
Q Consensus       312 ~~--~~-~~~~~a~~~~l~~-~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~  384 (423)
                      +.  .+ ...+.++..++.. . .+.++.+++++++++++.+.|++.++... .|.+++|+|+++++ +.+...+.+.|.
T Consensus       252 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~  331 (402)
T cd00378         252 GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALE  331 (402)
T ss_pred             cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCCCHHHHHHHHH
Confidence            32  22 2233333333332 2 25677888899999999999998864322 45689999999973 456677788788


Q ss_pred             hCCcEEEeCCCC------CCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492          385 KMGVMIRHYNNK------ELKGYVRVSVGK-------PEHTDALMECLMH  421 (423)
Q Consensus       385 ~~gI~v~~~~~~------~~~~~iRis~~~-------~~~~~~l~~al~~  421 (423)
                      ++||.+.+...+      ...+++||++..       .++++.+.+.|++
T Consensus       332 ~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~  381 (402)
T cd00378         332 EAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR  381 (402)
T ss_pred             HcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence            999999853221      135689999854       5566666666655

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.96  E-value=4.4e-27  Score=230.72  Aligned_cols=317  Identities=20%  Similarity=0.205  Sum_probs=227.9

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-C-C--C---CCCCC-----cchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQL-K-F--P---YIYPD-----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMR  164 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~-~--~---~~Y~~-----~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~  164 (423)
                      ++|+.+.+++++|+.+.+++.+. . .  .   ..|+.     ....++|+.+++++|.+. ++|++|+|+++++.+++.
T Consensus         1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~   80 (376)
T TIGR01977         1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK   80 (376)
T ss_pred             CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence            36788888888888888887652 1 1  1   12432     345689999999999854 589999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      +++++||+|++..++|..+.    ..++..|++++.++.+.++.+|++++++.++ ++++++++++|+||||.+++.+++
T Consensus        81 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~~~~i  159 (376)
T TIGR01977        81 GLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILPIEEI  159 (376)
T ss_pred             hccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCCHHHH
Confidence            99999999999999997643    3455679999999977777899999999996 689999999999999999999999


Q ss_pred             HHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHHHh----------
Q 014492          241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWRA----------  308 (423)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~~~----------  308 (423)
                      .++|+. |+++|+|++++.....-    .+...+..+++.|++|.++.|. .+|.++..++. ++.+...          
T Consensus       160 ~~l~~~~~~~livD~a~~~g~~~~----~~~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~  234 (376)
T TIGR01977       160 GELAQENGIFFILDAAQTAGVIPI----DMTELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALID  234 (376)
T ss_pred             HHHHHHcCCEEEEEhhhccCccCC----CchhcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCcccccccc
Confidence            999987 99999999997543211    1123345588899999765332 25666554432 1111100          


Q ss_pred             --------cCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----CceEEEEEeCCC
Q 014492          309 --------KQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPS-----YSNFILCEVTSG  373 (423)
Q Consensus       309 --------~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~~~~~~~~~~~  373 (423)
                              ....+.+.....++..+++.-  ...+.++++.+++.+++.+.|.+++++.+...     .+..+++.++ +
T Consensus       235 ~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~-~  313 (376)
T TIGR01977       235 QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE-G  313 (376)
T ss_pred             ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC-C
Confidence                    011234555555555555431  22456778888999999999988776654321     2567778886 5


Q ss_pred             CCHHHHHHHHHhC-CcEEEeCCCC----------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          374 MDAKKLKDDLAKM-GVMIRHYNNK----------ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       374 ~~~~~l~~~L~~~-gI~v~~~~~~----------~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .+.+++.+.|.++ ||.++.+...          ...+.|||++.   +.++.+.+.++|+.
T Consensus       314 ~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       314 IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            6888999999866 9999876531          13579999986   45555666665554

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.96  E-value=1.8e-27  Score=236.30  Aligned_cols=324  Identities=19%  Similarity=0.172  Sum_probs=225.3

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCCCCCCCc-----chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y~~~-----g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..++++|||..|  ...++ .+|.+.+++.+ +.....|+..     ...++++.++++++.+.+++++++|+++++..+
T Consensus        33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~a  112 (413)
T cd00610          33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAA  112 (413)
T ss_pred             CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence            356789999876  55677 78899888876 3333344432     356899999999998788999999999999999


Q ss_pred             HHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCC------CCCCCHHHHHHHhhc--CCc
Q 014492          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS------DFSLNVELIADAVER--EKP  219 (423)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~------~~~~d~~~l~~~i~~--~~~  219 (423)
                      ++.+.  .+++.|++.+++|+........ .+            .+++.+|.++      ++..|++.+++.+.+  .++
T Consensus       113 l~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~  192 (413)
T cd00610         113 LKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEV  192 (413)
T ss_pred             HHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCE
Confidence            99763  5689999999999865443332 21            2356666442      234489999999874  356


Q ss_pred             eEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccc
Q 014492          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      ++++++..+|++|.+++    .+++.++|+. |+++|+||+|..+...+.... ....+...-+.|+||.++ .|+|+||
T Consensus       193 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~-~~~~~~~~d~~t~sK~l~-~g~~~g~  270 (413)
T cd00610         193 AAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFA-FEHFGVEPDIVTLGKGLG-GGLPLGA  270 (413)
T ss_pred             EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhh-HhhcCCCCCeEEEccccc-CccccEE
Confidence            77777777788899886    5666666665 999999999997743222111 111111112458899998 5899999


Q ss_pred             cccCHHHHHHH--HHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEE
Q 014492          295 GAFPLSIIEYL--WRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFI  366 (423)
Q Consensus       295 i~~~~~~~~~l--~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~  366 (423)
                      +++++++++.+  ....  ..++.+++++.++.++|+..+. ++..++++++.+++.+.|+++    +......+.|.++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~  349 (413)
T cd00610         271 VLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMI  349 (413)
T ss_pred             EEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEE
Confidence            99999999886  2222  2357788888888877753211 345667777777777777654    2222234567888


Q ss_pred             EEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          367 LCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       367 ~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.+++.        .....+.+.|.++||.+.+++    .+++|++++...+.+++.++++++
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l  409 (413)
T cd00610         350 GIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDAL  409 (413)
T ss_pred             EEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHH
Confidence            8888643        356778899999999999975    578999887543335555555543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.96  E-value=2.3e-26  Score=225.32  Aligned_cols=282  Identities=19%  Similarity=0.193  Sum_probs=215.0

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc------CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCC
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS  204 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  204 (423)
                      ..++++.+++++|++++++++++|+++++..++.++.      ++||+|+++.++|..+...++..|++++.++.+.++.
T Consensus        61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~  140 (373)
T TIGR03812        61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYT  140 (373)
T ss_pred             HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCC
Confidence            3689999999999988889999999999988877654      4678999999999999999999999999999877788


Q ss_pred             CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-----Cc--hhhhhccCCcEE
Q 014492          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKHDNLI  276 (423)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-----~~--~~~~~~~~~~~i  276 (423)
                      +|++++++.+. +++..+++.+|+||||.+.+.+++.++++. |+++|+|++|..+...     ..  ... .....-..
T Consensus       141 ~d~~~l~~~l~-~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~  218 (373)
T TIGR03812       141 VDVKDVEDLID-DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQS  218 (373)
T ss_pred             cCHHHHHHHHh-hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCE
Confidence            99999999996 455545545589999999999999999987 9999999999855310     00  000 00111224


Q ss_pred             EEccChhhhcccCccccccc-cCHHHHHHHHHhcCCC-----------CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPY-----------NVSVAAEVAACAALQN--PIYLEKVKEALIKE  342 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~-~~~~~~~~l~~~~~~~-----------~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~  342 (423)
                      +..|.+| |++++.|.|+++ .++++++.+.. ..+|           +.+.....++..+++.  .+.+++..+++.++
T Consensus       219 ~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~  296 (373)
T TIGR03812       219 ITIDPHK-MGLSPIPAGGILFRSKSYLKYLSV-DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMEN  296 (373)
T ss_pred             EEECccc-cCCCcCCceEEEEeCHHHHhhhcc-cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            4567789 777888888655 57788776642 2222           2334556666666654  45567888999999


Q ss_pred             HHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492          343 RERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  419 (423)
Q Consensus       343 ~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  419 (423)
                      ++++.+.|+++++..+.++..+++.++++   +..++.+.|.++||.++.+.   .++++||+++   +.++++++.++|
T Consensus       297 ~~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L  370 (373)
T TIGR03812       297 TRYLVEELKKIGFEPVIEPVLNIVAFEVD---DPEEVRKKLRDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDL  370 (373)
T ss_pred             HHHHHHHHHhCCCeEEcCCCceEEEEEeC---CHHHHHHHHHHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHH
Confidence            99999999998765555667788888886   35689999999999998753   3579999986   677788888887


Q ss_pred             hhh
Q 014492          420 MHL  422 (423)
Q Consensus       420 ~~l  422 (423)
                      ++|
T Consensus       371 ~~~  373 (373)
T TIGR03812       371 KEI  373 (373)
T ss_pred             hhC
Confidence            754

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=1.9e-26  Score=212.65  Aligned_cols=332  Identities=19%  Similarity=0.270  Sum_probs=246.2

Q ss_pred             CCCchHHHHHHhCCCC-CCeeEcCCC--CCCCCC---CHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh-C----
Q 014492           79 PILPFEVLSIQLGRKP-EDIVKIDAN--ENPYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G----  143 (423)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~i~l~~~--~~~~~~---~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~-g----  143 (423)
                      |.+++..+...+...+ .+.|+|+.|  .+..+.   -+.|.+|-..+   .....| |..|.+++++.+++.+ |    
T Consensus         9 p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~   88 (396)
T COG1448           9 PADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSP   88 (396)
T ss_pred             CCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcH
Confidence            5667777888776654 456899887  233333   34555554442   334667 7789999999999974 6    


Q ss_pred             -CCCCcE--EEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc
Q 014492          144 -LESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER  216 (423)
Q Consensus       144 -~~~~~i--~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~  216 (423)
                       ++.++|  +-|.|++.|+.+...-+  ..+..+|.+++|+|+.+.......|.++..+|.  .++..+|++.+...+.+
T Consensus        89 ~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~  168 (396)
T COG1448          89 ALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKT  168 (396)
T ss_pred             HHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHh
Confidence             333443  46889999999888755  345677999999999999999999999999993  34567999999999875


Q ss_pred             CCce-EEEEc-CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhhhhccCCcEEEEccChhhh
Q 014492          217 EKPK-CIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RMEWVKKHDNLIVLRTFSKRA  285 (423)
Q Consensus       217 ~~~~-~i~l~-~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~~~~~~~~~i~i~S~SK~~  285 (423)
                      ...+ +|+|. -.|||||.-++.+++.+|++.    +.+.+.|-+|.+|..+-.     ....+......+++.||||.|
T Consensus       169 a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnf  248 (396)
T COG1448         169 APEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNF  248 (396)
T ss_pred             CCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhh
Confidence            4444 44444 458999999999999999985    999999999999985421     122233345589999999999


Q ss_pred             cccCcccccccc---CHHHHHHHH----Hh-cCCC-CCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHH
Q 014492          286 GLAGLRVGYGAF---PLSIIEYLW----RA-KQPY-NVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKL  349 (423)
Q Consensus       286 g~~G~R~G~i~~---~~~~~~~l~----~~-~~~~-~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~  349 (423)
                      |+.|.|+|.+..   +.+..+++.    .. +..| +++..+...+...|+++    +|   +..++.++.++|..|.+.
T Consensus       249 gLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~  328 (396)
T COG1448         249 GLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDA  328 (396)
T ss_pred             hhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999997654   444444433    22 2334 56777888888999985    34   567899999999999999


Q ss_pred             HccC----CCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492          350 LKDV----PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  422 (423)
Q Consensus       350 L~~~----~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  422 (423)
                      |++.    .+..+..+.|+|.+.    |.+.+++.+...++||++...+        ||+++  +..+++.+.+++...
T Consensus       329 L~~~~~~~~f~~i~~Q~GMFsy~----Gls~~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v  395 (396)
T COG1448         329 LKALGAPRNFDFIISQRGMFSYT----GLSPEQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             HHhhCCCcccchHhhcCceeecC----CCCHHHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence            9883    344456788999887    5566776665559999999877        99997  466678888887653

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.96  E-value=1.7e-26  Score=225.44  Aligned_cols=308  Identities=12%  Similarity=0.033  Sum_probs=226.2

Q ss_pred             CCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      |...++.+.+++...- .++-+..  -.+++|+.+++++|.+++  .|++|+|++++++.++..+..+||.+++..+.+.
T Consensus        11 p~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~   89 (363)
T TIGR02326        11 PLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAY   89 (363)
T ss_pred             CCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChh
Confidence            4445678888876522 1211111  256889999999999754  7999999999999999999888888777655554


Q ss_pred             hh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc
Q 014492          182 MY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (423)
Q Consensus       182 ~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~  257 (423)
                      ..  ...++..|++++.++.++++.+|++++++.+.+ .+++++.+++++||||+.+|.++|.++|+. |+++|+|++++
T Consensus        90 ~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~  169 (363)
T TIGR02326        90 GARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSS  169 (363)
T ss_pred             hHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcccc
Confidence            33  466788999999999877778999999999864 356788889999999999999999999987 99999999876


Q ss_pred             cccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHh--------------------cCCCCCcH
Q 014492          258 EFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA--------------------KQPYNVSV  316 (423)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~--------------------~~~~~~~~  316 (423)
                      ... .+  . .+...+..+++.|++|.+ |.+|  +||++++++.++++...                    ...|+.+.
T Consensus       170 ~g~-~~--~-~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~  243 (363)
T TIGR02326       170 FGG-IP--I-DIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPT  243 (363)
T ss_pred             ccC-cc--c-chhhcCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcH
Confidence            322 11  1 122334558889999976 4445  79999999887764321                    02356777


Q ss_pred             HHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC---CCceEEEEEeCCC--CCHHHHHHHHHhCCc
Q 014492          317 AAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSG--MDAKKLKDDLAKMGV  388 (423)
Q Consensus       317 ~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~~~~~~~~~~--~~~~~l~~~L~~~gI  388 (423)
                      ..+.++.++++.   ...+++..++++++++++.+.|+++++....+   ..+..+++.+++.  .+..++.+.|.++||
T Consensus       244 ~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi  323 (363)
T TIGR02326       244 HVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGF  323 (363)
T ss_pred             HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCE
Confidence            777776666654   22367788999999999999998886433222   2334567888753  577889999999999


Q ss_pred             EEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhh
Q 014492          389 MIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMH  421 (423)
Q Consensus       389 ~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~  421 (423)
                      .++++..+ ..+++||++ +  +.++++++.++|++
T Consensus       324 ~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~  358 (363)
T TIGR02326       324 VIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGK  358 (363)
T ss_pred             EEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            99987643 357999996 4  55566666666654

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.96  E-value=2.5e-26  Score=225.45  Aligned_cols=319  Identities=15%  Similarity=0.142  Sum_probs=225.5

Q ss_pred             CCCCeeEcCCCCC--CCCCC---HHH----HHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           93 KPEDIVKIDANEN--PYGPP---PEV----REALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        93 ~~~~~i~l~~~~~--~~~~~---~~v----~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      .+.+.+.|.+++.  ++.++   ..+    .+++..  ....| ++.+..+||+++++++|.  +++++|+|+++++.++
T Consensus         9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~--gd~~Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la   84 (431)
T cd00617           9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMML--GDEAYAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENIL   84 (431)
T ss_pred             cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHh--CCCccCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHH
Confidence            4455677777766  55443   233    333332  11347 677899999999999996  5799999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhcC---CceEEEEcCCCC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN  229 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~---~~~~i~l~~p~N  229 (423)
                      +.++++|||.| +++|.|..+.......|++++.++.+.          .+.+|+++|++.+.+.   ++++|++++|+|
T Consensus        85 ~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N  163 (431)
T cd00617          85 FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNN  163 (431)
T ss_pred             HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcC
Confidence            99999999977 689999999988899999999999642          2349999999999732   388999999999


Q ss_pred             Cc-CcCCCHHHHHHHHc---C-CCEEEEccCCccc--cC--------CCchhhhhccCCcEEEEccChhhhcccCcc---
Q 014492          230 PD-GSIINDEDLLKILE---M-PILVVLDEAYTEF--SG--------LESRMEWVKKHDNLIVLRTFSKRAGLAGLR---  291 (423)
Q Consensus       230 Pt-G~~~~~~~l~~i~~---~-~~~li~Deay~~~--~~--------~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R---  291 (423)
                      |+ |.+++.+++++|++   . |++||+|+++...  .+        ....+.     +..+.+.|++|.+.+.|+|   
T Consensus       164 ~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~-----ei~~e~~s~sd~~~mS~~K~~~  238 (431)
T cd00617         164 TAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA-----EIAREMFSYADGCTMSAKKDGL  238 (431)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH-----HHHHHhhccCCEEEEEeecCCC
Confidence            98 99999987765554   4 9999999996421  11        111111     2234567888888888887   


Q ss_pred             ---ccccccCH-HHHHHHHHhcCC-------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492          292 ---VGYGAFPL-SIIEYLWRAKQP-------YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP  360 (423)
Q Consensus       292 ---~G~i~~~~-~~~~~l~~~~~~-------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p  360 (423)
                         .||+++++ +++++++.....       .+.+.....++..+|+.....+...+++ ++++++.+.|++.++-.+.|
T Consensus       239 ~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~-~~r~~l~~~L~~~G~~v~~P  317 (431)
T cd00617         239 VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRV-EQVRYLGDRLDEAGVPIVEP  317 (431)
T ss_pred             CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHH-HHHHHHHHHHHHCCCCccCC
Confidence               56999976 588887753311       1234444444444664321122233333 35688999999988666678


Q ss_pred             CCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEe-CC------CCC------CCCeEEEEec----ChhhHHH
Q 014492          361 SYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRH-YN------NKE------LKGYVRVSVG----KPEHTDA  414 (423)
Q Consensus       361 ~~~~~~~~~~~~--------~~~~~~l~~~L~-~~gI~v~~-~~------~~~------~~~~iRis~~----~~~~~~~  414 (423)
                      .+++|+|++.+.        ..++.+++..|. +.||.+.. |.      ...      .-..+|+++.    +.++++.
T Consensus       318 ~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~  397 (431)
T cd00617         318 AGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDY  397 (431)
T ss_pred             CcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHH
Confidence            999999999762        235888887776 88998753 22      111      2368999975    5677888


Q ss_pred             HHHHHhhh
Q 014492          415 LMECLMHL  422 (423)
Q Consensus       415 l~~al~~l  422 (423)
                      +.+++..+
T Consensus       398 ~~~~~~~~  405 (431)
T cd00617         398 VAAAVIAL  405 (431)
T ss_pred             HHHHHHHH
Confidence            88888765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.96  E-value=4.6e-26  Score=225.46  Aligned_cols=317  Identities=16%  Similarity=0.122  Sum_probs=225.8

Q ss_pred             CCeeEcCCC-CCCCCCCHHHHHHHhcC-C-CCCC-------CC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDAN-ENPYGPPPEVREALGQL-K-FPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~~-~-~~~~-------Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      +++++|..| +-.+..+|++++++.+. . ++..       +. .+...+|++.+++++|. +..+++++|+ +++..++
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-~~~~~~~SG~-~An~~ai  122 (406)
T PRK13393         45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK-EAALLFTSGY-VSNWAAL  122 (406)
T ss_pred             ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC-CcEEEeCCcH-HHHHHHH
Confidence            467888765 45567789999888762 1 2111       11 11357899999999995 3456666665 5888888


Q ss_pred             HHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHH
Q 014492          164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ..+..  +||.|+.....|......++..|++++.++.     .|++.+++.+..   .++++|++++++|++|.+.+.+
T Consensus       123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~  197 (406)
T PRK13393        123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIA  197 (406)
T ss_pred             HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHH
Confidence            87665  6787777777887777777888888877762     366777766642   3678999999999999999999


Q ss_pred             HHHHHHcC-CCEEEEccCCccccCCCch---hhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--
Q 014492          239 DLLKILEM-PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--  311 (423)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--  311 (423)
                      ++.++|+. ++++|+||+|....+++..   ....+. .+.+++++||||.||++|   ||+++++++++.+......  
T Consensus       198 ~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~  274 (406)
T PRK13393        198 EICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFI  274 (406)
T ss_pred             HHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCce
Confidence            99999997 9999999999743322211   111111 223678899999999888   9999999999988876554  


Q ss_pred             --CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-CCc
Q 014492          312 --YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGV  388 (423)
Q Consensus       312 --~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~-~gI  388 (423)
                        .+.++..+.++.++|+..+.....+++++++++++.+.|+++++ .+.++.++++.+.+++..++.++.+.|.+ +||
T Consensus       275 ~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi  353 (406)
T PRK13393        275 FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAGI-PHLPNPSHIVPVMVGDPVLCKQISDELLDRYGI  353 (406)
T ss_pred             ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCE
Confidence              24566777777777764221123346678889999999988753 44466777877766432346788888886 699


Q ss_pred             EEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          389 MIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .++++..+   .+.++|||++.   +.++++++.++|+++
T Consensus       354 ~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~  393 (406)
T PRK13393        354 YVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEI  393 (406)
T ss_pred             EEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            99876542   34578999986   677777777777653

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.96  E-value=1.7e-26  Score=226.73  Aligned_cols=314  Identities=19%  Similarity=0.141  Sum_probs=219.7

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc----------chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc
Q 014492           99 KIDANENPYGPPPEVREALGQL-KFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~----------g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~  167 (423)
                      +|+.+... +.++.+.+++.+. .....+|..          ..+++|+.+++++|+++++|++|+|++++++.++..++
T Consensus         2 yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~   80 (379)
T TIGR03402         2 YLDNNATT-RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSAL   80 (379)
T ss_pred             cCCCcCCC-CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH
Confidence            44544332 3467888888752 111122210          14578899999999999999999999999999988764


Q ss_pred             ---CCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          168 ---DPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       168 ---~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                         .+||.|++....|+.+...   ++..|++++.+|.+.++.+|++++++.++ ++++++++++++||||.++|.+++.
T Consensus        81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~~~I~  159 (379)
T TIGR03402        81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-DDTALVSVMWANNETGTIFPIEEIG  159 (379)
T ss_pred             HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEEcccCCeeecccHHHHH
Confidence               4568899988888765433   33469999999987777899999999997 6899999999999999999999999


Q ss_pred             HHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH-HH-H-----HHhcCCCC
Q 014492          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII-EY-L-----WRAKQPYN  313 (423)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~-~~-l-----~~~~~~~~  313 (423)
                      ++|+. |+++++|++|.....   .. .+...+-.+++.|.+|.+|.+|  +|+++.+++.. .. +     ......++
T Consensus       160 ~l~~~~g~~vivD~~~~~g~~---~~-~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt  233 (379)
T TIGR03402       160 EIAKERGALFHTDAVQAVGKI---PI-DLKEMNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGT  233 (379)
T ss_pred             HHHHHcCCEEEEECccccccc---cc-CcccCCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCC
Confidence            99987 999999999974221   11 1222344578888899776556  67777655431 00 0     00112345


Q ss_pred             CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeecCC---C-ceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYPS---Y-SNFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~---~-~~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      .+.....++.++++. .+++++..++++++++++.+.|++ ++.+.+...   . ...+.+.++ +.+..++...|.++|
T Consensus       234 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g  312 (379)
T TIGR03402       234 ENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE-YIEGEAILLLLDMEG  312 (379)
T ss_pred             ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec-CCCHHHHHHhhccCC
Confidence            666666666666654 356777888999999999999985 766654321   1 223333444 457889999998999


Q ss_pred             cEEEeCCCC--C-----------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          388 VMIRHYNNK--E-----------------LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       388 I~v~~~~~~--~-----------------~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      |.++.+...  .                 ..+.||+|++   +.+|++++.++|+.
T Consensus       313 I~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~  368 (379)
T TIGR03402       313 ICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP  368 (379)
T ss_pred             EEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence            999976531  1                 1478999986   45566666666654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.95  E-value=4.8e-26  Score=225.04  Aligned_cols=318  Identities=16%  Similarity=0.182  Sum_probs=221.3

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCC------CcchHH----HHHHHHHHhCCCCCcEEEeC-CHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIYP------DPESRR----LRAALAKDSGLESDHILVGC-GADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~------~~g~~~----lr~~ia~~~g~~~~~i~~t~-G~~~al~~~~  163 (423)
                      ..++.++.+.+++++|+.+.++..+......|.      ..|..+    +++.+++++|.+.+++++++ |++++...+.
T Consensus        20 ~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~   99 (398)
T cd00613          20 QSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGL   99 (398)
T ss_pred             cCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHH
Confidence            345899999999988888777666551112342      234444    55555566788766777766 4445555555


Q ss_pred             HHhcCC--CCeEEEcCCCchhhHHHHHHCC----CeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          164 RCVLDP--GDKIVDCPPTFTMYEFDAAVNG----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       164 ~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .+++.+  ||+|+++.|.|+.+...++..|    ++++.++.++++.+|++++++.+. +++++|++++|+ |||.+.+.
T Consensus       100 ~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~t~~viv~~~~-~~G~~~~~  177 (398)
T cd00613         100 AAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-EEVAALMVQYPN-TLGVFEDL  177 (398)
T ss_pred             HHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-CCeEEEEEECCC-CCceecch
Confidence            556666  9999999999998888887777    999999976667899999999996 689999999985 89999886


Q ss_pred             -HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHHHh---
Q 014492          238 -EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA---  308 (423)
Q Consensus       238 -~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~---  308 (423)
                       +++.++|+. |+++|+|++|..+.. ...   ....+.++++.|++|.+ ++    |+|+||++.++++++.+...   
T Consensus       178 l~~i~~la~~~g~~livD~~~~~~~~-~~~---~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~  252 (398)
T cd00613         178 IKEIADIAHSAGALVYVDGDNLNLTG-LKP---PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVG  252 (398)
T ss_pred             HHHHHHHHHhcCCEEEEEeccccccC-CCC---hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeec
Confidence             999999987 999999998764331 111   11234569999999987 55    78999999998887764110   


Q ss_pred             --------------------------cC--CCCCcHHH-HHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCee
Q 014492          309 --------------------------KQ--PYNVSVAA-EVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNP  358 (423)
Q Consensus       309 --------------------------~~--~~~~~~~~-~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  358 (423)
                                                ..  .++.+... +.+...+.. ..+.+++.+++++++++++.+.|+++++.. 
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-  331 (398)
T cd00613         253 VTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVL-  331 (398)
T ss_pred             cccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-
Confidence                                      00  01222222 233222222 245678889999999999999999887554 


Q ss_pred             cCCCceE--EEEEeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          359 YPSYSNF--ILCEVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       359 ~p~~~~~--~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      .+.+..+  ++++++.  +.++.++++.|.++||.+.... ....+.+|+++....+.+++++.++.
T Consensus       332 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~  397 (398)
T cd00613         332 PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEA  397 (398)
T ss_pred             cCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence            2333333  5777764  3467889999999999875422 23457999998754444566666554

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.95  E-value=8.8e-26  Score=216.05  Aligned_cols=317  Identities=21%  Similarity=0.188  Sum_probs=244.7

Q ss_pred             CCCeeEcCCCC-CCCCCCHHHHHHHhcC--CCC-----CC--CCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDANE-NPYGPPPEVREALGQL--KFP-----YI--YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~-----~~--Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +.++++|.+|+ -.+..+|+++++..+.  .++     .+  +++. -..+|++.+|+|+|. ++.+++++|-. ++..+
T Consensus        38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~-e~al~f~SGy~-AN~~~  115 (388)
T COG0156          38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA-EAALLFSSGFV-ANLGL  115 (388)
T ss_pred             CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEEcccch-hHHHH
Confidence            46689998763 4567788888777652  111     11  2222 256899999999995 46788888887 55566


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCH
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~  237 (423)
                      +.+|++++|.|+...-.|.+....++..+++++.+.     ..|++.|++.+.+.     +.++|+......+.|.+.|+
T Consensus       116 i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL  190 (388)
T COG0156         116 LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFK-----HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL  190 (388)
T ss_pred             HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEec-----CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence            677999999999999999999999999999999987     36889999998642     25677777999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCchhhhh-----ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWV-----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~-----~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      +++.+|++. +.++++||+|+-...++.....+     ...+.+|+++||||+||..|   ||+.++..+++.+....++
T Consensus       191 ~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~  267 (388)
T COG0156         191 PELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARP  267 (388)
T ss_pred             HHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCc
Confidence            999999998 99999999999877654332222     22455899999999999888   9999999999999988776


Q ss_pred             C----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          312 Y----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       312 ~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      |    ++++....++..+++..+.....+++++++..++.+.++..++ ...++.+.++.+.+.+...+.++.+.|+++|
T Consensus       268 ~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~G  346 (388)
T COG0156         268 FIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGL-VLLPSESPIIPVILGDEERALEASRALLEEG  346 (388)
T ss_pred             eeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCCCCeeeeEeCCHHHHHHHHHHHHHCC
Confidence            4    4677777777778776555567788888888888877766653 3357788888888865556788889999889


Q ss_pred             cEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492          388 VMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH  421 (423)
Q Consensus       388 I~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~  421 (423)
                      |.+.+..+   +.+...+|++++.   .++++.+.+++..
T Consensus       347 i~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~  386 (388)
T COG0156         347 IYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE  386 (388)
T ss_pred             eeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence            99987665   5566899999874   5555555555554

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.95  E-value=9.4e-26  Score=226.06  Aligned_cols=315  Identities=18%  Similarity=0.206  Sum_probs=225.9

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-C-----Ccc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~-----~~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ....++.+..++..+..+.+++........| |     ..|    ..++++.+++++|++.+++.+|+|+++++..++.+
T Consensus        69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a  148 (447)
T PRK00451         69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA  148 (447)
T ss_pred             CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH
Confidence            5678888888887777766665432211224 3     223    23455777888999888999999999999988887


Q ss_pred             hc-CCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          166 VL-DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       166 l~-~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      +. .+||+|+++.+.|+.+...++.    .|++++.+|.+++ .+|++++++.+. +++++|++++| ||||.+.+.+++
T Consensus       149 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-~~t~~v~l~~p-n~tG~v~~l~~I  225 (447)
T PRK00451        149 VRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-DDTAAVVVQYP-NFFGVIEDLEEI  225 (447)
T ss_pred             HHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-CCeEEEEEECC-CCCCeeCCHHHH
Confidence            74 7899999999999888876554    6999999998777 899999999997 68999999999 899999999999


Q ss_pred             HHHHcC-CCEEEE--ccCCccccCCCchhhhhccCCcEEEEc---cChhhhcccCccccccccCHHHHHHHH--------
Q 014492          241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLR---TFSKRAGLAGLRVGYGAFPLSIIEYLW--------  306 (423)
Q Consensus       241 ~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~g~~G~R~G~i~~~~~~~~~l~--------  306 (423)
                      .++|+. |+++++  |.+...+..      .....+.++++.   ++||.+++.|+|+||+++++++++.+.        
T Consensus       226 ~~~a~~~~~~~iv~~d~~~~g~~~------~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~  299 (447)
T PRK00451        226 AEIAHAGGALFIVGVDPVSLGLLK------PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETV  299 (447)
T ss_pred             HHHHHHCCCEEEEEcChHHhccCC------CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeec
Confidence            999998 888887  543221111      012334446655   677777888999999999998887731        


Q ss_pred             --------------------HhcCCCCCc--HHHH-HHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC
Q 014492          307 --------------------RAKQPYNVS--VAAE-VAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS  361 (423)
Q Consensus       307 --------------------~~~~~~~~~--~~~~-~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~  361 (423)
                                          +.....+..  ...+ .++..++.  ..+++++.++++.++++++.+.|++++++.+. +
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~  378 (447)
T PRK00451        300 DADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-D  378 (447)
T ss_pred             ccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-C
Confidence                                111112221  1122 23322222  34678899999999999999999998776665 4


Q ss_pred             CceEEE--EEeCCCCCHHHHHHHHHhCCcEEE-eCCC--CCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          362 YSNFIL--CEVTSGMDAKKLKDDLAKMGVMIR-HYNN--KELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~--~~~~~~~~~~~l~~~L~~~gI~v~-~~~~--~~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      +++|.+  ++++  .+..++.++|.++||.+. ++..  +...+++|+++   .+.+++++|.++|+.+
T Consensus       379 ~~~~~~~~v~~~--~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~  445 (447)
T PRK00451        379 GPFFNEFVVRLP--KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEV  445 (447)
T ss_pred             CCeEEEEEEecC--CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            445543  5553  467899999998887642 2221  23457999996   5677888888888764

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.95  E-value=1e-25  Score=221.47  Aligned_cols=279  Identities=18%  Similarity=0.216  Sum_probs=204.1

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~  199 (423)
                      .+||+++..+|++++++++|.  +++++++|+++++..++.+++++||+|+++.|.|..+.    ..++..|++++.++.
T Consensus        59 ~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~  136 (400)
T PRK06234         59 SRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT  136 (400)
T ss_pred             cCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence            456889999999999999995  35778888888999999889999999999999886433    345678999999974


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i  276 (423)
                           .|++++++.+. +++++|++++|+||||.+.+.+++.++++.   |+++|+|++|..+.... ..    ..+..+
T Consensus       137 -----~d~e~l~~~i~-~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~-~l----~~g~Di  205 (400)
T PRK06234        137 -----SNLEEVRNALK-ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR-PL----QLGADV  205 (400)
T ss_pred             -----CCHHHHHHHhc-cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC-ch----hhCCcE
Confidence                 27999999997 689999999999999999999999999986   89999999998665421 11    224569


Q ss_pred             EEccChhhhcccCccc-cccccCHHHHHHHHHhc----CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc
Q 014492          277 VLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK  351 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~  351 (423)
                      ++.|+||.++.+|.|+ ||++++++++++++...    ....+++.....+...|+.   +..+.++..++..++.+.|+
T Consensus       206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t---l~~r~~~~~~na~~~a~~L~  282 (400)
T PRK06234        206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT---LQIRMEKHCKNAMKVAKFLE  282 (400)
T ss_pred             EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc---HHHHHHHHHHHHHHHHHHHH
Confidence            9999999999889875 99999999888876432    1245666666655555544   44555666678888888888


Q ss_pred             cCCCCe-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014492          352 DVPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN-----------------  395 (423)
Q Consensus       352 ~~~~~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~-----------------  395 (423)
                      +.+.+. + +|                +.|..+.++++++ .....|++.|.-.++.+.-|+.                 
T Consensus       283 ~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~  362 (400)
T PRK06234        283 SHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTA  362 (400)
T ss_pred             cCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCH
Confidence            765432 1 22                2345667888632 2245666666544444432211                 


Q ss_pred             ------CCCCCeEEEEecChhhHHHHHHHH
Q 014492          396 ------KELKGYVRVSVGKPEHTDALMECL  419 (423)
Q Consensus       396 ------~~~~~~iRis~~~~~~~~~l~~al  419 (423)
                            .-.++.||||++.++ .++|.+-+
T Consensus       363 ~~~~~~gi~~~l~R~svGlE~-~~dl~~dl  391 (400)
T PRK06234        363 EERKEAGISDGLVRLSVGLED-VDDIIADL  391 (400)
T ss_pred             HHHHhcCCCCCeEEEEeCCCC-HHHHHHHH
Confidence                  012468999999765 35554433

>PRK06460 hypothetical protein; Provisional

Probab=99.95  E-value=6e-26  Score=221.31  Aligned_cols=218  Identities=16%  Similarity=0.176  Sum_probs=169.0

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc----hhhHHHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~g~~~~~v~~~  200 (423)
                      ++.++...+|++++++++|.+. .+++++| ++++..++.+++++||+|+++.|.|    ..|...++..|+++..++.+
T Consensus        41 r~~~p~~~~L~~~lA~l~g~~~-~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~  118 (376)
T PRK06460         41 REANPTVLELTKKIVELENAEM-GVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG  118 (376)
T ss_pred             CCCCccHHHHHHHHHHHhCCCc-EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC
Confidence            3466788999999999999754 5666555 5899999999999999999987654    45667778899999988753


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                      +     .+.+++.+. +++|+|++++|+||||.+++.+++.++|+. |+++|+|++|..+... ..   + ..+.++++.
T Consensus       119 ~-----~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~~---l-~~~~divv~  187 (376)
T PRK06460        119 S-----DNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-KP---L-ELGADIVVH  187 (376)
T ss_pred             C-----HHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-Ch---h-hcCCCEEEe
Confidence            2     234444443 689999999999999999999999999987 9999999999854321 11   1 234569999


Q ss_pred             cChhhhccc-CccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492          280 TFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       280 S~SK~~g~~-G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                      |+||.++.. +.|.||+++++++++++.+.+..++.+.. ...+..+++..++++.+.+++.++++++.+.|++.+.+
T Consensus       188 S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~-~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v  264 (376)
T PRK06460        188 SASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLD-PHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKV  264 (376)
T ss_pred             ecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCC-HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            999987522 36799999999999999877766654322 23445566667889999999999999999999987654

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.95  E-value=2e-25  Score=218.50  Aligned_cols=306  Identities=18%  Similarity=0.178  Sum_probs=225.1

Q ss_pred             CCCCHHHHHHHhcC-C----CCCCCCCcc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC----CCCeEEE
Q 014492          107 YGPPPEVREALGQL-K----FPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDKIVD  175 (423)
Q Consensus       107 ~~~~~~v~~al~~~-~----~~~~Y~~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~----~gd~Vl~  175 (423)
                      .++.|.+.+++.+. .    ....|+...  ..++++.+++++|.+++++++++|+++++..++..+..    +|++|++
T Consensus        30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~  109 (371)
T PRK13520         30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVV  109 (371)
T ss_pred             cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEe
Confidence            34567777777552 1    111233322  25799999999998877889999999999988876654    5789999


Q ss_pred             cCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEcc
Q 014492          176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE  254 (423)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~De  254 (423)
                      ..+.|..+...++..|++++.+|.+.++.+|++++++.+. +++++|++++++|+||.+.|.+++.++|+. |+++++|+
T Consensus       110 ~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~  188 (371)
T PRK13520        110 PESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-DNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA  188 (371)
T ss_pred             cCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe
Confidence            9999999998888899999999987777899999999997 568788888899999999999999999987 99999999


Q ss_pred             CCccccCC--Cchh-hhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcCCC-----------CCcHHHH
Q 014492          255 AYTEFSGL--ESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-----------NVSVAAE  319 (423)
Q Consensus       255 ay~~~~~~--~~~~-~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~-----------~~~~~~~  319 (423)
                      +|..+...  .... .......-..+..|.+| |+++|.++|+++. ++++++.+... .++           +.+....
T Consensus       189 a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~  266 (371)
T PRK13520        189 AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVD-TPYLTSKKQATLTGTRSGAGV  266 (371)
T ss_pred             cchhHHHHhhcCCCCccccCCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhccc-CccccCCCCcceEeeccChHH
Confidence            99865421  1110 00111222345557778 6778889997775 66677665321 111           1233445


Q ss_pred             HHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014492          320 VAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK  396 (423)
Q Consensus       320 ~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~  396 (423)
                      .++..+++.  .+.+++.+++..++++++.+.|++++ +. +.+...+++.++++   +..++.+.|.++||.++.+.  
T Consensus       267 ~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~---~~~~v~~~L~~~gi~v~~~~--  340 (371)
T PRK13520        267 AATYAVMKYLGREGYRKVVERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDP---NPDEVREKLRERGWRVSVTR--  340 (371)
T ss_pred             HHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecC---CHHHHHHHHHHCCceeccCC--
Confidence            555566653  34467888899999999999999885 44 44556778888875   57899999999999998754  


Q ss_pred             CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          397 ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       397 ~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                       ..+++||++.   +.++++++.++|+.+
T Consensus       341 -~~~~iRis~~~~~t~edi~~~~~~l~~~  368 (371)
T PRK13520        341 -CPEALRIVCMPHVTREHIENFLEDLKEV  368 (371)
T ss_pred             -CCCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence             2468999984   667777777777653

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.95  E-value=2e-25  Score=221.82  Aligned_cols=318  Identities=16%  Similarity=0.137  Sum_probs=222.1

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCC------C-cchHH----HHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLK---FPYIYP------D-PESRR----LRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~------~-~g~~~----lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ++.++|..++++  .+|.+++++....   ++.+++      . .....    .|+.+++++|.+..+|++++| ++++.
T Consensus        25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sg-t~al~  101 (416)
T PRK00011         25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSG-SQANA  101 (416)
T ss_pred             hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCc-hHHHH
Confidence            556999999998  5789999986531   111111      1 11222    345789999998777777776 56888


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHH-----HHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      .++.+++++||+|+++.|+|..+..     .....|++++.++.+ +++.+|++++++.+++.++++|++++++|  |..
T Consensus       102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~  179 (416)
T PRK00011        102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRP  179 (416)
T ss_pred             HHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCc
Confidence            9999999999999999999975422     112346788888865 45789999999999755899999876655  567


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP  311 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~  311 (423)
                      .+.+++.++|+. |+++|+|++|... ...+.....+.  ...+++.|+||.+  +|.|.||++++ +++++++.+...+
T Consensus       180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~  255 (416)
T PRK00011        180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFP  255 (416)
T ss_pred             cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCc
Confidence            899999999987 9999999998632 21111111111  2348899999965  78899999996 6888888776654


Q ss_pred             CCC---cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeCC-CCCHHHHHHHH
Q 014492          312 YNV---SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS-GMDAKKLKDDL  383 (423)
Q Consensus       312 ~~~---~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~~-~~~~~~l~~~L  383 (423)
                      +..   ....+.++..++..  .+++++.+++++++++++.+.|++++ +.+.+  ..++++|+.+++ +.+..++.+.|
T Consensus       256 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L  334 (416)
T PRK00011        256 GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAAL  334 (416)
T ss_pred             cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHH
Confidence            322   22223322222221  24567888999999999999999876 44433  345889999853 44778899999


Q ss_pred             HhCCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhhh
Q 014492          384 AKMGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~~~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~l  422 (423)
                      .++||.++.+..      +..+.++|++..       +.++++++.++|+++
T Consensus       335 ~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~  386 (416)
T PRK00011        335 EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADV  386 (416)
T ss_pred             HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHH
Confidence            999999974321      223567999642       356788888888763

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.95  E-value=1.7e-25  Score=220.29  Aligned_cols=317  Identities=16%  Similarity=0.227  Sum_probs=213.6

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+++.++|+..+.  +.++ .+|++.+++.+ +..    ...|..+...++.+.+++..+  .+++++++|+++++..++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~~al  105 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVECAI  105 (389)
T ss_pred             CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHHHHH
Confidence            4567899997752  2333 46888888876 221    112333445678888888764  468999999999999998


Q ss_pred             HHh----cCCCC----eEEEcCCCchhhHHHHHHCCCeEEEe----cCCCCCC----CCHHHHHHHhhcCCceEEEEcCC
Q 014492          164 RCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       164 ~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~----~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      +..    ..+||    +|++.++.|+.+...+...+......    |..+++.    .|++++++.+. .++++|+++.+
T Consensus       106 ~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~avivep~  184 (389)
T PRK01278        106 KTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT-PNTAAILIEPI  184 (389)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-CCeEEEEEecc
Confidence            866    44565    89999999998776665544432222    1112222    58999999997 58999999988


Q ss_pred             CCCcC-cCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492          228 NNPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       228 ~NPtG-~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      +||+| .+++.+.+++|++.    |+++|+||+|.++...+....  ..+..+.   +.|+||.++ +|+|+||++++++
T Consensus       185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~  260 (389)
T PRK01278        185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD---IMAVAKGIG-GGFPLGACLATEE  260 (389)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC---EEEEehhcc-CCcceEEEEEcHH
Confidence            99999 67788887777664    999999999998754332111  1111122   357899998 8999999999999


Q ss_pred             HHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCC-CCeecCCCceEEEEEeCCC
Q 014492          301 IIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVP-FLNPYPSYSNFILCEVTSG  373 (423)
Q Consensus       301 ~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~-~~~~~p~~~~~~~~~~~~~  373 (423)
                      +++.+.....  .++.+++++.++.++|+..+ -+...++++++.+++.+.|+    +.+ .+....+.|.+++++++  
T Consensus       261 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~--  337 (389)
T PRK01278        261 AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL-APGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCV--  337 (389)
T ss_pred             HHhccCCCCCCCCCCccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEe--
Confidence            8887755433  35788999999887775310 01122223333333333332    233 22223456788888885  


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.++++.|.++||.+.+++    .+++||+++...+.+++.+++++|
T Consensus       338 ~~~~~~~~~l~~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l  382 (389)
T PRK01278        338 VPNRDLVQALRDEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERL  382 (389)
T ss_pred             cCHHHHHHHHHHCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence            367899999998999999875    579999975422345666666654

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.95  E-value=3.6e-25  Score=218.77  Aligned_cols=314  Identities=16%  Similarity=0.133  Sum_probs=220.3

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-C--C--CCCCC-------CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQL-K--F--PYIYP-------DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~--~--~~~Y~-------~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ++|+.+... +.++.+++++.+. .  .  .+...       ....+++|+.+++++|+++++|++++|++++++.++..
T Consensus         5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~   83 (402)
T TIGR02006         5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG   83 (402)
T ss_pred             EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence            778776554 4578888887652 1  1  11100       11245789999999999999999999999999998876


Q ss_pred             hc----CCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          166 VL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       166 l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      +.    ++||+|++..++|+.+...+   +..|++++.++.++++.+|++++++.+. ++++++++++++||||.+.|.+
T Consensus        84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~v~~~~n~tG~~~~~~  162 (402)
T TIGR02006        84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-DDTILVSIMHVNNEIGVIQDIA  162 (402)
T ss_pred             HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECCCcCceecccHH
Confidence            53    68999999999998655443   4469999999987777899999999996 6799999999999999999999


Q ss_pred             HHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------
Q 014492          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------  308 (423)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------  308 (423)
                      +|.++++. |+++++|++++.... +  . .+...+-.+++.|.+|.+|.+|  +|+++.+++....+...         
T Consensus       163 ~I~~l~~~~g~~livD~a~a~g~~-~--~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~  236 (402)
T TIGR02006       163 AIGEICRERKVFFHVDAAQSVGKI-P--I-NVNELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERG  236 (402)
T ss_pred             HHHHHHHHcCCEEEEEcchhcCCc-c--c-CccccCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCC
Confidence            99999987 999999999974322 1  1 1123344588888999877546  78887765433322211         


Q ss_pred             cCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC---Cc-eEEEEEeCCCCCHHHHHHHH
Q 014492          309 KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS---YS-NFILCEVTSGMDAKKLKDDL  383 (423)
Q Consensus       309 ~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~-~~~~~~~~~~~~~~~l~~~L  383 (423)
                      ...++.+.....++..+++. .++++...++++++++++.+.|++++.+.+...   .. ..+.+.++ +.+.+++...|
T Consensus       237 ~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~-~~~~~~~~~~l  315 (402)
T TIGR02006       237 MRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN-YVEGESLIMAL  315 (402)
T ss_pred             ccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe-CcCHHHHHHhc
Confidence            11235566666666566643 245677888999999999999988876654321   11 11123443 34566666555


Q ss_pred             HhCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          384 AKMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                        ++|.++.|...                   ...++||+|++   +.+|.+++.++|+.+
T Consensus       316 --~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~  374 (402)
T TIGR02006       316 --KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSA  374 (402)
T ss_pred             --CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence              58887755331                   01479999986   566777777777653

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.94  E-value=8.9e-25  Score=212.39  Aligned_cols=296  Identities=16%  Similarity=0.147  Sum_probs=210.0

Q ss_pred             CCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC---------------e
Q 014492          109 PPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---------------K  172 (423)
Q Consensus       109 ~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd---------------~  172 (423)
                      +++++++++.+.... .++.. -..++++.+++++|.  +++++++|+++++.+++.+++++||               +
T Consensus        25 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~e  101 (363)
T TIGR01437        25 VSDEVADAQKRGAQN-YFEIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNE  101 (363)
T ss_pred             CCHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccce
Confidence            678999999874321 12222 356788888888886  4789999999999999999999998               8


Q ss_pred             EEEcCCCchhh----HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE-EcCCCCCcCcCCCHHHHHHHHcC-
Q 014492          173 IVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILEM-  246 (423)
Q Consensus       173 Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~~-  246 (423)
                      |+++.|.|..|    ...+...|++++.++.  ++.+|++++++++. +++++++ +++|+||+|.+.+.+++.++|+. 
T Consensus       102 Vi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~-~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~  178 (363)
T TIGR01437       102 VVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT-EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEH  178 (363)
T ss_pred             EEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC-hhceEEEEEecCCCCcCCcCCHHHHHHHHHHc
Confidence            99999877655    4666778999999986  35799999999997 6888766 57899999999999999999997 


Q ss_pred             CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----C---CCcHHHH
Q 014492          247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y---NVSVAAE  319 (423)
Q Consensus       247 ~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~---~~~~~~~  319 (423)
                      |+++|+|++|..-.      ......+..+++.|++|.+  .|++.|+++.++++++.+......    +   ..+..+.
T Consensus       179 gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl  250 (363)
T TIGR01437       179 NLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGL  250 (363)
T ss_pred             CCeEEEECCCCCch------HHHHHcCCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHH
Confidence            99999999997211      1111223458889999965  688899999998888876443221    1   1222233


Q ss_pred             HHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCCce-----EEEEEeC-CCCCHHHHHHHHHhCC--c
Q 014492          320 VAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSYSN-----FILCEVT-SGMDAKKLKDDLAKMG--V  388 (423)
Q Consensus       320 ~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~~~-----~~~~~~~-~~~~~~~l~~~L~~~g--I  388 (423)
                      .++...+..  +..+..+.+.++++++.+.|++++++.+.   +..+.     -+.++.. .+.+..++.+.|.++|  |
T Consensus       251 ~aAl~~~~~--~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I  328 (363)
T TIGR01437       251 TAALEQYLS--TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAI  328 (363)
T ss_pred             HHHHHHHHc--cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCE
Confidence            333333322  12233334445677899999998777653   21111     1223331 2678999999998777  6


Q ss_pred             EEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492          389 MIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  422 (423)
                      .+++.  +...+.+|+++.  +++|.+.+.++|+++
T Consensus       329 ~~r~~--~~~~~~~~l~~~~~~~~e~~~~~~~l~~~  362 (363)
T TIGR01437       329 YTRGY--KANEGIIEIDPRSVTGGQLDIIVERIREI  362 (363)
T ss_pred             EEeee--eecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence            66653  344678888865  467788888888765

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.94  E-value=3.9e-25  Score=216.63  Aligned_cols=280  Identities=16%  Similarity=0.169  Sum_probs=202.7

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++.+++++|. ++.+++++| +.++..++.+++++||+|+++.|.|......    ++..|+++..++.
T Consensus        56 ~r~~~pt~~~Le~~lA~l~G~-~~al~~~sG-~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~  133 (386)
T PRK06767         56 SRLGNPTVKLFEERMAVLEGG-EEALAFGSG-MAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM  133 (386)
T ss_pred             cCCCCcchHHHHHHHHHHhCC-CcEEEECCH-HHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence            457888889999999999995 356656555 5688888888999999999999988754333    3345666665542


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           .|++++++++. +++++|++++|+||||.+.+.+++.++++. |+++|+|++|....... ..    ..+..+++
T Consensus       134 -----~d~~~l~~~i~-~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~-pl----~~g~Div~  202 (386)
T PRK06767        134 -----ETEADIENKIR-PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR-PL----ELGCDAVV  202 (386)
T ss_pred             -----CCHHHHHHhhC-cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hcCCcEEE
Confidence                 47899999997 689999999999999999999999999987 99999999997443221 11    12335888


Q ss_pred             ccChhhhcccCccc-cccccCHHHHHHHHHh-cCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA-KQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~-~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|+||.++.+|.|+ ||++++++.++++.+. ...  ..++++.+.++...|+   .+..+.++.+++..++.+.|++++
T Consensus       203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~---tl~~r~~~~~~~a~~la~~L~~~p  279 (386)
T PRK06767        203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK---TLAVRMDRHCDNAEKIVSFLKNHD  279 (386)
T ss_pred             ecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999998888885 8999998887765432 221  2346665555544443   345666777899999999999987


Q ss_pred             CCe-e-cC----------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------C-----------------CC
Q 014492          355 FLN-P-YP----------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------K-----------------EL  398 (423)
Q Consensus       355 ~~~-~-~p----------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~------~-----------------~~  398 (423)
                      .+. + +|          ..|..+.++++++ .+...|.+.|...++.++-|+.      +                 -.
T Consensus       280 ~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~  359 (386)
T PRK06767        280 AVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIY  359 (386)
T ss_pred             CccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCC
Confidence            765 2 33          3456777888632 3567788888777766654322      0                 12


Q ss_pred             CCeEEEEecChhhHHHHHHHHh
Q 014492          399 KGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       399 ~~~iRis~~~~~~~~~l~~al~  420 (423)
                      ++.||||++.++ .++|.+-|+
T Consensus       360 ~~l~R~svGlE~-~~dl~~dl~  380 (386)
T PRK06767        360 DNLIRLSVGLES-WEDIVSDLE  380 (386)
T ss_pred             CCeEEEEeccCC-HHHHHHHHH
Confidence            468999999765 455554443

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.94  E-value=7.4e-25  Score=213.31  Aligned_cols=230  Identities=17%  Similarity=0.180  Sum_probs=177.2

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|+++++++.|.+.  .++++|+++++..++. ++++||+|+++.|.|+.    +...++..|++++.++.
T Consensus        47 ~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~~-ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  123 (366)
T PRK08247         47 SRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVMS-LFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT  123 (366)
T ss_pred             cCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHH-HhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence            56788889999999999999754  3667777889988764 78999999999999975    34455668999999874


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           .|+++++++++ +++++|++++|+||+|...+.+++.++++. |+++|+|++|....... +.    ..+.++++
T Consensus       124 -----~d~~~l~~~i~-~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-p~----~~g~di~i  192 (366)
T PRK08247        124 -----ASLKAIEQAIT-PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-PL----EEGADIVI  192 (366)
T ss_pred             -----CCHHHHHHhcc-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-ch----hcCCcEEE
Confidence                 38899999997 589999999999999999999999999987 99999999995332211 11    23456999


Q ss_pred             ccChhhhccc-CccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~-G~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|+||.++.. +++.|+++++ +++.+++...+..  ..++++.+..+...++   .+....++.+++++.+.+.|++.+
T Consensus       193 ~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~---tl~~r~~~~~~~a~~l~~~L~~~p  269 (366)
T PRK08247        193 HSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK---TLALRMRQHEENAKAIAAFLNEQP  269 (366)
T ss_pred             eecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999988632 4688999986 6777777655433  4567777777776665   344555667999999999999987


Q ss_pred             CCee--cCC-CceEEEEEeC
Q 014492          355 FLNP--YPS-YSNFILCEVT  371 (423)
Q Consensus       355 ~~~~--~p~-~~~~~~~~~~  371 (423)
                      .+..  +|+ +++|.| ++.
T Consensus       270 ~v~~v~~P~~gg~~sf-~~~  288 (366)
T PRK08247        270 GVTDVLYPGRGGMLSF-RLQ  288 (366)
T ss_pred             CeeEEecCCcCcEEEE-EEC
Confidence            6652  664 555554 774

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.94  E-value=9.6e-25  Score=213.02  Aligned_cols=300  Identities=17%  Similarity=0.179  Sum_probs=209.3

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014492           98 VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP  177 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~  177 (423)
                      |+++++.+..+..+.     ....+ .+|+++...+|+++++++.|  .+++++++|+++++..++.+++++||+|+++.
T Consensus        26 i~~ss~~~~~~~~~~-----~~~~Y-~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~   97 (382)
T TIGR02080        26 IYLSTTYNFTGFNEP-----RAYDY-SRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPH   97 (382)
T ss_pred             eeCCceeEeCCcCcc-----CCCcc-cCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcC
Confidence            677777655432211     11223 57888889999999999998  46899999999999999999999999999999


Q ss_pred             CCchhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEE
Q 014492          178 PTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (423)
Q Consensus       178 p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~  252 (423)
                      |+|......    ....|+++..++     ..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+++|+
T Consensus        98 p~y~~~~~~~~~~~~~~~~~v~~~d-----~~d~~~l~~ai~-~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv  171 (382)
T TIGR02080        98 DCYGGTYRLLNALAKKGCFRVLFVD-----QGDEQALRAALA-QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV  171 (382)
T ss_pred             CCcHHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence            999853332    222355666554     247999999997 689999999999999999999999999987 999999


Q ss_pred             ccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC
Q 014492          253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN  328 (423)
Q Consensus       253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~  328 (423)
                      |++|..+.... ...    .+..++++|+||.++ .+|++.|++++ ++++++++...+..  ..++++.+..+...+  
T Consensus       172 D~a~~~~~~~~-pl~----~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l--  244 (382)
T TIGR02080       172 DNTFLSPALQN-PLA----LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGL--  244 (382)
T ss_pred             ECCCcccccCC-chh----hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHccc--
Confidence            99998654322 111    122488999999875 46789999876 67788877765544  356666655544333  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEEEEeCCCCC-HHHHHHHHHhCCcE
Q 014492          329 PIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILCEVTSGMD-AKKLKDDLAKMGVM  389 (423)
Q Consensus       329 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~~~~~~~~~-~~~l~~~L~~~gI~  389 (423)
                       +.+..+.++..++...+.+.|++.+.+. + +|                +.|..+.+++.++.. ...|++.|.--++.
T Consensus       245 -~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~  323 (382)
T TIGR02080       245 -RTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTLA  323 (382)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceEe
Confidence             4566667777899999999998876543 2 23                235567788853221 23455554321222


Q ss_pred             EEeCCC----------------------C-CCCCeEEEEecChhhHHHHHHHHh
Q 014492          390 IRHYNN----------------------K-ELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       390 v~~~~~----------------------~-~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      +.-|+.                      . -.++.||||++.++ .++|.+-|+
T Consensus       324 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~-~~dl~~dl~  376 (382)
T TIGR02080       324 ESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLED-ADDLIADLE  376 (382)
T ss_pred             ccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCC-HHHHHHHHH
Confidence            221110                      0 11468999999865 466655554

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.94  E-value=1.5e-24  Score=213.91  Aligned_cols=312  Identities=16%  Similarity=0.189  Sum_probs=215.8

Q ss_pred             CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCC---CC-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~---~~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .++++++|+..+..  .+| .+|.+.+++.+ +..   .. .+..+...+|.+.++++.+.  +.+++++++++|++.++
T Consensus        37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~Al  114 (396)
T PRK04073         37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETAI  114 (396)
T ss_pred             CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHHH
Confidence            45778999976632  343 46888888876 221   11 12333456788889888763  68999999999999998


Q ss_pred             HHhcC---------CC-CeEEEcCCCchhhH-HHHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492          164 RCVLD---------PG-DKIVDCPPTFTMYE-FDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPK  220 (423)
Q Consensus       164 ~~l~~---------~g-d~Vl~~~p~y~~~~-~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (423)
                      +....         +| ++|+...-+|+... ......+..            +..+|     ..|++++++.+. .+++
T Consensus       115 k~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~-~~~~  188 (396)
T PRK04073        115 KAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIP-----YGDLEALKAAIT-PNTA  188 (396)
T ss_pred             HHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeC-----CCCHHHHHHhcc-cCeE
Confidence            86531         34 67888877776433 222222211            12222     127899999886 6789


Q ss_pred             EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCcccc
Q 014492          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G  293 (423)
                      +|++++++||||.+++    .+++.++|+. |+++|+||+|.+|...+...  ...+..++   +.++||.+|.+|+|+|
T Consensus       189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd---i~~~sK~lg~gg~~ig  265 (396)
T PRK04073        189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD---MYILGKALGGGVFPIS  265 (396)
T ss_pred             EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC---EEEecccccCCCCcce
Confidence            9999999999999987    4567777765 99999999999876543222  11122222   3357999998889999


Q ss_pred             ccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC--CCeecCCCceEEEEE
Q 014492          294 YGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFILCE  369 (423)
Q Consensus       294 ~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~p~~~~~~~~~  369 (423)
                      |+++++++++.+...  ...|+.+++++.++.++|+..+ -+...++.+++++++.+.|++++  .+...++.|+|++++
T Consensus       266 ~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~-~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~  344 (396)
T PRK04073        266 CVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLE-EEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVE  344 (396)
T ss_pred             EEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEE
Confidence            999999999887643  2346789999999998886321 12344666777888888887763  233345668899998


Q ss_pred             eCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhh
Q 014492          370 VTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMH  421 (423)
Q Consensus       370 ~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~  421 (423)
                      ++  .++.++.+.|.++||.+.+..    +++|||++   .+.++++++.++|++
T Consensus       345 ~~--~~~~~~~~~l~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~  393 (396)
T PRK04073        345 LN--EPARPYCEALKEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKA  393 (396)
T ss_pred             ec--chHHHHHHHHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHH
Confidence            85  357789999999999998643    47999995   355555666555544

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.94  E-value=1.2e-24  Score=210.93  Aligned_cols=277  Identities=16%  Similarity=0.080  Sum_probs=204.0

Q ss_pred             CC-CcchHHHHHHHHH----HhCCC--CCcEEEeCCHHHHHHHHHHHhcC------------CC--CeEEEcCCCchhhH
Q 014492          126 YP-DPESRRLRAALAK----DSGLE--SDHILVGCGADELIDLIMRCVLD------------PG--DKIVDCPPTFTMYE  184 (423)
Q Consensus       126 Y~-~~g~~~lr~~ia~----~~g~~--~~~i~~t~G~~~al~~~~~~l~~------------~g--d~Vl~~~p~y~~~~  184 (423)
                      |+ .++..++++++++    ++|++  ++++++|+|+++++..++.+++.            ++  +.|+++.++|..+.
T Consensus        30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~  109 (345)
T cd06450          30 WDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE  109 (345)
T ss_pred             cccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH
Confidence            63 4456666666654    45874  45899999999999999987742            23  47888999999998


Q ss_pred             HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492          185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (423)
Q Consensus       185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~  258 (423)
                      ..++..|++++.+|.++++.+|++++++.+.+     .+++++++++|+||||.+.+.+++.++|+. |+++++|++|..
T Consensus       110 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~  189 (345)
T cd06450         110 KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG  189 (345)
T ss_pred             HHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH
Confidence            88888899999999877778999999999963     168889999999999999999999999987 999999999987


Q ss_pred             ccCCCchhhh-hcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHH
Q 014492          259 FSGLESRMEW-VKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVK  336 (423)
Q Consensus       259 ~~~~~~~~~~-~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  336 (423)
                      +......... ... .+-..+..|++|.++ ++.++|+++.+                 .+.+.++...+.. +.+++.+
T Consensus       190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~-----------------~~~~~~~l~~l~~-~g~~~~~  250 (345)
T cd06450         190 FLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR-----------------ALKLWATLRRFGR-DGYGEHI  250 (345)
T ss_pred             HHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH-----------------HHHHHHHHHHHhH-HHHHHHH
Confidence            6532111110 111 123456779999654 77889988766                 3444455555543 4567888


Q ss_pred             HHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---
Q 014492          337 EALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---  408 (423)
Q Consensus       337 ~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---  408 (423)
                      ++..++++++.+.|++++.+.+ .+..++++.+.+++    +.+..++.+.|.++|+.+.++.....++++|++++.   
T Consensus       251 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~  330 (345)
T cd06450         251 DRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLT  330 (345)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCC
Confidence            8889999999999999876654 34567777778764    256678999999887666544333356799999864   


Q ss_pred             -hhhHHHHHHHHhh
Q 014492          409 -PEHTDALMECLMH  421 (423)
Q Consensus       409 -~~~~~~l~~al~~  421 (423)
                       .++++++.++|++
T Consensus       331 t~~di~~l~~~l~~  344 (345)
T cd06450         331 TRDDADALLEDIER  344 (345)
T ss_pred             CHHHHHHHHHHHHh
Confidence             3555666665553

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=2.4e-24  Score=210.36  Aligned_cols=245  Identities=16%  Similarity=0.191  Sum_probs=186.5

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh-hHHHH---HHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDA---AVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~---~~~g~~~~~v~~  199 (423)
                      .+||++....|++++|+++|.  +.+++++|+++++..++.+++++||+|+++.|+|+. +....   ...|.++..++ 
T Consensus        47 ~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-  123 (386)
T PRK08045         47 SRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-  123 (386)
T ss_pred             eCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence            568999999999999999994  469999999999999999999999999999999984 33222   22445666654 


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                          ..|++++++.+. +++++|++++|+||||.+++.+++.++++. |+++|+|++|..+... .+..    ....+++
T Consensus       124 ----~~d~e~l~~~l~-~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-~pl~----~gaDivv  193 (386)
T PRK08045        124 ----QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-NPLA----LGADLVL  193 (386)
T ss_pred             ----CCCHHHHHHhcc-cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Cchh----hCCCEEE
Confidence                358999999997 689999999999999999999999999987 9999999999865432 2221    1224899


Q ss_pred             ccChhhhc-ccCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g-~~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|++|.++ ..+.+.|+++. ++++++++......  ..++++.+..+...|+.   +..+.++..+++..+.+.|++.+
T Consensus       194 ~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---l~~R~~~~~~na~~la~~L~~~p  270 (386)
T PRK08045        194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---LVPRMELAQRNAQAIVKYLQTQP  270 (386)
T ss_pred             eecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---HHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999875 45577898877 57787777655443  35778888877777764   77788888999999999999876


Q ss_pred             CCe-e-cC----------------CCceEEEEEeCCCCC-HHHHHHHHH
Q 014492          355 FLN-P-YP----------------SYSNFILCEVTSGMD-AKKLKDDLA  384 (423)
Q Consensus       355 ~~~-~-~p----------------~~~~~~~~~~~~~~~-~~~l~~~L~  384 (423)
                      .+. + +|                +.|..+.+.+.++.+ ...|++.|.
T Consensus       271 ~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~  319 (386)
T PRK08045        271 LVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLS  319 (386)
T ss_pred             CEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhcc
Confidence            543 2 22                224567777753211 245555554

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.94  E-value=4.1e-24  Score=209.34  Aligned_cols=320  Identities=16%  Similarity=0.154  Sum_probs=224.0

Q ss_pred             CCCCCeeEcCCC--CCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhc
Q 014492           92 RKPEDIVKIDAN--ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~  167 (423)
                      ..++.++|+..+  ...++.+|++.+++.+ +.....++.....++++.+++.+.-.++ .+++++++++++..+++...
T Consensus        26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar  105 (375)
T PRK04260         26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIAR  105 (375)
T ss_pred             CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHH
Confidence            456778999776  4557788999999876 3222234444456788888887643444 46889999999998888542


Q ss_pred             --CCCCeEEEcCCCchhhH-HHHHHCCCeEEE------ecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC-
Q 014492          168 --DPGDKIVDCPPTFTMYE-FDAAVNGAAVVK------VPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-  236 (423)
Q Consensus       168 --~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~------v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~-  236 (423)
                        .++++|++.+..|+... ......|.+...      ++. ......|++.+++.+. .++.+|++++++|++|.+.+ 
T Consensus       106 ~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~~~~~  184 (375)
T PRK04260        106 KATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN-KNTAAVMLELVQGESGVLPAD  184 (375)
T ss_pred             HhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC-CCeEEEEECCeECCCCCcCCC
Confidence              34578888888887432 232222222110      000 0001248999999886 57889999999999999876 


Q ss_pred             ---HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--
Q 014492          237 ---DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--  308 (423)
Q Consensus       237 ---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--  308 (423)
                         .+++.++|+. |+++|+||+|.++...+....  .....+.   +.||||.++ +|+|+||+++++++.+.+...  
T Consensus       185 ~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~~~~~~~~~~~  260 (375)
T PRK04260        185 KDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKSSLGGAFGYGSH  260 (375)
T ss_pred             HHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC---EEEeccccc-CCcceEEEEEcHHHHhhcCCCCC
Confidence               4677777775 999999999987754432222  2222233   338999998 899999999999988877542  


Q ss_pred             cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014492          309 KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK  385 (423)
Q Consensus       309 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~  385 (423)
                      ...++.+++.+.++.++|+.   +++.++.++..+..++.+.+.+.+.+.+...+..|+++|++++  .+..++.+.|.+
T Consensus       261 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~l~~  338 (375)
T PRK04260        261 GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT--ADLSQLVEAARD  338 (375)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEec--CcHHHHHHHHHh
Confidence            23467789999999888854   4567777777888888888887776544444568999999984  467889999999


Q ss_pred             CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +||.+.+..    .+.+||++....+.+++.++++++
T Consensus       339 ~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l  371 (375)
T PRK04260        339 KGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAIL  371 (375)
T ss_pred             CCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHH
Confidence            999998753    478999995433346666666654

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.93  E-value=2.2e-24  Score=203.01  Aligned_cols=316  Identities=19%  Similarity=0.158  Sum_probs=231.5

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCC-CC-------CCCCCc---chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQLK-FP-------YIYPDP---ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~-~~-------~~Y~~~---g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      .|+||.+.. .+..|+++++|.... ..       |.|+..   ..++.|+.+|+.+|+++++|++|+|++|+.++++..
T Consensus         2 miYlD~~AT-Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g   80 (386)
T COG1104           2 MIYLDNAAT-TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKG   80 (386)
T ss_pred             ccccccccc-CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHh
Confidence            367776544 345688888887631 11       223211   245889999999999999999999999999999987


Q ss_pred             h--cC----CCCeEEEcCCCchhhHHHHHHC---CCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          166 V--LD----PGDKIVDCPPTFTMYEFDAAVN---GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       166 l--~~----~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      .  ..    .|.+|+++.-.|+.....++..   |.+|..+|.+.++.+|+++|+++++ +++.+|.+.+.||.||++.|
T Consensus        81 ~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-~~T~LVSim~aNnE~G~IQp  159 (386)
T COG1104          81 AALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-PDTILVSIMHANNETGTIQP  159 (386)
T ss_pred             hHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-CCceEEEEEecccCeeeccc
Confidence            3  22    4678999999998776666654   9999999998888999999999998 78999999999999999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH-HHHH------Hh
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII-EYLW------RA  308 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~-~~l~------~~  308 (423)
                      ++++.++|+. ++++++|.+++..-   -+ -.+....-++...|-+|..|..|  +|.++.++.+. ..+.      +-
T Consensus       160 I~ei~~i~k~~~i~fHvDAvQa~Gk---ip-i~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g  233 (386)
T COG1104         160 IAEIGEICKERGILFHVDAVQAVGK---IP-IDLEELGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERG  233 (386)
T ss_pred             HHHHHHHHHHcCCeEEEehhhhcCc---ee-ccccccCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCC
Confidence            9999999997 99999999998322   11 11222234466777889888778  68787654332 1111      11


Q ss_pred             cCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccC-CCCeecCC----CceEEEEEeCCCCCHHHHHHH
Q 014492          309 KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDV-PFLNPYPS----YSNFILCEVTSGMDAKKLKDD  382 (423)
Q Consensus       309 ~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~----~~~~~~~~~~~~~~~~~l~~~  382 (423)
                      .+..+.|.++..+...+++. .+.++....++...|++|.+.|.+. +.+.+...    -.+.+.+.+| +...+.+...
T Consensus       234 ~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~-gv~gE~ll~~  312 (386)
T COG1104         234 LRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP-GVEGESLLLA  312 (386)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC-CCcHHHHHHh
Confidence            23356788887777777765 3557778888999999999999875 65554332    3456677787 7889999999


Q ss_pred             HHhCCcEEEeCCCC-------------------CCCCeEEEEecChhhHHHHHHHHhh
Q 014492          383 LAKMGVMIRHYNNK-------------------ELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       383 L~~~gI~v~~~~~~-------------------~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      |..+||.+..|+..                   ...+.||||++...+.++++.+++.
T Consensus       313 L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~  370 (386)
T COG1104         313 LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEA  370 (386)
T ss_pred             ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHH
Confidence            99999999977651                   1136899999854444444444443

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.93  E-value=1.1e-24  Score=214.00  Aligned_cols=271  Identities=18%  Similarity=0.187  Sum_probs=189.9

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC--CC-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           97 IVKIDANENPYGPPPEVREALGQL--KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~--~~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      .|.++.... +..+.++.+.....  .+ ..+|+++...+|++++|+++|.++. + ++++++.++..++.+++++||+|
T Consensus        31 pi~~~~~~~-~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~-~-~~~sG~~Ai~~~l~~~l~~Gd~V  107 (398)
T PRK07504         31 ALFLTQGFV-YDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDA-R-ATASGMAAVTAAILCQVKAGDHV  107 (398)
T ss_pred             CeECCCCcc-CCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCee-e-EecCHHHHHHHHHHHHhCCCCEE
Confidence            367766432 23334443333211  11 1457888889999999999998654 3 45566778877777789999999


Q ss_pred             EEcCCCchhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CC
Q 014492          174 VDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (423)
Q Consensus       174 l~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~  248 (423)
                      +++.|.|..+...    ++..|++++.++     ..|+++++++++ +++|+|++++|+||||.+++.+++.++++. |+
T Consensus       108 l~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~dl~~I~~la~~~gi  181 (398)
T PRK07504        108 VAARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGA  181 (398)
T ss_pred             EEcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCcEecCHHHHHHHHHHcCC
Confidence            9999999865433    345799998886     478999999996 689999999999999999999999999987 99


Q ss_pred             EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHH-HHHhcC--CCCCcHHHHHHHHH
Q 014492          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEY-LWRAKQ--PYNVSVAAEVAACA  324 (423)
Q Consensus       249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~-l~~~~~--~~~~~~~~~~a~~~  324 (423)
                      ++|+|++|..+... ...    ..+..+++.|+||.++.+|.|+| +++++++.+.+ +.....  ...+++..+..+..
T Consensus       182 ~lvvD~a~a~~~~~-~~~----~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~  256 (398)
T PRK07504        182 KLVVDNVFATPLFQ-KPL----ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLK  256 (398)
T ss_pred             EEEEECCccccccC-Cch----hhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence            99999999865432 111    22456899999999988999985 67677776653 332211  23455555555554


Q ss_pred             HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014492          325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLA  384 (423)
Q Consensus       325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~  384 (423)
                      .|   +.+..+.++..++..++.+.|++.+.+. + +|                +.|..+.+++.++ .....|++.|.
T Consensus       257 ~L---~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~  332 (398)
T PRK07504        257 GL---ETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALK  332 (398)
T ss_pred             cc---chHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCC
Confidence            44   4466667777788999999998876543 1 22                2366778888532 22344555553

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=1.2e-24  Score=211.54  Aligned_cols=293  Identities=17%  Similarity=0.128  Sum_probs=208.8

Q ss_pred             CCCHHHHHHHhcCC-CCCCCCC------c-----chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC----CC-
Q 014492          108 GPPPEVREALGQLK-FPYIYPD------P-----ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PG-  170 (423)
Q Consensus       108 ~~~~~v~~al~~~~-~~~~Y~~------~-----g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~----~g-  170 (423)
                      ++++.+.+++.+.. .....|.      .     -.+++|+.+++++|+++++|++|+|++++++.++..+..    +| 
T Consensus         9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~   88 (353)
T TIGR03235         9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK   88 (353)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence            45678888886521 1011111      0     145899999999999999999999999999999987753    55 


Q ss_pred             CeEEEcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-
Q 014492          171 DKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-  246 (423)
Q Consensus       171 d~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-  246 (423)
                      +.|++....|+.+.   ..++..|++++.++.+.++.+|++++++.++ +++++|++++++||||.+++.+++.++++. 
T Consensus        89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~  167 (353)
T TIGR03235        89 KHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-PDTLLVSIMHVNNETGSIQPIREIAEVLEAH  167 (353)
T ss_pred             CeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-CCCEEEEEEcccCCceeccCHHHHHHHHHHc
Confidence            77888877776443   3345579999999987777899999999996 689999999999999999999999999987 


Q ss_pred             CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH--HH---------hcCCCCCc
Q 014492          247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL--WR---------AKQPYNVS  315 (423)
Q Consensus       247 ~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l--~~---------~~~~~~~~  315 (423)
                      |+++|+|+++......    ..+...+..+++.|.+|.+|.+|  +|+++.+++.....  ..         ....++.+
T Consensus       168 ~~~~ivD~a~~~g~~~----~~~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (353)
T TIGR03235       168 EAFFHVDAAQVVGKIT----VDLSADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLP  241 (353)
T ss_pred             CCEEEEEchhhcCCcc----ccccccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCC
Confidence            9999999998743321    11223345578889999876556  79888877643221  11         01124455


Q ss_pred             HHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCC---ceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014492          316 VAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSY---SNFILCEVTSGMDAKKLKDDLAKMGVMI  390 (423)
Q Consensus       316 ~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~---~~~~~~~~~~~~~~~~l~~~L~~~gI~v  390 (423)
                      .....++.++++. .+..++.+++++++++++++.|++.+ +.+. +..   ..++.+.++ +.+.+++.+.|.+ ||.+
T Consensus       242 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~-~~~~~~v~~~L~~-~i~v  318 (353)
T TIGR03235       242 VHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPHILNFSID-GVNSEALIVNLRA-DAAV  318 (353)
T ss_pred             hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCCEEEEEeC-CcCHHHHHHHHhC-CeEE
Confidence            6665666666553 23467788999999999999998854 4432 221   234555555 6788899999965 8999


Q ss_pred             EeCCCCC----CCCeEEEEecChh
Q 014492          391 RHYNNKE----LKGYVRVSVGKPE  410 (423)
Q Consensus       391 ~~~~~~~----~~~~iRis~~~~~  410 (423)
                      ++|..+.    .+.++|.+++..+
T Consensus       319 ~~g~~~~~~~~~~~~~l~~~g~~~  342 (353)
T TIGR03235       319 STGSACSSSKYEPSHVLQAMGLDT  342 (353)
T ss_pred             EchhhcCCCCCCCCHHHHHcCCCH
Confidence            9876532    2346888887654

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.93  E-value=3.1e-24  Score=209.85  Aligned_cols=281  Identities=19%  Similarity=0.195  Sum_probs=204.5

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++.+++++|.  +.+++++|+++++..++.+++++||+|+++.+.|..    +...++..|++++.++.
T Consensus        49 ~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~  126 (380)
T TIGR01325        49 SRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP  126 (380)
T ss_pred             ecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence            457778889999999999996  467889999999999999999999999999988853    34456678999999875


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                      +     |++++++.+. +++++|++++|+||+|.+.+.+++.++|+. |+++|+|++|..+.... ..    ..+..+++
T Consensus       127 ~-----d~~~l~~~i~-~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~-pl----~~g~Divv  195 (380)
T TIGR01325       127 T-----DLNAWEAAVK-PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQ-PL----KLGADVVV  195 (380)
T ss_pred             C-----CHHHHHHhcC-CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCCEEE
Confidence            3     7899999886 689999999999999999999999999987 99999999998654322 11    22345888


Q ss_pred             ccChhhhcccCccc-cccccCHHHHHHHHHhcCCC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       279 ~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      .|++|.++.+|.++ |++++++++++.+......+  .+++...   ..++...+.+..+.++..+++.++.+.|++.+.
T Consensus       196 ~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a---~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~  272 (380)
T TIGR01325       196 YSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNA---WVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQ  272 (380)
T ss_pred             eeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHH---HHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            89999998788776 78888888888877654433  3344443   334444455667778888899999999998764


Q ss_pred             Ce-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC----------C------------
Q 014492          356 LN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN----------N------------  395 (423)
Q Consensus       356 ~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~----------~------------  395 (423)
                      +. + +|                ..|..+.+++.+......|.+.|.--.+.+.-|+          .            
T Consensus       273 v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~  352 (380)
T TIGR01325       273 VQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAA  352 (380)
T ss_pred             ccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHh
Confidence            43 1 22                2355677888521224455555531111111111          0            


Q ss_pred             -CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          396 -KELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       396 -~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                       .-.++.||||++.++ .++|.+-+++
T Consensus       353 ~gi~~~liR~svGlE~-~~dl~~dl~~  378 (380)
T TIGR01325       353 AGIGDGLVRLSVGLED-VDDLIADLKR  378 (380)
T ss_pred             cCCCCCeEEEEeccCC-HHHHHHHHHh
Confidence             011468999999876 4777666553

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=3.7e-24  Score=209.89  Aligned_cols=216  Identities=15%  Similarity=0.142  Sum_probs=169.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~  200 (423)
                      +|+++...+|++.++++.|.  +..++++++++++..++.+++++||+|+++.|+|....    ..++..|++++.++  
T Consensus        60 r~~~p~~~~le~~lA~l~g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd--  135 (398)
T PRK08249         60 RNTNPTVQAFEEKVRILEGA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE--  135 (398)
T ss_pred             CCCChHHHHHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC--
Confidence            56778889999999999995  34556666678999999989999999999999998643    34556899988876  


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                         ..|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... ..    ..+..+++.
T Consensus       136 ---~~d~e~l~~~i~-~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l----~~~~Divv~  206 (398)
T PRK08249        136 ---TGDHEQIEAEIA-KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PL----ALGADLVIH  206 (398)
T ss_pred             ---CCCHHHHHHhcC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-ch----hhCCCEEec
Confidence               358999999997 689999999999999999999999999987 99999999998654322 11    123348889


Q ss_pred             cChhhhcccCccc-cccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492          280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       280 S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                      |+||.+|..|.++ |++++++++++++...+..  ..+++..+..+...+   +.+..+.++..+++.++.+.|++.+.+
T Consensus       207 S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l---~tL~~R~~~~~~na~~la~~L~~~p~v  283 (398)
T PRK08249        207 SATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGM---KTLKLRVRQQQESAMALAKYLQTHPKV  283 (398)
T ss_pred             cCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence            9999998667665 7788888888888765543  345666555544444   445666777788999999999887644

>PRK07505 hypothetical protein; Provisional

Probab=99.93  E-value=1.4e-23  Score=207.51  Aligned_cols=314  Identities=15%  Similarity=0.097  Sum_probs=205.0

Q ss_pred             CCCCCeeEcCCCCC-CCCCCHHHHHHHhc-CC-CC--C-C-----CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP--Y-I-----YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~--~-~-----Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      .+++.++|+..+.+ .+..+|++.+|+.+ +. ++  . .     +......++++.++++++.  +.+++++| +++..
T Consensus        43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~sG-~~a~~  119 (402)
T PRK07505         43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFTSC-SAAHL  119 (402)
T ss_pred             cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEECCh-HHHHH
Confidence            45678999976422 22567999988876 22 11  1 1     1122356899999999986  55556655 45777


Q ss_pred             HHHHHhc----CCCC-eEEEcCCCch-hhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          161 LIMRCVL----DPGD-KIVDCPPTFT-MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       161 ~~~~~l~----~~gd-~Vl~~~p~y~-~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      .++..+.    .+|+ .|++.+..|+ ...  ......+.+++.+|.     .|++++++.+. .+++++++++|+||||
T Consensus       120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~-~~~~~~vl~~p~~~~G  193 (402)
T PRK07505        120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICK-TNKTVAYVADGVYSMG  193 (402)
T ss_pred             HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHh-cCCCEEEEEecccccC
Confidence            6665432    2232 3656665554 321  112224567777773     48899999886 4678999999999999


Q ss_pred             cCCCHHHHHHHHcC-CCEEEEccCCccccCC--Cc--hhhhhc--cCCcEEEEccChhhhcccCcccccccc-CHHHHHH
Q 014492          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGL--ES--RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEY  304 (423)
Q Consensus       233 ~~~~~~~l~~i~~~-~~~li~Deay~~~~~~--~~--~~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~  304 (423)
                      .+++.+++.+||+. ++++|+||+|....++  +.  ......  ..+++++++|+||.+|++|   ||++. ++++++.
T Consensus       194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~  270 (402)
T PRK07505        194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIEL  270 (402)
T ss_pred             CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHH
Confidence            99999999999987 9999999999643222  11  122233  3677899999999999777   88764 7888888


Q ss_pred             HHHhcCCC----CCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHH
Q 014492          305 LWRAKQPY----NVSVAAEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK  378 (423)
Q Consensus       305 l~~~~~~~----~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~  378 (423)
                      +.....++    +++++++.++.++++  ..+++.+..++++++.+.+...+...    +......+.++.+++..++.+
T Consensus       271 ~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~  346 (402)
T PRK07505        271 ILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----QSGSFLPIRLIYIGDEDTAIK  346 (402)
T ss_pred             HHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCCHHHHHH
Confidence            87766654    355677777777775  33445555566665555443332111    011111222334432234678


Q ss_pred             HHHHHHhCCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          379 LKDDLAKMGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       379 l~~~L~~~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +.+.|.++||.+++...+.   ..++|||+++   +.++++++.++|++
T Consensus       347 ~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~  395 (402)
T PRK07505        347 AAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKE  395 (402)
T ss_pred             HHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHH
Confidence            9999999999999864432   3469999998   77777777777765

>PLN02651 cysteine desulfurase

Probab=99.93  E-value=4.5e-24  Score=208.33  Aligned_cols=306  Identities=18%  Similarity=0.120  Sum_probs=217.1

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcCC-CCCCCCC-----------cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           99 KIDANENPYGPPPEVREALGQLK-FPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~~-~~~~Y~~-----------~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      +|+.+... +.++.+.+++.+.. .....|.           .-.+++|+.+++++|.++++|++|+|++++++.++..+
T Consensus         2 Yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~   80 (364)
T PLN02651          2 YLDMQATT-PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV   80 (364)
T ss_pred             cccCcCCC-CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence            45554443 45688888886521 1111111           11457899999999998899999999999988877654


Q ss_pred             ----cCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          167 ----LDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       167 ----~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                          .++||+|++....|+.+...   ++..|++++.++.+.++.+|++++++.++ ++++++++++++|+||.+.|.++
T Consensus        81 ~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~v~~~~n~tG~~~~l~~  159 (364)
T PLN02651         81 MHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-PDTALVSVMAVNNEIGVIQPVEE  159 (364)
T ss_pred             HHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEECCCCCceecccHHH
Confidence                47899999998888754433   33579999999987777899999999997 68999999999999999999999


Q ss_pred             HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------c
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K  309 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~  309 (423)
                      +.++|+. |+++++|.+++.....    ..+...+-.+++.|.+|.+|  ...+|+++.+++....+...         .
T Consensus       160 I~~~~~~~g~~~~vD~a~~~g~~~----~~~~~~~~D~~~~s~hK~~g--p~G~g~l~v~~~~~~~l~p~~~g~~~~~~~  233 (364)
T PLN02651        160 IGELCREKKVLFHTDAAQAVGKIP----VDVDDLGVDLMSISGHKIYG--PKGVGALYVRRRPRVRLEPLMSGGGQERGR  233 (364)
T ss_pred             HHHHHHHcCCEEEEEcchhhCCcc----cCcccCCCCEEEechhhhCC--CCceEEEEEcCCCCCCCCccccCCCccCCc
Confidence            9999997 9999999999843211    11223455688899999533  33478888876554433211         1


Q ss_pred             CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeecCC------CceEEEEEeCCCCCHHHHHH
Q 014492          310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYPS------YSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~------~~~~~~~~~~~~~~~~~l~~  381 (423)
                      ..++.+..+..++.++|+. .+..++.+++.++.++++.+.|++ ++++.+...      ....+.+.++ +.+.+++..
T Consensus       234 ~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  312 (364)
T PLN02651        234 RSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA-YVEGESLLM  312 (364)
T ss_pred             cCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC-CCCHHHHHH
Confidence            2346677777777766654 223467788889999999999975 555554321      1346667776 778899999


Q ss_pred             HHHhCCcEEEeCCCC--C-----------------CCCeEEEEecChhhHHHH
Q 014492          382 DLAKMGVMIRHYNNK--E-----------------LKGYVRVSVGKPEHTDAL  415 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~--~-----------------~~~~iRis~~~~~~~~~l  415 (423)
                      .|.+  |.++.|...  .                 ..+.||+|++...+.+++
T Consensus       313 ~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~di  363 (364)
T PLN02651        313 GLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEV  363 (364)
T ss_pred             HhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHc
Confidence            8865  888866531  1                 137999999854444443

>PRK14012 cysteine desulfurase; Provisional

Probab=99.93  E-value=4.8e-24  Score=211.00  Aligned_cols=311  Identities=16%  Similarity=0.104  Sum_probs=211.8

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCC-----------cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQL-K--FPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~-----------~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ++|+.+... +.++.+.+++.+. .  ....-+.           ...+++|+.+++++|.++++|++++|+++++++++
T Consensus         5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l   83 (404)
T PRK14012          5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI   83 (404)
T ss_pred             EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence            678776554 4567888887652 1  1000010           12457899999999998899999999999999988


Q ss_pred             HHhc----CCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          164 RCVL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       164 ~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      .++.    ++||.|++++++|+.+...+   +..|++++.++.++++.+|++++++.+. .+++++++++++||||.++|
T Consensus        84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~  162 (404)
T PRK14012         84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-DDTILVSIMHVNNEIGVIQD  162 (404)
T ss_pred             HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECcCCCccchhh
Confidence            7764    78999999999997665443   3469999999987777899999999997 68999999999999999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------  308 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------  308 (423)
                      .+++.++|+. |+++|+|++++.....   . .+...+-.+++.|++|.+| |+ ++|+++.+++...++...       
T Consensus       163 ~~~I~~la~~~g~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~  236 (404)
T PRK14012        163 IAAIGEICRERGIIFHVDAAQSVGKVP---I-DLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHE  236 (404)
T ss_pred             HHHHHHHHHHcCCEEEEEcchhcCCcc---c-CcccCCCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCcc
Confidence            9999999987 9999999999743211   1 1112334477789999776 43 588888876543222211       


Q ss_pred             --cCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC------CceEEEEEeCCCCCHHHH
Q 014492          309 --KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS------YSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       309 --~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~------~~~~~~~~~~~~~~~~~l  379 (423)
                        ....+.+.....+..+++.. ..+.++..++.++.++++.+.|++++.+.+.+.      ...++++.+.   +.+++
T Consensus       237 ~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~  313 (404)
T PRK14012        237 RGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV---EGESL  313 (404)
T ss_pred             CCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc---CHHHH
Confidence              01123334333333344432 234556778888899999999988765554211      1224555543   34566


Q ss_pred             HHHHHhCCcEEEeCCCC-------------------CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          380 KDDLAKMGVMIRHYNNK-------------------ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~-------------------~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ...|.  ++.|..+...                   ...+.|||++.   +.++.+++.++|+.
T Consensus       314 ~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~  375 (404)
T PRK14012        314 IMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK  375 (404)
T ss_pred             HHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            66663  6666544220                   12478999986   45666667666654

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.93  E-value=7.1e-24  Score=207.74  Aligned_cols=279  Identities=19%  Similarity=0.194  Sum_probs=199.1

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~  200 (423)
                      +|+++...++++.+++++|.  +++++++|+++++..++.+++++||+|+++.+.|....    ..++..|++++.++.+
T Consensus        57 r~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~  134 (390)
T PRK08133         57 RFTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT  134 (390)
T ss_pred             CCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence            45666678999999999995  46888999999999999999999999999999886433    3456689999999853


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                           |++++++.++ +++|+|++++|+||||.+.+.+++.++|+. |+++|+|++|....... +.    ..+..+++.
T Consensus       135 -----d~~~l~~~i~-~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-pl----~~g~Divv~  203 (390)
T PRK08133        135 -----DLDAWRAAVR-PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-PL----KLGADVVIH  203 (390)
T ss_pred             -----CHHHHHHhcC-cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEe
Confidence                 7899999997 689999999999999999999999999987 99999999997544321 11    123358899


Q ss_pred             cChhhhcccCccc-cccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492          280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       280 S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                      |+||.++.+|.++ |+++++++.++++......  ..+++..+.   .+++..+.+..+.++..+++..+.+.|++.+.+
T Consensus       204 S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~---~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v  280 (390)
T PRK08133        204 SATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAW---VFLKGLETLSLRMEAHSANALALAEWLEAHPGV  280 (390)
T ss_pred             ecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHH---HHHcccchHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            9999998889887 6777888877766644333  234444433   344444466777777788999999999887644


Q ss_pred             e-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEE----------eCCC-----C------
Q 014492          357 N-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIR----------HYNN-----K------  396 (423)
Q Consensus       357 ~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~----------~~~~-----~------  396 (423)
                      . + +|                +.|..+.+++.++ .....|++.|.--.+.+.          |...     .      
T Consensus       281 ~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~  360 (390)
T PRK08133        281 ERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAA  360 (390)
T ss_pred             eEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHh
Confidence            3 1 22                2355677788532 123445555531111111          1110     0      


Q ss_pred             --CCCCeEEEEecChhhHHHHHHHHh
Q 014492          397 --ELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       397 --~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                        -.++.||||++.++ .|+|.+-|+
T Consensus       361 ~gi~~~liR~svGlE~-~~dl~~dl~  385 (390)
T PRK08133        361 AGITEGLIRVAVGLED-VADIKADLA  385 (390)
T ss_pred             cCCCCCeEEEEeCcCC-HHHHHHHHH
Confidence              11468999999875 466665554

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.93  E-value=1.3e-23  Score=206.11  Aligned_cols=319  Identities=15%  Similarity=0.159  Sum_probs=207.9

Q ss_pred             CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHHHH
Q 014492           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~--~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ..++.++|+..|..  .++ .+|++.+++.+ +......+.....++++.+++++.-  ..+.+++++++++++..+++.
T Consensus        26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~  105 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKL  105 (377)
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHH
Confidence            45678999988752  233 56888888876 3221112222334566666666642  135899999999999999984


Q ss_pred             hc-CCC-CeEEEcCCCchhhHHH-HHHCCCeEE---EecCCCC--C--CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          166 VL-DPG-DKIVDCPPTFTMYEFD-AAVNGAAVV---KVPRKSD--F--SLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       166 l~-~~g-d~Vl~~~p~y~~~~~~-~~~~g~~~~---~v~~~~~--~--~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      .. -+| +.|++.++.|+..... ....+....   ..|...+  +  ..|++++++.+. .++++|+++.+++++|...
T Consensus       106 a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~~~  184 (377)
T PRK02936        106 ARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGVIP  184 (377)
T ss_pred             HHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCCcc
Confidence            32 234 6789999988743322 222222111   1111111  0  127899999886 6799999999999999774


Q ss_pred             -CHHHHH---HHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492          236 -NDEDLL---KILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (423)
Q Consensus       236 -~~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~  308 (423)
                       +.+.++   ++|+. |+++|+||+|.+|...+....  .....+.   +.++||.++ +|+|+||+++++++.+.+...
T Consensus       185 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~~~~~~~~~~  260 (377)
T PRK02936        185 ADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKKELGTAFGPG  260 (377)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc---EEEEccccc-CCCccEEEEEcHHHHhhccCC
Confidence             545554   45554 999999999988765443221  1222222   236899999 999999999999998887643


Q ss_pred             cC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCCCCCHHHHHHH
Q 014492          309 KQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAKKLKDD  382 (423)
Q Consensus       309 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~  382 (423)
                      ..  .++.+++.+.++.++|+..+ .+...++++++.+++.+.|++    ++.+....+.|.++|+++++  +...+.+.
T Consensus       261 ~~~~t~~~~~~~~aaa~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~--~~~~~~~~  337 (377)
T PRK02936        261 SHGSTFGGNPLAMAAAKEVLQVIK-QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE--EVAPVIEQ  337 (377)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc--hHHHHHHH
Confidence            32  35789999999999986531 123445555566666665554    44333234567899999963  36778888


Q ss_pred             HHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          383 LAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       383 L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++||.+.+.+    .+++||++....+.+++.+++++|
T Consensus       338 l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l  373 (377)
T PRK02936        338 LREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLL  373 (377)
T ss_pred             HHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHH
Confidence            889999998754    579999974333346666666655

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.93  E-value=2.2e-23  Score=204.52  Aligned_cols=311  Identities=14%  Similarity=0.122  Sum_probs=209.2

Q ss_pred             CCCCCCHHHHHHHhcC--CCC-------CCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492          105 NPYGPPPEVREALGQL--KFP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~--~~~-------~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      -.+..+|+++++..+.  .++       ..|+.. ...+|++++|+++|.+ +.+++++|.++.. .++.+++++||.|+
T Consensus         9 Lgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~-~~i~~l~~~GD~Vl   86 (392)
T PLN03227          9 LSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTS-STVAAFAKRGDLLV   86 (392)
T ss_pred             cCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHH-HHHHHhCCCCCEEE
Confidence            3445677777665542  111       125433 5789999999999975 7888999988777 56666899999999


Q ss_pred             EcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh----------cCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----------REKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----------~~~~~~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                      ++.+.|..+...++..+++++.++..+  .-|++.+.+.+.          ..++++|++++++||+|.+.+.+++.++|
T Consensus        87 ~~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~  164 (392)
T PLN03227         87 VDRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALK  164 (392)
T ss_pred             EeccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHH
Confidence            999999988887778888888777421  123444444443          13578899999999999999999999999


Q ss_pred             cC-CCEEEEccCCccccCCC---chhhhhc---cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCC-
Q 014492          245 EM-PILVVLDEAYTEFSGLE---SRMEWVK---KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV-  314 (423)
Q Consensus       245 ~~-~~~li~Deay~~~~~~~---~~~~~~~---~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~-  314 (423)
                      +. |+++|+||+|.....+.   ......+   ..+.++++.|+||.+|..|   |++++++++++.+......  ++. 
T Consensus       165 ~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---g~v~~~~~~~~~~~~~~~~~~~~~~  241 (392)
T PLN03227        165 EEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---GMTVGSEEVVDHQRLSGSGYCFSAS  241 (392)
T ss_pred             HHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---cEEecCHHHHHHHHHhCcCccccCC
Confidence            87 99999999998222221   1112111   2345789999999876444   9998999988777544322  333 


Q ss_pred             -cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--Ce--------ecCCCceEEEEEeCCCCC--------
Q 014492          315 -SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--LN--------PYPSYSNFILCEVTSGMD--------  375 (423)
Q Consensus       315 -~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~--------~~p~~~~~~~~~~~~~~~--------  375 (423)
                       ++..+.++..++......++.+++++++.+++.+.|++.+.  +.        .....++++.+.+.+...        
T Consensus       242 ~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~  321 (392)
T PLN03227        242 APPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETL  321 (392)
T ss_pred             CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhh
Confidence             46566666655543211346677888888999998875321  10        112346778888853211        


Q ss_pred             -HHHHHHHHHhCCcEEEeCCC-------CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          376 -AKKLKDDLAKMGVMIRHYNN-------KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       376 -~~~l~~~L~~~gI~v~~~~~-------~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       ..++++.|.++|+.+.+...       ...+..+|+++....+.++++++++.|
T Consensus       322 ~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l  376 (392)
T PLN03227        322 ILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVL  376 (392)
T ss_pred             HHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence             24788889999999975221       122568999998544445555555443

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.93  E-value=2.5e-23  Score=202.32  Aligned_cols=275  Identities=20%  Similarity=0.195  Sum_probs=193.9

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~  199 (423)
                      .+||++...+|++++++++  ..+.+++ +++++++..++.+++++||+|+++.|+|..+...+    +..|++++.++.
T Consensus        46 ~ry~~p~~~~Le~~lA~l~--~~~~v~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~  122 (366)
T PRK07582         46 GRASNPTWRALEAALGELE--GAEALVF-PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT  122 (366)
T ss_pred             ECCCCccHHHHHHHHHHHc--CCCEEEE-CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence            5689999999999999999  3455555 45557999999989999999999999998776544    347999999986


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                      ++.+    +    .+. +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|..... ..+..    .+..+++
T Consensus       123 ~~~~----~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~-~~p~~----~g~Divv  188 (366)
T PRK07582        123 AGMA----E----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLG-QRPLE----LGADLVV  188 (366)
T ss_pred             CChH----H----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccc-cCchh----cCCcEEE
Confidence            4321    1    222 578999999999999999999999999987 999999999964321 11221    2234888


Q ss_pred             ccChhhhc-ccCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g-~~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      +|+||.++ .+|+|+||+++ ++++++++...+..  ..++++....+...++.   ++.+.++..++...+.+.|++.+
T Consensus       189 ~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t---l~~R~~~~~~na~~la~~L~~~p  265 (366)
T PRK07582        189 ASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT---LGLRFARQCANALAVAELLAGHP  265 (366)
T ss_pred             ecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999874 46799999997 47787777655433  34566666656565553   45555677789999999998876


Q ss_pred             CCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe---CCC---------C---CCCCe
Q 014492          355 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH---YNN---------K---ELKGY  401 (423)
Q Consensus       355 ~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~---~~~---------~---~~~~~  401 (423)
                      .+. + +|                +.|..+.+++.   +.++..+.+.+.++....   |+.         .   ..++.
T Consensus       266 ~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~---~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~l  342 (366)
T PRK07582        266 AVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA---DAAAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGF  342 (366)
T ss_pred             CccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC---CHHHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCe
Confidence            543 2 22                14567778885   455666666666665531   110         0   12468


Q ss_pred             EEEEecChh---hHHHHHHHHhh
Q 014492          402 VRVSVGKPE---HTDALMECLMH  421 (423)
Q Consensus       402 iRis~~~~~---~~~~l~~al~~  421 (423)
                      ||+|++.++   ..++|.+||++
T Consensus       343 iR~svGlE~~~dli~dl~~al~~  365 (366)
T PRK07582        343 VRLSCGIEDTDDLVADLERALDA  365 (366)
T ss_pred             EEEEeccCCHHHHHHHHHHHHhh
Confidence            999998654   33444555543

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.93  E-value=6.8e-24  Score=207.82  Aligned_cols=217  Identities=15%  Similarity=0.146  Sum_probs=168.5

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++++|+++|.+  ..++++++++++..++.+++++||+|+++.|.|.    .+...+...|++++.++.
T Consensus        54 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~  131 (391)
T TIGR01328        54 SRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM  131 (391)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence            4578888899999999999964  3566777778999999989999999999999885    334445668999999885


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                      +     |++++++.+. +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|....... ..    .....+++
T Consensus       132 ~-----d~e~l~~~i~-~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-~~----~~g~Divv  200 (391)
T TIGR01328       132 A-----IPEEVKAHIK-DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-PV----ALGVDVVV  200 (391)
T ss_pred             C-----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-ch----hcCCCEEE
Confidence            3     7899999986 689999999999999999999999999987 99999999998544321 11    12344889


Q ss_pred             ccChhhhcccCcc-ccccccCHHHHHHHHHhcC--C--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492          279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--P--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV  353 (423)
Q Consensus       279 ~S~SK~~g~~G~R-~G~i~~~~~~~~~l~~~~~--~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~  353 (423)
                      .|+||.+|.+|.+ .|+++++++++++++....  .  ..+++.....+...|+   .+..+.++.+++.+++.+.|++.
T Consensus       201 ~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~---tl~~r~~~~~~na~~la~~L~~~  277 (391)
T TIGR01328       201 HSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK---TLNIRMKRHSENAMKVAEYLKSH  277 (391)
T ss_pred             ccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---cHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999988877 5788888998888775321  1  2455555554444443   34556777788888999999887


Q ss_pred             CCC
Q 014492          354 PFL  356 (423)
Q Consensus       354 ~~~  356 (423)
                      +.+
T Consensus       278 p~v  280 (391)
T TIGR01328       278 PAV  280 (391)
T ss_pred             CCc
Confidence            654

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.93  E-value=1e-23  Score=205.79  Aligned_cols=280  Identities=19%  Similarity=0.207  Sum_probs=203.9

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~  200 (423)
                      +|+++...+|++.+++++|.  +..++++++++++..++.+++++||+|+++.+.|....    ..++..|+++..++.+
T Consensus        36 r~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  113 (369)
T cd00614          36 RIGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD  113 (369)
T ss_pred             CCCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC
Confidence            45677788999999999985  45667777789999999999999999999999997544    3345689999988743


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                           |++++++.++ +++++|++++|+||+|.+.+.+++.++++. |+++|+|++|...... ...    ..+.++++.
T Consensus       114 -----d~~~l~~~i~-~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~----~~g~Divv~  182 (369)
T cd00614         114 -----DPEALEAAIK-PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPL----ELGADIVVH  182 (369)
T ss_pred             -----CHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-Chh----hhCCcEEEe
Confidence                 5899999996 589999999999999999999999999987 9999999999854431 111    234568999


Q ss_pred             cChhhhcccC-ccccccccCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |++|.++.+| .+.|++++++ ++++++.....  .+.+++..+.++...++.   +..+.++..++.+++.+.|++.+.
T Consensus       183 S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t---l~~r~~~~~~na~~la~~L~~~~~  259 (369)
T cd00614         183 SATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT---LPLRMERHSENALKVAEFLEKHPK  259 (369)
T ss_pred             ccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHHHHcCCC
Confidence            9999987665 7889999977 88888876654  345677776666566543   455677778899999999998775


Q ss_pred             Ce-e-cC----------------CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCC------------C---C-----
Q 014492          356 LN-P-YP----------------SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYN------------N---K-----  396 (423)
Q Consensus       356 ~~-~-~p----------------~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~------------~---~-----  396 (423)
                      +. + +|                +.|..+.+.+.+ ......|.+.|.--++.+.-|+            +   .     
T Consensus       260 v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~  339 (369)
T cd00614         260 VERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERA  339 (369)
T ss_pred             ccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHH
Confidence            42 2 33                346778888852 1223344444421111111110            0   0     


Q ss_pred             --C-CCCeEEEEecChhhHHHHHHHHhh
Q 014492          397 --E-LKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       397 --~-~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                        + .++.||||++.++ .++|.+.|++
T Consensus       340 ~~g~~~~liR~svGlE~-~~dl~~dl~~  366 (369)
T cd00614         340 AAGITPGLVRLSVGIED-VEDLIADLEQ  366 (369)
T ss_pred             hcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence              1 1468999999865 5777766654

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=1.1e-23  Score=206.75  Aligned_cols=218  Identities=17%  Similarity=0.170  Sum_probs=170.9

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++.++++.|. ++++++++| ++++.+++.+++++||+|+++.|+|..    +...++..|.+++.++.
T Consensus        55 ~R~~~p~~~~Le~~lA~l~g~-~~~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~  132 (405)
T PRK08776         55 TRSGNPTRDLLGEALAELEGG-AGGVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL  132 (405)
T ss_pred             cCCCChHHHHHHHHHHHHhCC-CceEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence            456777788999999999996 456655555 799999999999999999999999975    44555667889888874


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           .|++++++.++ .++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+.    ..+..+++
T Consensus       133 -----~d~~~l~~~i~-~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-~pl----~~gaDivv  201 (405)
T PRK08776        133 -----TDPRSLADALA-QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-KPL----EFGADLVL  201 (405)
T ss_pred             -----CCHHHHHHhcC-cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----cccCCEEE
Confidence                 37899999986 689999999999999999999999999987 9999999999753221 111    12334899


Q ss_pred             ccChhhhccc-Ccccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~-G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|.+|.++.+ ++..|+++. ++++.+++......  +.++++.+.++...   .+|++.+.++..++...+.+.|++.+
T Consensus       202 ~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~g---l~tl~~r~~~~~~na~~la~~L~~~p  278 (405)
T PRK08776        202 HSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRG---LRTLDARLRVHQENADAIAALLDGHA  278 (405)
T ss_pred             ecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhh---hCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999998755 467888877 56777777654433  45677766655544   46788889999999999999999876


Q ss_pred             CCe
Q 014492          355 FLN  357 (423)
Q Consensus       355 ~~~  357 (423)
                      .+.
T Consensus       279 ~v~  281 (405)
T PRK08776        279 AVN  281 (405)
T ss_pred             Cee
Confidence            553

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.93  E-value=3.9e-23  Score=202.32  Aligned_cols=312  Identities=17%  Similarity=0.125  Sum_probs=216.9

Q ss_pred             CCCCeeEcCCC-CCCCCCCHHHHHHHhcC--CCCCC-------CCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDAN-ENPYGPPPEVREALGQL--KFPYI-------YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~~--~~~~~-------Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++++|+.| +-.+..+|+++++..+.  .++.+       ++.. ...+|+++||+++|. ++.+++.+|.. +...
T Consensus       100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~-e~all~sSGy~-AN~~  177 (476)
T PLN02955        100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK-EDCLVCPTGFA-ANMA  177 (476)
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC-CcEEEECChHH-HHHH
Confidence            34678999876 45677889888776552  22211       1111 236799999999994 35566666665 4445


Q ss_pred             HHHHh--------------cCCCCeEEEcCCCchhhHHHHHHC----CCeEEEecCCCCCCCCHHHHHHHhhc--CCceE
Q 014492          162 IMRCV--------------LDPGDKIVDCPPTFTMYEFDAAVN----GAAVVKVPRKSDFSLNVELIADAVER--EKPKC  221 (423)
Q Consensus       162 ~~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~  221 (423)
                      ++.++              .+++|.|++..-.|......++..    +++++.++     ..|++.|++.++.  .+.++
T Consensus       178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~-----HND~~~Le~~L~~~~~~~~~  252 (476)
T PLN02955        178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR-----HCDMYHLNSLLSSCKMKRKV  252 (476)
T ss_pred             HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC-----CCCHHHHHHHHHhCCCCceE
Confidence            55555              245678888888999888888876    57777776     4478888888753  23456


Q ss_pred             EEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhh---hhc-cCCcEEEEccChhhhcccCccccccc
Q 014492          222 IFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVK-KHDNLIVLRTFSKRAGLAGLRVGYGA  296 (423)
Q Consensus       222 i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~  296 (423)
                      |++....+++|.+.+.+++.+|++. |+++|+||+|+.+..+.....   ..+ ..+.+++++||||++|..|   ||++
T Consensus       253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~  329 (476)
T PLN02955        253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIA  329 (476)
T ss_pred             EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceee
Confidence            6666889999999999999999987 999999999998775442222   221 2467899999999998777   9999


Q ss_pred             cCHHHHHHHHHhcCCC----CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492          297 FPLSIIEYLWRAKQPY----NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  372 (423)
Q Consensus       297 ~~~~~~~~l~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~  372 (423)
                      +++++++.+......+    ..++....++.++++....-...+++++++.+++.+.+   ++ .   ..+.++.+.+.+
T Consensus       330 gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~---G~-~---~~sPI~pI~ig~  402 (476)
T PLN02955        330 CSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS---GV-D---ISSPIISLVVGN  402 (476)
T ss_pred             cHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc---CC-C---CCCCEEEEEeCC
Confidence            9999999888766653    23444455555555432112346677888888887742   32 2   136677777765


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492          373 GMDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH  421 (423)
Q Consensus       373 ~~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~  421 (423)
                      ...+.++.++|+++||.+.+..+   +.+...+||+++.   .++++++.++|..
T Consensus       403 ~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~  457 (476)
T PLN02955        403 QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSS  457 (476)
T ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence            55677889999999999987665   4556689999975   4444555555443

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.93  E-value=3.1e-23  Score=204.01  Aligned_cols=217  Identities=16%  Similarity=0.175  Sum_probs=167.6

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++++++++|.+. . +++++++.++.+++..++++||+|+++.|.|..    +...++..|++++.++.
T Consensus        60 ~r~~~p~~~~le~~lA~l~g~~~-~-i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  137 (403)
T PRK07503         60 SRISNPTLALLEQRMASLEGGEA-A-VALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL  137 (403)
T ss_pred             eCCCCchHHHHHHHHHHHhCCCc-E-EEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence            45677888999999999999743 4 555566779999998899999999999998863    33445668999999875


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                      +     |++++++.++ +++|+|++++|+||||.+.+.++|.++|+. |+++|+|++|...... ....    .+..+++
T Consensus       138 ~-----d~~~l~~~i~-~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-~~l~----~g~Di~v  206 (403)
T PRK07503        138 T-----DPAALKAAIS-DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-RPLE----LGADLVV  206 (403)
T ss_pred             C-----CHHHHHHhcC-ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cchh----hCCCEEE
Confidence            2     7899999997 589999999999999999999999999987 9999999999855332 1221    2345899


Q ss_pred             ccChhhhcccC-ccccccccCHHHHHHHHHh--cC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV  353 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~--~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~  353 (423)
                      .|+||.++.+| .|.|+++.+++++++++..  ..  ...++++.+..+...|   +.+..+.++..++..++.+.|++.
T Consensus       207 ~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L---~tl~~r~~~~~~na~~~a~~L~~~  283 (403)
T PRK07503        207 HSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGL---KTLALRMDRHCASAQAVAEWLARH  283 (403)
T ss_pred             ccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCc---chHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999998765 7889999889888887632  22  2456666665554444   445555566668888888888877


Q ss_pred             CCC
Q 014492          354 PFL  356 (423)
Q Consensus       354 ~~~  356 (423)
                      +.+
T Consensus       284 p~v  286 (403)
T PRK07503        284 PAV  286 (403)
T ss_pred             CCc
Confidence            644

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.93  E-value=4e-23  Score=191.09  Aligned_cols=295  Identities=17%  Similarity=0.233  Sum_probs=192.7

Q ss_pred             CCC-CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHH-HHHHHH-HHh----cC---C-----CCeEEEcCCCchhhHHHH
Q 014492          124 YIY-PD-PESRRLRAALAKDSGLESDHILVGCGADE-LIDLIM-RCV----LD---P-----GDKIVDCPPTFTMYEFDA  187 (423)
Q Consensus       124 ~~Y-~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~-al~~~~-~~l----~~---~-----gd~Vl~~~p~y~~~~~~~  187 (423)
                      ..| +. .|.+++|+.+++.+|+++++|++..+++- .+.-++ .++    .+   |     .-+.+++.|+|..+...+
T Consensus        62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~  141 (425)
T PF12897_consen   62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT  141 (425)
T ss_dssp             TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred             cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence            557 44 37899999999999999999988665543 333222 222    11   1     236899999999999999


Q ss_pred             HHCCCeEEEecCCCCCCCCHHHHHHHhh-cCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-----CCEEEEccCCcccc
Q 014492          188 AVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFS  260 (423)
Q Consensus       188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-----~~~li~Deay~~~~  260 (423)
                      +.+|++.+.||+.++ ++|+|.+++.+. .+.+|.|++. --+||||.+|+.+..++++..     +..|+-|.+|.-..
T Consensus       142 E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHh  220 (425)
T PF12897_consen  142 EHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHH  220 (425)
T ss_dssp             HHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-B
T ss_pred             HhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEee
Confidence            999999999998655 899999999984 4678999965 448999999999999999986     89999999997433


Q ss_pred             C--CCc------hhh---hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhC
Q 014492          261 G--LES------RME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ  327 (423)
Q Consensus       261 ~--~~~------~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~  327 (423)
                      .  +..      .+.   ..+..++++.+.|.||.- .||-+++++.++++.++.+.+...  ..+..-+.|..-...+.
T Consensus       221 L~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~  299 (425)
T PF12897_consen  221 LYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFK  299 (425)
T ss_dssp             SSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHH
T ss_pred             ccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhc
Confidence            2  211      111   123478999999999964 699999999999999888876643  35677788988888898


Q ss_pred             ChH-----HHHHHHHHHHHHHHHHHHHHcc-CC---CCe--ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-
Q 014492          328 NPI-----YLEKVKEALIKERERLFKLLKD-VP---FLN--PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-  395 (423)
Q Consensus       328 ~~~-----~~~~~~~~~~~~~~~l~~~L~~-~~---~~~--~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-  395 (423)
                      +.+     ++++.++.++-..+.+.+.|++ ++   .+.  ..|.+|+|+++++.+| .++.+.+.+++.||.+.+.+. 
T Consensus       300 d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G-~AkrvV~lakeAGV~LT~AGAt  378 (425)
T PF12897_consen  300 DAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG-TAKRVVELAKEAGVALTPAGAT  378 (425)
T ss_dssp             SHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT--HHHHHHHHHHTTEE---TTTT
T ss_pred             ChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-hHHHHHHHHHHhCceeCCCCCC
Confidence            844     4556666666677766666643 33   222  3589999999999865 688999999999999998443 


Q ss_pred             -----CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          396 -----KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       396 -----~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                           .+.+..|||+.+.+. .++|..|++.+
T Consensus       379 fPyg~DP~D~nIRiAPS~P~-leel~~Am~~~  409 (425)
T PF12897_consen  379 FPYGKDPRDSNIRIAPSYPS-LEELETAMDVF  409 (425)
T ss_dssp             SGGG--TTS-EEEE--SSS--HHHHHHHHHHH
T ss_pred             CCCCCCCCCCcEEecCCCCC-HHHHHHHHHHH
Confidence                 234679999999876 58888888754

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.92  E-value=2e-23  Score=205.03  Aligned_cols=280  Identities=18%  Similarity=0.172  Sum_probs=200.7

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc----hhhHHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++.+|++.|.+  +.+++++++.++..++.+++++||+|+++...|    ..+...++..|++++.++.
T Consensus        65 ~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~  142 (403)
T PRK07810         65 SRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG  142 (403)
T ss_pred             eCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence            4678888899999999999953  566667777888888888999999999887555    4555667778999999973


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|........ .    ..+..+++
T Consensus       143 -----~d~~~l~~ai~-~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~----~~gaDivv  211 (403)
T PRK07810        143 -----EDLSQWEEALS-VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-L----PLGADVVV  211 (403)
T ss_pred             -----CCHHHHHHhcC-cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-h----hcCCcEEE
Confidence                 38999999997 689999999999999999999999999997 999999999985543221 1    22446899


Q ss_pred             ccChhhhcccCccc-cccccCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|++|.++..|.++ |+++++++.+. .++....  ...+++..+..+...|+   .+..+.++..++..++.+.|++.+
T Consensus       212 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~---tl~~R~~~~~~~a~~~a~~L~~~p  288 (403)
T PRK07810        212 YSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLE---TLALRVRHSNASALRIAEFLEGHP  288 (403)
T ss_pred             ccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999998788887 88888877654 3443322  23567777776665554   466777777888888889998876


Q ss_pred             CCe-e-cC----------------CCceEEEEEeCCCC--C---HHHHHHHHHhCCcEE----------EeCCC------
Q 014492          355 FLN-P-YP----------------SYSNFILCEVTSGM--D---AKKLKDDLAKMGVMI----------RHYNN------  395 (423)
Q Consensus       355 ~~~-~-~p----------------~~~~~~~~~~~~~~--~---~~~l~~~L~~~gI~v----------~~~~~------  395 (423)
                      .+. + +|                ..|..+.+++..+.  +   ..+|++.|.--++.+          .|...      
T Consensus       289 ~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~  368 (403)
T PRK07810        289 AVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMG  368 (403)
T ss_pred             CccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCCCccccccCC
Confidence            543 2 23                34667778886321  1   234555443111111          12110      


Q ss_pred             -------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          396 -------KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       396 -------~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                             .-.++.+|||++.++ .++|.+-|+
T Consensus       369 ~~~~~~~gi~~~lvR~svGlE~-~~dli~dl~  399 (403)
T PRK07810        369 PEGRAAIGLGDGVVRLSVGLED-TDDLIADLD  399 (403)
T ss_pred             HHHHHhcCCCCCeEEEEeccCC-HHHHHHHHH
Confidence                   012468999999875 466666554

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.92  E-value=4.2e-23  Score=201.07  Aligned_cols=217  Identities=16%  Similarity=0.123  Sum_probs=170.0

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh-hHHH---HHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFD---AAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~---~~~~g~~~~~v~~  199 (423)
                      .+|+++....|++++|++.|  .+++++++|+++++..++.+++++||+|+++.|+|.. +...   ....|++++.++ 
T Consensus        48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd-  124 (388)
T PRK08861         48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD-  124 (388)
T ss_pred             cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC-
Confidence            56788889999999999999  4799999999999999999999999999999999984 3322   334578888886 


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                          ..|++++++++. +++++|++++|+||||.+++.+++.++++. |+++|+|++|...... .+.    ..+..+++
T Consensus       125 ----~~d~e~l~~~i~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~-~pl----~~GaDivv  194 (388)
T PRK08861        125 ----QSDAAALDAALA-KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ-KPL----ELGADFVI  194 (388)
T ss_pred             ----CCCHHHHHHhcC-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC-CCc----ccCCCEEE
Confidence                358999999987 689999999999999999999999999987 9999999999854432 111    22345899


Q ss_pred             ccChhhhccc-CccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~-G~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|++|.++.+ +...|+++++ +++.++++..+..  ..+++.....+...|   +.+..+.++..++...+.+.|++.+
T Consensus       195 ~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl---~Tl~lR~~~~~~~a~~~a~~L~~~p  271 (388)
T PRK08861        195 HSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGI---RTLGARMRVHEESAQQILAYLQTQS  271 (388)
T ss_pred             eecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999987643 4678988874 5666666654443  345666655444444   3466677777888999999999876


Q ss_pred             CC
Q 014492          355 FL  356 (423)
Q Consensus       355 ~~  356 (423)
                      .+
T Consensus       272 ~v  273 (388)
T PRK08861        272 LV  273 (388)
T ss_pred             Ce
Confidence            54

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.92  E-value=4.6e-23  Score=203.75  Aligned_cols=313  Identities=16%  Similarity=0.203  Sum_probs=211.7

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+++.++||..+  ...+| .+|++.+++.+ +...    ..+..+...++.+.+++..+  .+.+++++++++++..++
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e~a~  114 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AERVFFANSGAEANEAAF  114 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHHHHH
Confidence            456789999776  23333 56888888876 2211    11222234578888888765  368999999999999999


Q ss_pred             HHhc--------CCCCeEEEcCCCchhhHHHH-HHCC------------CeEEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492          164 RCVL--------DPGDKIVDCPPTFTMYEFDA-AVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCI  222 (423)
Q Consensus       164 ~~l~--------~~gd~Vl~~~p~y~~~~~~~-~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (423)
                      +...        ...+.|+..+-+|++....+ ...|            .+++.+|     ..|++.+++.+. +++++|
T Consensus       115 klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aai  188 (403)
T PRK05093        115 KLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-----FNDLAAVKAVID-DHTCAV  188 (403)
T ss_pred             HHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-----CCCHHHHHHHhc-CCeEEE
Confidence            8441        12356777777776543222 2111            1222222     127899999886 578888


Q ss_pred             EEcCCCCCcCcCC--CHHHHHHH---HcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccc
Q 014492          223 FLTSPNNPDGSII--NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       223 ~l~~p~NPtG~~~--~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      +++ |.||+|-++  +.+.+++|   |+. |+++|+||+|.++.+.+....  ..+..+.   +.||||+++ +|+|+||
T Consensus       189 iie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~s~sK~l~-~G~rig~  263 (403)
T PRK05093        189 VVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD---ILTSAKALG-GGFPIGA  263 (403)
T ss_pred             EEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC---EEEeccccc-CCcceEE
Confidence            887 777777665  65555554   544 999999999998765443221  1111122   568999999 9999999


Q ss_pred             cccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEE
Q 014492          295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILC  368 (423)
Q Consensus       295 i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~  368 (423)
                      +++++++++.+.....  .++.+++.|.++.++|+... ..+..++++++++++.+.|+++.    .+...+..|.++|+
T Consensus       264 vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~  342 (403)
T PRK05093        264 MLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN-TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGA  342 (403)
T ss_pred             EEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEE
Confidence            9999999888865322  36678999998888775321 23456778888889998887752    22234567899999


Q ss_pred             EeCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          369 EVTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       369 ~~~~~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++...  ++.++++.|.++||.+.+.+    .+++||+++...+.+++.+++++|
T Consensus       343 ~l~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l  394 (403)
T PRK05093        343 ELKPQYKGRARDFLNAAAEEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARF  394 (403)
T ss_pred             EecCcchhHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence            986433  56789999999999998753    479999876543446677776665

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.92  E-value=8e-23  Score=202.15  Aligned_cols=315  Identities=13%  Similarity=0.116  Sum_probs=211.9

Q ss_pred             CCCCCeeEcCCCCCCCC---CCHHHHHHHhc-CC---CCC-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LK---FPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~---~~~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..++.++|+..+.....   .+|++.+++.+ +.   ... .+..+...+|.+.++++.+.  +.+++++++++|+..++
T Consensus        38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al  115 (401)
T PRK00854         38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAI  115 (401)
T ss_pred             CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence            35677899877643332   26888888765 22   111 12334467899999999874  58999999999999999


Q ss_pred             HHhcC---------CC-CeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492          164 RCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK  220 (423)
Q Consensus       164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (423)
                      +.+..         +| ++|++..-+|+.....+...+.             .+..+|     ..|++++++.+. ++++
T Consensus       116 ~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~i~-~~~~  189 (401)
T PRK00854        116 KAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-----FGDAEALEAAIT-PNTV  189 (401)
T ss_pred             HHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-----CCCHHHHHHHhC-CCeE
Confidence            87642         23 6788887777654333222221             222232     247899999996 6899


Q ss_pred             EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCcccc
Q 014492          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVG  293 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G  293 (423)
                      +|++++|+||+|.+++    .+++.++|+. |+++|+||+|..+...+....  ..+....+++   ++|.++...+|+|
T Consensus       190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~---~~K~l~gg~~~ig  266 (401)
T PRK00854        190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL---IGKALSGGFYPVS  266 (401)
T ss_pred             EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE---ecccccCCccCeE
Confidence            9999999999999998    5666667765 999999999987654432211  1111222232   3699874337999


Q ss_pred             ccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEE
Q 014492          294 YGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCE  369 (423)
Q Consensus       294 ~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~  369 (423)
                      ++++++++++.+.....  .++.+++.+.++.++|+..+- +...++++++.+++.+.|++++...+  ..+.|.++.+.
T Consensus       267 ~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~  345 (401)
T PRK00854        267 AVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE-EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVE  345 (401)
T ss_pred             EEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEE
Confidence            99999999887754322  356788999999888864221 23567788888999999987653221  23445555555


Q ss_pred             e-CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          370 V-TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       370 ~-~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      + ++..+..++++.|.++||.+.+..    .+++|+++....+.+++.+++++|
T Consensus       346 ~~~~~~~~~~~~~~L~~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l  395 (401)
T PRK00854        346 LEPEAGGARQYCEALKERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQI  395 (401)
T ss_pred             EecCchhHHHHHHHHHHCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence            5 333457889999999999997643    479999975333335555555554

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.92  E-value=9.7e-23  Score=202.79  Aligned_cols=319  Identities=18%  Similarity=0.167  Sum_probs=211.5

Q ss_pred             CCCCCCeeEcCCCCCC--C-CCCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      ..+++.++|+..+...  + ..+|.+.+++.+ +.....|  +..+..+|+++|+++++. .++|++++|+++++..+++
T Consensus        44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk  122 (423)
T TIGR00713        44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVR  122 (423)
T ss_pred             eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHH
Confidence            3457889999887533  3 356888888876 3222223  555788999999998864 3689999999999999888


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCC---------C---CCCHHHHHHHhhc--CCceEEEEc
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSD---------F---SLNVELIADAVER--EKPKCIFLT  225 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~---------~---~~d~~~l~~~i~~--~~~~~i~l~  225 (423)
                      ...  ...++|+...++|+.+...+..   .+......+....         .   ..|++++++.+.+  .++++|+++
T Consensus       123 ~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e  202 (423)
T TIGR00713       123 LARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE  202 (423)
T ss_pred             HHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence            532  2458999999999876543322   1111111110000         0   1278999998863  467888886


Q ss_pred             -CCCCCcCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccC
Q 014492          226 -SPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       226 -~p~NPtG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                       .|+| +|.+.+.    +++.++|+. |+++|+||+|..+..+... .......+.   +.+|||.++ +|+|+||++++
T Consensus       203 p~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pD---i~t~sK~l~-~G~pig~v~~~  277 (423)
T TIGR00713       203 PVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPD---LTTLGKIIG-GGLPVGAFGGR  277 (423)
T ss_pred             CCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcc---hhhhhhhhc-CCCceeeeeEH
Confidence             7888 7988883    455566665 9999999999887543211 112222222   347999999 99999999999


Q ss_pred             HHHHHHHHHhc-----CCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492          299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV  370 (423)
Q Consensus       299 ~~~~~~l~~~~-----~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~  370 (423)
                      +++++.+....     ..++.+++++.++.++|+   +.++.+..++..+..++.+.+.+++.+........|.++.+.+
T Consensus       278 ~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~  357 (423)
T TIGR00713       278 REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFF  357 (423)
T ss_pred             HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEE
Confidence            99998886321     346789999998888876   3446777777788888888888877765432223444444433


Q ss_pred             CC-C---------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          371 TS-G---------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       371 ~~-~---------~~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      .. .         .+   ...+.+.|.++||.+.+..    .+.+||++...  .+++.+++++
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~~l~~~~t--~~~i~~~~~~  415 (423)
T TIGR00713       358 TEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ----FEACFLSAAHT--EEDIENTIEA  415 (423)
T ss_pred             ecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC----ccceeeECCCC--HHHHHHHHHH
Confidence            21 1         11   2357778889999987643    24689987522  2445554444

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.92  E-value=7e-23  Score=200.52  Aligned_cols=310  Identities=21%  Similarity=0.229  Sum_probs=227.4

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-----CCC--CCCC-Cc----chHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQL-----KFP--YIYP-DP----ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMR  164 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-----~~~--~~Y~-~~----g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~  164 (423)
                      |+|+.+... +.|+.+.+++.+.     ..+  ..+. ..    -..++|+.+++++|.++ ++|++++|++++++.++.
T Consensus         1 iYld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~   79 (371)
T PF00266_consen    1 IYLDNAGTG-PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVAS   79 (371)
T ss_dssp             EEEBTSSS--B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHH
T ss_pred             CEeeCCCcc-CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhh
Confidence            355554333 4567788888662     111  1111 11    24589999999999988 899999999999999999


Q ss_pred             Hh---cCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          165 CV---LDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       165 ~l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .+   +++||+|++.+-.|+...    ..++..|+++..++.+.+..+|++++++.+. ++++++++++.+|-||..+|.
T Consensus        80 ~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~tG~~~pi  158 (371)
T PF00266_consen   80 SLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-PDTRLVSISHVENSTGVRNPI  158 (371)
T ss_dssp             HHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-TTESEEEEESBETTTTBBSSH
T ss_pred             ccccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-cccceEEeecccccccEEeee
Confidence            99   789999999999997444    4455689999999976777899999999997 899999999999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-----
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-----  311 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-----  311 (423)
                      +++.++|+. |+++++|.+++.....    ..+...+-++++.|..|.+|.+|  +|+++.+++.++++......     
T Consensus       159 ~~I~~~~~~~~~~~~vD~~~~~g~~~----id~~~~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~~  232 (371)
T PF00266_consen  159 EEIAKLAHEYGALLVVDAAQSAGCVP----IDLDELGADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYLD  232 (371)
T ss_dssp             HHHHHHHHHTTSEEEEE-TTTTTTSS------TTTTTESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTTT
T ss_pred             ceehhhhhccCCceeEechhcccccc----ccccccccceeeecccccCCCCc--hhhheehhhhhhccccccccccccc
Confidence            999999987 9999999999844321    11233455589999999444445  79999999988888432211     


Q ss_pred             ------------------CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-----CCceEE
Q 014492          312 ------------------YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-----SYSNFI  366 (423)
Q Consensus       312 ------------------~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~~~  366 (423)
                                        .+.+.....++..+++.  ...+++..++..++.+++.+.|++++.+.+..     ..+..+
T Consensus       233 ~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~  312 (371)
T PF00266_consen  233 FPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIV  312 (371)
T ss_dssp             HHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEE
T ss_pred             cccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceE
Confidence                              14556666666666654  23467788899999999999999998776522     234556


Q ss_pred             EEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--------CCCeEEEEecChhhHHHHH
Q 014492          367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--------LKGYVRVSVGKPEHTDALM  416 (423)
Q Consensus       367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~--------~~~~iRis~~~~~~~~~l~  416 (423)
                      .+.++ +.+..++.+.|.++||.++.|....        ..++||+|+....+.++++
T Consensus       313 ~~~~~-~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~  369 (371)
T PF00266_consen  313 SFNLP-GSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVD  369 (371)
T ss_dssp             EEEET-TSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHH
T ss_pred             EEeec-CCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHh
Confidence            66775 7889999999997899999865422        3489999987544444444

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.92  E-value=1.3e-22  Score=200.60  Aligned_cols=321  Identities=13%  Similarity=0.103  Sum_probs=208.0

Q ss_pred             CCCCCeeEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+++.++|+..+.....   .+|++.+++.+. . ..+.   +......++++.++++.+.  +.+++++++++++..++
T Consensus        28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e~al  105 (400)
T PTZ00125         28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGETAL  105 (400)
T ss_pred             CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHH
Confidence            35677899987744432   478899888763 2 1111   1223456788888888774  57889999999999999


Q ss_pred             HHhcC----------CCCeEEEcCCCchhhHHHH-HHCCCeEE---EecCCCC----CCCCHHHHHHHhhcCCceEEEEc
Q 014492          164 RCVLD----------PGDKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSD----FSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       164 ~~l~~----------~gd~Vl~~~p~y~~~~~~~-~~~g~~~~---~v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      +....          .+++|+..+-.|+...... ...+....   ..+...+    ...|++++++.+...++++|+++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e  185 (400)
T PTZ00125        106 KFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE  185 (400)
T ss_pred             HHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence            86631          3467888888886543322 22221111   0010000    12389999999864679999999


Q ss_pred             CCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhh--hccCCcEEEEccChhhhcccCccccccccC
Q 014492          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       226 ~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                      +++||||.+++    .+++.++|+. |+++|+||+|..+...+.....  ....+.++   ++||.++.+++|+||++++
T Consensus       186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~---~~sK~l~~g~~~ig~v~~~  262 (400)
T PTZ00125        186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV---LLGKALSGGLYPISAVLAN  262 (400)
T ss_pred             CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE---EEcccccCCCcCcEEEEEc
Confidence            99999999998    6677777776 9999999999876543322111  11122222   4689998444599999999


Q ss_pred             HHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCC
Q 014492          299 LSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS  372 (423)
Q Consensus       299 ~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~  372 (423)
                      +++++.+....  ..++.+++.+.++.++|+..+. +...++.+++.+++.+.|++    .+.+....+.|.++++.++.
T Consensus       263 ~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~  341 (400)
T PTZ00125        263 DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE-EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDH  341 (400)
T ss_pred             HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEcc
Confidence            99998876433  2366788888888777643110 12334444455555555544    34433234567888888863


Q ss_pred             --CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 --GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 --~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                        +.+..++.+.|.++||.+.++.    .+++||++....+.+++.+++++|
T Consensus       342 ~~~~~~~~~~~~l~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l  389 (400)
T PTZ00125        342 SDGVNAWDLCLKLKENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEII  389 (400)
T ss_pred             CcchHHHHHHHHHHHCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHH
Confidence              3467789999999999998754    579999975322335565555554

>PRK05968 hypothetical protein; Provisional

Probab=99.92  E-value=6.3e-23  Score=201.02  Aligned_cols=277  Identities=20%  Similarity=0.180  Sum_probs=203.1

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~  200 (423)
                      +|+++...+|++++++++|.+ ..++++ +++.++..++.+++++||+|+++.+.|..    +...++..|++++.++. 
T Consensus        59 r~~~p~~~~le~~lA~l~g~~-~av~~~-sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-  135 (389)
T PRK05968         59 RGDNPTVRAFEEMLAKLEGAE-DARGFA-SGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG-  135 (389)
T ss_pred             CCCChhHHHHHHHHHHHhCCC-cEEEEC-CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-
Confidence            456667889999999999974 345554 55579998888899999999999999974    34556678999999873 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          .|++++++.+  .++|+|++++|.||++.+.+.+++.++++. |+++|+|++|..+.... ..    ..+..+++.
T Consensus       136 ----~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~-p~----~~g~Divv~  204 (389)
T PRK05968        136 ----RDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR-PI----TLGVDLVIH  204 (389)
T ss_pred             ----CCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC-ch----hcCCcEEEe
Confidence                2789999988  368999999999999999999999999987 99999999998654322 11    123358889


Q ss_pred             cChhhhcccC-ccccccccCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |++|.++.+| .+.|+++.++++++++++...+   ..+++..+..+...|+.   +..+.++..++.+++.+.|++++.
T Consensus       205 S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t---l~~r~~~~~~~a~~la~~L~~~p~  281 (389)
T PRK05968        205 SASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT---LPLRMKAHEASALEIARRLKAHPV  281 (389)
T ss_pred             eccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc---HHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999988655 5789999999988887754332   35666666666555543   456666667778889999998876


Q ss_pred             Ce-e-cC-----------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC----------------------C-CC
Q 014492          356 LN-P-YP-----------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK----------------------E-LK  399 (423)
Q Consensus       356 ~~-~-~p-----------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~----------------------~-~~  399 (423)
                      +. + +|           +.+..+.+++.++.+..+|++.|...++.++-|+..                      + .+
T Consensus       282 v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~  361 (389)
T PRK05968        282 VERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSP  361 (389)
T ss_pred             ccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCC
Confidence            64 3 34           234577788865556778888887666555433221                      1 15


Q ss_pred             CeEEEEecChhhHHHHHHHH
Q 014492          400 GYVRVSVGKPEHTDALMECL  419 (423)
Q Consensus       400 ~~iRis~~~~~~~~~l~~al  419 (423)
                      +.||+|++.++ .++|.+-+
T Consensus       362 ~liR~SvGlE~-~~dl~~dl  380 (389)
T PRK05968        362 RSVRLHVGLEG-TEALWADL  380 (389)
T ss_pred             CeEEEEeccCC-HHHHHHHH
Confidence            78999999765 35554433

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.92  E-value=6.8e-23  Score=200.70  Aligned_cols=280  Identities=18%  Similarity=0.143  Sum_probs=194.1

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-H---HHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-A---AVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~---~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++++++++|.+. .+++ +++++++..++.+++++||+|+++.|+|...... .   +..|+++..++.
T Consensus        56 ~r~~~p~~~~Le~~lA~~~g~~~-~i~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~  133 (388)
T PRK07811         56 ARTGNPTRTALEEQLAALEGGAY-GRAF-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL  133 (388)
T ss_pred             cCCCCccHHHHHHHHHHHhCCCc-eEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence            35677888999999999999754 4445 4557999999999999999999999999843322 2   235888887763


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           .|++++++.+. +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|....... +..    .+..+++
T Consensus       134 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-p~~----~gaDivv  202 (388)
T PRK07811        134 -----SDLDAVRAAIT-PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ-PLA----LGADVVV  202 (388)
T ss_pred             -----CCHHHHHHhcC-cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC-chh----hCCcEEE
Confidence                 48999999997 689999999999999999999999999987 99999999998654321 111    2335999


Q ss_pred             ccChhhhcccC-ccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|++|.++.+| .+.||++++ +++.+++...+..  ...++..+..+...|+   .+..+.++..++...+.+.|++.+
T Consensus       203 ~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~---tl~~R~~~~~~na~~la~~L~~~p  279 (388)
T PRK07811        203 HSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK---TLAVRMDRHSENAEAVAEFLAGHP  279 (388)
T ss_pred             ecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999988654 467998874 6666666654433  2345555444444444   355666667788899999998876


Q ss_pred             CCe--ecCC----------------CceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC--------------------
Q 014492          355 FLN--PYPS----------------YSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN--------------------  395 (423)
Q Consensus       355 ~~~--~~p~----------------~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~--------------------  395 (423)
                      .+.  .+|.                .|..+.+++.++ .....|.+.|.=-.+.+.-|+.                    
T Consensus       280 ~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~  359 (388)
T PRK07811        280 EVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQL  359 (388)
T ss_pred             CeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCcccCCHhhc
Confidence            543  2332                355677888532 2234455554311112211110                    


Q ss_pred             CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          396 KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       396 ~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      .-.++.||||++.++ .++|.+-|+
T Consensus       360 gi~~~liR~svGlE~-~~dl~~dl~  383 (388)
T PRK07811        360 EVPDDLVRLSVGIED-VADLLADLE  383 (388)
T ss_pred             CCCCCEEEEEeCCCC-HHHHHHHHH
Confidence            011468999999875 466655544

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=9.4e-23  Score=199.87  Aligned_cols=278  Identities=15%  Similarity=0.210  Sum_probs=194.6

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh-h---HHHHHHCCCeEEEecCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-Y---EFDAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~---~~~~~~~g~~~~~v~~~~~  202 (423)
                      .++...+|++++++++|.+ +.+++++|. .++..++. ++++||+|+++.|.|+. +   ...++..|++++.++.+  
T Consensus        52 ~~p~~~~le~~lA~l~g~~-~~v~~~sG~-~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--  126 (390)
T PRK08064         52 GNPTREALEDIIAELEGGT-KGFAFASGM-AAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT--  126 (390)
T ss_pred             CChhHHHHHHHHHHHhCCC-CeEEECCHH-HHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC--
Confidence            4566789999999999976 567776665 57888886 78999999999999963 2   34456689999999852  


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                         |++++++.++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|..+.... ..    ..+.++++.|+
T Consensus       127 ---d~~~l~~~l~-~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-~~----~~g~Divv~S~  197 (390)
T PRK08064        127 ---NLEEVAQNIK-PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-PL----DLGADVVLHSA  197 (390)
T ss_pred             ---CHHHHHHhcC-CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-ch----hhCCcEEEeec
Confidence               6899999996 689999999999999999999999999997 99999999998654321 11    23456899999


Q ss_pred             hhhhcc-cCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e
Q 014492          282 SKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P  358 (423)
Q Consensus       282 SK~~g~-~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~  358 (423)
                      +|.++. .|...|+++. ++++++++......++.....+.+.. ++...+.+..+.++..++...+.+.|++.+.+. +
T Consensus       198 tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v  276 (390)
T PRK08064        198 TKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNV  276 (390)
T ss_pred             ceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceE
Confidence            998752 2344576655 56888888887776655433333332 334444466777777888889999998765432 1


Q ss_pred             -cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCc---EEEeCC------------C----------C
Q 014492          359 -YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGV---MIRHYN------------N----------K  396 (423)
Q Consensus       359 -~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI---~v~~~~------------~----------~  396 (423)
                       +|                +.|..+.+++. +  .+++...+...++   .++-|+            +          .
T Consensus       277 ~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~-~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~  353 (390)
T PRK08064        277 YYPGLQTHLGFDIQQSQATSAGAVLSFTLQ-S--EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDER  353 (390)
T ss_pred             ECCCCCCCccHHHHHHhCCCcceEEEEEEC-C--HHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhc
Confidence             11                23456777885 2  3344444445565   333331            1          1


Q ss_pred             CC-CCeEEEEecCh---hhHHHHHHHHhhh
Q 014492          397 EL-KGYVRVSVGKP---EHTDALMECLMHL  422 (423)
Q Consensus       397 ~~-~~~iRis~~~~---~~~~~l~~al~~l  422 (423)
                      +. ++.||+|++.+   +..++|.+||+++
T Consensus       354 gi~~~liR~SvGle~~~dli~dl~~Al~~~  383 (390)
T PRK08064        354 GITDGLLRLSVGLENVDDLIADFEQALSYV  383 (390)
T ss_pred             CCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence            12 57899999854   3445556666543

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.91  E-value=8.7e-23  Score=200.08  Aligned_cols=280  Identities=16%  Similarity=0.114  Sum_probs=199.8

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|+++++++.|.  +++++++|+++++..++.+++++||+|+++.|+|..+..    .++..|++++.++.
T Consensus        60 ~r~~~pt~~~Le~~lA~l~g~--~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~  137 (394)
T PRK07050         60 GLHATPTSLALAQRLAEIEGG--RHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP  137 (394)
T ss_pred             CCCCCHHHHHHHHHHHHHhCC--CeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence            457888889999999999994  589999999999999999999999999999999986553    45668999999874


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                      .     +.+++++.++ +++|+|++++|+||+|.+.+.+++.++|+. |+++|+|++|...... ..   . ..+..+++
T Consensus       138 ~-----~~~~l~~~i~-~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-~~---l-~~GaDi~v  206 (394)
T PRK07050        138 L-----IGAGIADLIQ-PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-KP---F-EHGVDISV  206 (394)
T ss_pred             C-----CHHHHHHhcC-CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-CH---H-HcCCeEEE
Confidence            2     4578888886 689999999999999999999999999987 9999999999754321 11   1 22446999


Q ss_pred             ccChhhhcc-cCcccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~-~G~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|++|.++. .+.+.|+++. ++++.++++..+..  .++++.....+...++   .+..+.++..++..++.+.|++.+
T Consensus       207 ~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~---tl~~Rl~~~~~~a~~la~~L~~~p  283 (394)
T PRK07050        207 QALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP---SLQVRLAAHDRSALEVAEWLKARP  283 (394)
T ss_pred             EECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998752 3355787776 67888877765543  3455555444443333   344566666777778888888765


Q ss_pred             CCe-e-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC-----------------C
Q 014492          355 FLN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN-----------------K  396 (423)
Q Consensus       355 ~~~-~-~p----------------~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~-----------------~  396 (423)
                      .+. + +|                ..+..+.+.+..+   .+.++|.+.|...++.+.-|+.                 .
T Consensus       284 ~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~  363 (394)
T PRK07050        284 EIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWP  363 (394)
T ss_pred             CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcC
Confidence            443 2 12                1233455666532   3456677777655655543322                 1


Q ss_pred             CCCCeEEEEecChhhHHHHHHHHh
Q 014492          397 ELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       397 ~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      ..++.||||++.++ .++|.+-|+
T Consensus       364 ~~~~~iR~svGlE~-~~dl~~dl~  386 (394)
T PRK07050        364 HRGTLVRLYIGLED-EADLIADLE  386 (394)
T ss_pred             CCCCEEEEEeCcCC-HHHHHHHHH
Confidence            12368999999765 355554443

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.91  E-value=1.1e-22  Score=186.68  Aligned_cols=287  Identities=16%  Similarity=0.243  Sum_probs=214.7

Q ss_pred             CCCCC-cchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHHHHHHCCCeEE
Q 014492          124 YIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV  195 (423)
Q Consensus       124 ~~Y~~-~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  195 (423)
                      ..|.+ .|.+-+|+.+|++.    |  .+|++|++|.|++.++..++..++ ++.+.|+++-|.|+.|......+|+..+
T Consensus       107 GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v  186 (475)
T KOG0258|consen  107 GAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQV  186 (475)
T ss_pred             cccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCccc
Confidence            34754 47889999999997    4  467899999999999999999876 4678999999999999999999999888


Q ss_pred             EecC--CCCCCCCHHHHHHHhhc----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-
Q 014492          196 KVPR--KSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-  264 (423)
Q Consensus       196 ~v~~--~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-  264 (423)
                      .+-+  +.+|.+|.++|++.+.+    -+++++++.||.||||.+++.+-+++|+++    +++|+.||+|.+-.+... 
T Consensus       187 ~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~s  266 (475)
T KOG0258|consen  187 PYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGS  266 (475)
T ss_pred             ceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCc
Confidence            7775  46899999999988754    368999999999999999999999999875    999999999998665432 


Q ss_pred             hhhh-------hc-cC---CcEEEEccChhhh-cccCcccccccc---CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhCC
Q 014492          265 RMEW-------VK-KH---DNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAACAALQN  328 (423)
Q Consensus       265 ~~~~-------~~-~~---~~~i~i~S~SK~~-g~~G~R~G~i~~---~~~~~~~l~~~~~~-~~~~~~~~~a~~~~l~~  328 (423)
                      ...+       .. .+   -.++.++|.||.+ |=.|.|-||+-.   ++++.+.+.+.... ...+...|...-..++.
T Consensus       267 kFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnP  346 (475)
T KOG0258|consen  267 KFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNP  346 (475)
T ss_pred             chHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCC
Confidence            1111       11 12   2356788889985 446899999765   66766666655432 44555566655555543


Q ss_pred             h--------HH---HHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEe--C---------CCCCHHHHH-HHHH
Q 014492          329 P--------IY---LEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEV--T---------SGMDAKKLK-DDLA  384 (423)
Q Consensus       329 ~--------~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~--~---------~~~~~~~l~-~~L~  384 (423)
                      +        .+   .+...+.++++...+.+.++.+.++.+. +.+++|++.++  |         .+...++|+ ..|+
T Consensus       347 P~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LL  426 (475)
T KOG0258|consen  347 PKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLL  426 (475)
T ss_pred             CCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHH
Confidence            1        12   3345667777888888999999888864 56778888544  4         134455654 4555


Q ss_pred             -hCCcEEEeCCCCC---CCCeEEEEecChh
Q 014492          385 -KMGVMIRHYNNKE---LKGYVRVSVGKPE  410 (423)
Q Consensus       385 -~~gI~v~~~~~~~---~~~~iRis~~~~~  410 (423)
                       ..||.+.||+.++   +.-++|.++-...
T Consensus       427 e~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~  456 (475)
T KOG0258|consen  427 EATGICVVPGSGFGQKEGTYHFRTTILPPG  456 (475)
T ss_pred             HhcCeEEecCCCCCCCCceeEEEEeecCch
Confidence             7899999998853   3448999987654

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=4.3e-22  Score=194.61  Aligned_cols=217  Identities=19%  Similarity=0.188  Sum_probs=164.6

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRK  200 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~  200 (423)
                      .+|+++...+|++.+++++|.  +++++++|+++++..++.+++++||+|+++.|.|..+...+   +..|++++.+.  
T Consensus        48 ~r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~--  123 (385)
T PRK08574         48 SREENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY--  123 (385)
T ss_pred             ECCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence            345777889999999999995  46778888899999999999999999999999998766555   44688777653  


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          +|++++++.+.+.++|+|++++|+||||.+++.+++.++|+. |+++|+|++|...... ...    ..+..+++.
T Consensus       124 ----~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~l----~~GaDivv~  194 (385)
T PRK08574        124 ----PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY-RPL----RHGADFVVH  194 (385)
T ss_pred             ----CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCcEEEe
Confidence                368999999974389999999999999999999999999987 9999999999643221 111    234569999


Q ss_pred             cChhhhcccCccc-ccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G~R~-G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |++|.++.+|-.+ |+++. ++++.++++..+..  ..+++.....+...++   .+..+.++..++..++.+.|++.+.
T Consensus       195 S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~---tL~~R~~~~~~na~~la~~L~~~p~  271 (385)
T PRK08574        195 SLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK---TLEVRFERQCRNAMAIAEFLSEHPK  271 (385)
T ss_pred             eCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC---cHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            9999987666554 64554 77888877655443  3455555444444443   3556666677788889999987764


Q ss_pred             C
Q 014492          356 L  356 (423)
Q Consensus       356 ~  356 (423)
                      +
T Consensus       272 v  272 (385)
T PRK08574        272 V  272 (385)
T ss_pred             c
Confidence            4

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.91  E-value=3.2e-22  Score=197.84  Aligned_cols=163  Identities=18%  Similarity=0.202  Sum_probs=136.8

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++.+++++|.  +..++++++++++..++.+++++||+|+++.+.|+.    +...++..|++++.++.
T Consensus        52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~  129 (418)
T TIGR01326        52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP  129 (418)
T ss_pred             ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence            456778788999999999995  467788888899999998899999999999999853    34456678999999984


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                      +     |++++++.+. +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|...... ..   + ..+.++++
T Consensus       130 ~-----d~~~l~~~l~-~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~~---l-~~g~Divv  198 (418)
T TIGR01326       130 D-----DPEEFEKAID-ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-RP---I-DHGADIVV  198 (418)
T ss_pred             C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-Cc---h-hcCCeEEE
Confidence            2     7999999997 689999999999999999999999999987 9999999999743211 11   1 24568999


Q ss_pred             ccChhhhcccCccccccccCH
Q 014492          279 RTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       279 ~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      .|+||.++.+|+|+||+++++
T Consensus       199 ~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       199 HSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             ECccccccCCccceEEEEEec
Confidence            999999998999999988854

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.90  E-value=2.5e-21  Score=189.22  Aligned_cols=309  Identities=13%  Similarity=0.053  Sum_probs=200.0

Q ss_pred             CCeeEcCCC-CCCCCCCHHHHHHHh----cCC-C-----CCCCC------Cc-chHHHHHHHHHHhCCCCCcEEEeCCHH
Q 014492           95 EDIVKIDAN-ENPYGPPPEVREALG----QLK-F-----PYIYP------DP-ESRRLRAALAKDSGLESDHILVGCGAD  156 (423)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~----~~~-~-----~~~Y~------~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~  156 (423)
                      .++++|.+| +-++..+|.+.+++.    +.. .     .+..+      .. -..++|+.+|+++|.+ +.+++++|+.
T Consensus         4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~sG~~   82 (370)
T PRK05937          4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPSGYM   82 (370)
T ss_pred             CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECChHH
Confidence            456888776 445566666655444    321 0     11111      11 2568999999999974 4578888886


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCc
Q 014492          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD  231 (423)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt  231 (423)
                      ..+ .+...+.++||.|++..-.|......++......+.++     ..|++++++.+++     .++.+|++++++|++
T Consensus        83 a~~-~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~  156 (370)
T PRK05937         83 ANL-GLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFK  156 (370)
T ss_pred             HHH-HHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCC
Confidence            544 45555667888888878788766666665544444443     4588999998863     235577788999999


Q ss_pred             CcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhh---hhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492          232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (423)
Q Consensus       232 G~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~  307 (423)
                      |.+.|.+++.++++. |+++++||+|.....+.....   .....+..+++.||||.+|..|.   .++..++..+.+..
T Consensus       157 G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~---~vl~~~~~~~~~~~  233 (370)
T PRK05937        157 GTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA---ALLSSSEVKQDLML  233 (370)
T ss_pred             CCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCce---EEEcCHHHHHHHHH
Confidence            999999999999997 999999999986443222111   11112223678999999997773   34555666555553


Q ss_pred             hcCC----CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHH
Q 014492          308 AKQP----YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD  382 (423)
Q Consensus       308 ~~~~----~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~  382 (423)
                      ...+    .+.+++...++.++++.. +..+..+++++++++++.+.|+..+.       +....+.++ +.+..++.+.
T Consensus       234 ~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~-------~~~~~i~~~-~~~~~~~~~~  305 (370)
T PRK05937        234 NSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAP-------GCVQPIFLP-GISEQELYSK  305 (370)
T ss_pred             hCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCC-------CCEEEEEeC-ChhHHHHHHH
Confidence            3222    345666665555555321 11234567788888888888764321       112224444 3456788889


Q ss_pred             HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          383 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       383 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      |.++||.+..... ...+++||+++   +.+|++++.++|+++
T Consensus       306 L~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~  347 (370)
T PRK05937        306 LVETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATY  347 (370)
T ss_pred             HHHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            9999999875432 23568999994   777788888877653

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.90  E-value=7.1e-22  Score=196.32  Aligned_cols=327  Identities=12%  Similarity=0.083  Sum_probs=206.8

Q ss_pred             CCCCCCeeEcCCCCCC--CC-CCHHHHHHHhcC-C-CCCCC-C---CcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANENP--YG-PPPEVREALGQL-K-FPYIY-P---DPESRRLRAALAKDSGLES-DHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~~-~-~~~~Y-~---~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~  160 (423)
                      ..+++.++|+..+...  ++ .+|++.+++.+. . ..+.+ +   .+...++-+.+++..+.+. +.++++++++++++
T Consensus        37 d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e  116 (425)
T PRK08088         37 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVE  116 (425)
T ss_pred             eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            3457788999876433  33 368888877662 2 11111 2   2233456666666655433 46777777777777


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeE----------------EEecCCCCCCCC----HHHHHHHhh---
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAV----------------VKVPRKSDFSLN----VELIADAVE---  215 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~----------------~~v~~~~~~~~d----~~~l~~~i~---  215 (423)
                      .+++...  .....|+...++|++....+...+...                +.+|.+.+ ..+    ++.+++.+.   
T Consensus       117 ~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~  195 (425)
T PRK08088        117 NAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA  195 (425)
T ss_pred             HHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc
Confidence            6666432  223557777999986665544433221                11221111 122    556787775   


Q ss_pred             -cCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC
Q 014492          216 -REKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG  289 (423)
Q Consensus       216 -~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G  289 (423)
                       ..++.+|++. ..+++.+...+.+.+++|.+.    |+++|+||+|.++...+... .....+.+..+.||||.++ +|
T Consensus       196 ~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~~~pdi~s~sK~l~-~G  273 (425)
T PRK08088        196 APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMGVAADLTTFAKSIA-GG  273 (425)
T ss_pred             CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcCCCCCEEEEecccc-CC
Confidence             2567788887 446665556677666666553    99999999999875443321 2222333455789999998 99


Q ss_pred             ccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce
Q 014492          290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN  364 (423)
Q Consensus       290 ~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~  364 (423)
                      +|+||+++++++++.+.....  .++.+++.|.++..+|+..   ++++..++..++.++.+.+.+++.+.+....+.|.
T Consensus       274 ~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~  353 (425)
T PRK08088        274 FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGA  353 (425)
T ss_pred             CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccce
Confidence            999999999999988765443  3677899999999998753   34555555555555555555555654332334489


Q ss_pred             EEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          365 FILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++|+.+.+.        .....+.+.+.++||.+.++..+  .+.+||+++...+.+++.+++++|
T Consensus       354 ~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l  417 (425)
T PRK08088        354 MIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEII  417 (425)
T ss_pred             EEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence            999998422        23677888888999998865432  478999998433346676666654

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.90  E-value=2.4e-21  Score=188.23  Aligned_cols=251  Identities=18%  Similarity=0.191  Sum_probs=184.4

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS  204 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~  204 (423)
                      ..+...++++++++++|.  +++++++|+++++..++..+ +++||+|+++.++|..+...+...|++++.++.+. ++.
T Consensus        16 ~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   93 (352)
T cd00616          16 LGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYN   93 (352)
T ss_pred             CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCC
Confidence            445678999999999995  46778888999999999988 58999999999999999888899999999999765 788


Q ss_pred             CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccCh
Q 014492          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFS  282 (423)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~S  282 (423)
                      +|++++++.++ +++++|+++|   ++|.+.+.+++.++|+. |+++|+|++|..... .....   +.. ..+.+.|++
T Consensus        94 ~d~~~l~~~i~-~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~---~~~-~d~~~~S~~  165 (352)
T cd00616          94 IDPELIEAAIT-PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKV---GTF-GDAGAFSFH  165 (352)
T ss_pred             cCHHHHHHhcC-cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEc---ccC-cceeEEcCC
Confidence            99999999996 6899999764   69999999999999987 999999999985432 11111   111 135666765


Q ss_pred             --hhhcccCccccccccC-HHHHHHHHHhcCC-----------------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 014492          283 --KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------YNVSVAAEVAACAALQNPIYLEKVKEALIKE  342 (423)
Q Consensus       283 --K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-----------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  342 (423)
                        |.++  +.+.|+++.+ +++.+++......                 +.++.+....+...   .+.+++..++.+++
T Consensus       166 ~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~---l~~~~~~~~~~~~~  240 (352)
T cd00616         166 PTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQ---LEKLDEIIARRREI  240 (352)
T ss_pred             CCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHH---HHhhHHHHHHHHHH
Confidence              8763  3346777775 5777766543211                 11233333322222   23456777788889


Q ss_pred             HHHHHHHHccCCCCeecC-CC-----ceEEEEEeCC--CCCHHHHHHHHHhCCcEEEe
Q 014492          343 RERLFKLLKDVPFLNPYP-SY-----SNFILCEVTS--GMDAKKLKDDLAKMGVMIRH  392 (423)
Q Consensus       343 ~~~l~~~L~~~~~~~~~p-~~-----~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~  392 (423)
                      .+++.+.|.+++++.+.. ..     ...+.+.+++  +.+.+++.+.|.++||.+..
T Consensus       241 ~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~  298 (352)
T cd00616         241 AERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV  298 (352)
T ss_pred             HHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee
Confidence            999999999876665432 11     2344566664  67899999999999997763

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.90  E-value=1.5e-21  Score=190.54  Aligned_cols=275  Identities=20%  Similarity=0.207  Sum_probs=195.4

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~  202 (423)
                      +++...+|++.+++++|.  ++++++++++.++..++. ++++||+|+++.+.|..+..    .++..|++++.++.   
T Consensus        45 ~~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~---  118 (378)
T TIGR01329        45 GNPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT---  118 (378)
T ss_pred             CChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC---
Confidence            455578999999999996  455666666779988887 78999999999999986544    34568999999985   


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                        .|+++++++++ +++|+|++++|+||||.+.+.+++.++|+. |+++|+|++|..... .....    .+..+++.|+
T Consensus       119 --~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-~~~l~----~g~Di~v~S~  190 (378)
T TIGR01329       119 --TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-CNPLE----LGADIVYHSA  190 (378)
T ss_pred             --CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-CChhh----cCCcEEEEec
Confidence              27899999997 789999999999999999999999999987 999999999853322 11121    2345999999


Q ss_pred             hhhhccc-Ccccccccc-CHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          282 SKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       282 SK~~g~~-G~R~G~i~~-~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      +|.++.+ +.+.|++++ ++++.+++.....  ...+++.....+   +...+.+..+.++..++...+.+.|++.+.+.
T Consensus       191 tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~---~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~  267 (378)
T TIGR01329       191 TKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLL---LRGIKTLAIRIEKQQENARAIAMFLSTHPRVK  267 (378)
T ss_pred             ceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHH---HccCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            9987533 477899987 4556576765544  234555544332   33334466667777788888888887765332


Q ss_pred             --ecC----------------CCceEEEEEeCCCCC-HHHHHHHHHhCCcEEEeCCC------C----------------
Q 014492          358 --PYP----------------SYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNN------K----------------  396 (423)
Q Consensus       358 --~~p----------------~~~~~~~~~~~~~~~-~~~l~~~L~~~gI~v~~~~~------~----------------  396 (423)
                        .+|                ..+..+.+.+ ++.. +.+|++.|...++.++-|+.      +                
T Consensus       268 ~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~  346 (378)
T TIGR01329       268 KVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREER  346 (378)
T ss_pred             EEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhc
Confidence              121                1345667777 3444 67888888766777764432      0                


Q ss_pred             -CCCCeEEEEecChhhHHHHHHHHh
Q 014492          397 -ELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       397 -~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                       -.++.||||++.++ .++|.+-++
T Consensus       347 gi~~~liR~svGlE~-~~dl~~dl~  370 (378)
T TIGR01329       347 GLPEDLVRLSVGIED-VDDLISDLD  370 (378)
T ss_pred             CCCCCeEEEEeccCC-HHHHHHHHH
Confidence             11468999999765 355554443

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=1.4e-21  Score=193.04  Aligned_cols=244  Identities=18%  Similarity=0.185  Sum_probs=175.5

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~  200 (423)
                      +++++....|++.++++.|.  +..++++|+++++..++..++++||+|+++.+.|+.    +...++..|++++.++. 
T Consensus        60 r~~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-  136 (431)
T PRK08248         60 RIMNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-  136 (431)
T ss_pred             CCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence            34666778999999999994  467788888899999998899999999999998863    33456678999999984 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          .|+++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++|..... ..+   + ..+.++++.
T Consensus       137 ----~d~e~l~~ai~-~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-~~p---l-~~gaDivv~  206 (431)
T PRK08248        137 ----SDPENFEAAIT-DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-LRP---I-EHGADIVVH  206 (431)
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-CCh---h-HcCCCEEEE
Confidence                37899999997 689999999999999999999999999987 999999999873211 111   1 356679999


Q ss_pred             cChhhhcccCccccccccC-HHHH-----------------------H----------HHH--HhcCCCCCcHHHHHHHH
Q 014492          280 TFSKRAGLAGLRVGYGAFP-LSII-----------------------E----------YLW--RAKQPYNVSVAAEVAAC  323 (423)
Q Consensus       280 S~SK~~g~~G~R~G~i~~~-~~~~-----------------------~----------~l~--~~~~~~~~~~~~~~a~~  323 (423)
                      |++|.+|.+|.++|++++. .+..                       +          ...  .......+++.....  
T Consensus       207 S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l--  284 (431)
T PRK08248        207 SATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFL--  284 (431)
T ss_pred             cCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHH--
Confidence            9999999999999887763 2110                       0          000  001112344444333  


Q ss_pred             HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC-----------------CCceEEEEEeCCC-CCHHHHHHHH
Q 014492          324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP-----------------SYSNFILCEVTSG-MDAKKLKDDL  383 (423)
Q Consensus       324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L  383 (423)
                       +++..+.+..+.++..++..++.+.|++.+.+. + +|                 ..|..+.+++.++ .....|++.|
T Consensus       285 -~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l  363 (431)
T PRK08248        285 -LLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSV  363 (431)
T ss_pred             -HhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhC
Confidence             333334466777778889999999999877553 1 22                 1245677787533 2234555555


Q ss_pred             H
Q 014492          384 A  384 (423)
Q Consensus       384 ~  384 (423)
                      .
T Consensus       364 ~  364 (431)
T PRK08248        364 K  364 (431)
T ss_pred             C
Confidence            4

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=3.6e-21  Score=187.31  Aligned_cols=236  Identities=16%  Similarity=0.077  Sum_probs=175.8

Q ss_pred             CCCCCCHHHHHHHhcC-CCCCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492          105 NPYGPPPEVREALGQL-KFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~-~~~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (423)
                      ..+..++++.++.... ...+.|   .++....||++++++.+.  +++++++|+++++..++.+++++||+|++++|.|
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y  110 (394)
T PRK09028         33 VVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFLKAGDHLLMVDSCY  110 (394)
T ss_pred             cccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence            3455556666655432 122345   345567999999999864  4789999999999999999999999999999999


Q ss_pred             hhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492          181 TMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       181 ~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea  255 (423)
                      ..+...    .+..|+++..++..     |.+.+++.+. +++|+|++++|+||||.+.+++++.++|+. |+++|+|++
T Consensus       111 ~~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~-~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t  184 (394)
T PRK09028        111 EPTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNT  184 (394)
T ss_pred             HHHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence            766543    34578888877632     4578888886 689999999999999999999999999987 999999999


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhhccc-CccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHH
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL  332 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~  332 (423)
                      |...... .+.    ..+-++++.|.+|.++-. ....|+++.++++.+.+......  ..+++.....+...|   +.+
T Consensus       185 ~a~p~~~-~Pl----~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl---~TL  256 (394)
T PRK09028        185 WASPINS-RPF----EMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGL---RTL  256 (394)
T ss_pred             ccccccC-Ccc----ccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHccc---CcH
Confidence            9843211 111    345679999999987433 35678887788777766644332  345666655554444   346


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCCC
Q 014492          333 EKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       333 ~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                      ..+.++..++...+.+.|++.+.+
T Consensus       257 ~lR~~~~~~na~~la~~L~~~p~v  280 (394)
T PRK09028        257 GVRLAQHEKNALKVANWLATRPEV  280 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCc
Confidence            777788889999999999987755

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.90  E-value=2e-21  Score=188.32  Aligned_cols=280  Identities=17%  Similarity=0.160  Sum_probs=194.8

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCe-EEEecCCCC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKSD  202 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~~  202 (423)
                      .+|+++...+|+++++++.|  .+++++++|+++++.+++. ++++||+|+++.+.|............+ -+.+    .
T Consensus        49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----~  121 (364)
T PRK07269         49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----T  121 (364)
T ss_pred             eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----E
Confidence            56788889999999999998  4689999999999999995 6799999999999997443332221000 1111    2


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      +..|+++++++++ +++|+|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+.    .....+++.|+
T Consensus       122 ~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl----~~gaDivv~S~  195 (364)
T PRK07269        122 YANTEEELIAAIE-EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPI----ELGADIVLHSA  195 (364)
T ss_pred             ecCCHHHHHHhcC-cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCcEEEecC
Confidence            3468999999997 689999999999999999999999999987 9999999997633221 222    23345999999


Q ss_pred             hhhhcccCc-ccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          282 SKRAGLAGL-RVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       282 SK~~g~~G~-R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      +|.++..|- =.|++++ ++++.++++.....  ..+++.....+...|+.   +..+.++.+++..++.+.|++.+.+.
T Consensus       196 tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t---L~~r~~~~~~na~~~a~~L~~~p~v~  272 (364)
T PRK07269        196 TKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT---LSLRMERSTANAQEVVAFLKKSPAVK  272 (364)
T ss_pred             ceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            998864332 2477777 56777777644422  35677766666666644   67777778899999999999887653


Q ss_pred             --ecCCCceEEEEEeCCCCCHHHHHHHHHhC----------CcEEEeCCC-------------CCCCCeEEEEecChhhH
Q 014492          358 --PYPSYSNFILCEVTSGMDAKKLKDDLAKM----------GVMIRHYNN-------------KELKGYVRVSVGKPEHT  412 (423)
Q Consensus       358 --~~p~~~~~~~~~~~~~~~~~~l~~~L~~~----------gI~v~~~~~-------------~~~~~~iRis~~~~~~~  412 (423)
                        .+|+.|..+.+.+........|.+.|.-.          .+.+.|...             .-.++.||||++.++ .
T Consensus       273 ~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~-~  351 (364)
T PRK07269        273 EVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIED-A  351 (364)
T ss_pred             EEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-H
Confidence              35777777777774212233444444311          122223211             012568999999875 4


Q ss_pred             HHHHHHHh
Q 014492          413 DALMECLM  420 (423)
Q Consensus       413 ~~l~~al~  420 (423)
                      ++|.+-|+
T Consensus       352 ~dli~dl~  359 (364)
T PRK07269        352 RDLIADLK  359 (364)
T ss_pred             HHHHHHHH
Confidence            66655544

>PRK05939 hypothetical protein; Provisional

Probab=99.90  E-value=2.3e-21  Score=189.94  Aligned_cols=276  Identities=18%  Similarity=0.193  Sum_probs=186.8

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH---HHHHHCCCeEEEecCCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDF  203 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~  203 (423)
                      +++....|++.++++.|.+ ..+++++ ++.++..++.+++++||+|+++.+.|+...   ..++..|++++.++.    
T Consensus        45 g~p~~~~lE~~la~leg~~-~~v~~ss-G~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~----  118 (397)
T PRK05939         45 GTPTTAALEAKITKMEGGV-GTVCFAT-GMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA----  118 (397)
T ss_pred             CCHHHHHHHHHHHHHhCCC-eEEEeCC-HHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence            4455679999999999864 3555555 478999999999999999999999997433   345668999999984    


Q ss_pred             CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccC
Q 014492          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~  281 (423)
                       .|++++++.+. +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|.... ..+      ...+..+++.|+
T Consensus       119 -~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~------~~~gaDivv~S~  190 (397)
T PRK05939        119 -TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLFRP------KDVGASLVINSL  190 (397)
T ss_pred             -CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccccCc------cccCCEEEEecC
Confidence             37899999997 789999999999999999999999999987 99999999986322 111      123567999999


Q ss_pred             hhhhcccCccccccccCHHH----------------------HHHHHHh---cCCCCCcHHHHHHHHHHhCChHHHHHHH
Q 014492          282 SKRAGLAGLRVGYGAFPLSI----------------------IEYLWRA---KQPYNVSVAAEVAACAALQNPIYLEKVK  336 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~~~~----------------------~~~l~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~  336 (423)
                      ||.++..|.++|+++.++..                      +..+...   .....+++.....   +++..+.+..+.
T Consensus       191 sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l---~~rgl~tl~~R~  267 (397)
T PRK05939        191 SKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHR---IAIGAETLALRV  267 (397)
T ss_pred             eecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHH---HHcCcCcHHHHH
Confidence            99999889999988764211                      1111110   1112344444333   333334456666


Q ss_pred             HHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHH--hCCcEE------
Q 014492          337 EALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLA--KMGVMI------  390 (423)
Q Consensus       337 ~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~--~~gI~v------  390 (423)
                      ++..++...+.+.|++.+.+. + +|                +.|..+.+++.++.+...|++.|.  ..+..+      
T Consensus       268 ~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl  347 (397)
T PRK05939        268 DRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCFDFLNRLKLVIKATHLGDTRTL  347 (397)
T ss_pred             HHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHHHHHHhCCcceEccCCCCCCee
Confidence            667779999999998876543 2 33                235677788863323344444442  111111      


Q ss_pred             --EeCC--C-----------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          391 --RHYN--N-----------KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       391 --~~~~--~-----------~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                        .|..  +           .-.++.||||++.++ .++|.+.|+
T Consensus       348 ~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd-~~dLi~dl~  391 (397)
T PRK05939        348 VIPVAPTIYYEMGAERRASMGIADSLIRVSVGIED-EADLIADFE  391 (397)
T ss_pred             eecCcccccccCCHHHHHhcCCCCCeEEEEeCCCC-HHHHHHHHH
Confidence              0110  0           011468999999875 466655554

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.89  E-value=3.7e-21  Score=187.23  Aligned_cols=277  Identities=14%  Similarity=0.081  Sum_probs=197.1

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~  201 (423)
                      +++|....|+++++++.|.  +++++++|+++++..++.+++++||+|++++|.|......    .+..|+++..++.. 
T Consensus        47 ~gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-  123 (377)
T TIGR01324        47 RGTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL-  123 (377)
T ss_pred             CCCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence            4556678999999999984  5788999999999999999999999999999999765433    35578888877532 


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEcc
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S  280 (423)
                          +.+++++.++ +++|+|++++|+||+|.+.+.+++.++|+. |+++|+|++|....... +    ...+..+++.|
T Consensus       124 ----~~e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~-p----l~~gaDivv~S  193 (377)
T TIGR01324       124 ----IGEDIATLIQ-PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK-P----LEHGVDISIQA  193 (377)
T ss_pred             ----CHHHHHHhcC-CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-c----cccCceEEEec
Confidence                2378888886 689999999999999999999999999987 99999999998543211 1    13456799999


Q ss_pred             Chhhhccc-CccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          281 FSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       281 ~SK~~g~~-G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      ++|.++.. +...|+++++++.++++......  ..+++.....+...+   +.+..+.++..++..++.+.|++.+.+.
T Consensus       194 ~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl---~tl~~R~~~~~~~a~~la~~L~~~p~v~  270 (377)
T TIGR01324       194 GTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGL---RTLGVRLKQHQESSLAIAKWLSEQPEVA  270 (377)
T ss_pred             CceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence            99988633 36679999988887776643322  345565444444443   4456667777888888999998766442


Q ss_pred             -e-cC----------------CCceEEEEEeCC-C-CCHHHHHHHHHhCCcEEEeCCC-------------------CCC
Q 014492          358 -P-YP----------------SYSNFILCEVTS-G-MDAKKLKDDLAKMGVMIRHYNN-------------------KEL  398 (423)
Q Consensus       358 -~-~p----------------~~~~~~~~~~~~-~-~~~~~l~~~L~~~gI~v~~~~~-------------------~~~  398 (423)
                       + +|                +.+..+.+++.+ + .....|.+.|.-.++.+.-|+.                   ...
T Consensus       271 ~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~  350 (377)
T TIGR01324       271 RVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLE  350 (377)
T ss_pred             EEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCC
Confidence             2 23                224556677752 1 2345666766544444432222                   012


Q ss_pred             CCeEEEEecChhhHHHHHHHH
Q 014492          399 KGYVRVSVGKPEHTDALMECL  419 (423)
Q Consensus       399 ~~~iRis~~~~~~~~~l~~al  419 (423)
                      ++.||||++.++ .++|.+-|
T Consensus       351 ~~liR~svGlE~-~~dl~~dl  370 (377)
T TIGR01324       351 GPLIRVHIGLEN-VDDLKADL  370 (377)
T ss_pred             CCEEEEEeCCCC-HHHHHHHH
Confidence            357999999865 45564444

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.89  E-value=6.4e-21  Score=188.46  Aligned_cols=319  Identities=15%  Similarity=0.192  Sum_probs=213.1

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+++.++|+..+  .+.++ .+|++.+|+.+ +..    +..|..+...+|.+.++++.+  .+.++++++++++++.+
T Consensus        35 d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e~A  112 (406)
T PRK12381         35 DQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAA  112 (406)
T ss_pred             eCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHHHH
Confidence            3457789999775  23333 37888888876 221    122333345678888888875  36999999999999999


Q ss_pred             HHHhc--------CCCCeEEEcCCCchhhHHHHHHCCCeEE-E---ecCC----CCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492          163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVV-K---VPRK----SDFSLNVELIADAVEREKPKCIFLTS  226 (423)
Q Consensus       163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-~---v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (423)
                      ++...        .....|+....+|+.....+...+.... .   .|..    .....|++.+++.+. .++++|++ .
T Consensus       113 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavii-E  190 (406)
T PRK12381        113 LKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-DQTCAVIV-E  190 (406)
T ss_pred             HHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-CCeeEEEE-e
Confidence            98542        1346799999999866544333222110 0   0100    011347899999886 57888887 5


Q ss_pred             CCCCcCcCC--CHHHHHHHHc---C-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccC
Q 014492          227 PNNPDGSII--NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       227 p~NPtG~~~--~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                      |.|++|-++  +.+.+++|.+   . |+++|+||+|.++...+....  ..+..+.   +.|+||.++ +|+|+||++++
T Consensus       191 Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pD---i~t~sK~l~-gG~~ig~~~~~  266 (406)
T PRK12381        191 PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD---VLTTAKALG-GGFPIGAMLTT  266 (406)
T ss_pred             CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCC---EEEehhhhh-CCCceEEEEEc
Confidence            889998654  5666666555   3 999999999987754433221  1111222   358999998 89999999999


Q ss_pred             HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEEEeCC
Q 014492          299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTS  372 (423)
Q Consensus       299 ~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~~~~  372 (423)
                      +++++.+.....  .|+.+++.+.++.++|+..+ ..+.+++++++.+++.+.|+++.    .+......|.++++.+++
T Consensus       267 ~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~  345 (406)
T PRK12381        267 EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN-TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNA  345 (406)
T ss_pred             HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecC
Confidence            999988765332  36778999988888775321 23467778888888888887652    222234668888998864


Q ss_pred             CC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 GM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 ~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ..  ....+.+.|.++||.+.+.+    ++.+||+++...+.+++++++++|
T Consensus       346 ~~~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l  393 (406)
T PRK12381        346 EYAGKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRF  393 (406)
T ss_pred             chhhHHHHHHHHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence            32  45778888999999997643    468999986433335555555544

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.89  E-value=1.1e-20  Score=184.91  Aligned_cols=268  Identities=17%  Similarity=0.184  Sum_probs=189.3

Q ss_pred             HHHHhc-CCCCCCCCCcc-hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHC
Q 014492          114 REALGQ-LKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN  190 (423)
Q Consensus       114 ~~al~~-~~~~~~Y~~~g-~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~  190 (423)
                      .+++.+ +..+..|+++. ..++++.+++++|.  +++++++|+++++.+++..+ +++||+|+++.|+|..+...++..
T Consensus        14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~   91 (375)
T PRK11706         14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR   91 (375)
T ss_pred             HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc
Confidence            444444 23334455443 46788889999886  58999999999999887765 689999999999999999999999


Q ss_pred             CCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhh
Q 014492          191 GAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRME  267 (423)
Q Consensus       191 g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~  267 (423)
                      |++++.++.++ ++.+|++++++.++ .++|+|+++   |++|...+.+++.++|+. |++||+|++|+.+. +.+....
T Consensus        92 G~~~v~~d~d~~~~~~d~~~le~~i~-~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g  167 (375)
T PRK11706         92 GAKIVFVDIRPDTMNIDETLIEAAIT-PKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALG  167 (375)
T ss_pred             CCEEEEEecCCCcCCcCHHHHHHhcC-CCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeee
Confidence            99999999764 46799999999997 589999976   469999999999999987 99999999998775 3332222


Q ss_pred             hhccCCcEEEEccCh--hhhcccCccccccccCHHHHHHHHHhcCC-------------------CCCcHH-HHHHHHHH
Q 014492          268 WVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFPLSIIEYLWRAKQP-------------------YNVSVA-AEVAACAA  325 (423)
Q Consensus       268 ~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~~~~~~~l~~~~~~-------------------~~~~~~-~~~a~~~~  325 (423)
                      ..   . .+.+.||+  |.++ +|.+.+++..++++.+++...+..                   ++.+.. ....+...
T Consensus       168 ~~---~-~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~  242 (375)
T PRK11706        168 TI---G-HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYL  242 (375)
T ss_pred             cC---c-CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHH
Confidence            11   1 23444544  9986 588878888788888877655421                   112211 11111112


Q ss_pred             hCChHHHHHHHHHHHHHHHHHHHHHccCC---CCee--cCCC----ceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492          326 LQNPIYLEKVKEALIKERERLFKLLKDVP---FLNP--YPSY----SNFILCEVTSGMDAKKLKDDLAKMGVMIRH  392 (423)
Q Consensus       326 l~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~----~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~  392 (423)
                      +...+.+++..++-+++.+++.+.|++++   ++..  .+.+    ..++++.++++.+.+++.+.|.++||.++.
T Consensus       243 ~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~  318 (375)
T PRK11706        243 WAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEAGIMAVF  318 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHCCCCccc
Confidence            22223456666666777778888887764   2321  1222    235567777667899999999999998763

>TIGR01814 kynureninase kynureninase

Probab=99.89  E-value=6e-21  Score=188.92  Aligned_cols=313  Identities=17%  Similarity=0.117  Sum_probs=209.9

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC----CCC--CC-CC--Cc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL----KFP--YI-YP--DP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~----~~~--~~-Y~--~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .++++|+.+... +.++.+.+++.+.    ...  .. +.  ..  ...+.++.+ +++|+++++|++|+|++++++.++
T Consensus        26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~  103 (406)
T TIGR01814        26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLL  103 (406)
T ss_pred             CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHH
Confidence            457999976644 3467777777542    110  11 11  11  122333335 789999999999999999999999


Q ss_pred             HHhcCCC---CeEEEcCCCchh--h--HHHHHHCCCeE----EEecCCCCCCCCHHHHHHHhh--cCCceEEEEcCCCCC
Q 014492          164 RCVLDPG---DKIVDCPPTFTM--Y--EFDAAVNGAAV----VKVPRKSDFSLNVELIADAVE--REKPKCIFLTSPNNP  230 (423)
Q Consensus       164 ~~l~~~g---d~Vl~~~p~y~~--~--~~~~~~~g~~~----~~v~~~~~~~~d~~~l~~~i~--~~~~~~i~l~~p~NP  230 (423)
                      ..+++++   +.|++....|+.  +  ...++..|+++    +.++.+.++.+|++++++.+.  .+++++|++++++|.
T Consensus       104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~  183 (406)
T TIGR01814       104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY  183 (406)
T ss_pred             HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence            9887664   368888889975  2  23455678887    566655556789999988874  267999999999999


Q ss_pred             cCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHh
Q 014492          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA  308 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~  308 (423)
                      ||.++|.+++.++|+. |+++++|++++....   . ..+...+-.+++.|.+|.+ |.+|  .| ++..++....+...
T Consensus       184 tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~---~-id~~~~gvD~~~~s~hK~l~g~pG--~~-l~v~~~~~~~~~p~  256 (406)
T TIGR01814       184 TGQLFDMAAITRAAHAKGALVGFDLAHAVGNV---P-LDLHDWGVDFACWCTYKYLNAGPG--AG-AFVHEKHAHTERPR  256 (406)
T ss_pred             cceecCHHHHHHHHHHcCCEEEEEcccccCCc---c-cccccCCCCEEEEcCccccCCCCC--eE-EEEehhhhhhcCCC
Confidence            9999999999999997 999999999985332   1 1122345568999999965 3345  33 33322222222110


Q ss_pred             c-------------------------CCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCC----CCe
Q 014492          309 K-------------------------QPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVP----FLN  357 (423)
Q Consensus       309 ~-------------------------~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~----~~~  357 (423)
                      .                         ...+++..+..++.++++..  ..+++.+++.+++.+++.+.|+++.    .+.
T Consensus       257 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~  336 (406)
T TIGR01814       257 LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLT  336 (406)
T ss_pred             CCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceE
Confidence            0                         01235666666666666532  2257778888899999999887642    243


Q ss_pred             ec-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhhh
Q 014492          358 PY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMHL  422 (423)
Q Consensus       358 ~~-p~----~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~l  422 (423)
                      +. |.    .+..+.+.++  .+..++.+.|.++||.+....    ++.||||+ .   +.++.+++.++|+.+
T Consensus       337 i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~gi~v~~~~----~~~iRiS~~~~~nt~~did~l~~~l~~~  404 (406)
T TIGR01814       337 IITPRDHAQRGCQLSLTHP--VPGKAVFQALIKRGVIGDKRE----PSVIRVAPVPLYNTFVDVYDAVNVLEEI  404 (406)
T ss_pred             EeCCCChhhcCCeEEEEec--CCHHHHHHHHHHCCEEEeccC----CCeEEEechhccCCHHHHHHHHHHHHHH
Confidence            32 21    2446667776  467889999999999886432    46999998 3   556677777777653

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.89  E-value=8.5e-21  Score=185.04  Aligned_cols=268  Identities=17%  Similarity=0.190  Sum_probs=186.5

Q ss_pred             HHHHHHHhcC-CCCCCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492          111 PEVREALGQL-KFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (423)
Q Consensus       111 ~~v~~al~~~-~~~~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (423)
                      ++..+++.+. ..+..++ .+-..++++.+++++|.  +++++|+|+++++.+++.++ ++|||+|++++++|..+...+
T Consensus        11 ~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~   88 (376)
T TIGR02379        11 GQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF   88 (376)
T ss_pred             HHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence            4445666553 2222332 22357889999999885  57999999999999999887 799999999999999988888


Q ss_pred             HHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCc
Q 014492          188 AVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (423)
Q Consensus       188 ~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~  264 (423)
                      ...|++++.++.+. ++.+|++++++.++ .++|+|+   |+||+|...+.+++.++|+. |++||+|++|+.+. +.+.
T Consensus        89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~  164 (376)
T TIGR02379        89 VLRGAKIVFVDIRPDTMNIDETLIESAIT-HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR  164 (376)
T ss_pred             HHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc
Confidence            89999999999764 47899999999997 6899987   67789999999999999997 99999999998765 3332


Q ss_pred             hhhhhccCCcEEEEccC--hhhhcccCccccccccC-HHHHHHHHHhcCC-----------------------CCCcHHH
Q 014492          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----------------------YNVSVAA  318 (423)
Q Consensus       265 ~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-----------------------~~~~~~~  318 (423)
                      ......    .+.+.||  +|.+. +|.+.|+++.+ +++.++++..+..                       +.++.+.
T Consensus       165 ~~g~~~----~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~  239 (376)
T TIGR02379       165 ALGSIG----HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQ  239 (376)
T ss_pred             ccCCCC----CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHH
Confidence            222111    1333333  37775 67788998875 7788877754321                       1122233


Q ss_pred             HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC---CCee--cCCCc----eEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP---FLNP--YPSYS----NFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~--~p~~~----~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                      .+.+...|   +.+++..++-+++.++..+.|.++.   ....  .+.+.    .+.++.++++.+.+++.+.|.++||.
T Consensus       240 Aa~g~~qL---~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~  316 (376)
T TIGR02379       240 AAYLWAQL---EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNELIKYLKEQEIM  316 (376)
T ss_pred             HHHHHHHH---HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHHHHHHHHHCCCC
Confidence            22222323   4455555555566666667766543   1111  12221    23356776555789999999999998


Q ss_pred             EEe
Q 014492          390 IRH  392 (423)
Q Consensus       390 v~~  392 (423)
                      ++.
T Consensus       317 ~~~  319 (376)
T TIGR02379       317 AVF  319 (376)
T ss_pred             ccc
Confidence            873

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=2e-20  Score=183.67  Aligned_cols=278  Identities=15%  Similarity=0.159  Sum_probs=193.8

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD  202 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~  202 (423)
                      .++....|++.++++.|.  +..+.+++++.|+.+++.+++++||+|+++.++|......    +...|+++..+..   
T Consensus        59 ~nPtv~~lE~~la~leg~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~---  133 (432)
T PRK06702         59 GNPTLAAFEQKLAELEGG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP---  133 (432)
T ss_pred             CCcHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC---
Confidence            356678999999999985  3578899999999999999999999999999999744443    5778999999853   


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                       .+|+++++++++ +++|+|++++|+||++.+.+.+++.++|+. |+++|+|++|..    +..... -.++..|++.|+
T Consensus       134 -~~d~~~l~~~I~-~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t----P~~~~p-l~~GADIvv~S~  206 (432)
T PRK06702        134 -NLTADEIVALAN-DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT----PYLCQA-FEHGANIIVHST  206 (432)
T ss_pred             -CCCHHHHHHhCC-cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc----hhhCCh-hhcCCCEEEEcc
Confidence             578999999997 789999999999999999999999999997 999999999851    111111 134455999999


Q ss_pred             hh-----hhcccCccc-----cccccC-HHHH---------------------HHHH--Hh-cCCCCCcHHHHHHHHHHh
Q 014492          282 SK-----RAGLAGLRV-----GYGAFP-LSII---------------------EYLW--RA-KQPYNVSVAAEVAACAAL  326 (423)
Q Consensus       282 SK-----~~g~~G~R~-----G~i~~~-~~~~---------------------~~l~--~~-~~~~~~~~~~~~a~~~~l  326 (423)
                      ||     +.+++|.++     +|...+ ++++                     .+..  .. .....++++....+...|
T Consensus       207 TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL  286 (432)
T PRK06702        207 TKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGL  286 (432)
T ss_pred             ccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhcc
Confidence            99     777788776     555432 1111                     1111  11 112467788777777777


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecC-----------------CCceEEEEEeCCC-CCHHHHHHHHHhC
Q 014492          327 QNPIYLEKVKEALIKERERLFKLLKDVPFLN--PYP-----------------SYSNFILCEVTSG-MDAKKLKDDLAKM  386 (423)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~  386 (423)
                      +.   ++.+.++..++...+.+.|++.+.+.  .+|                 +.|..+.+.+.++ .....|++.|.=-
T Consensus       287 ~T---l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~  363 (432)
T PRK06702        287 ET---LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLA  363 (432)
T ss_pred             Cc---HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccc
Confidence            54   55566666789999999998876543  233                 1245677787532 2234555555311


Q ss_pred             CcEEE----------eCCC-------------CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          387 GVMIR----------HYNN-------------KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       387 gI~v~----------~~~~-------------~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      .+.+.          |...             .-.++.||||++.++ .|+|.+-|+
T Consensus       364 ~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd-~eDLi~Dl~  419 (432)
T PRK06702        364 TLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIED-VSDIIADLE  419 (432)
T ss_pred             eeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEeccCC-HHHHHHHHH
Confidence            22221          1110             011468999999865 466665554

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=5.6e-21  Score=186.36  Aligned_cols=279  Identities=20%  Similarity=0.235  Sum_probs=190.5

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch-hhHH---HHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEF---DAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~---~~~~~g~~~~~v~~  199 (423)
                      .+|+++...+|++.++++.|.+ ..+++++|. .++..++ .++++||+|+++.|.|. .|..   .++..|++++.++.
T Consensus        45 ~r~~~p~~~~Le~~lA~l~g~~-~~~~~~sG~-aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  121 (377)
T PRK07671         45 SRTGNPTRAALEELIAVLEGGH-AGFAFGSGM-AAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT  121 (377)
T ss_pred             CCCCChHHHHHHHHHHHHhCCC-ceEEeCCHH-HHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence            4567777899999999999964 457766665 5777666 47899999999999997 4443   33457999999873


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+.    ..+..+++
T Consensus       122 -----~d~~~l~~ai~-~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~p~----~~g~Divv  190 (377)
T PRK07671        122 -----SNLEEVEEAIR-PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ-SPI----SLGADIVL  190 (377)
T ss_pred             -----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCeEEE
Confidence                 38999999997 689999999999999999999999999987 9999999999754332 122    23446999


Q ss_pred             ccChhhhcccC-cccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|+||.++.++ .-.|+++. ++++++++...+..  ..+++.....+   +...+.+..+.++..++..++.+.|++.+
T Consensus       191 ~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~---~~~l~tl~~R~~~~~~na~~la~~L~~~~  267 (377)
T PRK07671        191 HSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLL---LRGLKTLGIRMEEHETNSRAIAEFLNNHP  267 (377)
T ss_pred             ecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHH---HcCcChHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999987443 23465555 56788877765544  23455444433   33334466677788899999999998876


Q ss_pred             CCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------------------
Q 014492          355 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN---------------------  395 (423)
Q Consensus       355 ~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~---------------------  395 (423)
                      .+. + +|                +.|..+.+++.+......|++.|.=-.+.+.-|+.                     
T Consensus       268 ~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~  347 (377)
T PRK07671        268 AVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQYFTLAESLGAVESLISIPSQMTHASIPADRRK  347 (377)
T ss_pred             CeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCcceEccCCCCCCeEeECCCccccccCCHHHHH
Confidence            442 1 22                12456667773212234444444311111111110                     


Q ss_pred             --CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          396 --KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       396 --~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                        .-.++.||||++.++ .++|.+-|+
T Consensus       348 ~~gi~~~liR~svGlE~-~~dl~~dl~  373 (377)
T PRK07671        348 ELGITDGLIRISVGIED-GEDLIEDLA  373 (377)
T ss_pred             hcCCCCCeEEEEeccCC-HHHHHHHHH
Confidence              012468999999876 466766554

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.89  E-value=1.5e-20  Score=188.93  Aligned_cols=316  Identities=18%  Similarity=0.189  Sum_probs=213.1

Q ss_pred             cCCCCCCCCCCHHHHHHHhcCC-C--CCCC-CC---cch----HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH--HH-H
Q 014492          100 IDANENPYGPPPEVREALGQLK-F--PYIY-PD---PES----RRLRAALAKDSGLESDHILVGCGADELIDLI--MR-C  165 (423)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~~-~--~~~Y-~~---~g~----~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~--~~-~  165 (423)
                      ++.|+..+..+|.+.+++.+.. .  .+.| |.   .|.    .++++.+++++|++...+..++|+++.+..+  ++ .
T Consensus        73 ~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~  152 (481)
T PRK04366         73 YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAY  152 (481)
T ss_pred             ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHH
Confidence            5566677777888888887641 1  1445 22   233    3566777777898755666677777665533  32 3


Q ss_pred             hcCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-CCHHHH
Q 014492          166 VLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDL  240 (423)
Q Consensus       166 l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~~~l  240 (423)
                      +.++||    +|+++.|.|+.+...++..|++++.+|.+.++.+|++++++.+. .++++|++++|| |||.+ .+.+++
T Consensus       153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-~~t~~V~v~~Pn-~tG~~~~dl~eI  230 (481)
T PRK04366        153 HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-EDTAALMLTNPN-TLGLFERNILEI  230 (481)
T ss_pred             hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-cCCeEEEEeCCC-CccccchHHHHH
Confidence            456776    99999999999999999999999999987778999999999996 689999999998 99976 467888


Q ss_pred             HHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHHHh-------
Q 014492          241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA-------  308 (423)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~-------  308 (423)
                      .++++. |+++++|+++.....+..   .....+..+++++.+|.+|.|    |-.+|++.+.+++.+.+...       
T Consensus       231 ~~~a~~~gal~iVD~a~~~~~~g~~---~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~  307 (481)
T PRK04366        231 AEIVHEAGGLLYYDGANLNAILGKA---RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD  307 (481)
T ss_pred             HHHHHHcCCEEEEEecChhhhcccC---CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCC
Confidence            888876 999999999853211111   122345578999999987644    34578888777766654200       


Q ss_pred             --------------cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EEEEe
Q 014492          309 --------------KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEV  370 (423)
Q Consensus       309 --------------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~~~~  370 (423)
                                    ...++.+.....++..++..  .+.+++..++..++.+++.+.|+++..+ ..+ ...+  ..++.
T Consensus       308 ~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~-~~~-~~~~~~~~~~~  385 (481)
T PRK04366        308 RYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDL-PYD-RPCMHEFVLSG  385 (481)
T ss_pred             ceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcc-cCC-CCeeEEEEEEC
Confidence                          00112223333444444432  3456677777788899999999886212 222 1111  22332


Q ss_pred             C----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          371 T----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       371 ~----~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      +    .+.+..++.+.|.++||.+.....+ ...+++|++++   +.+++|+|.++|+++
T Consensus       386 ~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i  445 (481)
T PRK04366        386 KKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQI  445 (481)
T ss_pred             ccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence            2    1457899999999999987633222 23679999986   466778888877654

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.89  E-value=7e-21  Score=186.35  Aligned_cols=267  Identities=20%  Similarity=0.242  Sum_probs=188.8

Q ss_pred             HHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHH
Q 014492          111 PEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA  188 (423)
Q Consensus       111 ~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~  188 (423)
                      ++..+++.+ +..+..|+.+...+|++++++++|.+  ++++++|+++++.+++.++ +++||+|++++|+|..+...+.
T Consensus        14 ~~e~~~~~~~l~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~   91 (379)
T PRK11658         14 DEELAAVKEVLRSGWITTGPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIV   91 (379)
T ss_pred             HHHHHHHHHHHHcCCccCCHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHH
Confidence            333455544 22333345667889999999999974  6788899999999999998 7999999999999999888888


Q ss_pred             HCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCch
Q 014492          189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR  265 (423)
Q Consensus       189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~  265 (423)
                      ..|++++.++.+ +++.+|++++++.+. +++|+|+   |+|++|...+.+++.++|+. |++||+|++|+... +.+..
T Consensus        92 ~~G~~~v~vd~~~~~~~~d~~~l~~~i~-~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~  167 (379)
T PRK11658         92 LLGATPVMVDVDRDTLMVTPEAIEAAIT-PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRH  167 (379)
T ss_pred             HcCCEEEEEecCCCcCCcCHHHHHHhcc-cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCee
Confidence            999999999975 456789999999997 6899887   66779999999999999987 99999999998533 22211


Q ss_pred             hhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC--------------------------CCCcHHH
Q 014492          266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------------------YNVSVAA  318 (423)
Q Consensus       266 ~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------------------~~~~~~~  318 (423)
                         +...+.  .+.||++...+++.+.|+++.+ +++.++++.....                          +.++.+ 
T Consensus       168 ---~g~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l-  241 (379)
T PRK11658        168 ---IGARGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADI-  241 (379)
T ss_pred             ---cCCCCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHH-
Confidence               122222  3455654444566678888874 7777777653311                          011111 


Q ss_pred             HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCC----ceEE-EEEeCC---CCCHHHHHHHHHhCCcE
Q 014492          319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSY----SNFI-LCEVTS---GMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~----~~~~-~~~~~~---~~~~~~l~~~L~~~gI~  389 (423)
                       .|+.... ..+.+++..++-+++.+++.+.|+++++..+ .|..    .+++ .+.++.   +.+.+++.+.|.++||.
T Consensus       242 -~AAl~~~-ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~  319 (379)
T PRK11658        242 -NAAIALV-QLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIG  319 (379)
T ss_pred             -HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCC
Confidence             2222222 2245677777778888888899988765432 2221    2233 244432   45789999999999998


Q ss_pred             EE
Q 014492          390 IR  391 (423)
Q Consensus       390 v~  391 (423)
                      ++
T Consensus       320 ~~  321 (379)
T PRK11658        320 TG  321 (379)
T ss_pred             Cc
Confidence            76

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.89  E-value=5.1e-20  Score=174.88  Aligned_cols=309  Identities=19%  Similarity=0.172  Sum_probs=235.4

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Y~~~g--~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      .|...+++|++++..-..+++-|+..  ..++.+.+...++.+. +-++++.+++.+++.++..+++|||+|++..-...
T Consensus        12 GP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~F   91 (383)
T COG0075          12 GPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKF   91 (383)
T ss_pred             CCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChH
Confidence            45566899999998744435556652  5788888889999764 56677888899999999999999999987666553


Q ss_pred             --hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh-cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc
Q 014492          182 --MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (423)
Q Consensus       182 --~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~  257 (423)
                        .+...++.+|++++.+..+.+..+|++++++.++ +++.++|.++|.-.+||+..|.++|.++++. |.++|+|.+=+
T Consensus        92 G~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS  171 (383)
T COG0075          92 GERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS  171 (383)
T ss_pred             HHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEeccc
Confidence              6778899999999999988888899999999998 3578899999999999999999999999998 99999999876


Q ss_pred             cccCCCchhhhhccCCcEEEEccChhhhcc-cCccccccccCHHHHHHHHHh--------------------cCCCCCcH
Q 014492          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRA--------------------KQPYNVSV  316 (423)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~i~~~~~~~~~l~~~--------------------~~~~~~~~  316 (423)
                      ....    ...+++++-++++.+-.|+++. ||  +|++..+++..+++...                    ..+++++.
T Consensus       172 ~Gg~----~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv  245 (383)
T COG0075         172 LGGE----PLKVDEWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPV  245 (383)
T ss_pred             CCCc----ccchhhcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCH
Confidence            3321    1223456777888888999875 35  57788887777665422                    22356777


Q ss_pred             HHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC---c-eEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014492          317 AAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY---S-NFILCEVTSGMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       317 ~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~---~-~~~~~~~~~~~~~~~l~~~L~-~~gI~  389 (423)
                      ....++..+|+.  .+.++.+.++++++.+++++.++++++-. ....   . ....+.+|++.+.+++...++ ++|+.
T Consensus       246 ~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~-~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~  324 (383)
T COG0075         246 NLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLEL-FADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVE  324 (383)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcc-ccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEE
Confidence            788888888875  45689999999999999999999987533 2222   2 345578888888766666666 67988


Q ss_pred             EEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014492          390 IRHYNNKELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       390 v~~~~~~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      +.++..+.....+||+....-..+++..++.
T Consensus       325 i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~  355 (383)
T COG0075         325 IAGGQGPLKGKIFRIGHMGNVRPEDVLAALA  355 (383)
T ss_pred             ecccccccCccEEEEecCccCCHHHHHHHHH
Confidence            8887766667899999643333344444443

>PLN00144 acetylornithine transaminase

Probab=99.88  E-value=3e-20  Score=181.83  Aligned_cols=316  Identities=16%  Similarity=0.145  Sum_probs=207.5

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+++.++|+..+.  ..++ .+|++.+++.+ +..   . ..|......++-+.+++..+  .+.++++++++++++.+
T Consensus        11 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~A   88 (382)
T PLN00144         11 DVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAA   88 (382)
T ss_pred             eCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHH
Confidence            34577899997763  3343 46888888876 221   1 11233334567777776654  46899999999999999


Q ss_pred             HHHhc---CC------------CCeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCCCHHHHHHHh
Q 014492          163 MRCVL---DP------------GDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAV  214 (423)
Q Consensus       163 ~~~l~---~~------------gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i  214 (423)
                      ++...   ..            ..+|+....+|++....+......             +..+|     ..|++.+++.+
T Consensus        89 lklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~~  163 (382)
T PLN00144         89 IKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVE-----YGNLEAARKLI  163 (382)
T ss_pred             HHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeC-----CCCHHHHHHhc
Confidence            88432   10            246888888887655443332111             11222     12789999988


Q ss_pred             hcCCceEEEEcCCCCCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcc
Q 014492          215 EREKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       215 ~~~~~~~i~l~~p~NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~  287 (423)
                      ...++++|++...+||.|... +   .+++.++|+. |+++|+||+|..|...+....  .....+.   +.||||.++ 
T Consensus       164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD---i~t~sK~l~-  239 (382)
T PLN00144        164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD---IMTLAKPLA-  239 (382)
T ss_pred             CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC---EEEeccccc-
Confidence            656788999886689954433 2   3345555665 999999999998865443221  1122222   678899998 


Q ss_pred             cCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHh---CChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492          288 AGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAAL---QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY  362 (423)
Q Consensus       288 ~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~  362 (423)
                      +|+|+|++++++++.+.+...  ...|+.+++++.++.+.|   +++++.+...+.-+..++.+.+.+.+.+.+......
T Consensus       240 ~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~  319 (382)
T PLN00144        240 GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGV  319 (382)
T ss_pred             CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecC
Confidence            899999999999998887532  234778899988888444   444444444443334455555556556544333358


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++|+++.  .+...+++.+.++||.+.++..   .+.|||+++...+.+++.++++.|
T Consensus       320 G~~~~l~l~--~~~~~~~~~~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l  374 (382)
T PLN00144        320 GLLVGIQLD--VPAGPLVDACRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEIL  374 (382)
T ss_pred             ceEEEEEec--CccHHHHHHHHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHH
Confidence            999999983  3467899999999999988642   489999988633346666666654

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.88  E-value=1.7e-20  Score=185.46  Aligned_cols=316  Identities=15%  Similarity=0.114  Sum_probs=211.1

Q ss_pred             CCCCCeeEcCCCCCCCC---CCHHHHHHHhcC-C-CCCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..++.++|+.++.....   .+|++.+++.+. . ..+.   +..+...++.+.++++++.  +.+++++++++++..++
T Consensus        34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai  111 (401)
T TIGR01885        34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGY--DKVLPMNTGAEAVETAI  111 (401)
T ss_pred             CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCC--CEEEEeCccHHHHHHHH
Confidence            35677899988644333   378999888762 2 2211   2233467899999999874  58899999999999999


Q ss_pred             HHhc---------CC-CCeEEEcCCCchhh-HHHHHHCC------------CeEEEecCCCCCCCCHHHHHHHhhc--CC
Q 014492          164 RCVL---------DP-GDKIVDCPPTFTMY-EFDAAVNG------------AAVVKVPRKSDFSLNVELIADAVER--EK  218 (423)
Q Consensus       164 ~~l~---------~~-gd~Vl~~~p~y~~~-~~~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~--~~  218 (423)
                      +...         .+ .+.|+...-+|+.. .......|            ..++.+|     ..|++++++.+++  .+
T Consensus       112 ~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~l~~~~~~  186 (401)
T TIGR01885       112 KLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP-----YNNLEALEEALEDHGPN  186 (401)
T ss_pred             HHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC-----CCCHHHHHHHHHhcCCC
Confidence            8642         12 36778888888643 22222222            1223333     1268899888853  45


Q ss_pred             ceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCcc
Q 014492          219 PKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLR  291 (423)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R  291 (423)
                      +.+|+++.+++++|.+.+    .+++.++|+. |+++|+||+|..+...+....  .....+.++   +++|.++..|+|
T Consensus       187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~---~~gK~l~~g~~~  263 (401)
T TIGR01885       187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV---LLGKALSGGVYP  263 (401)
T ss_pred             EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE---EeeccccCCCCC
Confidence            678888899999999997    6677777776 999999999987654332211  111123333   467999866699


Q ss_pred             ccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC--CCeecCCCceEEE
Q 014492          292 VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFIL  367 (423)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~p~~~~~~~  367 (423)
                      +|++++++++++.+.....  .++.+++++.++.++|+..+. +...++.+++.+++.+.|++++  .+...++.|.+..
T Consensus       264 ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~-~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~  342 (401)
T TIGR01885       264 VSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE-EKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNA  342 (401)
T ss_pred             cEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEE
Confidence            9999999999887754222  356788888888888864221 1345667777889999998874  2222345566666


Q ss_pred             EEeCCC---CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          368 CEVTSG---MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       368 ~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.++..   .+..++++.|.++||.+.+..    ++.+||++....+.+++.+++++|
T Consensus       343 i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l  396 (401)
T TIGR01885       343 IVIDESKTGRTAWDLCLKLKEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEII  396 (401)
T ss_pred             EEeccCcchhHHHHHHHHHHhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence            666533   256789999999999998754    578999975323334455555443

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.88  E-value=4.1e-20  Score=182.78  Aligned_cols=318  Identities=15%  Similarity=0.119  Sum_probs=207.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC--C-CCCCC-------CCcchHHHHH----HHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL--K-FPYIY-------PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~--~-~~~~Y-------~~~g~~~lr~----~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+.|-.++|..  +|.+++++...  . ++.+|       +++...+|++    .+++++|.+ ..++.+++++.|+..
T Consensus        29 ~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~-~alv~~~SG~~A~~~  105 (416)
T PRK13034         29 DHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD-YANVQPHSGSQANGA  105 (416)
T ss_pred             cCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC-ceEEecCCcHHHHHH
Confidence            457887777776  78999888763  1 11111       2233567887    999999964 333455677889999


Q ss_pred             HHHHhcCCCCeEEEcCCCchh-hHHHHHH--CCCeE--EEecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTM-YEFDAAV--NGAAV--VKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~--~g~~~--~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.++++|||+|+++..+|.. +...++.  .+...  +.++. ..++.+|++++++.+...++|+|+++++.  +|...
T Consensus       106 ~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~  183 (416)
T PRK13034        106 VYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPREL  183 (416)
T ss_pred             HHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--ccccc
Confidence            999999999999999999875 2222221  12222  23332 23457999999998865678998876654  57888


Q ss_pred             CHHHHHHHHcC-CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHHHhcCCC
Q 014492          236 NDEDLLKILEM-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWRAKQPY  312 (423)
Q Consensus       236 ~~~~l~~i~~~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~~~~~~~  312 (423)
                      +.+++.++|+. |+++|+|++|+...... .....+  ....+++.|++|.++.+  .-|+++++++. .+.++......
T Consensus       184 dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~--~~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~~~~~~  259 (416)
T PRK13034        184 DFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF--PHAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKINSAVFPG  259 (416)
T ss_pred             CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC--CCceEEEEeCcccCCCC--CCeEEEECcHHHHHHHHhhcCCc
Confidence            99999999987 99999999998654321 111111  23568999999988322  23777776544 44444432221


Q ss_pred             ---CCcHHHHHHHH-HHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecC-CCceEEEEEeCC-CCCHHHHHHHHHh
Q 014492          313 ---NVSVAAEVAAC-AALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTS-GMDAKKLKDDLAK  385 (423)
Q Consensus       313 ---~~~~~~~~a~~-~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~~~~~~~~~-~~~~~~l~~~L~~  385 (423)
                         +..+....++. ++++.. ....+.++++.++.+++.+.|++.++-...+ +.+..+.+.+.+ +.+...+.+.|.+
T Consensus       260 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~  339 (416)
T PRK13034        260 LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALER  339 (416)
T ss_pred             ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHh
Confidence               12222223222 222221 2234567889999999999998885422222 466777777753 4466777788889


Q ss_pred             CCcEEEeC------CCCCCCCeEEEEecC-------hhhHHHHHHHHhhh
Q 014492          386 MGVMIRHY------NNKELKGYVRVSVGK-------PEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~------~~~~~~~~iRis~~~-------~~~~~~l~~al~~l  422 (423)
                      +||.+...      ..+..+..+|+++..       .++.+++.++|+++
T Consensus       340 ~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~  389 (416)
T PRK13034        340 AGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDV  389 (416)
T ss_pred             CCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHH
Confidence            99999852      223346789999654       67788888877653

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.88  E-value=1.8e-20  Score=184.67  Aligned_cols=314  Identities=16%  Similarity=0.157  Sum_probs=209.0

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .++++++|+..+  .+.++ .+|++.+++.+ +..    +..|+.+...+|.+.++++.+.  +.+++++++++++..++
T Consensus        32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~Al  109 (397)
T TIGR03246        32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA--DKVFFCNSGAEANEAAL  109 (397)
T ss_pred             CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence            457789999775  23333 47888888876 222    1233444456899999988763  68999999999999999


Q ss_pred             HHhc-------CC-CCeEEEcCCCchhhHHH-HHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492          164 RCVL-------DP-GDKIVDCPPTFTMYEFD-AAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI  222 (423)
Q Consensus       164 ~~l~-------~~-gd~Vl~~~p~y~~~~~~-~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (423)
                      +...       ++ .+.|+..+-.|+..... ....+..            +..+|     ..|++++++.+. +++++|
T Consensus       110 k~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~-~~~aav  183 (397)
T TIGR03246       110 KLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-----YNDLAAAKALIS-DKTCAV  183 (397)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-----CCCHHHHHHHhc-cCeEEE
Confidence            8541       12 35677777777654332 2323321            12222     237899999996 678999


Q ss_pred             EEcCCCCCcCcCC-CHHHHHHH---HcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCcccccc
Q 014492          223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (423)
Q Consensus       223 ~l~~p~NPtG~~~-~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i  295 (423)
                      +++.++++.|... +.+.+++|   |+. |+++|+||+|..+...+....  ..+..+.   +.+++|.+| .|+|+|++
T Consensus       184 i~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pD---i~t~~K~lg-gG~pigav  259 (397)
T TIGR03246       184 IVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD---ILTSAKALG-GGFPIGAM  259 (397)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCC---EEEeehhhh-CCcceeEE
Confidence            9887777777654 65555554   554 999999999987754332211  1111222   337899998 89999999


Q ss_pred             ccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEEE
Q 014492          296 AFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCE  369 (423)
Q Consensus       296 ~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~  369 (423)
                      ++++++++.+.....  .|+.+++++.++.++|+..+ -++..++++++.+++.+.|+++.    .+...+..|.++.+.
T Consensus       260 ~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~  338 (397)
T TIGR03246       260 LTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN-TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAV  338 (397)
T ss_pred             EEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEE
Confidence            999999887754322  36678888888888886422 23567777888888888887653    122234556666676


Q ss_pred             eCCC--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          370 VTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       370 ~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.+.  .....+++.|.++||++.+.+    .+++|++++...+.+++++++++|
T Consensus       339 ~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l  389 (397)
T TIGR03246       339 LTEAYQGKAKQFVNAAAEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARF  389 (397)
T ss_pred             EcCchhhHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHH
Confidence            6432  246788899999999998753    479999766444446666666554

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=1.2e-20  Score=186.24  Aligned_cols=244  Identities=17%  Similarity=0.166  Sum_probs=170.3

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~  200 (423)
                      +++++...+|+++++++.|.  +..++++++++++..++.+++++||+|+++.+.|......+.    ..|+++..++. 
T Consensus        54 r~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-  130 (425)
T PRK06084         54 RIMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-  130 (425)
T ss_pred             CCCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence            44667778999999999984  345567777799999999999999999999999974333332    25777766652 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          .|++++++++. +++++|++++|+||||.+++.+++.++|+. |++||+|++|+..... .+.    ..+..+++.
T Consensus       131 ----~d~e~le~ai~-~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~----~~gaDivv~  200 (425)
T PRK06084        131 ----DDIAALEALID-ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPF----EHGADIVVH  200 (425)
T ss_pred             ----CCHHHHHHHhc-cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-Chh----hcCCCEEEE
Confidence                48999999997 689999999999999999999999999987 9999999999844321 111    234559999


Q ss_pred             cChhhhcccCccccccccC-HHH--HH---H-------------------------H---H---HhcCCCCCcHHHHHHH
Q 014492          280 TFSKRAGLAGLRVGYGAFP-LSI--IE---Y-------------------------L---W---RAKQPYNVSVAAEVAA  322 (423)
Q Consensus       280 S~SK~~g~~G~R~G~i~~~-~~~--~~---~-------------------------l---~---~~~~~~~~~~~~~~a~  322 (423)
                      |++|.++.+|.++|.+++. +.+  .+   .                         .   .   .......+++.....+
T Consensus       201 S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~  280 (425)
T PRK06084        201 SLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLI  280 (425)
T ss_pred             CchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            9999998889998876653 221  00   0                         0   0   0111123444444433


Q ss_pred             HHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------C-CceEEEEEeCCCC-CHHHHHHH
Q 014492          323 CAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------S-YSNFILCEVTSGM-DAKKLKDD  382 (423)
Q Consensus       323 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~-~~~~~~~~~~~~~-~~~~l~~~  382 (423)
                      .   +..+.+..+.++..++..++.+.|++.+.+. + +|                + .|..+.+++.++. ....|++.
T Consensus       281 l---rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~  357 (425)
T PRK06084        281 L---QGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDA  357 (425)
T ss_pred             H---cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHh
Confidence            3   3334466777777888999999999876543 2 22                2 2556777875321 23455555


Q ss_pred             HH
Q 014492          383 LA  384 (423)
Q Consensus       383 L~  384 (423)
                      |.
T Consensus       358 l~  359 (425)
T PRK06084        358 LK  359 (425)
T ss_pred             CC
Confidence            54

>PLN02624 ornithine-delta-aminotransferase

Probab=99.87  E-value=8.3e-20  Score=183.18  Aligned_cols=317  Identities=15%  Similarity=0.156  Sum_probs=202.9

Q ss_pred             CCCCCCeeEcCCCCCCC--C-CCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDANENPY--G-PPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~~--~-~~~~v~~al~~-~~---~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +.+++.++||..+....  + .+|+|.+++.+ +.   .. ..+..+...+|.+.++++++.  +.++++++++++++.+
T Consensus        71 d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A  148 (474)
T PLN02624         71 DPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGY--DMVLPMNTGAEGVETA  148 (474)
T ss_pred             ECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCC--CeEEEeCChHHHHHHH
Confidence            45678899998774433  2 37899888876 22   11 123444567899999999874  6899999999999999


Q ss_pred             HHHhcC---------CC-CeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCCCHHHHHHHhhc--C
Q 014492          163 MRCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVER--E  217 (423)
Q Consensus       163 ~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~--~  217 (423)
                      ++....         ++ ..|+....+|++....+......             +..+|.     .|++.+++.++.  .
T Consensus       149 lklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~  223 (474)
T PLN02624        149 IKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGD  223 (474)
T ss_pred             HHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCC
Confidence            874321         12 25777777887543332221111             122221     268899888853  4


Q ss_pred             CceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhh--hccCCcEEEEccChhhhcccCc
Q 014492          218 KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGL  290 (423)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~g~~G~  290 (423)
                      ++++|+++.++|++|.+++    .+++.++|+. |+++|+||+|..+...+.....  ....+.+   .++||.+|.+++
T Consensus       224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDi---v~lsK~lggG~~  300 (474)
T PLN02624        224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDV---VILGKALGGGVI  300 (474)
T ss_pred             CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCE---EEecccccCCCC
Confidence            6889999999999999998    6667777776 9999999999876543332211  1222222   336899997669


Q ss_pred             cccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCC-CeecCCCc
Q 014492          291 RVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPF-LNPYPSYS  363 (423)
Q Consensus       291 R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~p~~~  363 (423)
                      ++|++++++++++.+....  ..++.+++.+.++.++|+..+. ....++..++.+++.+.|++    ++. +....+.|
T Consensus       301 pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~-~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G  379 (474)
T PLN02624        301 PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD-EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRG  379 (474)
T ss_pred             cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeE
Confidence            9999999998887765433  2356788888888888753211 12333344444444444443    331 22123456


Q ss_pred             eEEEEEeCCC----CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          364 NFILCEVTSG----MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       364 ~~~~~~~~~~----~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.+.+...    ..+.++++.|.++||++.+..    .++|||++....+.+++.+++++|
T Consensus       380 ~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L  438 (474)
T PLN02624        380 LLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH----DTIIRLAPPLSISEDELQECSKAL  438 (474)
T ss_pred             EEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHH
Confidence            6666666421    235678888999999998764    578999974333335555555443

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.87  E-value=1.3e-20  Score=178.35  Aligned_cols=223  Identities=16%  Similarity=0.076  Sum_probs=158.6

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SD  202 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~  202 (423)
                      .+|+.-..++++.+|+++|.+ +.+++++|+++++..++.+++++||+|+++.|+|......+...|++++.++.+  .+
T Consensus        55 ~~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~  133 (294)
T cd00615          55 LDPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY  133 (294)
T ss_pred             CCCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcc
Confidence            346655789999999999964 455669999999999999999999999999999998888888999999998753  22


Q ss_pred             ----CCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcE
Q 014492          203 ----FSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNL  275 (423)
Q Consensus       203 ----~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~  275 (423)
                          ..+|++++++.+.+ .+++++++++| |++|.+++.+++.++|+. |+++|+||+|..+ .+.+.........+.+
T Consensus       134 ~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~d  212 (294)
T cd00615         134 YGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGAD  212 (294)
T ss_pred             cCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCc
Confidence                36899999999964 57899999999 789999999999999987 9999999999753 2322211222235678


Q ss_pred             EEEccChhhhcccCccccccc-cCHHH--HHHHHH---hcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHH
Q 014492          276 IVLRTFSKRAGLAGLRVGYGA-FPLSI--IEYLWR---AKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFK  348 (423)
Q Consensus       276 i~i~S~SK~~g~~G~R~G~i~-~~~~~--~~~l~~---~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~  348 (423)
                      +++.|++|.+  +|++.|+++ .+.+.  .+++..   ..+..+++.+...++..++.. ...-++..+++.++.+.+++
T Consensus       213 iv~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~  290 (294)
T cd00615         213 IVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQ  290 (294)
T ss_pred             EEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            9999999964  788765444 43321  122222   223345555555544444432 11223344445555555555


Q ss_pred             HHc
Q 014492          349 LLK  351 (423)
Q Consensus       349 ~L~  351 (423)
                      .|.
T Consensus       291 ~l~  293 (294)
T cd00615         291 EIN  293 (294)
T ss_pred             HHh
Confidence            553

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PLN02509 cystathionine beta-lyase

Probab=99.87  E-value=2.6e-20  Score=184.44  Aligned_cols=213  Identities=15%  Similarity=0.166  Sum_probs=156.4

Q ss_pred             CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCCC
Q 014492          128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF  203 (423)
Q Consensus       128 ~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~  203 (423)
                      ++....+++.++++.|  .++.++++|+++++..++. ++++||+|+++.|.|..+..    .....|++++.++.    
T Consensus       132 npt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~-ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~----  204 (464)
T PLN02509        132 NPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT----  204 (464)
T ss_pred             CHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHH-HhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC----
Confidence            4446788999999887  3466677777889877664 78999999999999987763    34568999998863    


Q ss_pred             CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccCh
Q 014492          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (423)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (423)
                       .|++++++++. +++|+|++++|+||||.+.+.+++.++|+. |+++|+|++|...... ...    ..+.++++.|++
T Consensus       205 -~d~e~l~~ai~-~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~pl----~~gaDivv~S~t  277 (464)
T PLN02509        205 -TNLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSAT  277 (464)
T ss_pred             -CCHHHHHHhCC-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-Chh----hcCCcEEEecCc
Confidence             36899999996 689999999999999999999999999987 9999999998744322 111    233459999999


Q ss_pred             hhhcccC-ccccccccC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          283 KRAGLAG-LRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       283 K~~g~~G-~R~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      |.++.+| .=.|+++.+ +.+.+++...+.  ...+++.....+.   ...+.+..+.++.+++.+++.+.|++.+.+.
T Consensus       278 K~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~l---r~L~tL~~R~~r~~~nA~~la~~L~~~p~V~  353 (464)
T PLN02509        278 KFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCL---RGIKTMALRIEKQQENARKIAMYLSSHPRVK  353 (464)
T ss_pred             ccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHH---hhhhhHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence            9876433 235777764 444444433322  2234555544333   3345577788888999999999999877553

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.87  E-value=6.4e-20  Score=178.99  Aligned_cols=216  Identities=14%  Similarity=0.125  Sum_probs=155.9

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhh----HHHHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~  199 (423)
                      .+|+++....|+++++++.|.+ ..+++++|+ .++..++. +++|||+|++++|.|+..    ...++..|++++.++.
T Consensus        45 ~r~~~p~~~~Le~~la~l~g~~-~al~~~SG~-~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~  121 (380)
T PRK06176         45 SRSGNPTRFALEELIADLEGGV-KGFAFASGL-AGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT  121 (380)
T ss_pred             cCCCChhHHHHHHHHHHHhCCC-CEEEECCHH-HHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence            4567777889999999999954 456666665 58877775 789999999999999633    3445668999888874


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           .|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|....... +.    ..+..+++
T Consensus       122 -----~d~e~l~~ai~-~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~-p~----~~gaDivv  190 (380)
T PRK06176        122 -----SDLSQIKKAIK-PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN-PL----LLGADIVV  190 (380)
T ss_pred             -----CCHHHHHHhcC-cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC-cc----ccCCCEEE
Confidence                 37999999997 689999999999999999999999999998 99999999998543321 11    23445899


Q ss_pred             ccChhhhcccC-ccccccccC-HHHHHHHHHhcCCC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|++|.++.+| .-.|+++.+ +++.+++...+...  .+++.....+...+   +.+..+.++..++..++.+.|++.+
T Consensus       191 ~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl---~tl~~R~~~~~~~a~~la~~L~~~p  267 (380)
T PRK06176        191 HSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI---KTLGLRMEAHQKNALCVAEFLEKHP  267 (380)
T ss_pred             ecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc---CcHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999887555 335777764 56666665544332  23444433333333   3345555666677778888887765


Q ss_pred             CC
Q 014492          355 FL  356 (423)
Q Consensus       355 ~~  356 (423)
                      .+
T Consensus       268 ~v  269 (380)
T PRK06176        268 KV  269 (380)
T ss_pred             Ce
Confidence            43

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.87  E-value=9.5e-20  Score=180.72  Aligned_cols=328  Identities=14%  Similarity=0.065  Sum_probs=204.1

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~  160 (423)
                      ..+++.+||+..+.  ..++ .+|++.+|+.+ +...  ..   ++.+...++-+.+++...- ..+.++++++++++++
T Consensus        29 D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  108 (420)
T TIGR00700        29 DVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVE  108 (420)
T ss_pred             eCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            35677899997773  3333 46888888876 2211  11   2233345677777777642 2368999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCCCCC-----------CCHHHHHHH
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS-----------LNVELIADA  213 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~-----------~d~~~l~~~  213 (423)
                      .+++...  ....+|+....+|++....+... |-             .+..+|....+.           -+++.+++.
T Consensus       109 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (420)
T TIGR00700       109 NAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAI  188 (420)
T ss_pred             HHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHH
Confidence            9988432  22357888888887554333221 10             122233211100           124566666


Q ss_pred             hh----cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492          214 VE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       214 i~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~  284 (423)
                      +.    ..++.+|++...+.-+|.+++    .+++.++|+. |+++|+||+|..|...+... .....+....+.++||.
T Consensus       189 ~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~-a~~~~~~~pDi~~lsK~  267 (420)
T TIGR00700       189 FVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMF-ACEHEGPEPDLITTAKS  267 (420)
T ss_pred             HHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhH-HHhhcCCCCCEEEeecc
Confidence            52    256788988877777898876    4445556665 99999999999886544322 11122222234468999


Q ss_pred             hcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec
Q 014492          285 AGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY  359 (423)
Q Consensus       285 ~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  359 (423)
                      ++ +|+|+||+++++++++.+...  ...++.+++++.++.++|+.   +++.+...+.-+..++.+.+..+.++.+...
T Consensus       268 l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v  346 (420)
T TIGR00700       268 LA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV  346 (420)
T ss_pred             cc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence            98 999999999999998877532  33477899999988777642   3333333333333444444443445544333


Q ss_pred             CCCceEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          360 PSYSNFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       360 p~~~~~~~~~~~~~-------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.|.++++++.+.       .....+.+.+.++||.+.+++.+  .+++||+++...+.+++.+++++|
T Consensus       347 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l  414 (420)
T TIGR00700       347 RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDIL  414 (420)
T ss_pred             eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHH
Confidence            45588888877321       11345666777999999987543  379999986533346677777665

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=1.3e-19  Score=176.07  Aligned_cols=214  Identities=14%  Similarity=0.082  Sum_probs=159.8

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~  202 (423)
                      .+|..+.|++.++...+ .++.+++++ +++|+..++.+++++||+|+++.|.|..+..    .++..|+++..++.+  
T Consensus        62 gnPt~~~Le~~la~le~-~~~~v~~sS-G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~--  137 (395)
T PRK05967         62 GTPTTDALCKAIDALEG-SAGTILVPS-GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE--  137 (395)
T ss_pred             CChHHHHHHHHHHHHhC-CCCEEEECc-HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC--
Confidence            44455689999998876 334555555 6899999999999999999999999987664    456789999998632  


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                         +.+.++++++ +++|+|++++|+||+|.+.+++++.++|+. |+++|+|++|...... .+.    .++..+++.|.
T Consensus       138 ---~~e~l~~al~-~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-~pl----~~GaDivv~S~  208 (395)
T PRK05967        138 ---IGAGIAKLMR-PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-RPL----DFGVDISIHAA  208 (395)
T ss_pred             ---CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-Chh----HcCCCEEEEec
Confidence               3578999987 689999999999999999999999999987 9999999999854321 111    24556999999


Q ss_pred             hhhhcc-cCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492          282 SKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       282 SK~~g~-~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                      +|.++- .+.-.|+++.+++..+++......  ..+++....   .+++..+.+..+.++..++...+.+.|++.+.+
T Consensus       209 tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~---l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v  283 (395)
T PRK05967        209 TKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTY---QILRGLRTMGIRLEHHRKSALEIARWLEGRPDV  283 (395)
T ss_pred             ccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHH---HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            997542 235578887777776666533322  234555433   444444556777777788999999999987655

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.86  E-value=9.8e-19  Score=171.68  Aligned_cols=284  Identities=15%  Similarity=0.163  Sum_probs=196.6

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFS  204 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~  204 (423)
                      ..+...++|+++++++|.+  +.++++|+++++.+++.++ +++||+|+++.|+|..+...++..|++++.++.+ +++.
T Consensus        27 ~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~  104 (380)
T TIGR03588        27 QGPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGN  104 (380)
T ss_pred             CChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCC
Confidence            3456789999999999974  4566678899999999988 7899999999999999888888999999999974 4678


Q ss_pred             CCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEc
Q 014492          205 LNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       205 ~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~  279 (423)
                      +|++++++.+++   +++++|+++   |++|...+.+++.++|+. |++||+|++|+.+. +.+...... . ...+.+.
T Consensus       105 ~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~-~-~~d~~~~  179 (380)
T TIGR03588       105 IDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNC-R-YADATVF  179 (380)
T ss_pred             cCHHHHHHHhhcccCCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCc-c-ccceEEE
Confidence            999999999963   478988854   568999999999999987 99999999998653 222222211 0 1246677


Q ss_pred             cCh--hhhcccCcccccccc-CHHHHHHHHHhcCC---------------------------CCCcHHHHHHHHHHhCCh
Q 014492          280 TFS--KRAGLAGLRVGYGAF-PLSIIEYLWRAKQP---------------------------YNVSVAAEVAACAALQNP  329 (423)
Q Consensus       280 S~S--K~~g~~G~R~G~i~~-~~~~~~~l~~~~~~---------------------------~~~~~~~~~a~~~~l~~~  329 (423)
                      |++  |.++. | ..|+++. ++++.++++..+..                           +.++.+....+...|   
T Consensus       180 S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL---  254 (380)
T TIGR03588       180 SFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL---  254 (380)
T ss_pred             ecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH---
Confidence            765  87753 3 3566665 46677766543210                           112223323233333   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC-C---ceEE-EEEeC--CCCCHHHHHHHHHhCCcEEEeCCCC-----
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNPY-PS-Y---SNFI-LCEVT--SGMDAKKLKDDLAKMGVMIRHYNNK-----  396 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~---~~~~-~~~~~--~~~~~~~l~~~L~~~gI~v~~~~~~-----  396 (423)
                      +.+++..++-+++.+++.+.|.+++.+.+. +. .   ..++ .+.++  .+.+.+++.+.|.++||.++....+     
T Consensus       255 ~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~  334 (380)
T TIGR03588       255 KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQP  334 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccCh
Confidence            235667777788888999999888765532 21 1   1222 23443  3467899999999999988632210     


Q ss_pred             ---------CCC-------CeEEEEec---ChhhHHHHHHHHhhh
Q 014492          397 ---------ELK-------GYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       397 ---------~~~-------~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                               ..+       ..+++.+.   +.++++.+.++++++
T Consensus       335 ~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~  379 (380)
T TIGR03588       335 YYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV  379 (380)
T ss_pred             hhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence                     011       45777653   566778888887764

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.86  E-value=1.4e-19  Score=170.37  Aligned_cols=323  Identities=18%  Similarity=0.197  Sum_probs=221.9

Q ss_pred             hCCCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC-----CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           90 LGRKPEDIVKIDAN--ENPYG-PPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        90 ~~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-----~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      |+..++.+|||..|  .+.++ .+|.+.+++.+.     ..++.|.++...+|-+.+++..+ ..+.|+++|+++||++.
T Consensus        37 ~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~Ea  115 (404)
T COG4992          37 WDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEA  115 (404)
T ss_pred             ECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHH
Confidence            45678899999877  45555 579999999762     12345666667788888888887 68999999999999999


Q ss_pred             HHHHhc---C-C-CCeEEEcCCCchhhHHHHHHCCCeEEE----ecCCCCC----CCCHHHHHHHhhcCCceEEEEcCCC
Q 014492          162 IMRCVL---D-P-GDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN  228 (423)
Q Consensus       162 ~~~~l~---~-~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~----v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~  228 (423)
                      +++.-.   . + ..+|+....+|+.-...+-..+.+...    -|+.+++    --|+++++++++ +++.+|++...+
T Consensus       116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~-~~taAvivEPIQ  194 (404)
T COG4992         116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID-EDTAAVIVEPIQ  194 (404)
T ss_pred             HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc-cCeEEEEEeccc
Confidence            998432   2 2 247887777776433222222222210    1222221    138999999998 599999999899


Q ss_pred             CCcCcCCCHHH----HHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          229 NPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       229 NPtG~~~~~~~----l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      -..|++.+.++    +++||+. |+++|.||++..+...+..+.  +.+..+.++   ++.|.+| .|+.+|.+++.+.+
T Consensus       195 GEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~---tlaK~Lg-GG~PigA~la~~~~  270 (404)
T COG4992         195 GEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL---TLAKALG-GGFPIGAMLATEEI  270 (404)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEE---Eeecccc-CCccceeeEEchhh
Confidence            99998876554    4556766 999999999998876554332  222233333   4679998 88999999998555


Q ss_pred             HHHHHH--hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492          302 IEYLWR--AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  376 (423)
Q Consensus       302 ~~~l~~--~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~  376 (423)
                      .+.+..  ....|+.|+++.+++.++|+-   ++.+++.++.-...++.|.+...+.+.+.-..+.|.++-+++.....+
T Consensus       271 ~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a  350 (404)
T COG4992         271 ASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRA  350 (404)
T ss_pred             hhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccH
Confidence            554432  234578899998888877763   455555555555555555555555564454578899999999644458


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.+.|.++|+++...+    ++.+|+.....-+.+++.++++++
T Consensus       351 ~~~~~~~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l  392 (404)
T COG4992         351 RDIVRALREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDAL  392 (404)
T ss_pred             HHHHHHHHHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHH
Confidence            899999999999998866    569999976433335555555544

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.85  E-value=3.8e-19  Score=176.17  Aligned_cols=326  Identities=14%  Similarity=0.152  Sum_probs=203.0

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~  160 (423)
                      +.+++.+||+..+.  ..++ .+|++.+++.+ +...  ..   ++.+...++-+.+++..+. ..+.++++++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e  115 (421)
T PRK09792         36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVE  115 (421)
T ss_pred             eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHH
Confidence            45678899997663  3333 46888888876 2211  11   1222334677777776542 2368999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCC-CCC----CHHHHHHHhh----
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSL----NVELIADAVE----  215 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~~----d~~~l~~~i~----  215 (423)
                      .+++...  ....+|+....+|++....+.. .|.             .++.+|.+.+ ..+    +++.+++.+.    
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~  195 (421)
T PRK09792        116 NAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE  195 (421)
T ss_pred             HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccC
Confidence            9988542  1235788888888754432221 111             1233332111 112    3477887775    


Q ss_pred             cCCceEEEEcCCCCCcCcCC-CHHHHHHH---HcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhccc
Q 014492          216 REKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA  288 (423)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~-~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~  288 (423)
                      ..++++|+++..++|+|... +.+.+++|   |+. |+++|+||+|.+|...+...  ......+.   +.+|+|.++ +
T Consensus       196 ~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD---i~t~gK~l~-~  271 (421)
T PRK09792        196 AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD---LMTMAKSLA-G  271 (421)
T ss_pred             CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc---EEEeehhhc-C
Confidence            25688999987799999866 75555555   544 99999999999886544322  22222222   568899998 8


Q ss_pred             CccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492          289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS  363 (423)
Q Consensus       289 G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  363 (423)
                      |+|+||+++++++.+.+...  ...++.+++++.++.++++   +++++++.++.-+..++.+.+..++.+.+....+.|
T Consensus       272 G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~G  351 (421)
T PRK09792        272 GMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLG  351 (421)
T ss_pred             CCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccc
Confidence            99999999999998876532  2347788999886666654   334444444332333333333223455443334458


Q ss_pred             eEEEEEeCCC-------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          364 NFILCEVTSG-------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       364 ~~~~~~~~~~-------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++|+++++.       .....+++.+.++||++.+.+  ...+.|||.++...+.+++.++++.+
T Consensus       352 l~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g--~~~~~irl~P~l~i~~~ei~~~~~~l  415 (421)
T PRK09792        352 SMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG--AYGNVIRFLYPLTIPDAQFDAAMKIL  415 (421)
T ss_pred             eEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC--CCCCEEEEeCCCcCCHHHHHHHHHHH
Confidence            9999999743       235667888889999996422  23579999977533335565555543

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.85  E-value=6.7e-19  Score=174.36  Aligned_cols=215  Identities=16%  Similarity=0.156  Sum_probs=155.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~  201 (423)
                      ++++....|++.++++.|.+  ..++++++++++..++.+++++||+|+++.+.|..    +...++..|++++.++.  
T Consensus        60 ~~~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~--  135 (427)
T PRK05994         60 ITNPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA--  135 (427)
T ss_pred             CCCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC--
Confidence            35556788999999999964  36677888889999999999999999999999974    33445678999999874  


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEcc
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S  280 (423)
                         .|+++++++++ +++++|++++|+||||.+.+.+++.++++. |+++|+|++|...... .+   + ..+..+++.|
T Consensus       136 ---~d~~~l~~ai~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~p---l-~~gaDivv~S  206 (427)
T PRK05994        136 ---DDPASFERAIT-PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RP---I-EHGADIVVHS  206 (427)
T ss_pred             ---CCHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-Cc---c-ccCCcEEEEc
Confidence               37899999997 689999999999999999999999999987 9999999999733211 11   1 2345599999


Q ss_pred             ChhhhcccCccccccccC-H------------------H-----HHHH-----------HHHhc-CCCCCcHHHHHHHHH
Q 014492          281 FSKRAGLAGLRVGYGAFP-L------------------S-----IIEY-----------LWRAK-QPYNVSVAAEVAACA  324 (423)
Q Consensus       281 ~SK~~g~~G~R~G~i~~~-~------------------~-----~~~~-----------l~~~~-~~~~~~~~~~~a~~~  324 (423)
                      ++|.+|.+|-.+|.++.. .                  +     +.+.           ....+ ....+++.....+..
T Consensus       207 ~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~  286 (427)
T PRK05994        207 LTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT  286 (427)
T ss_pred             CccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence            999887666555543331 1                  0     1111           00011 112345544443333


Q ss_pred             HhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492          325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                         ..+.+..+.++..++..++.+.|++.+.+
T Consensus       287 ---~l~tL~~r~~~~~~~a~~la~~L~~~p~v  315 (427)
T PRK05994        287 ---GIETLPLRMQRHSDNALAVAEWLKGHPKV  315 (427)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence               33446677777788888999999887654

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.85  E-value=8.2e-19  Score=175.58  Aligned_cols=320  Identities=13%  Similarity=0.055  Sum_probs=213.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc----c------hH-HHHHHHHHHhCCCCCcEEEe---CCHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP----E------SR-RLRAALAKDSGLESDHILVG---CGADE  157 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~----g------~~-~lr~~ia~~~g~~~~~i~~t---~G~~~  157 (423)
                      .+.|.|-.++|..  +|.+++++... .  +..++|..    |      .+ ..|+.+++++|.+++++.++   +|+++
T Consensus        34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~  111 (452)
T PTZ00094         34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSP  111 (452)
T ss_pred             HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHH
Confidence            4568999989877  48888888763 1  11133321    1      12 25678999999988887666   78889


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----------CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----------NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      ++..++.+++++||+|++....|..+...+..          .+.+++.++.+.++.+|++++++.+.+.+++++++.  
T Consensus       112 an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--  189 (452)
T PTZ00094        112 ANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--  189 (452)
T ss_pred             HHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--
Confidence            99999999999999999987777654332211          113344555555678999999999975578877764  


Q ss_pred             CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHH
Q 014492          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  306 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~  306 (423)
                      ++.+|...|.+++.++|+. |+++++|++|........... .+..+..+++.|++|.++  |.+.|+++.++++.+.+.
T Consensus       190 ~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~-~~~~~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~  266 (452)
T PTZ00094        190 ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP-SPFPYADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIE  266 (452)
T ss_pred             CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC-CCCCCCcEEEcCCccCCC--CCCceEEEEecccchHHH
Confidence            3459999999999999997 999999999985443221111 011134588999999763  333488887765544332


Q ss_pred             Hhc----CCC---CCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCC-CceEEEEEeC-CCC
Q 014492          307 RAK----QPY---NVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNP-YPS-YSNFILCEVT-SGM  374 (423)
Q Consensus       307 ~~~----~~~---~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~-~~~~~~~~~~-~~~  374 (423)
                      ...    .+.   +.+.....++..+++.-  ...++.++++.++++++.+.|++.+ +.+ .+. ......+.+. .+.
T Consensus       267 ~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~  345 (452)
T PTZ00094        267 NKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGI  345 (452)
T ss_pred             HhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCC
Confidence            221    111   44555555556666542  2356778889999999999998764 333 221 1223444443 356


Q ss_pred             CHHHHHHHHHhCCcEEEe-CCC----CCCCCeEEEEec---C----hhhHHHHHHHHhhh
Q 014492          375 DAKKLKDDLAKMGVMIRH-YNN----KELKGYVRVSVG---K----PEHTDALMECLMHL  422 (423)
Q Consensus       375 ~~~~l~~~L~~~gI~v~~-~~~----~~~~~~iRis~~---~----~~~~~~l~~al~~l  422 (423)
                      +..++...|.++||.+.. +..    ...+++||+++.   +    .+|++++.++|+++
T Consensus       346 ~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~  405 (452)
T PTZ00094        346 TGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRA  405 (452)
T ss_pred             CHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence            788888888889999953 221    123579999973   2    67788888887754

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.85  E-value=1.3e-18  Score=173.44  Aligned_cols=327  Identities=16%  Similarity=0.126  Sum_probs=206.9

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.+||+..+  ...++ .+|+|.+++.+ +.   +..  .+..+...+|.+.++++++-..+.+++++++++++..
T Consensus        39 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~  118 (433)
T PRK08117         39 GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEG  118 (433)
T ss_pred             eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence            3457789999877  33444 46888888876 22   111  2333445688888988874345689999999999999


Q ss_pred             HHHHhc--CCCCeEEEcCCCchhhHHHHH-HCC-------------CeEEEecCCCCCC------------CCHHHHHHH
Q 014492          162 IMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKSDFS------------LNVELIADA  213 (423)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~~~~------------~d~~~l~~~  213 (423)
                      +++...  .....|+...-+|+.....+. ..+             ..+..+|.++.+.            .|++.+++.
T Consensus       119 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  198 (433)
T PRK08117        119 ALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESL  198 (433)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHH
Confidence            998421  123678888888875433321 111             0122333221111            145666766


Q ss_pred             hhc----CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492          214 VER----EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       214 i~~----~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~  284 (423)
                      +++    .++.+|++.......|.+.+    .+++.++|+. |+++|+||+|.+|...+..... ...+...-+.++||.
T Consensus       199 ~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~pDi~t~sK~  277 (433)
T PRK08117        199 FKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVVPDIMTIAKG  277 (433)
T ss_pred             HHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCCCCEeehhhh
Confidence            542    46778888877888899887    6677777776 9999999999987544332211 112222234689999


Q ss_pred             hcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCee
Q 014492          285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNP  358 (423)
Q Consensus       285 ~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~  358 (423)
                      +| +|+++|++++++++++.+....  ..++.+++++.++.++|+..+ .+...++++++.+++.+.|++    .+.+.-
T Consensus       278 lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~  355 (433)
T PRK08117        278 IA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIK-EEKLLDNANEMGAYALERLEVLKEKHPVIGD  355 (433)
T ss_pred             cc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhcCCceee
Confidence            99 8999999999999988775332  235678999988888886421 123444555555556555544    332222


Q ss_pred             cCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          359 YPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       359 ~p~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+..|.++.+.+.+.      .....+.+.+.++||.+.+...  ..+++||++....+.+++.+++++|
T Consensus       356 vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l  423 (433)
T PRK08117        356 VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDIL  423 (433)
T ss_pred             eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHH
Confidence            456677777777421      2245677888899999876432  2579999975333345566555554

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.85  E-value=1.8e-18  Score=171.95  Aligned_cols=322  Identities=18%  Similarity=0.192  Sum_probs=197.3

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCCC----CC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY----IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~----~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++.++|+..+  ...++ .+|.+.+|+.+ +....    .| ..+...++-+.|++..+...+.++++++++++++.
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~  116 (443)
T PRK08360         37 DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDG  116 (443)
T ss_pred             ECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHH
Confidence            3567889999877  44454 46888888876 22211    11 22234567777777765434689999999999999


Q ss_pred             HHHHhc--CCCCeEEEcCCCchhhHHHH-HHCCC------------eEEEecCCCC----CC--------CCHHHHHHHh
Q 014492          162 IMRCVL--DPGDKIVDCPPTFTMYEFDA-AVNGA------------AVVKVPRKSD----FS--------LNVELIADAV  214 (423)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~~g~------------~~~~v~~~~~----~~--------~d~~~l~~~i  214 (423)
                      +++...  .....|+.....|++....+ ...|.            .+..+|.++.    +.        .+++.+++.+
T Consensus       117 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  196 (443)
T PRK08360        117 AIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF  196 (443)
T ss_pred             HHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence            988432  22367887777776543221 11221            1233332111    11        1244566666


Q ss_pred             hc----CCceEEEEcCCCCCcCcCCC-H---HHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChh
Q 014492          215 ER----EKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK  283 (423)
Q Consensus       215 ~~----~~~~~i~l~~p~NPtG~~~~-~---~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK  283 (423)
                      .+    .++++|+++..+||+|.+++ .   +++.++|+. |+++|+||+|..|...+...  ...+..++++   ++||
T Consensus       197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii---tlsK  273 (443)
T PRK08360        197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII---TLGK  273 (443)
T ss_pred             HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE---Eecc
Confidence            42    56889998866799999887 3   344455554 99999999999876443321  1222233433   6799


Q ss_pred             hhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCe
Q 014492          284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLN  357 (423)
Q Consensus       284 ~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~  357 (423)
                      .++ +|+|+||+++++++++.+....  ..++.+++++.++.++|+.-+. +...++.+++.+++.+.|+    +.+.+.
T Consensus       274 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~  351 (443)
T PRK08360        274 PLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-KNLLKRAEKLGNYTKKRLEEMKKKHELIG  351 (443)
T ss_pred             ccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence            999 8999999999999998886443  2356788888888888864210 1233444444444444443    344333


Q ss_pred             ecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          358 PYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       358 ~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      -....|.++.+++.+.        ..+..+.+.|.++||++.+..    .+.+||++....+.++++++++.
T Consensus       352 ~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~~~  419 (443)
T PRK08360        352 DVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS----GNVLRIQPPLTIEKEVLDEGLDI  419 (443)
T ss_pred             eeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHH
Confidence            3345677777776321        123567788889999987643    47899976633333444444433

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.84  E-value=2e-19  Score=170.11  Aligned_cols=199  Identities=19%  Similarity=0.158  Sum_probs=157.2

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcCCC-----C-CC-CCC---cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQLKF-----P-YI-YPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~~-----~-~~-Y~~---~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      .+.+.++|+.+.. -+.++.|.+++.+...     + .+ |..   .+.++.|+.+|+++|.++.+|+||+|+|++++++
T Consensus        40 ~~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv  118 (428)
T KOG1549|consen   40 HGTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV  118 (428)
T ss_pred             CCCccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence            3456688887543 2346889999887311     1 12 321   2367899999999999999999999999999999


Q ss_pred             HHHhc-CCCC----eEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          163 MRCVL-DPGD----KIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       163 ~~~l~-~~gd----~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      ++.+. ..+|    +|++..-.|......+   +..|.+++.+|.++++..|++.+++.++ ++|+++.+.+.+|.+|++
T Consensus       119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~  197 (428)
T KOG1549|consen  119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVL  197 (428)
T ss_pred             HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-CCceEEEEEecccCcccc
Confidence            99874 3456    8998888887555444   4479999999988888999999999998 799999999999999999


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      +|.+||.++|+. ++.+++|.+++-.    ...-.+..-+..++..|.+|.||.+|  +|++++.+
T Consensus       198 ~Pv~EI~~icr~~~v~v~~DaAQavG----~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~  257 (428)
T KOG1549|consen  198 QPVKEIVKICREEGVQVHVDAAQAVG----KIPVDVQELNADFLSISAHKIYGPPG--IGALYVRR  257 (428)
T ss_pred             ccHHHHHHHhCcCCcEEEeehhhhcC----CccccHHHcCchheeeecccccCCCc--ceEEEEcc
Confidence            999999999998 9999999999832    22222334455678888999999999  89888875

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.84  E-value=1.2e-18  Score=173.19  Aligned_cols=320  Identities=17%  Similarity=0.118  Sum_probs=206.3

Q ss_pred             CCCCCeeEcCCCCCC--C-CCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           92 RKPEDIVKIDANENP--Y-GPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      .+++.++|+..+...  + ..+|.+.+++.+ +...  ..++.+...+|.+.+++.+. ..+.+++++|+++++..+++.
T Consensus        47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~  125 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRL  125 (426)
T ss_pred             CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHH
Confidence            456789999887532  3 357888888876 2221  22355566788899888764 356899999999999999996


Q ss_pred             hcC--CCCeEEEcCCCchhhHHHHHHC-C------------CeEEEecCC--CCCCCCHHHHHHHhhc--CCceEEEEcC
Q 014492          166 VLD--PGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRK--SDFSLNVELIADAVER--EKPKCIFLTS  226 (423)
Q Consensus       166 l~~--~gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~i~l~~  226 (423)
                      ...  .++.|+...++|+.+...+... |            .....++..  .-...|++++++.+..  .++.+|+++.
T Consensus       126 a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEp  205 (426)
T PRK00062        126 ARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEP  205 (426)
T ss_pred             HHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence            433  2578999999998776333221 1            000000000  0001378899888853  4677888885


Q ss_pred             CCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492          227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       227 p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      ....+|.+.+    .+++.+||+. |+++|+||+|..+..+... ....+..+.   +.++||.++ .|+++|+++++++
T Consensus       206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pD---i~~~gK~l~-~G~p~ga~~~~~~  281 (426)
T PRK00062        206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPD---LTTLGKIIG-GGLPVGAFGGRRE  281 (426)
T ss_pred             CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcc---hHhhhhHhh-CCCcceeeeEHHH
Confidence            5555899988    5666777766 9999999999877432211 111221122   468899998 8999999999999


Q ss_pred             HHHHHHHhc-----CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492          301 IIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  372 (423)
Q Consensus       301 ~~~~l~~~~-----~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~  372 (423)
                      +++.+....     ..++.+++.+.++.++|+.   .+..++.++.....++.|.+.+++.+++.-..+.|.++.+.+.+
T Consensus       282 i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~  361 (426)
T PRK00062        282 IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTD  361 (426)
T ss_pred             HHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEec
Confidence            988875321     2356788888888877763   33455555555555666655555666554334566666665531


Q ss_pred             C-C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          373 G-M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       373 ~-~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      . .         +   ...+.+.|.++||.+.+...    +.+|+++. +.++.+++.+.++
T Consensus       362 ~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~ei~~~~~~l~  419 (426)
T PRK00062        362 EPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQF----EAGFVSAAHTDEDIEKTLEAAR  419 (426)
T ss_pred             CCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCc----CceeeeccCCHHHHHHHHHHHH
Confidence            1 0         1   35788888999999987542    34567654 3444555555544

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.84  E-value=8e-19  Score=173.53  Aligned_cols=243  Identities=14%  Similarity=0.148  Sum_probs=170.0

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~  201 (423)
                      +.++...++++.+|++.|.+  ..++++++++|+.+++.+++++||+|+++...|......    ++..|++++.++.+ 
T Consensus        61 ~~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-  137 (433)
T PRK08134         61 ISNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-  137 (433)
T ss_pred             CcChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-
Confidence            45566789999999999964  368899999999999998999999999999999754332    34589999999853 


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEcc
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S  280 (423)
                          |++++++.++ +++|+|++.+|+||+|.+.+.+++.++++. |+++|+|.++...... ...    ..+..+++.|
T Consensus       138 ----d~~~l~~~i~-~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-~pl----~~GaD~vv~S  207 (433)
T PRK08134        138 ----DIDGWRAAIR-PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-RPF----EHGADLVYHS  207 (433)
T ss_pred             ----CHHHHHHhcC-CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hcCCCEEEec
Confidence                7999999997 689999999999999999999999999997 9999999998743221 111    3445699999


Q ss_pred             ChhhhcccCccccccccC-HH--------------------------------HHHHHH-HhcC--CCCCcHHHHHHHHH
Q 014492          281 FSKRAGLAGLRVGYGAFP-LS--------------------------------IIEYLW-RAKQ--PYNVSVAAEVAACA  324 (423)
Q Consensus       281 ~SK~~g~~G~R~G~i~~~-~~--------------------------------~~~~l~-~~~~--~~~~~~~~~~a~~~  324 (423)
                      .+|.+|..|-.+|.++.. ..                                +..+.+ ....  ...+++.....   
T Consensus       208 ~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l---  284 (433)
T PRK08134        208 ATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQ---  284 (433)
T ss_pred             cccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHH---
Confidence            999887677555554331 10                                000010 0001  12344444333   


Q ss_pred             HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014492          325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP-----------------SYSNFILCEVTSG-MDAKKLKDDLA  384 (423)
Q Consensus       325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L~  384 (423)
                      .+...+.+..+.++..++..++.+.|++.+.+. + +|                 +.|..+.+++.++ .....|++.|.
T Consensus       285 ~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~  364 (433)
T PRK08134        285 LLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLK  364 (433)
T ss_pred             HhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCC
Confidence            333334467777777888899999998876543 1 22                 2355677888532 22445555553

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.84  E-value=2.3e-18  Score=169.52  Aligned_cols=322  Identities=14%  Similarity=0.134  Sum_probs=202.8

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-CC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +... +.   +......++-+.+++..+. .+.++++++++++++.+
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e~A  114 (408)
T PRK04612         36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANEAA  114 (408)
T ss_pred             ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHHHH
Confidence            35678899997763  3344 46888888876 2211 11   2222234666666666542 36899999999999999


Q ss_pred             HHHhc------C--CC-CeEEEcCCCchhhHHHHHH-CCCeEEE---ecCCCC----CCCCHHHHHHHhhcCCceEEEEc
Q 014492          163 MRCVL------D--PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       163 ~~~l~------~--~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~----~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      ++...      +  ++ .+|+....+|++....+.. .|.....   -|...+    ...|++.+++.+.. +..+.++.
T Consensus       115 lklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aavi~  193 (408)
T PRK04612        115 IKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG-GDVAAVML  193 (408)
T ss_pred             HHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC-CCEEEEEE
Confidence            87432      1  12 4688888888755443322 2211110   111111    12378999998863 34455556


Q ss_pred             CCCCCcCcCCC--HHHHH---HHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          226 SPNNPDGSIIN--DEDLL---KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       226 ~p~NPtG~~~~--~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      .|.+++|-+++  .+.+.   ++|+. |+++|+||+|..+...+..... ...+....+.+|||.++ +|+|+|++++++
T Consensus       194 eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~-~~~~~~pdi~t~~K~l~-~G~piga~~~~~  271 (408)
T PRK04612        194 EPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAH-WQEQVTPDIVTLAKALG-GGFPIGAMLAGP  271 (408)
T ss_pred             CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhh-hhcCCCCCEEEEcchhc-CCCceEEEEECH
Confidence            67777886665  33444   45554 9999999999987654432222 12345567889999998 899999999999


Q ss_pred             HHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCC-
Q 014492          300 SIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTS-  372 (423)
Q Consensus       300 ~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~-  372 (423)
                      ++++.+....  ..|+.+++++.++.++|+.-+- ++..++.+++.+++.+.|++    .+.+.-..+.|.++.+.+.. 
T Consensus       272 ~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~  350 (408)
T PRK04612        272 KVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS-PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPA  350 (408)
T ss_pred             HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCc
Confidence            8887765433  2367889999999888864221 24455555566666666554    34333345667888787742 


Q ss_pred             -CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          373 -GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       373 -~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                       ...+..+.+.+.++||++.+.+    .+.+|+.....-+.++++++++.
T Consensus       351 ~~~~a~~i~~~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~  396 (408)
T PRK04612        351 HAGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLAR  396 (408)
T ss_pred             hhhHHHHHHHHHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHH
Confidence             1235678888899999998753    47899986532223445555444

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.84  E-value=2.3e-18  Score=159.06  Aligned_cols=308  Identities=17%  Similarity=0.191  Sum_probs=209.4

Q ss_pred             CCCCCCCCHHHHHHHhcCCC--CCCCCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          103 NENPYGPPPEVREALGQLKF--PYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~--~~~Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      ++|.-++.|+++++|.+.+.  ...|++ +...++++.+++.+|.  +.++|++++|++..+++.+.++||+.|++..-.
T Consensus         6 SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~a   83 (342)
T COG2008           6 SDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICHETA   83 (342)
T ss_pred             cCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEeccc
Confidence            46777899999999998652  356854 4678999999999996  788888888999999999999999999998888


Q ss_pred             chh---hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492          180 FTM---YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (423)
Q Consensus       180 y~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~  247 (423)
                      |..   ........++..+.+....+..+++++++..+...     .+.++++.+.+|.-|+++|+++|++|.+.    |
T Consensus        84 Hi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~  163 (342)
T COG2008          84 HIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHG  163 (342)
T ss_pred             cceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhC
Confidence            842   11222334455555554466799999999987632     24455555666688999999999998775    9


Q ss_pred             CEEEEccCCcccc--CCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCC----CCCcHHHHH
Q 014492          248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP----YNVSVAAEV  320 (423)
Q Consensus       248 ~~li~Deay~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~----~~~~~~~~~  320 (423)
                      +.|.+|.+-..-.  ..+........+-. ++..++||..+.++   | .++++.++++++...+..    +.-..+...
T Consensus       164 l~LHmDGAR~~nA~valg~~~~~~~~~~D-~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA  239 (342)
T COG2008         164 LPLHMDGARLANALVALGVALKTIKSYVD-SVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAA  239 (342)
T ss_pred             CceeechHHHHHHHHHcCCCHHHHHhhCC-EEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHH
Confidence            9999999865321  11122222223322 44456789877665   5 455688988877654432    344566677


Q ss_pred             HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCC
Q 014492          321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELK  399 (423)
Q Consensus       321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~  399 (423)
                      +...+|++.-|... ..+-.++..+|.+.|+..+++.+ .|..+|.+++++++     ...+.|.+.|.....+-.-...
T Consensus       240 ~~~~~l~~~~~~~~-~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~-----~~i~~l~~~~~~~~~~~~~~~~  313 (342)
T COG2008         240 QGLYALEDDVWRLA-ADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE-----SAIEALRLAGALFYRGVLIGAH  313 (342)
T ss_pred             HHHHHHhccHHHHH-HHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh-----HHHHHHHhhchhheeeeeccCC
Confidence            77788887655333 33334568889999987766664 56899999999972     2224555445444432221111


Q ss_pred             -CeEEEEec---ChhhHHHHHHHHhhh
Q 014492          400 -GYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       400 -~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                       ..+|+..+   +.++.+++...++.+
T Consensus       314 ~~~vRfvts~a~~~edv~~~~~~~~~~  340 (342)
T COG2008         314 GEIVRFVTSWATSEEDVDELVAAIKAL  340 (342)
T ss_pred             CceEEEEeeccCCHHHHHHHHHHHHHh
Confidence             47899876   455666666666554

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.84  E-value=1.6e-18  Score=171.26  Aligned_cols=243  Identities=15%  Similarity=0.118  Sum_probs=168.3

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~  202 (423)
                      .++....|++.++++.|.+  ..+++++++.|+..++.+++++||+|++....|.....    .+...|++++.++ +. 
T Consensus        67 ~~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~-  142 (436)
T PRK07812         67 MNPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP-  142 (436)
T ss_pred             CCchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC-
Confidence            3566789999999999964  35666677789999999999999999999988865432    3345788888885 21 


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                        .|+++++++++ +++++|++.+|+||+|.+.+.+++.++++. |+++|+|+++..... ...   + ..+..+++.|+
T Consensus       143 --~d~e~l~~ai~-~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~p---l-~~GaDivv~S~  214 (436)
T PRK07812        143 --DDLDAWRAAVR-PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRP---L-EHGADIVVHSA  214 (436)
T ss_pred             --CCHHHHHHhCC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCc---h-hcCCCEEEEec
Confidence              38999999997 689999999999999999999999999998 999999999874221 111   1 23445888999


Q ss_pred             hhhhcccCccccccccC-HH------------------------------HHHHHH---HhcCCCCCcHHHHHHHHHHhC
Q 014492          282 SKRAGLAGLRVGYGAFP-LS------------------------------IIEYLW---RAKQPYNVSVAAEVAACAALQ  327 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~-~~------------------------------~~~~l~---~~~~~~~~~~~~~~a~~~~l~  327 (423)
                      +|.+|..|--+|.++.. ..                              ++.+..   .......+++.....   +++
T Consensus       215 tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l---~~r  291 (436)
T PRK07812        215 TKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFL---IAQ  291 (436)
T ss_pred             ccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHH---Hhc
Confidence            99987666556655542 11                              000111   111123445544433   333


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecC-----------------CCceEEEEEeCCC-CCHHHHHHHHH
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLN--PYP-----------------SYSNFILCEVTSG-MDAKKLKDDLA  384 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L~  384 (423)
                      ..+.+..+.++..++..++.+.|++.+.+.  .+|                 +.|..+.+++.++ .....|++.|.
T Consensus       292 gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~  368 (436)
T PRK07812        292 GLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALT  368 (436)
T ss_pred             CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCC
Confidence            334467777778889999999999877553  233                 2355677787532 22455666654

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.84  E-value=1.7e-18  Score=168.13  Aligned_cols=216  Identities=11%  Similarity=0.024  Sum_probs=164.5

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~  201 (423)
                      ..+|....|++.++++-|-  +..+++++++.|+..++.+++++||+|+++...|......    ++..|+++..++.  
T Consensus        59 ~~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~--  134 (395)
T PRK08114         59 RGTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP--  134 (395)
T ss_pred             CCChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC--
Confidence            3566778999999998873  5677778899999999999999999999999999654443    4568999999873  


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                         .|.++++++++ +++|+|++.+|.||+|.+.|++++.++++.   |+++++|.++.-... -.+    ...+-.+++
T Consensus       135 ---~d~~~l~~~l~-~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~p----l~~GaDivv  205 (395)
T PRK08114        135 ---LIGADIAKLIQ-PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKA----LDFGIDISI  205 (395)
T ss_pred             ---CCHHHHHHhcC-CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCH----HHcCCcEEE
Confidence               46789999997 689999999999999999999999999987   499999999974322 111    134566999


Q ss_pred             ccChhhhcccC-ccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      .|.+|.++..| .-.|.++.+++..+.+......  ..+++.....+..-   .+.+.-+.++..++...+.+.|++.+.
T Consensus       206 ~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rg---l~TL~lR~~~~~~na~~va~~L~~hp~  282 (395)
T PRK08114        206 QAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRG---LRTLGVRLRQHEESSLKVAEWLAEHPE  282 (395)
T ss_pred             EcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcC---CCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            99999776554 5678777777776666543322  23455554433333   344667778888999999999998765


Q ss_pred             Ce
Q 014492          356 LN  357 (423)
Q Consensus       356 ~~  357 (423)
                      +.
T Consensus       283 V~  284 (395)
T PRK08114        283 VA  284 (395)
T ss_pred             Ee
Confidence            43

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.83  E-value=1.7e-18  Score=183.93  Aligned_cols=320  Identities=15%  Similarity=0.094  Sum_probs=213.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-C----CCC-CCCCc-----chHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-K----FPY-IYPDP-----ESRRLRAALAKDSGLESD--HILVGCGADELIDLI  162 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~-~Y~~~-----g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~  162 (423)
                      ++++|+.+.....++..+.+++..+ .    ..+ .|...     ..++.|+.+++++|.+++  .|++|+|++++++++
T Consensus        34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlv  113 (805)
T PLN02724         34 GVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLV  113 (805)
T ss_pred             CCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHH
Confidence            3689998876654445566655432 1    111 12111     256899999999999765  589999999999999


Q ss_pred             HHHh-cCCCCeEEEcCCCchhhH---HHHHHCCCeEEEecCC--------CCCCCCH--HHHHHHhh---------cCCc
Q 014492          163 MRCV-LDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRK--------SDFSLNV--ELIADAVE---------REKP  219 (423)
Q Consensus       163 ~~~l-~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~--------~~~~~d~--~~l~~~i~---------~~~~  219 (423)
                      +..+ +++||+|++..-.|....   ..++..|+++..++.+        ....+++  +++++.++         ..++
T Consensus       114 a~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t  193 (805)
T PLN02724        114 GETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAY  193 (805)
T ss_pred             HHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCc
Confidence            9987 678999999777775333   3445579999998864        2223333  55666531         1456


Q ss_pred             eEEEEcCCCCCcCcCCCHHHHHHHHcC---------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccC
Q 014492          220 KCIFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAG  289 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~~~l~~i~~~---------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G  289 (423)
                      ++|.+++.+|.||.++|++++.++++.         ++++++|.++.....    ...+...+-.+++.|+.|.+| ..|
T Consensus       194 ~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~----piDv~~~~~Dfl~~S~HK~~GgP~G  269 (805)
T PLN02724        194 NLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS----PPDLSRYPADFVVVSFYKIFGYPTG  269 (805)
T ss_pred             ceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC----CCChhhcCCCEEEEecceeccCCCC
Confidence            899999999999999999988777663         257999999873321    112233455689999999877 335


Q ss_pred             ccccccccCHHHHHHHHHhc--------------------------CCCCCcHHHHHHHHHHhCCh-H-HHHHHHHHHHH
Q 014492          290 LRVGYGAFPLSIIEYLWRAK--------------------------QPYNVSVAAEVAACAALQNP-I-YLEKVKEALIK  341 (423)
Q Consensus       290 ~R~G~i~~~~~~~~~l~~~~--------------------------~~~~~~~~~~~a~~~~l~~~-~-~~~~~~~~~~~  341 (423)
                        +|+++++++..+.+....                          ...+++..+..++.++++.. + .+++..++.++
T Consensus       270 --~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~  347 (805)
T PLN02724        270 --LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWA  347 (805)
T ss_pred             --ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence              799988888776554211                          11245555555666666432 1 25677888999


Q ss_pred             HHHHHHHHHccCC------CCeecCC---------CceEEEEEeCC--C--CCHHHHHHHHHhCCcEEEeCCCC------
Q 014492          342 ERERLFKLLKDVP------FLNPYPS---------YSNFILCEVTS--G--MDAKKLKDDLAKMGVMIRHYNNK------  396 (423)
Q Consensus       342 ~~~~l~~~L~~~~------~~~~~p~---------~~~~~~~~~~~--~--~~~~~l~~~L~~~gI~v~~~~~~------  396 (423)
                      +.+++.+.|++++      .+.++..         .+..+.+.+..  +  +...++...+.++||.++.|...      
T Consensus       348 L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~  427 (805)
T PLN02724        348 LTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACA  427 (805)
T ss_pred             HHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHH
Confidence            9999999998875      3555421         23455555542  1  23444555445889999976541      


Q ss_pred             ----------------------------C-CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          397 ----------------------------E-LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       397 ----------------------------~-~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                                                  + ..+.||+|++   +.+|.++|.++|++
T Consensus       428 ~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~  484 (805)
T PLN02724        428 KYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS  484 (805)
T ss_pred             HHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence                                        0 1388999986   67788888888875

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.83  E-value=4e-18  Score=168.89  Aligned_cols=325  Identities=14%  Similarity=0.137  Sum_probs=204.4

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~  160 (423)
                      +.+++.++|+..+.  ..++ .+|++.+++.+ +...  ..   ++.+...++-+.+++.... ..+.++++++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e  115 (421)
T PRK06777         36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVE  115 (421)
T ss_pred             eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHH
Confidence            45678899997763  3343 46888888876 2211  11   2333345677777777642 2468999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCC-CC----CCHHHHHHHhhc---
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FS----LNVELIADAVER---  216 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~~----~d~~~l~~~i~~---  216 (423)
                      .+++...  ....+|+....+|++....+.. .|.             .+..+|.++. ..    .+++.+++.+.+   
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~  195 (421)
T PRK06777        116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA  195 (421)
T ss_pred             HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence            9988432  1235788888888765544332 121             0122221111 11    236667777642   


Q ss_pred             -CCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhccc
Q 014492          217 -EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLA  288 (423)
Q Consensus       217 -~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~  288 (423)
                       .++.+|++...++..|. +.+.+.+++|.+   . |+++|+||+|..|...+...  ...+..+.+   .++||.++ +
T Consensus       196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDi---v~~sK~l~-~  271 (421)
T PRK06777        196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL---ITMAKSLG-G  271 (421)
T ss_pred             CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCE---Eeeehhhc-C
Confidence             46788888877888886 577666655544   4 99999999999876544321  112222332   36899999 9


Q ss_pred             CccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCC
Q 014492          289 GLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSY  362 (423)
Q Consensus       289 G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~  362 (423)
                      |+|+||+++++++++.+....  ..++.+++++.++.++|+..+. +...++++++.+++.+.|+++    +.+....+.
T Consensus       272 G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~  350 (421)
T PRK06777        272 GMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE-EKLCQRALILGAHLVEVLEKAKASCPAIVDIRAR  350 (421)
T ss_pred             CCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCc
Confidence            999999999999988775432  3467899999999999864221 355666677777777777653    443333455


Q ss_pred             ceEEEEEeCC---CCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          363 SNFILCEVTS---GMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~~~~~~~~~~---~~~----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++.+.+..   +.+    ...+.+.+.++||++.+++.+  .+++||++...-+.+++.+++++|
T Consensus       351 G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l  415 (421)
T PRK06777        351 GSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNIL  415 (421)
T ss_pred             eEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHH
Confidence            5555555532   111    234455567899999887533  369999985333345666666654

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.83  E-value=5.6e-18  Score=151.62  Aligned_cols=298  Identities=16%  Similarity=0.211  Sum_probs=211.5

Q ss_pred             HHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHh-C-----CCCCcEE--EeCCHHHHHHHHHH---HhcCCCCeEE
Q 014492          111 PEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LESDHIL--VGCGADELIDLIMR---CVLDPGDKIV  174 (423)
Q Consensus       111 ~~v~~al~~~----~~~~~Y-~~~g~~~lr~~ia~~~-g-----~~~~~i~--~t~G~~~al~~~~~---~l~~~gd~Vl  174 (423)
                      |.|.++-..+    ...+.| |-.|.+.++++.++.. |     +..++++  -+-|++.|+.+...   .++. ..+|.
T Consensus        51 PvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY  129 (410)
T KOG1412|consen   51 PVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVY  129 (410)
T ss_pred             hhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcc-cceeE
Confidence            5555444332    344778 7789999999888874 4     2334432  33445556655544   3343 46799


Q ss_pred             EcCCCchhhHHHHHHCC-CeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEc-C-CCCCcCcCCCHHHHHHHHcC---
Q 014492          175 DCPPTFTMYEFDAAVNG-AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLT-S-PNNPDGSIINDEDLLKILEM---  246 (423)
Q Consensus       175 ~~~p~y~~~~~~~~~~g-~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~-~-p~NPtG~~~~~~~l~~i~~~---  246 (423)
                      +.+|+|..+...++..| .++..++.  .++-.+|++.+...++....+.|++. . .+||||.-.+.|++.+|++.   
T Consensus       130 ~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~  209 (410)
T KOG1412|consen  130 VSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKS  209 (410)
T ss_pred             ecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHh
Confidence            99999999999999999 56667773  34557999999999975555555555 3 38999999999999999985   


Q ss_pred             -CCEEEEccCCccccCCCch------hhhhccCCcEEEEccChhhhcccCcccccccc---CHHHHHHH----HHhcC--
Q 014492          247 -PILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSIIEYL----WRAKQ--  310 (423)
Q Consensus       247 -~~~li~Deay~~~~~~~~~------~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~~~~~~l----~~~~~--  310 (423)
                       +.+.+.|-+|.+|+.+...      ...+.....++++.||+|.||+.|-|+|-+..   ++..+..+    ....+  
T Consensus       210 k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~  289 (410)
T KOG1412|consen  210 KNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSN  289 (410)
T ss_pred             cCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhc
Confidence             8999999999999865422      22344556689999999999999999996543   45554433    33322  


Q ss_pred             CCCCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEEEeCCCCCHHHH
Q 014492          311 PYNVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       311 ~~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l  379 (423)
                      ..+++..+...+...|+.+    +|   +..+-.+++++|..|++.|..++    |..+..+.|+|.+-    |.+...+
T Consensus       290 ~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyT----GLtp~qV  365 (410)
T KOG1412|consen  290 WSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYT----GLTPAQV  365 (410)
T ss_pred             cCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeec----CCCHHHH
Confidence            2467777888888999875    34   44566788999999999988763    44566778888876    4456666


Q ss_pred             HHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          380 KDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                      -....+++|++...+        ||+++  .....|.+.++++.
T Consensus       366 ~~li~~h~vyLl~~G--------RInisGLN~~NveyVAkAIde  401 (410)
T KOG1412|consen  366 DHLIENHKVYLLSDG--------RINISGLNMKNVEYVAKAIDE  401 (410)
T ss_pred             HHHHHhceEEEecCC--------cEeeeccccccHHHHHHHHHH
Confidence            555558899998876        89886  34456777777754

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.83  E-value=2.7e-18  Score=152.86  Aligned_cols=309  Identities=19%  Similarity=0.205  Sum_probs=215.1

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           97 IVKIDANENPYGPPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      .+||.+ +.-..|..+++++|.+...+ ..| .|+...+|++.+|+.+| +...+++++|+...+-.++.-+-++|.+|+
T Consensus        23 ~vDLRS-DTvT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~G-KEAgLFv~SGTmgNllaIm~Hc~~rg~eii  100 (384)
T KOG1368|consen   23 SVDLRS-DTVTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFG-KEAGLFVPSGTMGNLLAIMVHCHQRGSEII  100 (384)
T ss_pred             cccccc-ccccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhC-ccceeeecccccccHHHHHHHhcCCCceEE
Confidence            456654 33345568899999886443 456 45677899999999999 455778888887666555555556999999


Q ss_pred             EcCCCch-hhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-------CCceEEEEcCCCCCcC-cCCCHHHHHHH
Q 014492          175 DCPPTFT-MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLTSPNNPDG-SIINDEDLLKI  243 (423)
Q Consensus       175 ~~~p~y~-~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~l~~p~NPtG-~~~~~~~l~~i  243 (423)
                      +.+-+|- .|+  ......|+.+.++..+++..+|++++++++..       +.+++|.+.|-+|-+| .++|++++.++
T Consensus       101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v  180 (384)
T KOG1368|consen  101 VGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRV  180 (384)
T ss_pred             eccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHH
Confidence            9988873 333  34556899999999888889999999999973       2478999998877677 99999988776


Q ss_pred             HcC----CCEEEEccCCcccc---CCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCC----
Q 014492          244 LEM----PILVVLDEAYTEFS---GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP----  311 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~----  311 (423)
                      .++    |+.+.+|.+..+-+   .+-+.-..+...|.+-+|  |||.+|.|   +| .++++++++++....+..    
T Consensus       181 ~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiC--LSKglgAP---VGSViVG~k~FI~kA~~~RKalGGG  255 (384)
T KOG1368|consen  181 KALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSIC--LSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGG  255 (384)
T ss_pred             HHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhh--hhccCCCC---cccEEEccHHHHHHHHHHHHHhcCc
Confidence            553    99999999876432   111222222333444344  78988754   56 566799999887765443    


Q ss_pred             CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEEeCC-CCCHHHHHHHHHhCCc
Q 014492          312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTS-GMDAKKLKDDLAKMGV  388 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI  388 (423)
                      +..+....+|+..+|++. | . ..++-+++...+.+.++..+.+.+  ...+.|++.+.+.. ..+++++++.+.++||
T Consensus       256 mRQsGvLaaaaLval~~~-~-~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi  332 (384)
T KOG1368|consen  256 MRQSGVLAAAALVALDEN-V-P-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGI  332 (384)
T ss_pred             hhHHHHHHHHHHHHhhcc-h-H-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCe
Confidence            334566666666666542 1 2 223334555566667776665543  33678898877643 6789999999999999


Q ss_pred             EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492          389 MIRHYNNKELKGYVRVSVG---KPEHTDALMECL  419 (423)
Q Consensus       389 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  419 (423)
                      .+..+..    ..+||.+-   +.++.|.+...+
T Consensus       333 ~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~  362 (384)
T KOG1368|consen  333 LLMGGAS----RRIRIVLHHQVTDEDVEYVKSVL  362 (384)
T ss_pred             EEeeccc----cceEEEEEEecCHHHHHHHHHHH
Confidence            9998763    45899985   455566666665

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.82  E-value=9.6e-18  Score=164.71  Aligned_cols=318  Identities=15%  Similarity=0.076  Sum_probs=208.4

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCC------CCcc-hH----HHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIY------PDPE-SR----RLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y------~~~g-~~----~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      .+.|.|-.+||-.  +|.+.+++...   .+..+|      +... ..    -..+...+.||.+..+|-.-+|+. ++.
T Consensus        49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~-An~  125 (493)
T PRK13580         49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD-ANL  125 (493)
T ss_pred             hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHH-HHH
Confidence            4458888888876  58888888762   222223      2221 22    244555567898888888888886 555


Q ss_pred             HHHHHhcCC-------------------------------CCeEEEcCCCchhhHH---HHHHCC--CeEEEecCC-CCC
Q 014492          161 LIMRCVLDP-------------------------------GDKIVDCPPTFTMYEF---DAAVNG--AAVVKVPRK-SDF  203 (423)
Q Consensus       161 ~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~~---~~~~~g--~~~~~v~~~-~~~  203 (423)
                      .++.++++|                               ||+|+..++....+..   .....|  .+.+.++.+ ++.
T Consensus       126 ~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g  205 (493)
T PRK13580        126 VAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTG  205 (493)
T ss_pred             HHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccC
Confidence            677778876                               7999987666642211   111122  345555554 356


Q ss_pred             CCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhh-hh-ccCCcEEEEcc
Q 014492          204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME-WV-KKHDNLIVLRT  280 (423)
Q Consensus       204 ~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~-~~-~~~~~~i~i~S  280 (423)
                      .+|++++++.+. .+++.|++++.+|- |...|.+++.+||+. |+++++|++|.....+..... .. ...+..++++|
T Consensus       206 ~iD~d~l~~~~~-~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT  283 (493)
T PRK13580        206 LLDYDEIAALAR-EFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTT  283 (493)
T ss_pred             ccCHHHHHHHHh-hcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeC
Confidence            799999999997 56667777877776 558899999999987 999999999986543221110 00 11234589999


Q ss_pred             ChhhhcccCccccccccCHHHHHHHHHhcCCC---CCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       281 ~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      ++|++  .|-+.|++++++++++.+.+.. ++   +..++...++..++..   +++ .+.++++.++.++|.+.|.+.+
T Consensus       284 ~hKaL--~GP~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef-~~y~~~l~~Na~~La~~L~~~G  359 (493)
T PRK13580        284 THKTL--RGPRGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEF-QKYAQQVVDNARALAEGFLKRG  359 (493)
T ss_pred             Chhhc--cCCCeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHhcC
Confidence            99987  2344599999999998885443 32   2222233333333322   222 5678899999999999999887


Q ss_pred             CCeec-CCCceEEEEEeCCCC-CHHHHHHHHHhCCcEEEeCCC---CCC---CCeEEEEecC-------hhhHHHHHHHH
Q 014492          355 FLNPY-PSYSNFILCEVTSGM-DAKKLKDDLAKMGVMIRHYNN---KEL---KGYVRVSVGK-------PEHTDALMECL  419 (423)
Q Consensus       355 ~~~~~-p~~~~~~~~~~~~~~-~~~~l~~~L~~~gI~v~~~~~---~~~---~~~iRis~~~-------~~~~~~l~~al  419 (423)
                      +-.+. .+.+..+++.+.+.. +...+.+.|.+.||.+.....   +..   ...|||++..       .++++++.+.|
T Consensus       360 ~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l  439 (493)
T PRK13580        360 ARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELI  439 (493)
T ss_pred             CCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHH
Confidence            54332 245678888886322 234566788899999985443   222   5789999754       56677777776


Q ss_pred             hh
Q 014492          420 MH  421 (423)
Q Consensus       420 ~~  421 (423)
                      .+
T Consensus       440 ~~  441 (493)
T PRK13580        440 VK  441 (493)
T ss_pred             HH
Confidence            54

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.82  E-value=1.3e-18  Score=168.95  Aligned_cols=303  Identities=15%  Similarity=0.094  Sum_probs=200.6

Q ss_pred             CCCCCCCHHHHHHHhcCC-----CCC-CC------CC--cchHHHHHHHHHHhCC-CCCcEEEeCC-HHHHHHHHHHHhc
Q 014492          104 ENPYGPPPEVREALGQLK-----FPY-IY------PD--PESRRLRAALAKDSGL-ESDHILVGCG-ADELIDLIMRCVL  167 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~-----~~~-~Y------~~--~g~~~lr~~ia~~~g~-~~~~i~~t~G-~~~al~~~~~~l~  167 (423)
                      ..|...|+.|++++.+.-     .+. .|      +.  .-..+.|+.++++++. ++++|++|+| +|++++.++..++
T Consensus         5 pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~   84 (355)
T cd00611           5 AGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLL   84 (355)
T ss_pred             CCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC
Confidence            345567899999987621     111 11      11  1256899999999997 5678999988 9999999999998


Q ss_pred             C---CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCC-C-HHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          168 D---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-N-VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       168 ~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~-d-~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      .   +||.|+. .|........++..|++++.++.++++.+ + ++..+..+. +++++|.+++..|.||..++     +
T Consensus        85 ~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h~~t~tG~~~~-----~  157 (355)
T cd00611          85 GDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCSNETIHGVEFD-----E  157 (355)
T ss_pred             CCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeCCcccccEEcc-----e
Confidence            7   4454443 33223334467788999988886543222 3 233333344 68999999999999999743     4


Q ss_pred             HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------c-----
Q 014492          243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------K-----  309 (423)
Q Consensus       243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------~-----  309 (423)
                      +++. |+++++|.+++..... -..   ...+  +.+.|..|.+|.+|  +|+++++++.++++...       .     
T Consensus       158 i~~~~g~~~~VDa~qs~g~~~-idv---~~~~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (355)
T cd00611         158 VPDTGGVPLVADMSSNILSRP-IDV---SKFG--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHADN  229 (355)
T ss_pred             ecccCCCeEEEEccccccCCC-CCH---HHhC--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHhc
Confidence            5555 9999999999844321 111   1222  45566799998777  68899988887654321       0     


Q ss_pred             --CCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC--CCc-eEEEEEeCCCCCHHHH
Q 014492          310 --QPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLN-P-YP--SYS-NFILCEVTSGMDAKKL  379 (423)
Q Consensus       310 --~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p--~~~-~~~~~~~~~~~~~~~l  379 (423)
                        ..+++|.....++.++++.  .. .++.+.++.+++.+++++.|++++++. . .+  ... ..+.+.+++.....++
T Consensus       230 ~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~  309 (355)
T cd00611         230 NSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEF  309 (355)
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHH
Confidence              1245666666766666654  22 378889999999999999999995442 1 11  122 3466666521112455


Q ss_pred             HHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhhC
Q 014492          380 KDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHLY  423 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l~  423 (423)
                      .+.+.++|+....+..  ..+.+|+|+.   +.+|+++|.++|++++
T Consensus       310 ~~~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~~  354 (355)
T cd00611         310 LKEAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEFQ  354 (355)
T ss_pred             HHHHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence            5667789997444432  3478999975   6778888888888763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.82  E-value=4.9e-18  Score=168.50  Aligned_cols=248  Identities=17%  Similarity=0.078  Sum_probs=173.8

Q ss_pred             chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh---------cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC
Q 014492          130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK  200 (423)
Q Consensus       130 g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~  200 (423)
                      ...+|++++++++|.+  ++++++|+++++..++.++         ++|||+|+++.++|..+...+...|++++.++.+
T Consensus        64 ~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd  141 (438)
T PRK15407         64 FNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE  141 (438)
T ss_pred             hHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence            3678999999999964  6889999999999988866         4789999999999999999999999999999975


Q ss_pred             -CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEE
Q 014492          201 -SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIV  277 (423)
Q Consensus       201 -~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~  277 (423)
                       .++.+|++.+++.+. +++++|++++   ++|...+.+++.++|+. |++||+|++|+.+. +.+......   + .+.
T Consensus       142 ~~~~~id~~~le~~i~-~~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~---g-d~~  213 (438)
T PRK15407        142 LPTYNIDASLLEAAVS-PKTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTF---G-DIA  213 (438)
T ss_pred             CCcCCcCHHHHHHHcC-cCCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeecc---C-ceE
Confidence             568899999999997 6899999886   46777899999999987 99999999998654 222222222   2 255


Q ss_pred             EccC--hhhhcccCccccccccCH-HHHHHHHHhcCC-----------------------------------------CC
Q 014492          278 LRTF--SKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-----------------------------------------YN  313 (423)
Q Consensus       278 i~S~--SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~-----------------------------------------~~  313 (423)
                      +.||  +|.+. .|- -|+++.++ ++.+++...+..                                         +.
T Consensus       214 ~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~r  291 (438)
T PRK15407        214 TLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLK  291 (438)
T ss_pred             EEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccC
Confidence            6666  46564 343 48888854 444444332110                                         11


Q ss_pred             CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-Cee--cCCCc---eEE-EEEeCC--CCCHHHHHHHHH
Q 014492          314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF-LNP--YPSYS---NFI-LCEVTS--GMDAKKLKDDLA  384 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~--~p~~~---~~~-~~~~~~--~~~~~~l~~~L~  384 (423)
                      ++.+..+.+..-   .+.+++..++-+++.+++.+.|.+++. +..  .+.+.   .|. .+.+++  +.+.+++.+.|.
T Consensus       292 msel~AAig~~q---L~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~  368 (438)
T PRK15407        292 ITDMQAAIGLAQ---LEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLE  368 (438)
T ss_pred             ccHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHH
Confidence            222222322222   244566666667778888888887653 221  12222   222 244432  456899999999


Q ss_pred             hCCcEEEe
Q 014492          385 KMGVMIRH  392 (423)
Q Consensus       385 ~~gI~v~~  392 (423)
                      ++||..+.
T Consensus       369 ~~GI~~~~  376 (438)
T PRK15407        369 ENKIGTRL  376 (438)
T ss_pred             HCCCCccc
Confidence            99998763

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.82  E-value=3.4e-18  Score=157.68  Aligned_cols=340  Identities=16%  Similarity=0.114  Sum_probs=230.4

Q ss_pred             CCCchhHHHHhcccCCCCCCCc---hHHHHHHhCC------C-CCCe-eEcCCCCCCCCCCHHHHHHHhcC-C-CCCCC-
Q 014492           61 LTGDSFIRSHLRKLKPYQPILP---FEVLSIQLGR------K-PEDI-VKIDANENPYGPPPEVREALGQL-K-FPYIY-  126 (423)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~-~~~~-i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-  126 (423)
                      .+++.|+++-+.+-+.-...+.   +..++.++..      . ..++ ++.++.+-.+..+|+|.+|+.+. + ++.+- 
T Consensus       127 F~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAG  206 (570)
T KOG1360|consen  127 FDYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAG  206 (570)
T ss_pred             ccHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcC
Confidence            4677888877755443333332   3333333221      1 1222 34444455667899999999873 2 22111 


Q ss_pred             ------CCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEe
Q 014492          127 ------PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV  197 (423)
Q Consensus       127 ------~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v  197 (423)
                            +.. -..+|++.+|++++ ++..+++++.-. +.+..+..|  .-||-.|....-.|.......+..++.-+.+
T Consensus       207 GTRNIsG~s~~hv~LE~eLA~LHq-K~aALlFsSCfV-ANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IF  284 (570)
T KOG1360|consen  207 GTRNISGHSKHHVRLEAELADLHQ-KEAALLFSSCFV-ANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIF  284 (570)
T ss_pred             CccccCCCCchhhhHHHHHHHHhc-Ccceeeeeeeee-ccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceee
Confidence                  111 13589999999998 344455544332 222222223  2378888888888888888778777766655


Q ss_pred             cCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhc---
Q 014492          198 PRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVK---  270 (423)
Q Consensus       198 ~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~---  270 (423)
                      .     .-|++.|++.+..   ..||+|-..+.+.++|.+-|++||.++++. |.+-++||+|+-..+++......+   
T Consensus       285 r-----HND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdG  359 (570)
T KOG1360|consen  285 R-----HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDG  359 (570)
T ss_pred             c-----cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCC
Confidence            4     3366777776643   568999999999999999999999999998 999999999987665543222111   


Q ss_pred             -cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC----CCcHHHHHHHHHHhCChH--HHHHHHHHHHHHH
Q 014492          271 -KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----NVSVAAEVAACAALQNPI--YLEKVKEALIKER  343 (423)
Q Consensus       271 -~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~----~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~  343 (423)
                       .+...|+.+++.|+||+-|   |||.+...+++.++.+...|    ++++.....+.++++...  .-...++..+++-
T Consensus       360 vm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv  436 (570)
T KOG1360|consen  360 VMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNV  436 (570)
T ss_pred             cchhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence             2344688999999999999   99999999999999887653    466666666665554321  1245566667888


Q ss_pred             HHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCC---CCCCCeEEEEecChhh
Q 014492          344 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNN---KELKGYVRVSVGKPEH  411 (423)
Q Consensus       344 ~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~---~~~~~~iRis~~~~~~  411 (423)
                      .++++.|.+++ +.+.|..+.++-+++.+..-+.++++.|. ++||+|-....   ..+...+||+.+....
T Consensus       437 ~~~kq~l~~~G-iPVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT  507 (570)
T KOG1360|consen  437 KYVKQLLMELG-IPVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHT  507 (570)
T ss_pred             HHHHHHHHHcC-CcccCCCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCC
Confidence            89999999887 45566677788888865556778888887 89999986554   5667789999875443

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.82  E-value=2.8e-18  Score=152.41  Aligned_cols=312  Identities=18%  Similarity=0.174  Sum_probs=210.7

Q ss_pred             CCeeEcCCC-CCCCCCCHHHHHHHhcC--CCCCC-----C--CCcc-hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDAN-ENPYGPPPEVREALGQL--KFPYI-----Y--PDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~-~~~~~~~~~v~~al~~~--~~~~~-----Y--~~~g-~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..+++|+.| +-.+..+|++.++-.++  .++.+     +  +... ...|+..||++.+- .|.| +.+..-.+...++
T Consensus        67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~r-ED~i-lypscfdANag~f  144 (417)
T KOG1359|consen   67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGR-EDTI-LYPSCFDANAGAF  144 (417)
T ss_pred             cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCC-CceE-EeccccccchHHH
Confidence            567888765 44567789998776652  12211     1  1112 35799999999983 3444 4555556777788


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      .+++.|.|.|+.....|.......+.+.         .-..+|+-.++..+.   +.+.|+|+......+.|.+.|.+++
T Consensus       145 eail~pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei  215 (417)
T KOG1359|consen  145 EAILTPEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI  215 (417)
T ss_pred             HHhcChhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence            8899999999999888987776655543         112456666665443   2567888877999999999999999


Q ss_pred             HHHHcC-CCEEEEccCCccccCCCch---hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC---
Q 014492          241 LKILEM-PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---  312 (423)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~---  312 (423)
                      .+|++. |.++++||+|.-+.++...   ...+ ...+..++.++++|++|  |.--||..+|+.+++-++...++|   
T Consensus       216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~RpylFS  293 (417)
T KOG1359|consen  216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRPYLFS  293 (417)
T ss_pred             HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCceeec
Confidence            999998 9999999999876543322   1122 23566788899999986  333499999999999999888874   


Q ss_pred             -CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014492          313 -NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIR  391 (423)
Q Consensus       313 -~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~  391 (423)
                       ++++.....+..++.-.-.-.+...+.+.+.+++++..+..++ .+.........+-+.+..-+..+.++|++.||.|-
T Consensus       294 nslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aGf-tIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vi  372 (417)
T KOG1359|consen  294 NSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAGF-TISGASHPICPVMLGDARLASKMADELLKRGIYVI  372 (417)
T ss_pred             CCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCc-eecCCCCCccceecccHHHHHHHHHHHHhcCceEE
Confidence             3443322223333321111234445556677778887776664 33333345555666544557788899999999998


Q ss_pred             eCCC---CCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          392 HYNN---KELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       392 ~~~~---~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      .+++   +.+...||+.++   ++++++++.+++.
T Consensus       373 gfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~  407 (417)
T KOG1359|consen  373 GFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFS  407 (417)
T ss_pred             eecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHH
Confidence            8777   556678999887   4555666666654

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.82  E-value=4.1e-18  Score=166.80  Aligned_cols=300  Identities=12%  Similarity=0.067  Sum_probs=202.2

Q ss_pred             CCCCCCHH-HHHHHhcCCC--CCCCCCc--chHHHHHHHHHHhCCC-CCcEEEeC-CHHHHHHHHHHHhcCC-CCeEEEc
Q 014492          105 NPYGPPPE-VREALGQLKF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGC-GADELIDLIMRCVLDP-GDKIVDC  176 (423)
Q Consensus       105 ~~~~~~~~-v~~al~~~~~--~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~t~-G~~~al~~~~~~l~~~-gd~Vl~~  176 (423)
                      .+...+|. |++++.....  .++-+..  -..+.|+.++++++.+ +++|++++ |++.+++.++..++++ ++.|+. 
T Consensus        19 Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-   97 (378)
T PRK03080         19 GPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-   97 (378)
T ss_pred             CCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-
Confidence            34555677 8899876321  2333332  2678999999999984 45788875 8999999999999875 444444 


Q ss_pred             CCCchh-hHH-HHHHCCC-eEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEc
Q 014492          177 PPTFTM-YEF-DAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLD  253 (423)
Q Consensus       177 ~p~y~~-~~~-~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~D  253 (423)
                      .-.|+. +.. .++..|+ +++.++.+.+..+|+++++      .++.|.+++..|.||..+|.+++.+ .+.|+++++|
T Consensus        98 ~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~------~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVD  170 (378)
T PRK03080         98 WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVD------FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICD  170 (378)
T ss_pred             eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcC------CCCCEEEEecCCccceeccchhhcc-ccCCCeEEEe
Confidence            456653 222 2356788 8888887666678877632      2567889999999999999999888 3349999999


Q ss_pred             cCCccccCCCchhhhhccCCcEEEEccChhhhcc-cCccccccccCHHHHHHHHHhc----------------------C
Q 014492          254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAK----------------------Q  310 (423)
Q Consensus       254 eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~i~~~~~~~~~l~~~~----------------------~  310 (423)
                      .+++.....-. ...     -.+++.|..|.++. +|  +|+++.+++.++++....                      .
T Consensus       171 a~qs~G~~pid-v~~-----iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  242 (378)
T PRK03080        171 ATSAAFALPLD-WSK-----LDVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFK  242 (378)
T ss_pred             cccccccCCCC-HHH-----CcEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhc
Confidence            99885442111 111     24888999998753 45  799999988887655311                      0


Q ss_pred             ---CCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeec---CC--CceEEEEEeCC---CCCH
Q 014492          311 ---PYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPY---PS--YSNFILCEVTS---GMDA  376 (423)
Q Consensus       311 ---~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~--~~~~~~~~~~~---~~~~  376 (423)
                         +++++..+..++.++|+.  .. .++.+.++.+++.+++++.|++++++.+.   +.  .+..+.+.+++   +. .
T Consensus       243 ~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~-~  321 (378)
T PRK03080        243 GQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAV-D  321 (378)
T ss_pred             CCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHH-H
Confidence               122344444444444443  12 36788889999999999999988865443   21  22356667764   22 3


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .++...|.++||.++.+......+.+|||+.   +.++.+.+.++|+.
T Consensus       322 ~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~  369 (378)
T PRK03080        322 AAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDW  369 (378)
T ss_pred             HHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence            3466777777998887553223578999975   56677777777765

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.82  E-value=4.6e-17  Score=145.97  Aligned_cols=308  Identities=14%  Similarity=0.069  Sum_probs=223.4

Q ss_pred             CCCCHHHHHHHhcCCCCCCCCCc-c-hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcC-CCch-
Q 014492          107 YGPPPEVREALGQLKFPYIYPDP-E-SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFT-  181 (423)
Q Consensus       107 ~~~~~~v~~al~~~~~~~~Y~~~-g-~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-p~y~-  181 (423)
                      ...++.|.+|+..-..++..|+. . ..++++-+...|... +.-.++...++.+++.++..+++|||.|++.. -.|. 
T Consensus        26 snl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~  105 (385)
T KOG2862|consen   26 SNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQ  105 (385)
T ss_pred             cCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHH
Confidence            33467888888875444555553 2 567888888888653 34556666677899999999999999988654 4554 


Q ss_pred             hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC-HHHHHHHHcC-CCEEEEccCCccc
Q 014492          182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEF  259 (423)
Q Consensus       182 ~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~-~~~li~Deay~~~  259 (423)
                      .+..+++.+|++|..|+.+.+....++.+.+.+.+++++++++++....||+..+ .+.+.++|+. ++++++|.+-+-.
T Consensus       106 ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlg  185 (385)
T KOG2862|consen  106 RAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLG  185 (385)
T ss_pred             HHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcC
Confidence            6677889999999999988888999999999999899999999999999999999 7778889988 9999999987633


Q ss_pred             cCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--------------C-----------CCC
Q 014492          260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------P-----------YNV  314 (423)
Q Consensus       260 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------~-----------~~~  314 (423)
                      ...    ...+.++..+....--|++|.| -.++.+.+++...++++..+.              +           .++
T Consensus       186 gt~----F~mDewgVDvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~  260 (385)
T KOG2862|consen  186 GTE----FEMDEWGVDVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTP  260 (385)
T ss_pred             Ccc----ceehhhcccEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCC
Confidence            211    1123444455555557998754 224557778888887775443              1           245


Q ss_pred             cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe--e--cCCCceEEEEEeCCCCCHHHHHHHHHhC-C
Q 014492          315 SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN--P--YPSYSNFILCEVTSGMDAKKLKDDLAKM-G  387 (423)
Q Consensus       315 ~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~--~p~~~~~~~~~~~~~~~~~~l~~~L~~~-g  387 (423)
                      +....+.+.++|..  ++.+++..++.+++.+++...|++++.-.  +  .+.--.--.+.+|.+.|-.++..++.++ +
T Consensus       261 pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~  340 (385)
T KOG2862|consen  261 PVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYV  340 (385)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcC
Confidence            66677777777765  57789999999999999999999876322  1  1112223457888899999999999966 5


Q ss_pred             cEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHH
Q 014492          388 VMIRHYNNKELKGYVRVSVG-KPEHTDALMECL  419 (423)
Q Consensus       388 I~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al  419 (423)
                      +.+..+-.+..+..+||.+. .....+.++..+
T Consensus       341 vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~  373 (385)
T KOG2862|consen  341 VEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVV  373 (385)
T ss_pred             EEeccccCCCcccEEEEEEeeccCCcHHHHHHH
Confidence            55544444667789999863 333334444433

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.82  E-value=9.5e-18  Score=167.76  Aligned_cols=325  Identities=16%  Similarity=0.109  Sum_probs=189.2

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-C----CCCCcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-Y----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-~----~Y~~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~  160 (423)
                      +.+++.+||+..+.  ..+| .+|.+.+++.+ +... +    .+..+...++-+.+++..+-.. +.++++++++++++
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e  129 (451)
T PRK06918         50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVE  129 (451)
T ss_pred             eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHH
Confidence            45678899997773  3343 46888888876 2211 1    1223334567777777765322 58999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCCC----CCCC--------HHHHHH
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSD----FSLN--------VELIAD  212 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~----~~~d--------~~~l~~  212 (423)
                      .+++...  ....+|+....+|++....+... |.             .+..+|..+.    .+..        ++.+++
T Consensus       130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (451)
T PRK06918        130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN  209 (451)
T ss_pred             HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence            9988432  22357888888887554433221 11             1223332110    1111        123333


Q ss_pred             Hh----hcCCceEEEEcCCCCCcCcCCC-HHHHHHHHc---C-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccC
Q 014492          213 AV----EREKPKCIFLTSPNNPDGSIIN-DEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF  281 (423)
Q Consensus       213 ~i----~~~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~  281 (423)
                      .+    ...++.+|++...+.-.|.+++ .+.+++|.+   . |+++|+||+|.+|...+...  ...+..+.   +.|+
T Consensus       210 ~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD---i~t~  286 (451)
T PRK06918        210 FFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD---LITV  286 (451)
T ss_pred             HHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC---EEee
Confidence            32    2245667776644444576554 443555544   4 99999999999886544322  22222222   4489


Q ss_pred             hhhhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCC
Q 014492          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPF  355 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~  355 (423)
                      ||.++ +|+|+||+++++++++.+....  ..++.+++++.++.++|+..+ -....++.++..+++.+.|+    +.+.
T Consensus       287 sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~-~~~~~~~~~~~g~~l~~~l~~l~~~~~~  364 (451)
T PRK06918        287 SKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIE-KENLNDRAIELGKVVMNRFEEMKNKYNC  364 (451)
T ss_pred             ehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99998 9999999999999988775433  347789999999777775210 01122223333333333333    3443


Q ss_pred             Ce-ecCCCceEEEEEeCC-------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          356 LN-PYPSYSNFILCEVTS-------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       356 ~~-~~p~~~~~~~~~~~~-------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +. +.+.++++.|....+       ......+.+.+.++||.+.+++.+  .+++||+++...+.+++.+++++|
T Consensus       365 ~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l  437 (451)
T PRK06918        365 IGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTII  437 (451)
T ss_pred             ceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence            22 334444444433211       112456677778999999986533  378999986522335666666554

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.81  E-value=2.9e-17  Score=162.56  Aligned_cols=326  Identities=16%  Similarity=0.119  Sum_probs=199.0

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C---C-CCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P---Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~---~-~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      +.+++.++|+..+.  ..++ .+|++.+++.+ +.. .   . .++.+...++-+.+++..+-. .+.++++++++++++
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e  115 (425)
T PRK07495         36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVE  115 (425)
T ss_pred             eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            45678899998763  2344 46888888876 221 1   1 234444566777777776532 268999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC-------------CeEEEecCCC-CCCCC----HHHHHHHhh----
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS-DFSLN----VELIADAVE----  215 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~-~~~~d----~~~l~~~i~----  215 (423)
                      .+++...  ....+|+....+|++....+.. .|             ..++.+|.+. ..+.+    ++.+++.+.    
T Consensus       116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~  195 (425)
T PRK07495        116 NAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD  195 (425)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccC
Confidence            9988432  2236788888888755433211 11             1223344221 11222    445566653    


Q ss_pred             cCCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCc
Q 014492          216 REKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (423)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~  290 (423)
                      ..++.+|++...+.-+|. +.|.+.+++|.+   . |+++|+||+|..|...+.. ......+....+.++||.++ +|+
T Consensus       196 ~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~gv~pDi~tlsK~l~-~G~  273 (425)
T PRK07495        196 PQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHHEVAADLTTMAKGLA-GGF  273 (425)
T ss_pred             CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecccCCCCCEEeehhhhc-CCc
Confidence            246888888844433884 467766666654   3 9999999999987544332 11222344456788999998 899


Q ss_pred             cccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCeecCCCce
Q 014492          291 RVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLNPYPSYSN  364 (423)
Q Consensus       291 R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~~  364 (423)
                      |+|++++++++.+.+...  ...|+.+++++.++.++++.-+ -....++.+++.+++.+.|+    +.+.+.-....|.
T Consensus       274 pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl  352 (425)
T PRK07495        274 PLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIE-EEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGF  352 (425)
T ss_pred             cceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCce
Confidence            999999999998876542  2346788999887776664311 01233344444444444443    3443332335689


Q ss_pred             EEEEEeCCCC----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          365 FILCEVTSGM----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       365 ~~~~~~~~~~----~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      ++|+++.+..    +   ...+.+.+.++|+++...+.  ..+.+||.....-+.++++++++.
T Consensus       353 ~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~~  414 (425)
T PRK07495        353 MNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALDI  414 (425)
T ss_pred             EEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHH
Confidence            9999885321    1   34577778899999976432  147899996532223444444443

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.81  E-value=2e-17  Score=164.41  Aligned_cols=324  Identities=15%  Similarity=0.190  Sum_probs=199.5

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++.++|+..+  ...++ .+|++.+++.+ +..   ..  .|+.+...+|.+.+++..+-..+.++++++++++++.
T Consensus        38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~  117 (423)
T PRK05964         38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEV  117 (423)
T ss_pred             eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            3457789999776  34444 36888888876 221   11  2444445567788887764334689999999999999


Q ss_pred             HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC--CCCHHHHHHHhhc--
Q 014492          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF--SLNVELIADAVER--  216 (423)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~--~~d~~~l~~~i~~--  216 (423)
                      +++....       +| .+|+...-+|++....+.. .+-            .+..++.+.+.  ..+++.+++.+.+  
T Consensus       118 A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~  197 (423)
T PRK05964        118 ALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA  197 (423)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC
Confidence            9884421       23 5788888888754433322 111            12233322110  1127888888852  


Q ss_pred             CCceEEEEcC-CCCCcCcCC-CHHHHHH---HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCc
Q 014492          217 EKPKCIFLTS-PNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL  290 (423)
Q Consensus       217 ~~~~~i~l~~-p~NPtG~~~-~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~  290 (423)
                      .++.+|++.. .++..|... +.+.+++   +|+. |+++|+||+|.++...+..... ...+...-+.+++|.++.+++
T Consensus       198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-~~~~v~pDi~~~~K~l~gG~~  276 (423)
T PRK05964        198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-EQAGVSPDIMCLSKGLTGGYL  276 (423)
T ss_pred             CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH-HhcCCCCCeeeeehhhhcCcc
Confidence            4567888775 577788766 5555555   4554 9999999999877543322111 111111223467899974448


Q ss_pred             cccccccCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec
Q 014492          291 RVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY  359 (423)
Q Consensus       291 R~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  359 (423)
                      ++|++++++++.+.+...        ...|+.++++..++.++|+.   +++.++..+..+..++.|.+ +.+.+.+.-.
T Consensus       277 p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~-l~~~~~i~~v  355 (423)
T PRK05964        277 PLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEP-FRDLPGVADV  355 (423)
T ss_pred             cceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-hccCCCeEEe
Confidence            999999999999887531        12356788888888777762   34444444444444444432 2233433323


Q ss_pred             CCCceEEEEEeCCCC---CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          360 PSYSNFILCEVTSGM---DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       360 p~~~~~~~~~~~~~~---~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ...|.++.+.+.+..   ....+.+.|.++||++.+..     +.+||+..   +.++++++.+++++
T Consensus       356 rg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~~-----~~lR~~p~l~~t~edId~~v~~l~~  418 (423)
T PRK05964        356 RVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPLG-----NTIYLMPPYIITAEELDRITDAIVE  418 (423)
T ss_pred             ecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHHHHHHHHHHHH
Confidence            456777778875322   25678888999999998743     57999965   45555555555543

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.80  E-value=1.8e-17  Score=160.71  Aligned_cols=280  Identities=22%  Similarity=0.256  Sum_probs=187.8

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~  200 (423)
                      ++.+|....|++.+++..|.  +.++++++++.|+..++.+++++||+|++....|......+    ...|+++..++. 
T Consensus        51 R~gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-  127 (386)
T PF01053_consen   51 RYGNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-  127 (386)
T ss_dssp             TTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred             ccccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence            44566678899999999984  67888999999999999999999999999999997555444    447999999863 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C-CEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                          -|+++++++++ +++++|++.+|.||+..+.+++.+.++++. | +++++|..+...... .++    ..+.++++
T Consensus       128 ----~d~~~l~~~l~-~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-~pL----~~GaDivv  197 (386)
T PF01053_consen  128 ----TDLEALEAALR-PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-NPL----ELGADIVV  197 (386)
T ss_dssp             ----TSHHHHHHHHC-TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--GG----GGT-SEEE
T ss_pred             ----hhHHHHHhhcc-ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-ccC----cCCceEEE
Confidence                47899999997 699999999999999999999999999997 7 999999999744321 122    22345999


Q ss_pred             ccChhhhcccC-ccccccccC--HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492          279 RTFSKRAGLAG-LRVGYGAFP--LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV  353 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~--~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~  353 (423)
                      .|.+|.++-.| .=.|.++.+  +++.++++.....  ..+++.....+..-++   .+..+.++..++...+.+.|++.
T Consensus       198 ~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~---Tl~~R~~~~~~nA~~lA~~L~~h  274 (386)
T PF01053_consen  198 HSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLR---TLPLRMERQNENAEALAEFLEEH  274 (386)
T ss_dssp             EETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTS
T ss_pred             eeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCC---cHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999775333 225777764  4777776655433  2445555554444443   35667777788999999999998


Q ss_pred             CCCe-e-cC----------------CCceEEEEEeCCCC-CHHHHHHHHHh--CCcEE--------EeCCC---------
Q 014492          354 PFLN-P-YP----------------SYSNFILCEVTSGM-DAKKLKDDLAK--MGVMI--------RHYNN---------  395 (423)
Q Consensus       354 ~~~~-~-~p----------------~~~~~~~~~~~~~~-~~~~l~~~L~~--~gI~v--------~~~~~---------  395 (423)
                      +.+. + +|                +.|..+.+++.++. ....|++.|.-  .+..+        .|...         
T Consensus       275 p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~  354 (386)
T PF01053_consen  275 PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEE  354 (386)
T ss_dssp             TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHH
T ss_pred             CCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhh
Confidence            7654 2 44                33457788887443 34556666531  11111        11110         


Q ss_pred             ----CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          396 ----KELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       396 ----~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                          .-.++.||||++.++ .++|.+-|++
T Consensus       355 ~~~~Gi~~~liRlSvGlEd-~~dLi~Dl~~  383 (386)
T PF01053_consen  355 RAEAGISDGLIRLSVGLED-PDDLIADLEQ  383 (386)
T ss_dssp             HHHTTS-TTEEEEE--SS--HHHHHHHHHH
T ss_pred             hhccCCCCCeeEEEeccCC-HHHHHHHHHH
Confidence                112468999999866 4777666653

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.80  E-value=5.7e-18  Score=153.60  Aligned_cols=329  Identities=17%  Similarity=0.232  Sum_probs=228.3

Q ss_pred             CchHHHHHHhCCCC-CCeeEcCCCCC--CCCC---CHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh-C-----C
Q 014492           81 LPFEVLSIQLGRKP-EDIVKIDANEN--PYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G-----L  144 (423)
Q Consensus        81 ~~~~~~~~~~~~~~-~~~i~l~~~~~--~~~~---~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~-g-----~  144 (423)
                      +++..+.+.+.+++ ..-|+|+.|..  +.+.   .|.|++|-.++   .....| |-.|..++.+..+++. |     +
T Consensus        37 DpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~i  116 (427)
T KOG1411|consen   37 DPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVI  116 (427)
T ss_pred             CCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhh
Confidence            34444556665543 33467776632  1222   36777776652   223567 8889999999999874 4     2


Q ss_pred             CCCcEEE--eCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEec--CCCCCCCCHHHHHHHhhcCC
Q 014492          145 ESDHILV--GCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREK  218 (423)
Q Consensus       145 ~~~~i~~--t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~~~  218 (423)
                      ..++|+.  |-+++.++.+...-+  .-++..|.++.|+|.......+.+|..+..+.  .....++|.+.+.+.+.+..
T Consensus       117 k~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p  196 (427)
T KOG1411|consen  117 KEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAP  196 (427)
T ss_pred             hccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCC
Confidence            3344442  334445554444322  34678899999999999999999999987776  33456899999888886544


Q ss_pred             ceEEEEcC--CCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc------hhhhhccCCcEEEEccChhhhc
Q 014492          219 PKCIFLTS--PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES------RMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       219 ~~~i~l~~--p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~------~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      ...+++++  .|||||+--+.+++++|.+.    +.+-+.|-+|..|..+..      ....+.+..+++++.|++|.+|
T Consensus       197 ~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMG  276 (427)
T KOG1411|consen  197 EGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMG  276 (427)
T ss_pred             CCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcc
Confidence            55566664  48999999999999999885    899999999999985431      2334556788999999999999


Q ss_pred             ccCcccccccc---CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHH
Q 014492          287 LAGLRVGYGAF---PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLL  350 (423)
Q Consensus       287 ~~G~R~G~i~~---~~~~~~----~l~~~~~~--~~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L  350 (423)
                      +.|.|+|.+-.   +.+...    ++....++  .+++..+...+...|.++    +|   +..+..++...|+.|.+.|
T Consensus       277 LYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L  356 (427)
T KOG1411|consen  277 LYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDAL  356 (427)
T ss_pred             hhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHh
Confidence            99999997533   444333    33444444  356666777788888884    45   4456788889999999999


Q ss_pred             ccCC----CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          351 KDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       351 ~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                      +..+    |-.+..+-|+|.+-.+    +.+++-....++.|++..-+        |||++  +....++|.+++..
T Consensus       357 ~~~gs~~~W~hI~~QIGMF~fTgl----~peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~aih~  421 (427)
T KOG1411|consen  357 EKEGSPGNWSHITKQIGMFCFTGL----NPEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAIHA  421 (427)
T ss_pred             hcCCCCccHHHHHHhhheeeecCC----CHHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhhHh
Confidence            7643    3345678899988755    45555444458999998766        99986  34446778877765

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.80  E-value=1e-17  Score=162.43  Aligned_cols=302  Identities=15%  Similarity=0.084  Sum_probs=207.2

Q ss_pred             CCCCCCHHHHHHHhcC--CC----------CCCCCCc--chHHHHHHHHHHhCCC-CCcEE-EeCCHHHHHHHHHHHhcC
Q 014492          105 NPYGPPPEVREALGQL--KF----------PYIYPDP--ESRRLRAALAKDSGLE-SDHIL-VGCGADELIDLIMRCVLD  168 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~--~~----------~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~-~t~G~~~al~~~~~~l~~  168 (423)
                      .|...+++|++|+...  +.          +++-+..  -..++++.++++++.+ ..+|+ ++++++.+++.++..++.
T Consensus        10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~   89 (360)
T PRK05355         10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG   89 (360)
T ss_pred             CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC
Confidence            4555678999998752  11          1221221  2568899999999973 33454 557788889999999999


Q ss_pred             CCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCC-CCCCCHHHHHH-HhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          169 PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       169 ~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                      +|+++++..-+..  .+...++.+|.. ..+..+. ....+..++++ .++ .++++|.+++..+.||+..+  .+.+| 
T Consensus        90 ~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-~~~~~V~~th~eTstGv~~~--~i~~i-  164 (360)
T PRK05355         90 GGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-DDAAYVHYTSNETIDGTEFH--ELPDT-  164 (360)
T ss_pred             CCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC-CCCCEEEEccCCCcceEecC--ccccc-
Confidence            9988776554443  455677888865 5555432 22344444444 665 58999999999999999984  23333 


Q ss_pred             cCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--------------cC
Q 014492          245 EMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--------------KQ  310 (423)
Q Consensus       245 ~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--------------~~  310 (423)
                       .|+++|+|.+.+-.... -..   +..+  +++.|..|.+|.+|  +|+++.+++.++++...              ..
T Consensus       165 -~g~l~vVDavss~g~~~-idv---~~~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~  235 (360)
T PRK05355        165 -GDVPLVADMSSDILSRP-IDV---SKFG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDSM  235 (360)
T ss_pred             -CCCcEEEEcCccccCcc-CCH---HHcc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCCc
Confidence             69999999998844321 111   2233  78888899998777  68899888887765431              12


Q ss_pred             CCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeec-C--CCc-eEEEEEeCCCCCHHHHHHHH
Q 014492          311 PYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPY-P--SYS-NFILCEVTSGMDAKKLKDDL  383 (423)
Q Consensus       311 ~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p--~~~-~~~~~~~~~~~~~~~l~~~L  383 (423)
                      ++++|.....++.++|+.  .+ .++.+.++.++..+++++.|+++++.... +  ... ..+.+.++++.+..++.+.+
T Consensus       236 ~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~  315 (360)
T PRK05355        236 YNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEA  315 (360)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHH
Confidence            356777777777777764  23 47889999999999999999998854321 1  122 44667777554446677788


Q ss_pred             HhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          384 AKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .++|+.+..+..  ..+.+|+|+.   +.+|++.|.++|+++
T Consensus       316 ~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~  355 (360)
T PRK05355        316 KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEF  355 (360)
T ss_pred             HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHH
Confidence            889999854432  3578999975   577788888888764

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.79  E-value=3.7e-17  Score=161.61  Aligned_cols=215  Identities=14%  Similarity=0.098  Sum_probs=153.3

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~  202 (423)
                      ..+....+++.++++.|. .+.|++++|+ .++.+++.+++++||+|+++...|....    ..++..|++++.++ +. 
T Consensus        67 ~~pt~~~le~~la~l~g~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~-  142 (437)
T PRK05613         67 TNPTVEALENRIASLEGG-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NP-  142 (437)
T ss_pred             cChHHHHHHHHHHHHhCC-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CC-
Confidence            345578899999999996 3566666666 7777888888999999999999997553    34466899999997 22 


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                        .|+++++++++ +++++|++.++.||+|.+.+.+++.++|+. |+++|+|.+++..... ...    ..+..+++.|+
T Consensus       143 --~d~e~l~~~l~-~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~-~p~----~~GaDivv~S~  214 (437)
T PRK05613        143 --DDPESWQAAVQ-PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV-RPL----ELGADVVVASL  214 (437)
T ss_pred             --CCHHHHHHhCC-ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc-ChH----HhCCCEEEeec
Confidence              27999999997 689999999999999999999999999997 9999999998643221 111    22346999999


Q ss_pred             hhhhcccCcccc-ccccCHHH-----------------------------------HH-HHHHh--cCCCCCcHHHHHHH
Q 014492          282 SKRAGLAGLRVG-YGAFPLSI-----------------------------------IE-YLWRA--KQPYNVSVAAEVAA  322 (423)
Q Consensus       282 SK~~g~~G~R~G-~i~~~~~~-----------------------------------~~-~l~~~--~~~~~~~~~~~~a~  322 (423)
                      +|.++..|--+| .++.+.++                                   .. .....  .....+++.....+
T Consensus       215 ~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~  294 (437)
T PRK05613        215 TKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVT  294 (437)
T ss_pred             cceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence            998775554444 34432210                                   00 00011  11234555555444


Q ss_pred             HHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492          323 CAALQNPIYLEKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       323 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                      ..-|   +.+..+.++..++..++.+.|++.+.+
T Consensus       295 ~rgl---~TL~lR~~~~~~nA~~lA~~L~~hp~V  325 (437)
T PRK05613        295 AQGL---DTLSLRLERHNENAIKVAEFLNNHEKV  325 (437)
T ss_pred             Hccc---CcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            4333   446667777788999999999987754

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.79  E-value=9.4e-17  Score=153.84  Aligned_cols=279  Identities=21%  Similarity=0.203  Sum_probs=192.5

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~  200 (423)
                      ++.+|....|+++++.+-|  .++.+.++++..|+..++..++++||+|++....|....    ...+.+|+++..++. 
T Consensus        59 R~~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~-  135 (396)
T COG0626          59 RTGNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP-  135 (396)
T ss_pred             cCCCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC-
Confidence            3456777899999999986  467788888889999999999999999999999886433    444568999998873 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          .|.+++++++.++++|+|++.+|.||+-.+.++.++.++++. |+++|+|..|....+.. ++    ..+..|++.
T Consensus       136 ----~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-PL----~~GaDIVvh  206 (396)
T COG0626         136 ----GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR-PL----ELGADIVVH  206 (396)
T ss_pred             ----CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC-hh----hcCCCEEEE
Confidence                244566766654689999999999999999999999999998 89999999998544321 11    234569999


Q ss_pred             cChhhhcccC-ccccccccCHH-HHHHHHHhcC---CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          280 TFSKRAGLAG-LRVGYGAFPLS-IIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~~~-~~~~l~~~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      |.+|-++--+ +=.|.++++.+ +.+.+.....   ...+++.....+..-+   +.+..+.++..++...+.+.|++.+
T Consensus       207 SaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGl---kTL~~Rm~~~~~nA~~IA~~L~~~p  283 (396)
T COG0626         207 SATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGL---RTLALRMERHNENALKIAEFLADHP  283 (396)
T ss_pred             eccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999876322 22466665554 4444422222   2345666555444443   4466777778889999999999877


Q ss_pred             CCe--ecCC----------------CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------------------
Q 014492          355 FLN--PYPS----------------YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN---------------------  395 (423)
Q Consensus       355 ~~~--~~p~----------------~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~---------------------  395 (423)
                      .+.  .+|+                .|..+.+++.++.+..+|.+.|.--.+..+-|+.                     
T Consensus       284 ~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~  363 (396)
T COG0626         284 KVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERA  363 (396)
T ss_pred             CeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHH
Confidence            654  2453                5666778886443345556655422222221111                     


Q ss_pred             --CCCCCeEEEEecChhhHHHHHHHH
Q 014492          396 --KELKGYVRVSVGKPEHTDALMECL  419 (423)
Q Consensus       396 --~~~~~~iRis~~~~~~~~~l~~al  419 (423)
                        .-.++.||+|++.++ .++|.+-|
T Consensus       364 ~~Gi~~~LvRlSVGlEd-~eDLi~Dl  388 (396)
T COG0626         364 KAGITDGLVRLSVGLED-VEDLIADL  388 (396)
T ss_pred             hcCCCCCeEEEEecCCC-HHHHHHHH
Confidence              112578999999755 35554443

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.79  E-value=1.7e-16  Score=158.34  Aligned_cols=325  Identities=14%  Similarity=0.111  Sum_probs=195.0

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCCC--C---CCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~--~---Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      +.+++.+||+..+.  ..++ .+|++.+++.+ +....  .   ++.....++-+.+++.++.. .+.++++++++++++
T Consensus        52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  131 (443)
T PRK06058         52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVE  131 (443)
T ss_pred             eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence            45678899998763  3344 46888888876 22111  1   12223456777777766432 257889999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCCCCC------C--------CHHHH
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS------L--------NVELI  210 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~~~~------~--------d~~~l  210 (423)
                      .+++...  ...++|+...++|++....+... +.             .+..+|....+.      .        .++.+
T Consensus       132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  211 (443)
T PRK06058        132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI  211 (443)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence            9988321  22378999999998766443321 10             122222111111      1        12334


Q ss_pred             HHHhhcCCceEEEEcCCCCCcCcCCC-H---HHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChh
Q 014492          211 ADAVEREKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK  283 (423)
Q Consensus       211 ~~~i~~~~~~~i~l~~p~NPtG~~~~-~---~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK  283 (423)
                      ++.+..+++.+|++...+.-.|.+.+ .   +++.++|+. |+++|.||++..|...+...  ...+..+.++   +++|
T Consensus       212 ~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv---~~gK  288 (443)
T PRK06058        212 EKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI---TTAK  288 (443)
T ss_pred             HHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE---EEcc
Confidence            44443356778876544443455543 3   455556665 99999999999886433221  1222233333   3479


Q ss_pred             hhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCe
Q 014492          284 RAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLN  357 (423)
Q Consensus       284 ~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~  357 (423)
                      .+| .|+++|++++++++++.+....  ..|+.+++++.++.++|+.-+ -+...++.+++.+++.+.|++    .+.+.
T Consensus       289 ~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~-~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~  366 (443)
T PRK06058        289 GIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIE-EDDLVARARQIEALMTDRLRALAAEDDRIG  366 (443)
T ss_pred             ccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence            998 8999999999999888775332  347789999999998886411 123455555666666666654    34332


Q ss_pred             ecCCCceEEEEEeCCC---C----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          358 PYPSYSNFILCEVTSG---M----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       358 ~~p~~~~~~~~~~~~~---~----~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      -..+.|.++.+.+.+.   .    -...+.+.+.++||++.+++..  .++||+......+.++++++++++
T Consensus       367 ~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l  436 (443)
T PRK06058        367 DVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVL  436 (443)
T ss_pred             eeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence            2345667766666321   1    1345677778999999875432  368999865333334555555443

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.79  E-value=1.7e-16  Score=157.19  Aligned_cols=319  Identities=13%  Similarity=0.135  Sum_probs=202.5

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-C---CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +.+++.++|+..+  ...++ .+|+|.+|+.+ +   .....| ..+...++-+.+++...-..+.++++++++||++.+
T Consensus        71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~A  150 (442)
T TIGR03372        71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAA  150 (442)
T ss_pred             ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence            4567889999877  45554 46888888876 2   222222 344456777888777653346899999999999999


Q ss_pred             HHHhcC----CC-CeEEEcCCCchhhHHHHHHC-CCe------------EEEecCCCCCCCCHHHHHHHhhc-----CCc
Q 014492          163 MRCVLD----PG-DKIVDCPPTFTMYEFDAAVN-GAA------------VVKVPRKSDFSLNVELIADAVER-----EKP  219 (423)
Q Consensus       163 ~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~-g~~------------~~~v~~~~~~~~d~~~l~~~i~~-----~~~  219 (423)
                      ++....    .| ..|+....+|++....+... +-.            +..+|     ..|.+.+++.++.     .++
T Consensus       151 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p-----~~d~~~~~~~l~~~~~~~~~v  225 (442)
T TIGR03372       151 LKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVA-----FGDIEAMLKALNECKKTGDDV  225 (442)
T ss_pred             HHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeC-----CCCHHHHHHHHHHHhcCCCcE
Confidence            884321    23 57888888887554333222 211            12222     1256777776642     457


Q ss_pred             eEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-cc
Q 014492          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR  291 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R  291 (423)
                      .+|++...+...|.+.+    .+++.++|+. |+++|+||++..|...+..  ....+..+.++   +++|.+| .| +.
T Consensus       226 AavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-~G~~P  301 (442)
T TIGR03372       226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL---CLAKALG-GGVMP  301 (442)
T ss_pred             EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee---eehhhhc-CCccc
Confidence            78888877777898887    6777778876 9999999999876533322  11122223322   4899998 78 68


Q ss_pred             ccccccCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CC-CCeecCCC
Q 014492          292 VGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VP-FLNPYPSY  362 (423)
Q Consensus       292 ~G~i~~~~~~~~~l~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~p~~  362 (423)
                      +|.+++++++.+.+..    ....|+.++++.+++.+.|+.-+- +...++.++.-+++.+.|++    .+ .+.-..+.
T Consensus       302 igavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~  380 (442)
T TIGR03372       302 IGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK  380 (442)
T ss_pred             ceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence            9999999998887732    123456688888888887753110 12233344444444444443    44 23323567


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      |.++.+.+.+......+.+.|+++||++.....  ..+.+||.+....+.++++++++.
T Consensus       381 Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~  437 (442)
T TIGR03372       381 GLLMAIEFRDNEIGYAFAKELFQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKA  437 (442)
T ss_pred             eEEEEEEeCChHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHH
Confidence            888889886433456788999999999976432  236899997643333444444443

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.78  E-value=5.7e-17  Score=171.76  Aligned_cols=285  Identities=14%  Similarity=0.089  Sum_probs=206.3

Q ss_pred             HHHHHHHHHHhCCCCCcEEEeCCHH----HHHHHHHHHhcCC-CC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCC
Q 014492          132 RRLRAALAKDSGLESDHILVGCGAD----ELIDLIMRCVLDP-GD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i~~t~G~~----~al~~~~~~l~~~-gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~  202 (423)
                      .++|+.+++++|.  +.|.++++++    +++.++++.+.++ ||    .|+++...|......+...|++++.+|.+.+
T Consensus       571 ~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~  648 (993)
T PLN02414        571 EDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAK  648 (993)
T ss_pred             HHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCC
Confidence            4899999999997  8899999999    8999999999866 88    8999999999888888889999999998777


Q ss_pred             CCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       203 ~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                      +.+|+++|++.+++  +++++|++++|+|-+|...+.+++.++++. |+++++|.++.......   ......+-++++.
T Consensus       649 G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l---~~p~~~GaD~~~~  725 (993)
T PLN02414        649 GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL---TSPGFIGADVCHL  725 (993)
T ss_pred             CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc---CCccccCCCEEEe
Confidence            89999999999974  478999999999999999999999999987 99999999985322111   1122455668999


Q ss_pred             cChhhhcc----cCccccccccCHHHHHHHHHh------------cCC--CCCc------HHHHHHHHHHhCC--hHHHH
Q 014492          280 TFSKRAGL----AGLRVGYGAFPLSIIEYLWRA------------KQP--YNVS------VAAEVAACAALQN--PIYLE  333 (423)
Q Consensus       280 S~SK~~g~----~G~R~G~i~~~~~~~~~l~~~------------~~~--~~~~------~~~~~a~~~~l~~--~~~~~  333 (423)
                      |.+|.|+.    .|-.+|++.+.+.+...+-..            ...  .+.+      .....++..++..  .+.+.
T Consensus       726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~  805 (993)
T PLN02414        726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLT  805 (993)
T ss_pred             cCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHH
Confidence            99997652    345578888776655443210            111  1111      1223333444433  45677


Q ss_pred             HHHHHHHHHHHHHHHHHccCCCCeecCCCceE---EEEEeC---C--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492          334 KVKEALIKERERLFKLLKDVPFLNPYPSYSNF---ILCEVT---S--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS  405 (423)
Q Consensus       334 ~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~---~~~~~~---~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis  405 (423)
                      +..++...+.+++.+.|++.-.+......+.+   ..+.++   +  +.+..++.++|.++||.....+ +...+++||+
T Consensus       806 ~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~-~pv~~~lmie  884 (993)
T PLN02414        806 DASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMS-WPVPGTLMIE  884 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeec-cccCCEEEEE
Confidence            88888889999999999763222221112221   123332   1  4677999999999999765433 3458899999


Q ss_pred             ec---ChhhHHHHHHHHhhh
Q 014492          406 VG---KPEHTDALMECLMHL  422 (423)
Q Consensus       406 ~~---~~~~~~~l~~al~~l  422 (423)
                      .+   +.++.|+|.+++..+
T Consensus       885 pTE~~skeelDrf~~al~~i  904 (993)
T PLN02414        885 PTESESKAELDRFCDALISI  904 (993)
T ss_pred             eeeeCCHHHHHHHHHHHHHH
Confidence            76   566677777777654

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.78  E-value=4.2e-18  Score=147.22  Aligned_cols=164  Identities=16%  Similarity=0.150  Sum_probs=133.3

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH-HHHHHCCCeEEEecCCCCCCCCH--
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGAAVVKVPRKSDFSLNV--  207 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~d~--  207 (423)
                      ..++++.++++++.+.+++++++|+++++.+++.++..++++|+++.+.|.... ..++..|++++.++.+++...+.  
T Consensus         2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~   81 (170)
T cd01494           2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV   81 (170)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence            367999999999766789999999999999999999888999999999998777 77888999999999655433333  


Q ss_pred             HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492          208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      +.+++.....+++++++++++||+|...+.+++.++++. |+++|+|++|..+...... ......+.++++.|++|.++
T Consensus        82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~~  160 (170)
T cd01494          82 AILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG-VLIPEGGADVVTFSLHKNLG  160 (170)
T ss_pred             hhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc-cccccccCCEEEEEcccccC
Confidence            356555545789999999999999999999999999987 9999999999977653321 11223445688899999887


Q ss_pred             ccCcccccccc
Q 014492          287 LAGLRVGYGAF  297 (423)
Q Consensus       287 ~~G~R~G~i~~  297 (423)
                      .  .++|++++
T Consensus       161 ~--~~~G~l~~  169 (170)
T cd01494         161 G--EGGGVVIV  169 (170)
T ss_pred             C--CceEEEEe
Confidence            4  67898875

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.78  E-value=4.2e-17  Score=157.43  Aligned_cols=273  Identities=12%  Similarity=0.067  Sum_probs=194.1

Q ss_pred             hHHHHHHHHHHhCCC-CCcEEEeCC-HHHHHHHHHHHhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCC----CC
Q 014492          131 SRRLRAALAKDSGLE-SDHILVGCG-ADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK----SD  202 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~-~~~i~~t~G-~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~----~~  202 (423)
                      ..++++.++++++.+ ..+|++++| ++.+++.++..++.+||++++..-+..  .+...++..|+ +..+..+    .+
T Consensus        39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~  117 (349)
T TIGR01364        39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT  117 (349)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence            457889999999973 346877766 999999999999999998776554443  55677888898 7666633    23


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      ..+|+++++  +. .++++|.+++..|.||+..+     ++++. ++++++|.+.+-.... -..   +..+  +++.|.
T Consensus       118 ~~~~~~~~~--~~-~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~-id~---~~~d--~~~~ss  183 (349)
T TIGR01364       118 KIPDPSTWE--IS-EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRP-IDV---SKFG--LIYAGA  183 (349)
T ss_pred             CCCCHHhcC--CC-CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCcc-CCH---HHcc--EEEEec
Confidence            356777665  23 58999999999999999876     56665 8999999998744321 111   2233  888888


Q ss_pred             hhhhcccCccccccccCHHHHHHHHH-----------h--cC-CCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHH
Q 014492          282 SKRAGLAGLRVGYGAFPLSIIEYLWR-----------A--KQ-PYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERE  344 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~~~~~~~l~~-----------~--~~-~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~  344 (423)
                      .|.+|.+|  +|+++.+++.++++..           .  .. +++++.....++.++|+.  .+ .++++.++.+++.+
T Consensus       184 qK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~  261 (349)
T TIGR01364       184 QKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQ  261 (349)
T ss_pred             ccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            99999777  6889998888765421           1  11 246777777777777764  23 48899999999999


Q ss_pred             HHHHHHccCCCCeec---CC-Cc-eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492          345 RLFKLLKDVPFLNPY---PS-YS-NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM  416 (423)
Q Consensus       345 ~l~~~L~~~~~~~~~---p~-~~-~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~  416 (423)
                      ++++.|++++++...   +. .. ..+.+.+++.....++...+.++|+.+.++..  ..+.+|+|+.   +.+|++.|.
T Consensus       262 ~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~  339 (349)
T TIGR01364       262 LLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALV  339 (349)
T ss_pred             HHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHH
Confidence            999999999744322   11 22 34556666321235666777789996666543  3468999975   577788888


Q ss_pred             HHHhhh
Q 014492          417 ECLMHL  422 (423)
Q Consensus       417 ~al~~l  422 (423)
                      ++|+++
T Consensus       340 ~al~~~  345 (349)
T TIGR01364       340 DFMKEF  345 (349)
T ss_pred             HHHHHH
Confidence            888765

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK02769 histidine decarboxylase; Provisional

Probab=99.78  E-value=1.1e-16  Score=155.73  Aligned_cols=273  Identities=10%  Similarity=0.003  Sum_probs=192.5

Q ss_pred             HHHHHHHHHHhCCCCCcE--EEeCCHHHHHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH
Q 014492          132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV  207 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i--~~t~G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~  207 (423)
                      .++++.+++++|.+++++  ++|+|++|++...+...  ..+++.|+++.-.|......++..|.+.+.|+.++++.+|+
T Consensus        68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~  147 (380)
T PRK02769         68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDY  147 (380)
T ss_pred             HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcH
Confidence            467888899999876654  88999999976665433  24678999999999999999999999998999777778999


Q ss_pred             HHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C---CEEEEccCCccccCC----CchhhhhccCCcEEE
Q 014492          208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P---ILVVLDEAYTEFSGL----ESRMEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~---~~li~Deay~~~~~~----~~~~~~~~~~~~~i~  277 (423)
                      ++|++.+.+.  +|.+|+++.++|+||.+.|.+++.++++. |   +++++|.+|+.+...    ...... .. +-..+
T Consensus       148 ~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~-~~-~vDsi  225 (380)
T PRK02769        148 DDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF-AD-GIDSI  225 (380)
T ss_pred             HHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc-cC-CCCEE
Confidence            9999999743  48899999999999999999999999987 6   699999999865421    001111 11 34567


Q ss_pred             EccChhhhcccCccccccccCHHHHHHHHHhcC---------CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERL  346 (423)
Q Consensus       278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l  346 (423)
                      ..|.+|.++ ....+|+++.+++..+.+.....         ..+.+.....++..+|+.  .+.+++..++..++.+++
T Consensus       226 s~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l  304 (380)
T PRK02769        226 AISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYA  304 (380)
T ss_pred             EECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Confidence            788999654 44558988888776665431111         123344455555555553  345788888999999999


Q ss_pred             HHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          347 FKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      .+.|++.+......+..+.+.++.|.    +++.     +|..+...     .+++||.+....+.+.+++.++.
T Consensus       305 ~~~L~~~g~~~~~~p~~~~v~f~~~~----~~~~-----~~w~l~~~-----~~~~hi~~~~~~~~~~~~~f~~d  365 (380)
T PRK02769        305 VDRLQANGIPAWRNPNSITVVFPCPS----ERIW-----KKWHLATS-----GNQAHIITMPHHNKQQIDSLIDE  365 (380)
T ss_pred             HHHHHhCCCEEEcCCCceEEEEcCCC----HHHH-----hCeeEccc-----CCEEEEEECCCCCHHHHHHHHHH
Confidence            99998876444455567777776552    2222     34444432     25899998754433444444443

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=1.4e-16  Score=151.71  Aligned_cols=265  Identities=18%  Similarity=0.184  Sum_probs=183.7

Q ss_pred             HHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHH
Q 014492          111 PEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAA  188 (423)
Q Consensus       111 ~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~  188 (423)
                      .+..+++.+......+ +.+...++++++++++|+  ...+.++++|.|+.+++.++ ++|||+|++++-+|........
T Consensus        15 ~~e~~~v~~vl~sg~i~~G~~v~~FE~~~ae~~G~--k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~   92 (374)
T COG0399          15 EEELAAVQEVLKSGWLTGGPFVRRFEQAFAEYLGV--KYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVL   92 (374)
T ss_pred             hHHHHHHHHHHHcCCeecChHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHH
Confidence            3445555553221222 333468999999999996  45777777888999999865 6999999999999999888888


Q ss_pred             HCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCch
Q 014492          189 VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR  265 (423)
Q Consensus       189 ~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~  265 (423)
                      ..|++++.|+.| +.+.+|++.+|++|. +++|+|+.   -+--|...+.+.|.+|++. |++||+|.+++..+ +.+..
T Consensus        93 ~~Ga~PVFvDid~~T~nid~~~ie~aIt-~~tKAIip---Vhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~  168 (374)
T COG0399          93 LVGAKPVFVDIDPDTLNIDPDLIEAAIT-PRTKAIIP---VHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKK  168 (374)
T ss_pred             HcCCeEEEEecCCcccCCCHHHHHHHcc-cCCeEEEE---ehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcc
Confidence            999999999976 568999999999998 67999994   4456888999999999998 99999999998665 33333


Q ss_pred             hhhhccCCcEEEEccC--hhhhcccCcccccccc-CHHHHHHHHHhcCC------------------CCCcHHHHHHHHH
Q 014492          266 MEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP------------------YNVSVAAEVAACA  324 (423)
Q Consensus       266 ~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~------------------~~~~~~~~~a~~~  324 (423)
                      ....++    +-+.||  +|.+.. | --|.++. ++++.++++..+..                  +.++.+.++....
T Consensus       169 vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~  242 (374)
T COG0399         169 VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLA  242 (374)
T ss_pred             cccccc----eEEEEecCCCCccc-c-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHH
Confidence            333322    556666  688863 3 3477777 45677766644211                  1223333333333


Q ss_pred             HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCc---eE-EEEEeCC-CCCHHHHHHHHHhCCcEE
Q 014492          325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYS---NF-ILCEVTS-GMDAKKLKDDLAKMGVMI  390 (423)
Q Consensus       325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~---~~-~~~~~~~-~~~~~~l~~~L~~~gI~v  390 (423)
                      -|   +.+++..++-++..++..+.|++++++..  .+...   .+ ..+.+++ +.+.+.+.+.|.++||..
T Consensus       243 QL---~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~  312 (374)
T COG0399         243 QL---ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGA  312 (374)
T ss_pred             HH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCCCc
Confidence            33   34555555556667777778887764432  22222   22 2344543 478899999999887664

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.77  E-value=4.4e-16  Score=153.57  Aligned_cols=311  Identities=17%  Similarity=0.114  Sum_probs=205.3

Q ss_pred             CCCHHHHHHHhc-CCCCC----CCCCc-c-hHHHHHHHHHHhCCC-C-CcEEE--eCCHHHHHHHHHHHhc--------C
Q 014492          108 GPPPEVREALGQ-LKFPY----IYPDP-E-SRRLRAALAKDSGLE-S-DHILV--GCGADELIDLIMRCVL--------D  168 (423)
Q Consensus       108 ~~~~~v~~al~~-~~~~~----~Y~~~-g-~~~lr~~ia~~~g~~-~-~~i~~--t~G~~~al~~~~~~l~--------~  168 (423)
                      ++.|++.+.+.. +....    .+|.. . .+++++.+++.+|++ + +++..  |+|++|++.+++.+..        .
T Consensus        52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~  131 (431)
T TIGR01788        52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA  131 (431)
T ss_pred             CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence            445777777755 22111    12221 1 346788888889987 3 45554  8999999998876542        1


Q ss_pred             CC-----CeEEEcCCCchhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          169 PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       169 ~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      .|     ..|+++.-.|.++...++..|++++.+|.+.+ +.+|+++|++++. +++.+|+++..+|.||.+.|.+++.+
T Consensus       132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~-~~t~lV~~t~g~t~tG~idpi~~I~~  210 (431)
T TIGR01788       132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD-ENTIGVVCILGTTYTGEYEDVKALND  210 (431)
T ss_pred             cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh-hCCeEEEEEeCCCCCcccCCHHHHHH
Confidence            12     36888999999999999999999999998754 5799999999997 67889999999999999999999999


Q ss_pred             HHcC-------CCEEEEccCCcccc----CCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH--HHHHHHHh-
Q 014492          243 ILEM-------PILVVLDEAYTEFS----GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRA-  308 (423)
Q Consensus       243 i~~~-------~~~li~Deay~~~~----~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~--~~~~l~~~-  308 (423)
                      +++.       ++++++|.+|+.+.    ...... .+....-.-+..|.+|.+ +....+|+++..+.  +.+.+... 
T Consensus       211 i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~-~~~~~~~DSis~s~HK~~-~~P~g~G~l~~r~~~~l~~~~~~~~  288 (431)
T TIGR01788       211 ALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEW-DFRLPRVKSINVSGHKYG-LVYPGVGWVIWRDEEALPEELIFHV  288 (431)
T ss_pred             HHHHHHhhhCCCceEEEecccHHHHHHHhCCCchh-hcCCCCceEEEECchhcc-CCCCCcEEEEEeChHHcchhheecc
Confidence            9973       69999999998543    111111 112233445777899953 33444788887543  22222100 


Q ss_pred             ---c--C---CCCCcHH--HHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C-CCceEEEEEeCC--
Q 014492          309 ---K--Q---PYNVSVA--AEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-P-SYSNFILCEVTS--  372 (423)
Q Consensus       309 ---~--~---~~~~~~~--~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~~~~~~~~~--  372 (423)
                         .  .   ....+..  ........|..  .+.+++..++..++.+++.+.|++.+.+.+. + ...+.+.+++++  
T Consensus       289 ~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~  368 (431)
T TIGR01788       289 NYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA  368 (431)
T ss_pred             cccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC
Confidence               0  0   0111211  11222222222  2457788888899999999999998866643 3 356667777753  


Q ss_pred             --CCCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          373 --GMDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       373 --~~~~~~l~~~L~~~gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                        +.+..++.+.|.++|+.+.....+   .+.-++|+++.   +....++|.+.|+.
T Consensus       369 ~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~  425 (431)
T TIGR01788       369 DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA  425 (431)
T ss_pred             CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence              357788999999999977544331   22347899985   23344555555543

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.77  E-value=5e-16  Score=154.83  Aligned_cols=323  Identities=14%  Similarity=0.173  Sum_probs=203.9

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +..++.++|+..+  ...++ .+|+|.+|+.+ +.   ... .++.+...+|.+.+++...-..+.+++++++++|++.+
T Consensus        78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A  157 (459)
T PRK11522         78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAA  157 (459)
T ss_pred             ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHH
Confidence            3557889999877  44454 46889888876 22   112 23444556777888877653446899999999999999


Q ss_pred             HHHhc---C-CC-CeEEEcCCCchhhHHHHHH-CCCeEEE---ecCCCCC----CCCHHHHHHHhhc-----CCceEEEE
Q 014492          163 MRCVL---D-PG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVER-----EKPKCIFL  224 (423)
Q Consensus       163 ~~~l~---~-~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~~---v~~~~~~----~~d~~~l~~~i~~-----~~~~~i~l  224 (423)
                      ++...   . +| ..|+....+|++....+.. .|-....   .|..++.    -.|.+++++.++.     .++.+|++
T Consensus       158 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIv  237 (459)
T PRK11522        158 LKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVIL  237 (459)
T ss_pred             HHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEE
Confidence            88432   1 22 4688888888765443322 2211111   1111110    1267888877752     35678888


Q ss_pred             cCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccC-ccccccc
Q 014492          225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRVGYGA  296 (423)
Q Consensus       225 ~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~  296 (423)
                      ...+...|.+.+    .+++.++|+. |+++|+||++..|...+...  ...+..+.++   +++|.+| .| +.+|.++
T Consensus       238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~lg-gG~~Pigav~  313 (459)
T PRK11522        238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL---CLAKALG-GGVMPIGATI  313 (459)
T ss_pred             ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE---Eechhhh-CCCccceeEE
Confidence            877888899887    6677778876 99999999998764333221  1112223322   6799998 67 6899999


Q ss_pred             cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CC-CCeecCCCceEEE
Q 014492          297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VP-FLNPYPSYSNFIL  367 (423)
Q Consensus       297 ~~~~~~~~l~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~p~~~~~~~  367 (423)
                      +.+++.+.+..    ....|+.++++.+++.+.|+.-+- +...++.+++-++|.+.|++    .+ .+.-..+.|.++.
T Consensus       314 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~g  392 (459)
T PRK11522        314 ATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMA  392 (459)
T ss_pred             EcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEE
Confidence            99988876642    123356688888888877764111 13445555555666666554    33 2222345688888


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492          368 CEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM  420 (423)
Q Consensus       368 ~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~  420 (423)
                      +.+.+......+.+.|.++||++.+..  ...+.+||.+..   .++.+++.++++
T Consensus       393 iel~~~~~~~~i~~~l~~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~  446 (459)
T PRK11522        393 IEFVDNEIGYNFASEMFRQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAAR  446 (459)
T ss_pred             EEecCchHHHHHHHHHHHCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHH
Confidence            888643335678888999999997643  234789999763   444454444443

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.77  E-value=2.4e-16  Score=153.28  Aligned_cols=274  Identities=16%  Similarity=0.165  Sum_probs=181.2

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHHCCCeEEEecCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSD  202 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~v~~~~~  202 (423)
                      .+|...+|++.++++.|.  +..+++++++.|+.+++.+++++||+|+++.+.|.    .+...+...|++++.++.++.
T Consensus        62 ~~P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~  139 (384)
T PRK06434         62 GNPTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL  139 (384)
T ss_pred             CChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence            556678999999999985  35677777779999999999999999999887664    333556678999999986432


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      ..++       ++..++++|++.+|.|||+.+.+.+++.++++. +  +++|.++..... ..+.    ..+-.+++.|.
T Consensus       140 ~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~-~~pl----~~gaDivv~S~  205 (384)
T PRK06434        140 NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-QNPL----DLGADVVIHSA  205 (384)
T ss_pred             hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-CCch----hcCCCEEEeec
Confidence            2222       333478999999999999999999999999987 6  567999752221 1222    23445899999


Q ss_pred             hhhhcccC-cccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       282 SK~~g~~G-~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      +|.++.+| .=.|.++. ++++.++++.....  ...++.....+..   ..+.++.+.++.+++...+.+.|++.+.+.
T Consensus       206 tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~---gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~  282 (384)
T PRK06434        206 TKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALR---GLKTLGLRMEKHNKNGMELARFLRDSKKIS  282 (384)
T ss_pred             ccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh---CCCcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence            99886433 32466766 55666666644322  3445544333333   334567777788889999999999887653


Q ss_pred             --ecCC----------CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-----------------------CCCCCeE
Q 014492          358 --PYPS----------YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-----------------------KELKGYV  402 (423)
Q Consensus       358 --~~p~----------~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-----------------------~~~~~~i  402 (423)
                        .+|+          .|..+.+++.+......|.+.|.--.+.+.-|+.                       .-.++.|
T Consensus       283 ~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~li  362 (384)
T PRK06434        283 NVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLV  362 (384)
T ss_pred             EEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeE
Confidence              2443          4667778885222233444444211111111110                       0124689


Q ss_pred             EEEecChhhHHHHHHHHh
Q 014492          403 RVSVGKPEHTDALMECLM  420 (423)
Q Consensus       403 Ris~~~~~~~~~l~~al~  420 (423)
                      |||++.++ .++|.+-|+
T Consensus       363 RlsvGlEd-~~dLi~dl~  379 (384)
T PRK06434        363 RFSIGIED-IDDLIKDIE  379 (384)
T ss_pred             EEEeCcCC-HHHHHHHHH
Confidence            99999875 466655544

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.76  E-value=4.5e-16  Score=153.81  Aligned_cols=325  Identities=15%  Similarity=0.175  Sum_probs=192.1

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHhCCC--C-CcEEE-eCCHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE--S-DHILV-GCGADE  157 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~~~----Y~~~g~~~lr~~ia~~~g~~--~-~~i~~-t~G~~~  157 (423)
                      +.+++.+||+..+.  ..++ .+|++.+++.+ +. ..+.    +......+|-+.+++....+  . +.+++ ++++++
T Consensus        31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse  110 (412)
T TIGR02407        31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN  110 (412)
T ss_pred             eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence            45678899997763  3333 47899998876 32 1111    11222345666666653111  1 24655 589999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC---CCHHHHHHHhhc---
Q 014492          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS---LNVELIADAVER---  216 (423)
Q Consensus       158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~---~d~~~l~~~i~~---  216 (423)
                      +++.+++...  ....+|+....+|++....+.. .|            ..++.+|.++-..   -+++.+++.+.+   
T Consensus       111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~  190 (412)
T TIGR02407       111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS  190 (412)
T ss_pred             HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence            9999988542  2236788888888755543322 11            1223344221111   246778887753   


Q ss_pred             --CCceEEEEcCCCCCcCc-CCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcc
Q 014492          217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       217 --~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~  287 (423)
                        +++.+|++...+++.|. +.+.+.+++|.+.    |+++|+||++..|...+....  ..+..+.   +.+++|.++.
T Consensus       191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD---i~~~~K~lg~  267 (412)
T TIGR02407       191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD---IVCLSKSISG  267 (412)
T ss_pred             CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC---EEEechhccC
Confidence              35678888878888998 5577767666553    999999999987643222211  1112222   2357899983


Q ss_pred             cCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhC----ChHHHHHHHHHHHHHHHHHHHHHccCC-CCeecC
Q 014492          288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ----NPIYLEKVKEALIKERERLFKLLKDVP-FLNPYP  360 (423)
Q Consensus       288 ~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~p  360 (423)
                      .|+|+|++++++++ +.+..  ....|+.++++..++.++++    +++..+...+.-+..++++.+..+..+ .+...+
T Consensus       268 ~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vr  346 (412)
T TIGR02407       268 YGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVR  346 (412)
T ss_pred             CccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeee
Confidence            39999999998875 44422  22346677776655555443    333333322222223333333223344 223346


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      ..|.++|+++++......+.+.+.++||.+.+.+.  ..+.|||+.....+.+++.++++.
T Consensus       347 g~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~  405 (412)
T TIGR02407       347 GRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDI  405 (412)
T ss_pred             cceeEEEEEecChHHHHHHHHHHHHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence            77899999997554567888899999999987532  246899998743333455555544

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.76  E-value=1.7e-16  Score=154.71  Aligned_cols=251  Identities=18%  Similarity=0.188  Sum_probs=175.8

Q ss_pred             cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCC
Q 014492          129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN  206 (423)
Q Consensus       129 ~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d  206 (423)
                      +...++++++++++|.  ++++.+++++.|+.+++.++ +++||+|+++.-+|..........|++++.++.+ +++.+|
T Consensus        25 ~~~~~fE~~~a~~~g~--~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id  102 (363)
T PF01041_consen   25 PYVEEFEKEFAEYFGV--KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID  102 (363)
T ss_dssp             HHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred             HHHHHHHHHHHHHhCC--CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence            3468999999999994  67888888999999999987 5789999999999999999999999999999976 789999


Q ss_pred             HHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccC--h
Q 014492          207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF--S  282 (423)
Q Consensus       207 ~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~--S  282 (423)
                      ++.+++.+. +++|+|++.|   .-|...+.+++.++|+. |++||+|.+++.+.. .+......+    .+.+.||  +
T Consensus       103 ~~~~~~~i~-~~t~ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g----d~~~fSf~~~  174 (363)
T PF01041_consen  103 PEALEKAIT-PKTKAILVVH---LFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG----DIAIFSFHPT  174 (363)
T ss_dssp             HHHHHHHHH-TTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS----SEEEEESSTT
T ss_pred             HHHHHHHhc-cCccEEEEec---CCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC----CceEecCCCC
Confidence            999999998 7899999654   45788899999999986 999999999996552 222222222    2666666  6


Q ss_pred             hhhcccCccccccccC-HHHHHHHHHhcCC-------------------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 014492          283 KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-------------------YNVSVAAEVAACAALQNPIYLEKVKEALIKE  342 (423)
Q Consensus       283 K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  342 (423)
                      |.+. .|. -|+++.+ +++.++++..+..                   +.++.+..+.+..-|   +.+++..++-+++
T Consensus       175 K~i~-~ge-GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL---~~L~~~~~~R~~~  249 (363)
T PF01041_consen  175 KIIT-TGE-GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQL---KRLDEIIARRREN  249 (363)
T ss_dssp             SSS--SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHH---HTHHHHHHHHHHH
T ss_pred             CCCc-CCC-CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHH---HHhhhhHHHHHHH
Confidence            8774 332 3777774 6677777654321                   234455544444444   3356666666788


Q ss_pred             HHHHHHHHccCCCCee--cCCCc----e-EEEEEeCCC--CCHHHHHHHHHhCCcEEEeCC
Q 014492          343 RERLFKLLKDVPFLNP--YPSYS----N-FILCEVTSG--MDAKKLKDDLAKMGVMIRHYN  394 (423)
Q Consensus       343 ~~~l~~~L~~~~~~~~--~p~~~----~-~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~  394 (423)
                      .+++.+.|.+++++..  .+.+.    . .+.+.+++.  .+.+++.+.|.++||.+....
T Consensus       250 a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~  310 (363)
T PF01041_consen  250 AQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPHY  310 (363)
T ss_dssp             HHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCST
T ss_pred             HHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccccc
Confidence            8889999999886542  12221    2 234556533  468999999999999998654

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.76  E-value=5.3e-16  Score=155.01  Aligned_cols=318  Identities=15%  Similarity=0.106  Sum_probs=198.1

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhc-C--CCCCCCC------C-cchHHHHH----HHHHHhCCCCCcEEE---eCCHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------D-PESRRLRA----ALAKDSGLESDHILV---GCGADEL  158 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Y~------~-~g~~~lr~----~ia~~~g~~~~~i~~---t~G~~~a  158 (423)
                      +-|.|-.+||..  ++.+.+++.. +  .+..+||      . ....++++    ...+.|+.+.+.+++   .++++.+
T Consensus        35 ~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~A  112 (475)
T PLN03226         35 KGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPA  112 (475)
T ss_pred             cCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHH
Confidence            458888888876  4778888765 2  2333332      1 12334443    344556766655544   2445567


Q ss_pred             HHHHHHHhcCCCCeEEEcCC---CchhhHHH---HHHCCCeEE----EecC-CCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPP---TFTMYEFD---AAVNGAAVV----KVPR-KSDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p---~y~~~~~~---~~~~g~~~~----~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      +..++.++++|||+|+..+.   .|..+...   .+..+....    .+.. .+++.+|++++++.+.+.++++|++. .
T Consensus       113 N~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~  191 (475)
T PLN03226        113 NFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-A  191 (475)
T ss_pred             HHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-c
Confidence            77888889999999998542   22222111   111222221    2322 24568999999999976688877653 3


Q ss_pred             CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH----
Q 014492          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII----  302 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~----  302 (423)
                      ++ +|...|.+++.+||+. |+++++|++|............. .....++++|++|.+  .|.+-|+++++++.+    
T Consensus       192 S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-~~~~Div~~t~hK~L--~GP~Gg~I~~~~~~~~~~~  267 (475)
T PLN03226        192 SA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP-FEYCDVVTTTTHKSL--RGPRGGMIFFRKGPKPPKG  267 (475)
T ss_pred             Cc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-CCCCeEEEecCcccc--cCCCceEEEEchhhccccc
Confidence            33 7899999999999998 99999999998544222111110 113458899999987  233348888877544    


Q ss_pred             -------HH---HHHhcCC---CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceE
Q 014492          303 -------EY---LWRAKQP---YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNF  365 (423)
Q Consensus       303 -------~~---l~~~~~~---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~  365 (423)
                             +.   +.....+   .+++.....++..+++.-  ...++.++++.++.++|.+.|.+.+ +.+..  .....
T Consensus       268 ~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi  346 (475)
T PLN03226        268 QGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHL  346 (475)
T ss_pred             CCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCE
Confidence                   22   1111111   233444444445555431  1246678899999999999998865 44333  23466


Q ss_pred             EEEEe-CCCCCHHHHHHHHHhCCcEEEeCCC-----CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          366 ILCEV-TSGMDAKKLKDDLAKMGVMIRHYNN-----KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       366 ~~~~~-~~~~~~~~l~~~L~~~gI~v~~~~~-----~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      +++++ +.+.+..++.+.|.+.||.+..+.-     +-.+..||++..       .+++++++.+.|.+
T Consensus       347 ~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~  415 (475)
T PLN03226        347 VLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR  415 (475)
T ss_pred             EEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence            77787 5577888999999999999975432     223567999532       35566777666654

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.76  E-value=2.8e-16  Score=152.73  Aligned_cols=300  Identities=14%  Similarity=0.101  Sum_probs=197.7

Q ss_pred             CCCCCCHHHHHHHhcCC-----CCCCCCCc--chHHHHHHHHHHhCCCC-CcEEEe-CCHHHHHHHHHHHhcCCCCeEEE
Q 014492          105 NPYGPPPEVREALGQLK-----FPYIYPDP--ESRRLRAALAKDSGLES-DHILVG-CGADELIDLIMRCVLDPGDKIVD  175 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~-----~~~~Y~~~--g~~~lr~~ia~~~g~~~-~~i~~t-~G~~~al~~~~~~l~~~gd~Vl~  175 (423)
                      .|...++++++++....     .+++-+..  -..+.|+.+++++++++ .+|+++ +|++.+++.++..++.+ +.+++
T Consensus        10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i   88 (361)
T TIGR01366        10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHL   88 (361)
T ss_pred             CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEE
Confidence            34455789999987521     12333333  36789999999999854 478886 55999999999988743 33444


Q ss_pred             cCCCch-hhHHHHHH--CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492          176 CPPTFT-MYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (423)
Q Consensus       176 ~~p~y~-~~~~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li  251 (423)
                      ..-.|. .+...++.  ++.++..++.+.+..++.     .+. +++++|.+++..|.||.+.|.+++   ++. |++++
T Consensus        89 ~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i  159 (361)
T TIGR01366        89 SFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVV  159 (361)
T ss_pred             ecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-CCCCEEEEcccCCccceecccccc---cccCCCeEE
Confidence            455564 44445554  233566666444433333     233 689999999999999999998887   454 99999


Q ss_pred             EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-----------------------
Q 014492          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-----------------------  308 (423)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-----------------------  308 (423)
                      +|.+.+..... -...   .  -.+++.|..|.+|.+|- +++++.+++.++++...                       
T Consensus       160 VDavqs~g~~~-idv~---~--~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~  232 (361)
T TIGR01366       160 IDATSGAGGLP-VDIA---E--TDVYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKN  232 (361)
T ss_pred             EEcCccccCCC-CCHH---H--CCEEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccC
Confidence            99998844321 1111   1  34788999999987752 55556678777665421                       


Q ss_pred             cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-CC---c-eEEEEEeCCCCCHHHHH
Q 014492          309 KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-SY---S-NFILCEVTSGMDAKKLK  380 (423)
Q Consensus       309 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~---~-~~~~~~~~~~~~~~~l~  380 (423)
                      ..+++++.....++.++++.   ...++...++.++..+++++.|++++++.+.. ..   . ....+.++++.+..++.
T Consensus       233 ~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~  312 (361)
T TIGR01366       233 QTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVA  312 (361)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHH
Confidence            11233444444455555543   21367778889999999999999988654331 11   1 11234456688999999


Q ss_pred             HHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          381 DDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       381 ~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +.|.++||.+.++......+.+|||+.   +.++.++|.++|+.
T Consensus       313 ~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~  356 (361)
T TIGR01366       313 KILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW  356 (361)
T ss_pred             HHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence            999989999976543333568999975   56677777777765

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.75  E-value=6e-16  Score=152.00  Aligned_cols=316  Identities=15%  Similarity=0.132  Sum_probs=193.7

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~~g~--~~~~i~~t~G~~~al~~~~~  164 (423)
                      ..++.++|+..+  ...++ .+|++.+++.+. . ..+.+.. ...+.+..+++.+.-  ..+.++++++++++++.+++
T Consensus        33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik  111 (395)
T PRK03715         33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPA-FYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIK  111 (395)
T ss_pred             CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccccc-ccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHH
Confidence            456789999765  23343 368898888762 2 1111211 123344455555431  23689999999999999998


Q ss_pred             Hhc------CCC-CeEEEcCCCchhhHHHH-HHCCCeEE---EecCCCCC----CCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492          165 CVL------DPG-DKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPNN  229 (423)
Q Consensus       165 ~l~------~~g-d~Vl~~~p~y~~~~~~~-~~~g~~~~---~v~~~~~~----~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (423)
                      ...      ++| .+|+.....|+.....+ ...|....   ..|...++    ..|++++++.+. .++.+|++...++
T Consensus       112 ~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~  190 (395)
T PRK03715        112 LARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQG  190 (395)
T ss_pred             HHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcC
Confidence            664      123 56888888887544333 23332211   11111111    247899999886 5788999888888


Q ss_pred             CcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492          230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (423)
Q Consensus       230 PtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~  302 (423)
                      ..|.+.+    .+++.++|+. |+++|+||+|..|...+...  ...+..+.   +.+++|.+| .|+.+|.+++++++.
T Consensus       191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PD---i~t~gK~lg-~G~p~~av~~~~~i~  266 (395)
T PRK03715        191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPD---IMTLGKGIG-GGVPLAALLAKAEVA  266 (395)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCc---eeeehhhhh-CCcceEEEEEccccc
Confidence            8888876    6677777776 99999999999765433221  12222222   346789998 689999999888875


Q ss_pred             HHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEeCCCCCHH
Q 014492          303 EYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEVTSGMDAK  377 (423)
Q Consensus       303 ~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~~~~~~~~  377 (423)
                      ..... ....|+.++++..++.+.|+.-+ -++..++.+++.+++.+.|++    .+ +....+.|.++.+.+.+ ....
T Consensus       267 ~~~~~~~~~T~~g~pl~~aaala~L~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~-~~~~  343 (395)
T PRK03715        267 VFEAGDQGGTYNGNPLMTAVGVAVISQLL-APGFLEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGK-DIGP  343 (395)
T ss_pred             cccCCCcCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecC-chHH
Confidence            21111 12346678888887877775422 123455555566666666554    34 22234667888888853 1234


Q ss_pred             HHHHHHHhC---CcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492          378 KLKDDLAKM---GVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM  420 (423)
Q Consensus       378 ~l~~~L~~~---gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~  420 (423)
                      .+.+.+.+.   ||++....    .+.+||++..   .++.+++.++|+
T Consensus       344 ~~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~  388 (395)
T PRK03715        344 QIVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLR  388 (395)
T ss_pred             HHHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHH
Confidence            566555555   99987543    3689999864   444444444443

>PLN02271 serine hydroxymethyltransferase

Probab=99.75  E-value=2.2e-15  Score=148.66  Aligned_cols=318  Identities=16%  Similarity=0.100  Sum_probs=210.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHHH----HHHHHHHhCCCC----CcEEEeCCHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRRL----RAALAKDSGLES----DHILVGCGAD  156 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~------~~g-~~~l----r~~ia~~~g~~~----~~i~~t~G~~  156 (423)
                      .+-|.|-.+||-.  ++.+.+++...   .+..+||      ... ..++    .+...+.||.++    -+|..-+|+.
T Consensus       148 ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~  225 (586)
T PLN02271        148 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTS  225 (586)
T ss_pred             hcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHH
Confidence            3458888888866  58888888762   2223332      211 2233    344445678766    5777776665


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCchhhHHH---------HHHCCCeEEEec--CC-CCCCCCHHHHHHHhhcCCceEEEE
Q 014492          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---------AAVNGAAVVKVP--RK-SDFSLNVELIADAVEREKPKCIFL  224 (423)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---------~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~i~l  224 (423)
                       |+..++.++++|||+|+..+..|.++...         +...|..+..+|  .+ +++.+|.+++++.....+||+|++
T Consensus       226 -AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~  304 (586)
T PLN02271        226 -ANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC  304 (586)
T ss_pred             -HHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence             77778888999999999988777644332         233465544444  53 457899999999665689999998


Q ss_pred             cCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH---
Q 014492          225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS---  300 (423)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~---  300 (423)
                      ..-.+|  ..+|.+++.+||+. |+++++|.+|....-........ .....++.+|.+|.+  .|-|-|.++.+++   
T Consensus       305 g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP-~~~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~  379 (586)
T PLN02271        305 GGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP-FDYCDIVTSTTHKSL--RGPRGGIIFYRKGPKL  379 (586)
T ss_pred             Cchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCC-CcCCcEEEeCCcccC--CCCCceEEEecccccc
Confidence            877888  78999999999997 99999999997543211111110 112458999999975  5666788887643   


Q ss_pred             -----------------HHHHHHHhcCCC---CCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          301 -----------------IIEYLWRAKQPY---NVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       301 -----------------~~~~l~~~~~~~---~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                                       +.+++.....|.   ++.....++...++.   .++| .+..+++.+|.+.|.+.|.+.++-.
T Consensus       380 ~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~ef-k~Ya~QVv~NAkaLA~~L~~~G~~v  458 (586)
T PLN02271        380 RKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEY-KAYMQQVKKNAQALASALLRRKCRL  458 (586)
T ss_pred             cccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHH-HHHHHHHHHHHHHHHHHHHHCCCeE
Confidence                             455555544442   111122333344444   3454 7888889999999999998887544


Q ss_pred             ecC-CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEe----CCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          358 PYP-SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRH----YNN-KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       358 ~~p-~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~----~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      +.. .....+++++.. +.+...+.+.|.+.||.+..    +.. +..++.|||...       .+++++++.+.|.+
T Consensus       459 v~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~  536 (586)
T PLN02271        459 VTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLR  536 (586)
T ss_pred             eeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHH
Confidence            432 233456788853 56778888888899999963    332 334678999853       35667777666654

>PLN03032 serine decarboxylase; Provisional

Probab=99.74  E-value=9.9e-16  Score=148.00  Aligned_cols=274  Identities=13%  Similarity=0.035  Sum_probs=190.5

Q ss_pred             HHHHHHHHHHhCCCCCcE--EEeCCHHHHHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH
Q 014492          132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV  207 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i--~~t~G~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~  207 (423)
                      .++++.+++++|.+++++  ++|+|+|+++..++....  .++..|+++.-.|.+....++..|.+++.||.+.++.+|+
T Consensus        69 ~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~  148 (374)
T PLN03032         69 VGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDY  148 (374)
T ss_pred             HHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcH
Confidence            468888889999988876  999999999988877543  2456788888999999999999999999999888889999


Q ss_pred             HHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C-----CEEEEccCCccccC--CC--chhhhhccCCcE
Q 014492          208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P-----ILVVLDEAYTEFSG--LE--SRMEWVKKHDNL  275 (423)
Q Consensus       208 ~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~-----~~li~Deay~~~~~--~~--~~~~~~~~~~~~  275 (423)
                      ++|++++.+.  +|.+|+++..+|+||.+-|.+++.++++. |     +++++|.+|..+..  ..  .....  ..+-.
T Consensus       149 ~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~--~~~vD  226 (374)
T PLN03032        149 DDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF--RKPIG  226 (374)
T ss_pred             HHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC--CcCCc
Confidence            9999999742  57788888999999999999999999986 4     58999999975431  10  11111  11234


Q ss_pred             EEEccChhhhcccCccccccccCHHHHHHHHHhcCC---------CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHH
Q 014492          276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---------YNVSVAAEVAACAALQN--PIYLEKVKEALIKERE  344 (423)
Q Consensus       276 i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~---------~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~  344 (423)
                      -+..|.+|.+| ....+|.++...+.++.+......         ++-+......+...|..  .+.+.++.++..++.+
T Consensus       227 Sis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~  305 (374)
T PLN03032        227 SVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAH  305 (374)
T ss_pred             EEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            56778899655 455589888887766554321111         11233334444444443  3557788888889999


Q ss_pred             HHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          345 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       345 ~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      ++.+.|++.++.....+..+.+.++-|   ..+.    +. +|..+..-     .+++||++....+.+.+.+.++.
T Consensus       306 ~l~~~l~~~~~~~~~~p~~~~V~f~~~---~~~~----~~-~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~d  369 (374)
T PLN03032        306 YLKDRLTEAGLTCRLNELSSTVVFERP---MDEA----FI-KKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEE  369 (374)
T ss_pred             HHHHHHHhCCCcEEECCCceEEEEcCC---CcHh----Hh-heeeeccc-----CCEEEEEECCCCCHHHHHHHHHH
Confidence            999999888765555556666766655   1121    22 34444432     35899998753333444444443

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.74  E-value=3.6e-15  Score=148.63  Aligned_cols=321  Identities=16%  Similarity=0.162  Sum_probs=194.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~-~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      ..+++.+||+..+.  ..++ .+|+|.+++.+ +...    . .++.+...+|.+.|++.++-. .+.|+++++++++++
T Consensus        38 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e  117 (445)
T PRK08593         38 DVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAND  117 (445)
T ss_pred             eCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            34578899997663  3344 46888888876 2211    1 134444567888888877533 258999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHH-HCC-------------CeEEEecCCCCCC-----CC-------HHHHHH
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNG-------------AAVVKVPRKSDFS-----LN-------VELIAD  212 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~v~~~~~~~-----~d-------~~~l~~  212 (423)
                      .+++...  ....+|+....+|++....+- ..+             ..++.+|.++.+.     .+       ++++++
T Consensus       118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  197 (445)
T PRK08593        118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE  197 (445)
T ss_pred             HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence            9998432  123568888888875443222 111             1123344221110     11       244544


Q ss_pred             Hhh----cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccC
Q 014492          213 AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF  281 (423)
Q Consensus       213 ~i~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~  281 (423)
                      .+.    ..++.+|++...++..|.+.+    .+++.++|+. |+++|+||+|..|...+...  ...+..+.   +.++
T Consensus       198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD---i~t~  274 (445)
T PRK08593        198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD---LMSF  274 (445)
T ss_pred             HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC---Eeee
Confidence            442    246888888888888898765    4555666665 99999999998775433221  12222223   3368


Q ss_pred             hhhhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCC
Q 014492          282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPF  355 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~  355 (423)
                      +|.++ .|+++|++++++++++.+....  ..++.+++++.++.+.|+.-+- +...++.+++.+++.+.|+    +.+.
T Consensus       275 gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~  352 (445)
T PRK08593        275 GKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED-ESLLQRSAEKGEYARKRFDQWVSKYNF  352 (445)
T ss_pred             ccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            99998 7899999999999988775322  2456788888888777753110 1233344444444444443    3554


Q ss_pred             CeecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492          356 LNPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM  420 (423)
Q Consensus       356 ~~~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~  420 (423)
                      +.-..+.|.++.+.+...        .....+...|.++||++.+..    .+.+|+++..   .++.+++.++++
T Consensus       353 v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~  424 (445)
T PRK08593        353 VGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA----GNVLRFQPPLVITYEQLDTALNTIE  424 (445)
T ss_pred             EEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC----CCEEEEECCCccCHHHHHHHHHHHH
Confidence            433456677766666311        113567788889999997642    3689998763   444444444443

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.74  E-value=3.3e-15  Score=148.39  Aligned_cols=326  Identities=16%  Similarity=0.156  Sum_probs=194.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC-CCC----CCCCcchHHHHHHHHHHhCCC--CC-cEEE-eCCHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FPY----IYPDPESRRLRAALAKDSGLE--SD-HILV-GCGADE  157 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~~----~Y~~~g~~~lr~~ia~~~g~~--~~-~i~~-t~G~~~  157 (423)
                      +.+++.+||+..+.  ..++ .+|++.+++.+ +. ..+    .+..+...+|-+.+++.+..+  .+ .+++ ++++++
T Consensus        35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse  114 (425)
T PRK09264         35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN  114 (425)
T ss_pred             eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence            35678899997763  3344 46888888876 22 111    122333456667777654211  22 5656 589999


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHC----------CC---eEEEecCCCCC---CCCHHHHHHHhhc---
Q 014492          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN----------GA---AVVKVPRKSDF---SLNVELIADAVER---  216 (423)
Q Consensus       158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~----------g~---~~~~v~~~~~~---~~d~~~l~~~i~~---  216 (423)
                      |++.+++...  ....+|+....+|++....+-..          +.   .+..+|.+..+   .-|++++++.+.+   
T Consensus       115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~  194 (425)
T PRK09264        115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS  194 (425)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence            9999988432  22367888888887554332211          11   23444432111   1267888888753   


Q ss_pred             --CCceEEEEcCCCCCcCcC-CCHHHHHHHH---cC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcc
Q 014492          217 --EKPKCIFLTSPNNPDGSI-INDEDLLKIL---EM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       217 --~~~~~i~l~~p~NPtG~~-~~~~~l~~i~---~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~  287 (423)
                        +++.+|++.......|.+ .+.+.+++|.   +. |+++|+||+|..|...+...  ...+..+.+   .+++|.++.
T Consensus       195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi---~t~~K~l~~  271 (425)
T PRK09264        195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDI---VTLSKSISG  271 (425)
T ss_pred             CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCE---EEeccccCC
Confidence              246788888777777874 5565555554   44 99999999998775433221  111222332   366899985


Q ss_pred             cCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCC-eecC
Q 014492          288 AGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFL-NPYP  360 (423)
Q Consensus       288 ~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~p  360 (423)
                      .|+++|++++++++ ..+..  ....|+.++++..++.++++....-....++++++.+++.+.|++    .+.+ ...+
T Consensus       272 ~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vr  350 (425)
T PRK09264        272 YGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVR  350 (425)
T ss_pred             CccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecce
Confidence            59999999999886 33322  122366777777777666632100113455555555555555543    3322 2234


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.|.++++.+++......+.+.+.++||.+.+.+..  ...||+++....+.+++.+++++|
T Consensus       351 g~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~l  410 (425)
T PRK09264        351 GRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDIL  410 (425)
T ss_pred             ecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHHH
Confidence            568888999975445678888899999999875422  367888865322234555555443

>PRK06541 hypothetical protein; Provisional

Probab=99.74  E-value=4.6e-15  Score=148.25  Aligned_cols=323  Identities=17%  Similarity=0.185  Sum_probs=200.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-CCC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQL-KFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.+||+..+.  ..++ .+|++.+|+.+. ...     ..|+.+...++-+.+++..+-..+.++++++++++++.
T Consensus        48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~  127 (460)
T PRK06541         48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVES  127 (460)
T ss_pred             eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHH
Confidence            34578899997762  3344 368888888762 211     12344445567777777764334689999999999999


Q ss_pred             HHHHhcC-------C-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCC-----CCCC--------H
Q 014492          162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSLN--------V  207 (423)
Q Consensus       162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~-----~~~d--------~  207 (423)
                      +++....       + ..+|+...-+|++....+.. .|            ..+..+|.++.     +.-+        +
T Consensus       128 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (460)
T PRK06541        128 AWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA  207 (460)
T ss_pred             HHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHH
Confidence            9884321       1 36788888888754433221 11            11233332211     1122        3


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      +.+++.+.+   .++.+|++...+++.|.+.+    .+++.++|+. |+++|+||+|..|...+..  ....+..+.++ 
T Consensus       208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDiv-  286 (460)
T PRK06541        208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDII-  286 (460)
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEE-
Confidence            667777752   34556666565899999988    6667777776 9999999999777432222  11122223333 


Q ss_pred             EccChhhhcccCc-cccccccCHHHHHHHHHhc------CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAK------QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLL  350 (423)
Q Consensus       278 i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L  350 (423)
                        +++|.++ .|+ ++|++++++++++.+....      ..++.++++.+++.+.|+.-+ -+...++++++.+++.+.|
T Consensus       287 --t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~-~~~~~~~~~~~g~~l~~~L  362 (460)
T PRK06541        287 --TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE-REGLLDHVRDNEPAFRATL  362 (460)
T ss_pred             --Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHH
Confidence              4899998 887 9999999999988775321      245678888888877775311 1245567777777777777


Q ss_pred             ccC---CCCeecCCCceEEEEEeCCC------CC-------H-HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492          351 KDV---PFLNPYPSYSNFILCEVTSG------MD-------A-KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE  410 (423)
Q Consensus       351 ~~~---~~~~~~p~~~~~~~~~~~~~------~~-------~-~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~  410 (423)
                      +++   +.+....+.|.++.+++.+.      .+       . ..+.+.|.++||++.+..  .+.+.+||+..   +.+
T Consensus       363 ~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~g~~~lrl~Ppl~~t~~  440 (460)
T PRK06541        363 EKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD--RGDPVVQLAPPLISGQE  440 (460)
T ss_pred             HHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC--CCCCEEEEECCCCCCHH
Confidence            665   32222446677777776321      00       0 246677889999998732  12468999976   344


Q ss_pred             hHHHHHHHHh
Q 014492          411 HTDALMECLM  420 (423)
Q Consensus       411 ~~~~l~~al~  420 (423)
                      +.+++.++++
T Consensus       441 ~id~~~~~l~  450 (460)
T PRK06541        441 EFDEIEQILR  450 (460)
T ss_pred             HHHHHHHHHH
Confidence            4444444443

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.73  E-value=9.4e-15  Score=141.76  Aligned_cols=312  Identities=13%  Similarity=0.125  Sum_probs=200.6

Q ss_pred             eeEcCCCCCCCCCCHHHHHH-HhcCCCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           97 IVKIDANENPYGPPPEVREA-LGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~a-l~~~~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      +|||-+   +.++ +.+.++ +..+..+ ..| +++...+|++++++++|.  +.++.+++++.+++++....++|||.|
T Consensus        40 ~iDLlt---DsgT-~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~--~~av~v~sGT~Al~ll~~l~l~pGDeV  113 (450)
T TIGR02618        40 YIDLLT---DSGT-NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGF--KYVVPTHQGRGAENLLSQIAIKPGDYV  113 (450)
T ss_pred             EEEccc---CCCc-HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHHHHhCCCCcCEE
Confidence            466643   2222 555555 5554322 347 677889999999999996  469999999999998887778999977


Q ss_pred             EEcCCCch-hhHHHHHHCCCeEEEecC----------CCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCc-CcCCCHH
Q 014492          174 VDCPPTFT-MYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDE  238 (423)
Q Consensus       174 l~~~p~y~-~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~~  238 (423)
                        ++++|. .........|+..+.++.          +.++.+|++++++.+++.   ++++|.+.+++|-. |.++|.+
T Consensus       114 --psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~  191 (450)
T TIGR02618       114 --PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMA  191 (450)
T ss_pred             --CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHH
Confidence              667774 444446778988777743          235788999999999742   45577888888854 8998875


Q ss_pred             HHHH---HHcC-CCEEEEccCCcc----cc------CCCchh----hhhccCCcEEEEccChhhhccc-Cccccccc-cC
Q 014492          239 DLLK---ILEM-PILVVLDEAYTE----FS------GLESRM----EWVKKHDNLIVLRTFSKRAGLA-GLRVGYGA-FP  298 (423)
Q Consensus       239 ~l~~---i~~~-~~~li~Deay~~----~~------~~~~~~----~~~~~~~~~i~i~S~SK~~g~~-G~R~G~i~-~~  298 (423)
                      ++++   +|+. |+.||+|.++..    |.      +.+..+    .....+. ..++.|..|.++.+ |   |+++ .+
T Consensus       192 ~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~a-D~~~~S~~Kd~~~~~G---G~l~~~d  267 (450)
T TIGR02618       192 NMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYA-DGCTMSGKKDCLVNIG---GFLCMND  267 (450)
T ss_pred             HHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccC-cEEEEeeccCCCCCCc---eEEEeCC
Confidence            5555   5554 999999999864    11      111111    1111122 24777888987665 5   6666 47


Q ss_pred             HHHHHHHHHhcCCC-------CCcHHHHHHHHHHhCChHHHH-HHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492          299 LSIIEYLWRAKQPY-------NVSVAAEVAACAALQNPIYLE-KVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV  370 (423)
Q Consensus       299 ~~~~~~l~~~~~~~-------~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~  370 (423)
                      +++++++++....+       .++.-...++..+|.+  .++ ...++-..+.++|.+.|.+.+.-.+.|.+|+.++++.
T Consensus       268 ~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e--~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda  345 (450)
T TIGR02618       268 DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIRE--AVDYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDA  345 (450)
T ss_pred             HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEh
Confidence            88888888764332       2233333344444432  222 2222233356778888887753335788899898865


Q ss_pred             CC--------CCCHHHHHHHHH-hCCcEEEe-CCC-----C-------CCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492          371 TS--------GMDAKKLKDDLA-KMGVMIRH-YNN-----K-------ELKGYVRVSVG----KPEHTDALMECLMHL  422 (423)
Q Consensus       371 ~~--------~~~~~~l~~~L~-~~gI~v~~-~~~-----~-------~~~~~iRis~~----~~~~~~~l~~al~~l  422 (423)
                      ..        ...+..+...|- +.||--.. |+.     +       ..-..+|+++.    +..+++.+.+++..+
T Consensus       346 ~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~  423 (450)
T TIGR02618       346 RRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKL  423 (450)
T ss_pred             HHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHH
Confidence            31        335777877775 78876542 111     0       01257999975    456678888887765

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.73  E-value=3e-15  Score=147.05  Aligned_cols=256  Identities=15%  Similarity=0.013  Sum_probs=178.4

Q ss_pred             HHHHHHHHHHhCCCC-CcEEEeCCHH-HHHHHHHHHhcC---CCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCC
Q 014492          132 RRLRAALAKDSGLES-DHILVGCGAD-ELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDF  203 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~-~~i~~t~G~~-~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~  203 (423)
                      .++++.+++++|++. +..++++|++ .++.+++.++-.   +||.|+++.-+|......+...|++++.++.   ++++
T Consensus       108 ~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~  187 (444)
T TIGR03531       108 NKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDEL  187 (444)
T ss_pred             HHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCC
Confidence            478888888899852 4577888888 577777776542   5899999999999999999999999999994   4678


Q ss_pred             CCCHHHHHHHhhcC--CceEEEEcCCC-CCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEE
Q 014492          204 SLNVELIADAVERE--KPKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV  277 (423)
Q Consensus       204 ~~d~~~l~~~i~~~--~~~~i~l~~p~-NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~  277 (423)
                      .+|++++++++++.  +..++++++|+ +++|..-+.++|.++|+. |+++|+|++|+.........  .......-.++
T Consensus       188 ~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~v  267 (444)
T TIGR03531       188 TTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAV  267 (444)
T ss_pred             CcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCeE
Confidence            99999999999731  55677776664 566678889999999987 99999999998533110000  11111122577


Q ss_pred             EccChhhhcccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCC-
Q 014492          278 LRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVP-  354 (423)
Q Consensus       278 i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-  354 (423)
                      +.|++|.+.++|. .|.++. ++++++.+.........+.+.+.+...++.. .++++++.++..++++++.+.|+++. 
T Consensus       268 v~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~  346 (444)
T TIGR03531       268 VSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAE  346 (444)
T ss_pred             EEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8899999987776 344446 7788887776533333445666666666654 46788899999999999999987652 


Q ss_pred             --CCeecCCCceEEE--EEeC--CCCCHHHHHHHHHhCCc
Q 014492          355 --FLNPYPSYSNFIL--CEVT--SGMDAKKLKDDLAKMGV  388 (423)
Q Consensus       355 --~~~~~p~~~~~~~--~~~~--~~~~~~~l~~~L~~~gI  388 (423)
                        +..+.....|-+.  +.+.  .+.+...+-..|..++|
T Consensus       347 ~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v  386 (444)
T TIGR03531       347 RHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRV  386 (444)
T ss_pred             hhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCC
Confidence              1233333233222  2221  24467777787876666

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.72  E-value=6.1e-16  Score=148.83  Aligned_cols=303  Identities=18%  Similarity=0.151  Sum_probs=183.3

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccc-hHH----HHHHHHHHhCCCCC----cEEEeCCHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRR----LRAALAKDSGLESD----HILVGCGADE  157 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~------~~g-~~~----lr~~ia~~~g~~~~----~i~~t~G~~~  157 (423)
                      +-|.|-..||..  +|.+++++...   .+..+||      ... ..+    .++.+.+.|+.+++    +|-.-+|+ .
T Consensus        21 ~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs-~   97 (399)
T PF00464_consen   21 STLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGS-Q   97 (399)
T ss_dssp             HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHH-H
T ss_pred             cCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCch-H
Confidence            348888888866  58888888762   2222333      211 122    44555667898844    55555555 5


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHH---HH-------HHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEF---DA-------AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS  226 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~-------~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (423)
                      |...++.+|++|||+|+..++.+.++..   ..       .....+.+.++.+ +++.+|.+++++.+.+.+||+|++..
T Consensus        98 An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~  177 (399)
T PF00464_consen   98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGA  177 (399)
T ss_dssp             HHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-
T ss_pred             HHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECc
Confidence            7788888899999999988877643321   11       1123467777765 67899999999999888999999864


Q ss_pred             CCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccC------
Q 014492          227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP------  298 (423)
Q Consensus       227 p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~------  298 (423)
                      -+.|  ..++.+++++||+. |.+|+.|-+|.... -++.....+ .+ ..++.+|.+|+|  +|-|-|.|+.+      
T Consensus       178 S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~-~~-ADvvt~sThKtl--~GPrggiI~~~~~~~~~  251 (399)
T PF00464_consen  178 SSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF-PY-ADVVTGSTHKTL--RGPRGGIILTNKGSKNV  251 (399)
T ss_dssp             SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC-CT-SSEEEEESSGGG---SSS-EEEEES-SEEEE
T ss_pred             hhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCcc-cc-ceEEEeeccccc--cccCceEEEEcCCcccc
Confidence            4443  66889999999997 99999999996422 122111122 12 238889999986  78899999999      


Q ss_pred             --------HHHHHHHHHhcCCCCC---cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCce
Q 014492          299 --------LSIIEYLWRAKQPYNV---SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSN  364 (423)
Q Consensus       299 --------~~~~~~l~~~~~~~~~---~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~  364 (423)
                              +++.+++.+...+...   ..-..++...+|..  ....++..+++.++.+.|.+.|.+.++-.+. .....
T Consensus       252 ~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H  331 (399)
T PF00464_consen  252 DKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNH  331 (399)
T ss_dssp             -TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSS
T ss_pred             CCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCC
Confidence                    8889999887766432   22222222233322  2235788888999999999999998754332 23446


Q ss_pred             EEEEEeCC-CCCHHHHHHHHHhCCcEEEe----CCC-CCCCCeEEEEec
Q 014492          365 FILCEVTS-GMDAKKLKDDLAKMGVMIRH----YNN-KELKGYVRVSVG  407 (423)
Q Consensus       365 ~~~~~~~~-~~~~~~l~~~L~~~gI~v~~----~~~-~~~~~~iRis~~  407 (423)
                      .+++++.. +.+..+..+.|.+.||.+..    ++. +.....|||+..
T Consensus       332 ~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~  380 (399)
T PF00464_consen  332 QVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTP  380 (399)
T ss_dssp             EEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESH
T ss_pred             eEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCH
Confidence            67889853 67888888999999999974    332 223568999863

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.72  E-value=7.8e-15  Score=146.03  Aligned_cols=320  Identities=18%  Similarity=0.163  Sum_probs=198.9

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      ..+++.++|+..+.  ..++ .+|++.+++.+ +...     ..|+.+...+|-+.|++..+-. .+.++++++++++++
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e  129 (441)
T PRK05769         50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNE  129 (441)
T ss_pred             eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence            35678899997773  3344 36888888876 2211     1233444566777777776422 368999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCCCC-----C--------CHHHHH
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS-----L--------NVELIA  211 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~-----~--------d~~~l~  211 (423)
                      .+++...  ...++|+...-+|++....+-. .|.             .+..+|.++.+.     -        +++.++
T Consensus       130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le  209 (441)
T PRK05769        130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE  209 (441)
T ss_pred             HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence            9988432  2236788888888755533322 111             123333221111     1        123455


Q ss_pred             H-Hhh----cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEc
Q 014492          212 D-AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (423)
Q Consensus       212 ~-~i~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~  279 (423)
                      + .++    ..++.+|++...+...|.+.+    .+++.++|+. |+++|+||++..|...+..  ....+..+.++   
T Consensus       210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv---  286 (441)
T PRK05769        210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII---  286 (441)
T ss_pred             HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE---
Confidence            5 222    246788888877777899888    7777788876 9999999999976543321  11222223333   


Q ss_pred             cChhhhcccCccccccccCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CC
Q 014492          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VP  354 (423)
Q Consensus       280 S~SK~~g~~G~R~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~  354 (423)
                      +++|.++ .|+++|++++++++.+.... ....|+.+++++.++.++|+.-+-  ...++.+++-++|.+.|++    .+
T Consensus       287 t~~K~l~-~G~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~  363 (441)
T PRK05769        287 TLAKAIA-GGLPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLEELEE--GLLENAQKLGEYLRKELKELKEKYE  363 (441)
T ss_pred             EEccccc-CCcccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            4789998 78999999999888753321 123466788888888888864322  4555666666666666654    44


Q ss_pred             CCeecCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          355 FLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       355 ~~~~~p~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      .+.-....|.++.+.+.+.      .....+.+.+.++||++.+.+    .+.+|++..   +.++++++.++++
T Consensus       364 ~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~  434 (441)
T PRK05769        364 FIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG----KSAIRIIPPLIITEEEADIGLEILE  434 (441)
T ss_pred             CeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            3333345677777777421      123457777889999997643    368999976   3444554444443

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.71  E-value=9.7e-15  Score=147.02  Aligned_cols=320  Identities=15%  Similarity=0.167  Sum_probs=196.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C--CC---CCCcchHHHHHHHHHHh-CCCCCcEEEeCCHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDS-GLESDHILVGCGADELI  159 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~~---Y~~~g~~~lr~~ia~~~-g~~~~~i~~t~G~~~al  159 (423)
                      +.+++.+||+..+.  ..++ .+|+|.+|+.+ +.. .  +.   ++.....+|.+.|.+.+ +.+.+.+++++++++|+
T Consensus        85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~  164 (504)
T PLN02760         85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN  164 (504)
T ss_pred             ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence            35678899998752  3343 46888888876 321 1  11   12223456777777764 33346799999999999


Q ss_pred             HHHHHHhc------C-CC-CeEEEcCCCchhhHHHH-HHCCCe------------EEEecCCCCCC-------------C
Q 014492          160 DLIMRCVL------D-PG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFS-------------L  205 (423)
Q Consensus       160 ~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~-~~~g~~------------~~~v~~~~~~~-------------~  205 (423)
                      +.+++...      . ++ .+|+...-.|+.....+ ...|..            +..++.+..+.             .
T Consensus       165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  244 (504)
T PLN02760        165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR  244 (504)
T ss_pred             HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence            99998552      1 23 57888888887554332 222221            11222111111             0


Q ss_pred             CHHHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcE
Q 014492          206 NVELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNL  275 (423)
Q Consensus       206 d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~  275 (423)
                      ..+++++.+.+   .++.+|++...+...|.+.+    .+++.+||+. |+++|+||++..|...+...  ...+..+. 
T Consensus       245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD-  323 (504)
T PLN02760        245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD-  323 (504)
T ss_pred             HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc-
Confidence            12446666531   35778888877777898888    7888888887 99999999998775333221  11111222 


Q ss_pred             EEEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q 014492          276 IVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERER  345 (423)
Q Consensus       276 i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  345 (423)
                        +.+++|.+| .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+.-+ -+...++.+++-++
T Consensus       324 --ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~-~~~l~~~~~~~g~~  399 (504)
T PLN02760        324 --LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYK-ERNIPEHVNKIAPR  399 (504)
T ss_pred             --EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Confidence              456799987 56 5899999999998877531         2346778998888888876421 11334455555555


Q ss_pred             HHHHHcc---CCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---C
Q 014492          346 LFKLLKD---VPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---K  408 (423)
Q Consensus       346 l~~~L~~---~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~  408 (423)
                      |.+.|++   .+.+.-..+.|.++.+++.+...           ...+.+.+.++||++.+.+     +.+||+..   +
T Consensus       400 l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~lrl~Ppl~it  474 (504)
T PLN02760        400 FQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-----DNIMMSPPLIIT  474 (504)
T ss_pred             HHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-----CEEEEECCCCCC
Confidence            5555544   34332234567777777742111           4457788889999998743     46899965   4


Q ss_pred             hhhHHHHHHHHh
Q 014492          409 PEHTDALMECLM  420 (423)
Q Consensus       409 ~~~~~~l~~al~  420 (423)
                      .++++++.++++
T Consensus       475 ~eeid~~~~~l~  486 (504)
T PLN02760        475 PEEVDELISIYG  486 (504)
T ss_pred             HHHHHHHHHHHH
Confidence            445555555543

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.71  E-value=5.8e-15  Score=137.43  Aligned_cols=317  Identities=17%  Similarity=0.163  Sum_probs=211.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCC------Ccch-H----HHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPES-R----RLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~------~~g~-~----~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +-|.|=..||-.  ++.|.+|+...   .+..+||      ...+ .    -..+...+.||.+..+|...+|++ |...
T Consensus        27 ~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~-AN~a  103 (413)
T COG0112          27 EHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQ-ANQA  103 (413)
T ss_pred             hceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchH-HHHH
Confidence            458888888865  58888888752   2323333      2221 2    234555567899888999999987 5556


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHH---HHCC--CeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.++++|||+|+-.+-.+.++....   ...|  .+++.++.+ ++..+|.|++++.+.+.+||+|+.-.-..  -..+
T Consensus       104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY--~r~i  181 (413)
T COG0112         104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAY--SRPI  181 (413)
T ss_pred             HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECcccc--cccc
Confidence            77779999999998777665433221   1123  356666665 56899999999999889999999743222  3678


Q ss_pred             CHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCC
Q 014492          236 NDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY  312 (423)
Q Consensus       236 ~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~  312 (423)
                      +.+++++|++. |.+|++|-+|... .-++.....+.  ...++.+|.+|+|  +|-|-|.|+++. ++.+++.+...|.
T Consensus       182 d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg  257 (413)
T COG0112         182 DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPG  257 (413)
T ss_pred             CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCc
Confidence            99999999998 9999999999642 22222111111  1348899999986  788999999985 8888888876664


Q ss_pred             CCc-HHH--HHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-EEEEEeC-CCCCHHHHHHHHHh
Q 014492          313 NVS-VAA--EVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-FILCEVT-SGMDAKKLKDDLAK  385 (423)
Q Consensus       313 ~~~-~~~--~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-~~~~~~~-~~~~~~~l~~~L~~  385 (423)
                      ..+ +..  .++-..++..  ..-+++..+++.+|.+.|.+.|.+.++-.+....-+ .+.+++. .+.+.+.....|.+
T Consensus       258 ~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~  337 (413)
T COG0112         258 LQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALER  337 (413)
T ss_pred             cCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHH
Confidence            332 222  1111222221  122577888888999999999998775433322223 4556665 46678888888889


Q ss_pred             CCcEEE----eCCC--CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          386 MGVMIR----HYNN--KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       386 ~gI~v~----~~~~--~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      .||.+.    |++.  +-.+..|||...       .+.+.+++.+.|.+
T Consensus       338 ~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~  386 (413)
T COG0112         338 AGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIAD  386 (413)
T ss_pred             cCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHH
Confidence            999997    3443  344678999852       24456666555543

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.71  E-value=3e-16  Score=143.92  Aligned_cols=272  Identities=21%  Similarity=0.232  Sum_probs=167.1

Q ss_pred             hHHHHHHHHHHh---C---CCCCcEEEeCCHHHHHHHHHHHhcCC--C----CeEEEcCCCchhhHHHHHHCCCeEEEec
Q 014492          131 SRRLRAALAKDS---G---LESDHILVGCGADELIDLIMRCVLDP--G----DKIVDCPPTFTMYEFDAAVNGAAVVKVP  198 (423)
Q Consensus       131 ~~~lr~~ia~~~---g---~~~~~i~~t~G~~~al~~~~~~l~~~--g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~  198 (423)
                      ..+|++.|.+++   |   .+...|++++|++++++.++.+|...  .    -.|+...|.|+.|......+.-......
T Consensus        45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~  124 (363)
T PF04864_consen   45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA  124 (363)
T ss_dssp             -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred             cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence            578999999887   3   24569999999999999999998533  1    3799999999999988765443333332


Q ss_pred             CC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEE
Q 014492          199 RK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (423)
Q Consensus       199 ~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i  276 (423)
                      -| ..|. +      . ....+-+=++|+||||.|.+     .+.+++- +..+|.|-+|.+-.+.+  +..  ..+..|
T Consensus       125 Gda~~~~-~------~-~~~~~~IElVTSPNNPDG~l-----r~~V~~g~~~k~I~D~AYYWPhyTp--I~~--~aD~Di  187 (363)
T PF04864_consen  125 GDASNFK-N------S-DNPSPYIELVTSPNNPDGQL-----REAVLNGSSGKVIHDLAYYWPHYTP--ITA--PADHDI  187 (363)
T ss_dssp             EECCCGT-T--------S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-----S---B--SE
T ss_pred             ccHHhhc-c------C-CCCCCeEEEEeCCCCCcccc-----cchhcCCCCcceeeeeeeecccccc--cCC--CCCCce
Confidence            11 1121 0      0 01244566778999999987     4445554 67789999998655533  222  234559


Q ss_pred             EEccChhhhcccCccccccccC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-----------hHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-----------PIYLEKVKEALIKE  342 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-----------~~~~~~~~~~~~~~  342 (423)
                      .+.|+||.-|-+|.|+||++.. +++.+++.++..  ..+++.=+|.-+...|+.           .+..+--++.++++
T Consensus       188 MLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~R  267 (363)
T PF04864_consen  188 MLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRER  267 (363)
T ss_dssp             EEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHH
T ss_pred             EEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHH
Confidence            9999999999999999999995 566777766543  356777777766666652           13566667888888


Q ss_pred             HHHHHHHHccCCCCe--------------ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec
Q 014492          343 RERLFKLLKDVPFLN--------------PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG  407 (423)
Q Consensus       343 ~~~l~~~L~~~~~~~--------------~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~  407 (423)
                      -++|.+.++.-+...              +......|.|++.... ..++..+.|++.||..+.|..+ ....++|||+-
T Consensus       268 W~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-ed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml  346 (363)
T PF04864_consen  268 WEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-EDEDCYAVLREAKIITRSGVLFGADSRYVRLSML  346 (363)
T ss_dssp             HHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-GGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESS
T ss_pred             HHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-ccccHHHHHHhCCcccCCCCccCCCCCeEEEecc
Confidence            999999987643211              1223457999999732 2245566677999999998874 45789999986


Q ss_pred             Ch-hhHHHHHHHHh
Q 014492          408 KP-EHTDALMECLM  420 (423)
Q Consensus       408 ~~-~~~~~l~~al~  420 (423)
                      .. ++.+.|.+-|.
T Consensus       347 ~~~d~Fd~l~~rL~  360 (363)
T PF04864_consen  347 KRDDDFDQLLERLS  360 (363)
T ss_dssp             S-HHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence            54 44444444443

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PRK07678 aminotransferase; Validated

Probab=99.71  E-value=1.8e-14  Score=143.81  Aligned_cols=325  Identities=15%  Similarity=0.123  Sum_probs=197.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+++.+||+..+.  ..++ .+|++.+|+.+ +..   . ..|+.+...+|-+.+++.++. .+.+++++++++|++.+
T Consensus        43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~A  121 (451)
T PRK07678         43 DIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETA  121 (451)
T ss_pred             eCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHH
Confidence            35678899997763  3344 36888888875 221   1 123444456788888888754 35899999999999999


Q ss_pred             HHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCC---------C---HHH
Q 014492          163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL---------N---VEL  209 (423)
Q Consensus       163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~---------d---~~~  209 (423)
                      ++....       +| .+|+....+|++....+.. .|.            .+..+|.++.+..         |   ++.
T Consensus       122 lklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (451)
T PRK07678        122 FKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKE  201 (451)
T ss_pred             HHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHH
Confidence            885321       23 5788888888755433322 111            1223332111111         1   233


Q ss_pred             HHHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEc
Q 014492          210 IADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (423)
Q Consensus       210 l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~  279 (423)
                      +++.+.   ..++.+|++...+.-.|.+.+    .++++++|+. |+++|.||++..|...+..  ....+..+.++   
T Consensus       202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv---  278 (451)
T PRK07678        202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII---  278 (451)
T ss_pred             HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE---
Confidence            555563   256888998866666787765    3455566665 9999999999887543322  12222233333   


Q ss_pred             cChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHH
Q 014492          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLF  347 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~  347 (423)
                      +++|.+| .| +.+|.+++++++.+.+..        ....|+.++++.+++.+.|+.   ++..++..+.-...++.|.
T Consensus       279 t~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~  357 (451)
T PRK07678        279 TMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLK  357 (451)
T ss_pred             Eeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            4689998 56 699999999999887753        223477889988888888763   2233333333334444444


Q ss_pred             HHHccCCCCeecCCCceEEEEEeCCC---------CCHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEec---ChhhHH
Q 014492          348 KLLKDVPFLNPYPSYSNFILCEVTSG---------MDAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVG---KPEHTD  413 (423)
Q Consensus       348 ~~L~~~~~~~~~p~~~~~~~~~~~~~---------~~~~~l~~~L~~~gI~v~~~~~--~~~~~~iRis~~---~~~~~~  413 (423)
                      +.+++.+.+.-..+.|.++.+.+.+.         .....+...|.++||++.+...  +...+.+||+..   +.++++
T Consensus       358 ~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid  437 (451)
T PRK07678        358 EELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIA  437 (451)
T ss_pred             HHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHH
Confidence            44445554433446677777776311         1135677888899999976432  233478999865   444455


Q ss_pred             HHHHHHh
Q 014492          414 ALMECLM  420 (423)
Q Consensus       414 ~l~~al~  420 (423)
                      ++.++++
T Consensus       438 ~~~~~l~  444 (451)
T PRK07678        438 FIVGTLK  444 (451)
T ss_pred             HHHHHHH
Confidence            5444443

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.70  E-value=2.2e-14  Score=142.98  Aligned_cols=321  Identities=15%  Similarity=0.162  Sum_probs=193.0

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHhCCC--CCc-EEEeCCHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLE--SDH-ILVGCGADEL  158 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Y~~~g~~~lr~~ia~~~g~~--~~~-i~~t~G~~~a  158 (423)
                      +.+++.+||+..+.  ..++ .+|++.+++.+ +..   .+  .++.+...+|-+.+++..+-.  ... ++++++++++
T Consensus        35 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA  114 (442)
T TIGR00709        35 DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA  114 (442)
T ss_pred             eCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence            45678899998774  3333 46888888876 221   11  134444566777777776422  124 5567899999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCCC--------CH----HHHH
Q 014492          159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSL--------NV----ELIA  211 (423)
Q Consensus       159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~--------d~----~~l~  211 (423)
                      ++.+++...  ....+|+....+|+.....+.. .|            ..+..+|.++....        +.    +.++
T Consensus       115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (442)
T TIGR00709       115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE  194 (442)
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence            999988432  2236788888888765544332 22            11233332221111        11    1233


Q ss_pred             HHhhc-----CCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCchhh--hhccCCcEEEEc
Q 014492          212 DAVER-----EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR  279 (423)
Q Consensus       212 ~~i~~-----~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~  279 (423)
                      +.+..     .++.++++...++..|. +.|.+.++++.+   . |+++|.||+|..|...+....  ..+..+.+++  
T Consensus       195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--  272 (442)
T TIGR00709       195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--  272 (442)
T ss_pred             HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--
Confidence            33321     46788888866555565 467777766655   3 999999999998865433222  2222333333  


Q ss_pred             cChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----C
Q 014492          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----V  353 (423)
Q Consensus       280 S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~  353 (423)
                       ++|.++. |+++|+++++++ ++.+..  ....|+.+++++.++.++|+.-+ -+...++.+++.+++.+.|++    .
T Consensus       273 -~gK~l~~-G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~-~~~l~~~~~~~g~~l~~~L~~l~~~~  348 (442)
T TIGR00709       273 -MSKAVGG-GLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWK-DDNLAQNAQERGERITSFLDDMIKEH  348 (442)
T ss_pred             -EcccccC-CcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence             7999984 899999999887 444321  12347789999999998885411 123444555666666666654    4


Q ss_pred             CCCeecCCCceEEEEEeCCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492          354 PFLNPYPSYSNFILCEVTSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM  416 (423)
Q Consensus       354 ~~~~~~p~~~~~~~~~~~~~~--------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~  416 (423)
                      +.+.-..+.|.++.+++.+..              -...+...+.++||++.+...  ..+.+|+...   +.++.+++.
T Consensus       349 ~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~~~~  426 (442)
T TIGR00709       349 PCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--EGEVFRLLCPITIDQEECEEGI  426 (442)
T ss_pred             CCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCCCCHHHHHHHH
Confidence            444334567888877774211              134567777899999976432  2478999876   344444444


Q ss_pred             HHH
Q 014492          417 ECL  419 (423)
Q Consensus       417 ~al  419 (423)
                      +++
T Consensus       427 ~~l  429 (442)
T TIGR00709       427 SRF  429 (442)
T ss_pred             HHH
Confidence            444

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK06062 hypothetical protein; Provisional

Probab=99.70  E-value=2.1e-14  Score=143.18  Aligned_cols=320  Identities=14%  Similarity=0.126  Sum_probs=196.6

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +.+++.+||+..+.  ..++ .+|+|.+++.+ +..    ...|..+...+|-+.|++...-..+.++++++++++++.+
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A  128 (451)
T PRK06062         49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHA  128 (451)
T ss_pred             ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHH
Confidence            45678899998763  3344 46888888876 221    1233444456777888877653346899999999999999


Q ss_pred             HHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-----------eEEEecCCCCCC------CC-------HHHHHHHhh
Q 014492          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-----------AVVKVPRKSDFS------LN-------VELIADAVE  215 (423)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-----------~~~~v~~~~~~~------~d-------~~~l~~~i~  215 (423)
                      ++...  ....+|+....+|+.....+.. .|.           .+..++.+..+.      -|       ++.+++.++
T Consensus       129 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~  208 (451)
T PRK06062        129 VRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE  208 (451)
T ss_pred             HHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence            88432  2236788888888755433322 111           112222111111      12       567777774


Q ss_pred             c---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhh
Q 014492          216 R---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRA  285 (423)
Q Consensus       216 ~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~  285 (423)
                      .   .++.+|++...+...|.+.+    .+++.++|+. |+++|+||++..|...+..  ....+..+.   +.+++|.+
T Consensus       209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PD---i~t~gK~l  285 (451)
T PRK06062        209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPD---LITFAKGV  285 (451)
T ss_pred             hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCC---eeeechhh
Confidence            2   45778888877777898887    6777788886 9999999999987533322  112222233   33579999


Q ss_pred             cccCc-cccccccCHHHHHHHHHh----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHH-----HHHHHHHHccCCC
Q 014492          286 GLAGL-RVGYGAFPLSIIEYLWRA----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKE-----RERLFKLLKDVPF  355 (423)
Q Consensus       286 g~~G~-R~G~i~~~~~~~~~l~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~L~~~~~  355 (423)
                      | .|+ .+|.+++.+++.+.+...    ...|+.++++.+++.+.|+.-+- +...++.++.     ++.|.+..++.+.
T Consensus       286 g-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~G~~~l~~~L~~l~~~~~~  363 (451)
T PRK06062        286 N-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE-EGIVENAARIGAEVLGPGLRELAERHPS  363 (451)
T ss_pred             h-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            8 674 899999999988877532    12467788888888888753110 1123333333     3333333333443


Q ss_pred             CeecCCCceEEEEEeCCC------C--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHH
Q 014492          356 LNPYPSYSNFILCEVTSG------M--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMEC  418 (423)
Q Consensus       356 ~~~~p~~~~~~~~~~~~~------~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~a  418 (423)
                      +.-....|.++.+.+.+.      .        ....+.+.|+++||++.+.     .+.+||+..   +.++.+++.++
T Consensus       364 v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-----~~~lrl~ppl~~t~~eid~~~~~  438 (451)
T PRK06062        364 VGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN-----GNRIHVVPPCTVTEDEVREGLAI  438 (451)
T ss_pred             EEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-----CCEEEEECCccCCHHHHHHHHHH
Confidence            333345677777766311      0        1346778888999998753     257999874   44455554444


Q ss_pred             Hh
Q 014492          419 LM  420 (423)
Q Consensus       419 l~  420 (423)
                      ++
T Consensus       439 l~  440 (451)
T PRK06062        439 LD  440 (451)
T ss_pred             HH
Confidence            43

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.70  E-value=7.5e-15  Score=142.53  Aligned_cols=325  Identities=18%  Similarity=0.162  Sum_probs=206.2

Q ss_pred             CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-C---C-CCCCC-CCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-L---K-FPYIY-PDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~---~-~~~~Y-~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~  160 (423)
                      +..++.+|||.++.+  .++ .+|.|++|+.+ +   . ...+| .....-++-+.+.+.... ..+.+++++++++|++
T Consensus        52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E  131 (447)
T COG0160          52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVE  131 (447)
T ss_pred             eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHH
Confidence            456888999998644  343 47999999876 2   2 22333 223345677777776654 4568999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHH-HHC-------------CCeEEEecCCCCC----CC--------CHHHHHH
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDA-AVN-------------GAAVVKVPRKSDF----SL--------NVELIAD  212 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~-~~~-------------g~~~~~v~~~~~~----~~--------d~~~l~~  212 (423)
                      .+++.-.  .....|+...-+|+.....+ ...             ...++.+|.+..+    ..        ..+.+++
T Consensus       132 ~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~  211 (447)
T COG0160         132 AAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIER  211 (447)
T ss_pred             HHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHH
Confidence            9998431  23467888888886333222 111             1225555532211    11        2344555


Q ss_pred             Hhhc-----CCceEEEEcCCCCCcCcCCCHH-HH---HHHHcC-CCEEEEccCCccccCCCchhhh--hccCCcEEEEcc
Q 014492          213 AVER-----EKPKCIFLTSPNNPDGSIINDE-DL---LKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRT  280 (423)
Q Consensus       213 ~i~~-----~~~~~i~l~~p~NPtG~~~~~~-~l---~~i~~~-~~~li~Deay~~~~~~~~~~~~--~~~~~~~i~i~S  280 (423)
                      .+..     .++.++++...+...|.+.+.+ -+   +++|+. |+++|+||++..|...+..+..  .+..+.++   +
T Consensus       212 ~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDiv---t  288 (447)
T COG0160         212 ALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV---T  288 (447)
T ss_pred             HHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEE---E
Confidence            4432     3588999998899999877554 34   445555 9999999999998865533222  12223333   4


Q ss_pred             ChhhhcccCccccccccCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCC
Q 014492          281 FSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPF  355 (423)
Q Consensus       281 ~SK~~g~~G~R~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~  355 (423)
                      ++|.+| .|+.+|.++..+++.+.... ....|..|+.+.+++.+.|+.-+ -+.+.++.++.-+++.+.|.    +.+.
T Consensus       289 ~aK~ig-~G~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie-~e~L~~~a~~~G~~l~~~L~~l~~~~~~  366 (447)
T COG0160         289 LAKSLG-GGLPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIE-EENLLERAAELGEYLRDRLEELQEKHPL  366 (447)
T ss_pred             eccccc-CCCceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence            789999 69999999999998872221 22337889999999998886311 12344444555555555554    3443


Q ss_pred             CeecCCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          356 LNPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       356 ~~~~p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +--..+-|.++.+++-+.        .-...+.+.+.++|+++..++.  ..+.|||.....-+.++++++++.|
T Consensus       367 IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~--~~nviRi~PPL~is~e~~d~~l~il  439 (447)
T COG0160         367 IGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP--HGNVLRILPPLTISDEELDEGLDIL  439 (447)
T ss_pred             eecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCC--CCcEEEEeCCcccCHHHHHHHHHHH
Confidence            333456788888887521        2256778888999998887662  3579999976433335555555543

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.69  E-value=1e-14  Score=140.99  Aligned_cols=292  Identities=14%  Similarity=0.070  Sum_probs=199.3

Q ss_pred             HHHHHhc--CCCCCCCCCcc--hHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCch-hhH
Q 014492          113 VREALGQ--LKFPYIYPDPE--SRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFT-MYE  184 (423)
Q Consensus       113 v~~al~~--~~~~~~Y~~~g--~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~-~~~  184 (423)
                      ..+++.+  +...|+-|...  ..++++.+.+.++.+.+  -++++.|++.+++.++..++ ++|++|++.. .|. .+.
T Consensus        19 ~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~   97 (374)
T TIGR01365        19 SIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV   97 (374)
T ss_pred             hHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH
Confidence            5677765  23334444432  56788888999997433  36679999999999999999 5888888765 665 334


Q ss_pred             -HHHHHCCC-eEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCC
Q 014492          185 -FDAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGL  262 (423)
Q Consensus       185 -~~~~~~g~-~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~  262 (423)
                       ..++..|+ ++..+..+.+..+|+++++.  .    +.|++++....||+..|.+++.+.. .+.++|+|.+=+.... 
T Consensus        98 ~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~----~~v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~~-  169 (374)
T TIGR01365        98 TDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K----NDVVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFAQ-  169 (374)
T ss_pred             HHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C----CCEEEecCCCchheecccccccccc-CCCcEEEEccchhcCC-
Confidence             77888999 47777766677889999873  1    2367889999999999986544322 3889999998764332 


Q ss_pred             CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------------------------cCCCCCcHH
Q 014492          263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------------------KQPYNVSVA  317 (423)
Q Consensus       263 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------------------------~~~~~~~~~  317 (423)
                      +-...     +-.+++.|-.|++++|+ .+++++.+++.+++....                         ..+++++..
T Consensus       170 ~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~  243 (374)
T TIGR01365       170 DLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSML  243 (374)
T ss_pred             CCChh-----HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHH
Confidence            11111     24578888899998765 256777787777654421                         112345555


Q ss_pred             HHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC----Cce-EEEEEeCCC-C-----C-----HHH
Q 014492          318 AEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSN-FILCEVTSG-M-----D-----AKK  378 (423)
Q Consensus       318 ~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~-~~~~~~~~~-~-----~-----~~~  378 (423)
                      ...++..+|+   .++.++.+.++.+++++.+++.++++++....+.    .++ .+.+.++++ .     +     ..+
T Consensus       244 ~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~  323 (374)
T TIGR01365       244 CVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE  323 (374)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence            6666666664   2235889999999999999999999985554331    222 244566433 3     3     688


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHH
Q 014492          379 LKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECL  419 (423)
Q Consensus       379 l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al  419 (423)
                      +.+.|+++||.+.+|.....+..+||+...   .++++.|.++|
T Consensus       324 ~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l  367 (374)
T TIGR01365       324 LISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWL  367 (374)
T ss_pred             HHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHH
Confidence            999999999999877664446899998653   44444444444

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.69  E-value=1.1e-15  Score=143.51  Aligned_cols=303  Identities=16%  Similarity=0.152  Sum_probs=209.2

Q ss_pred             CCCHHHHHHHhcCCCCCC-----CCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          108 GPPPEVREALGQLKFPYI-----YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       108 ~~~~~v~~al~~~~~~~~-----Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      ++.+.+.+++........     -++. ...++++.+|+++|+ ++.+++.-|- ....+.+.++++||.-|+...-.|.
T Consensus       155 ~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mGf-~TNs~~~p~l~~~gsLIiSDelNHa  232 (519)
T KOG1357|consen  155 PCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-EDAIVFSMGF-ATNSMNIPSLLGKGSLIISDELNHA  232 (519)
T ss_pred             cCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-cceEEEeccc-cccccCcceeecCCcceeeccccch
Confidence            456778888877432211     1222 246899999999996 5788888884 4566777889999999999999999


Q ss_pred             hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc------CC-----ceEEEEc-CCCCCcCcCCCHHHHHHHHcC-CC
Q 014492          182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EK-----PKCIFLT-SPNNPDGSIINDEDLLKILEM-PI  248 (423)
Q Consensus       182 ~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------~~-----~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-~~  248 (423)
                      .+...++..|+.++.+..  +   |.+.||+.+++      ++     -|++++. .-...-|.+..+.++.++.+. ..
T Consensus       233 Si~~GaRLSgAtiRVfkH--N---dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkyka  307 (519)
T KOG1357|consen  233 SLITGARLSGATTRVFRH--N---DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKA  307 (519)
T ss_pred             heeccccccCceEEEEec--C---CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccE
Confidence            999999999999888872  3   34555554432      11     1344443 777889999999999999998 99


Q ss_pred             EEEEccCCccccCCCch-----hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----CCCcHH-H
Q 014492          249 LVVLDEAYTEFSGLESR-----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVA-A  318 (423)
Q Consensus       249 ~li~Deay~~~~~~~~~-----~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~~~~~~-~  318 (423)
                      +++.||+|+-.+.+...     ...++..+.+|.+++|.|+||.+|   ||+.+++++++.++.....    ..+|++ +
T Consensus       308 yl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppva  384 (519)
T KOG1357|consen  308 YLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVA  384 (519)
T ss_pred             EEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHH
Confidence            99999999876643321     223345677899999999999888   9999999999988755432    133443 4


Q ss_pred             HHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492          319 EVAACAALQN------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  392 (423)
Q Consensus       319 ~~a~~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~  392 (423)
                      |.. ...+..      .+..++..+++.+++.+++..|...+++..-......+.+-+-.+..-..+.+.|++++|.+.-
T Consensus       385 qq~-~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVv  463 (519)
T KOG1357|consen  385 QQI-LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVV  463 (519)
T ss_pred             HHH-HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEE
Confidence            433 333332      2456788889999999999999998866544444433322221122345677788877766653


Q ss_pred             --CCC-CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          393 --YNN-KELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       393 --~~~-~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                        +.. +-.++.+|++.+.....|++..+++.
T Consensus       464 vgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~  495 (519)
T KOG1357|consen  464 VGFPATPLLESRARFCLSASHTKEDLDRALEV  495 (519)
T ss_pred             EeCCCchHHHhHHHhhhcccccHHHHHHHHHH
Confidence              333 44567889998865555666665554

>PRK06105 aminotransferase; Provisional

Probab=99.69  E-value=2.7e-14  Score=142.83  Aligned_cols=319  Identities=13%  Similarity=0.126  Sum_probs=193.6

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C--C---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ..+++.+||+..+.  ..++ .+|++.+|+.+ +.. .  .   .|..+...++-+.|++.++-+.+.++++++++++++
T Consensus        44 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve  123 (460)
T PRK06105         44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND  123 (460)
T ss_pred             ECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence            45678899998763  3343 46888888876 221 1  1   133333456778888877544468999999999999


Q ss_pred             HHHHHhc------C-CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCC-------------C
Q 014492          161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-------------N  206 (423)
Q Consensus       161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-------------d  206 (423)
                      .+++...      . +| .+|+...-+|+.....+-. .|.            .+..+|.++.+..             .
T Consensus       124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  203 (460)
T PRK06105        124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL  203 (460)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence            9998532      1 22 5788888888654432211 110            1222222111111             1


Q ss_pred             HHHHHHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEE
Q 014492          207 VELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLI  276 (423)
Q Consensus       207 ~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i  276 (423)
                      .+++++.+.   ..++.+|++...+...|.+.+    .+++++||+. |+++|+||++..|...+...  ...+..+.  
T Consensus       204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PD--  281 (460)
T PRK06105        204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPD--  281 (460)
T ss_pred             HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCC--
Confidence            355676663   246788888877777788776    5566677766 99999999998775322221  11222233  


Q ss_pred             EEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL  346 (423)
Q Consensus       277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l  346 (423)
                       +.+++|.++ .| +.+|.+++++++.+.+...         ...++.++++..++.+.|+.-+ -++..++.++..++|
T Consensus       282 -i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~-~~~l~~~v~~~g~~l  358 (460)
T PRK06105        282 -ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIE-ERDLVGNAAERGARL  358 (460)
T ss_pred             -eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHH
Confidence             335789988 56 6899999999998877532         2346788888888877775311 012334444444444


Q ss_pred             HHHHc---cCCCCeecCCCceEEEEEeCCCC------C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492          347 FKLLK---DVPFLNPYPSYSNFILCEVTSGM------D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP  409 (423)
Q Consensus       347 ~~~L~---~~~~~~~~p~~~~~~~~~~~~~~------~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~  409 (423)
                      .+.|+   +.+.+.-..+.|.+..+++....      +     ...+...+.++||++.+.+     +.+||+..   +.
T Consensus       359 ~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it~  433 (460)
T PRK06105        359 QARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-----DTLAFCPPLIITA  433 (460)
T ss_pred             HHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCCccCH
Confidence            44444   34443334466777777763110      1     2467777889999998742     58999865   44


Q ss_pred             hhHHHHHHHH
Q 014492          410 EHTDALMECL  419 (423)
Q Consensus       410 ~~~~~l~~al  419 (423)
                      ++.+++.+.+
T Consensus       434 ~eid~~~~~l  443 (460)
T PRK06105        434 AQVDEMVDRF  443 (460)
T ss_pred             HHHHHHHHHH
Confidence            4444444444

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.68  E-value=1e-13  Score=137.71  Aligned_cols=319  Identities=15%  Similarity=0.101  Sum_probs=194.6

Q ss_pred             CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      ..+++.+||+..+..  .++ .+|++.+++.+ +...  ..++.+...++-+.+.+... ..+.++++++++++++.+++
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk  127 (428)
T PRK12389         49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIR  127 (428)
T ss_pred             eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHH
Confidence            355788999977633  344 36888888876 3221  23455455677788877765 35789999999999999988


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHHHH-CCCeEE--------Eec--CCCC----CCCCHHHHHHHhhc--CCceEEEEc
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDAAV-NGAAVV--------KVP--RKSD----FSLNVELIADAVER--EKPKCIFLT  225 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~--------~v~--~~~~----~~~d~~~l~~~i~~--~~~~~i~l~  225 (423)
                      ...  ....+|+...-+|+.....+.. .|....        .++  ..++    ...|++.+++.+.+  .++.+|++.
T Consensus       128 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E  207 (428)
T PRK12389        128 VARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE  207 (428)
T ss_pred             HHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence            432  1236788888888765433322 221111        000  0000    01268889888853  357788888


Q ss_pred             CCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       226 ~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      ......|.+.+    .+++.++|+. |+++|+||++..|..... .....+..+.+   -+++|.+| .|+.+|.+++++
T Consensus       208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDi---vt~gK~lg-gG~Pi~av~~~~  283 (428)
T PRK12389        208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDL---TALGKIIG-GGLPIGAYGGRK  283 (428)
T ss_pred             CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCe---eeechhhc-CCCceeEEeEHH
Confidence            77787898887    6777888876 999999999997732111 11122222333   36799997 789999999999


Q ss_pred             HHHHHHHH-----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCe-ecCCCceEEEEE
Q 014492          300 SIIEYLWR-----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLN-PYPSYSNFILCE  369 (423)
Q Consensus       300 ~~~~~l~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~-~~p~~~~~~~~~  369 (423)
                      ++.+.+..     ....|+.++++.+++.+.|+.-+- +...++.+++-+++.+.|+    +.+.+. +....+ ++.+.
T Consensus       284 ~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~  361 (428)
T PRK12389        284 DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ-EGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVY  361 (428)
T ss_pred             HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEE
Confidence            99887742     123467888888888877753110 1233444445555555554    345332 223344 33344


Q ss_pred             eCC-CC---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          370 VTS-GM---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       370 ~~~-~~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      +.. ..         +   ...+.+.|.++||++.+...    +.+.+++. +.++.+++.++++
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~~l~~t~e~id~~~~~l~  422 (428)
T PRK12389        362 FTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY----EAWFLTTAHTEEDIEETLEAVD  422 (428)
T ss_pred             EeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC----CCeeecCCCCHHHHHHHHHHHH
Confidence            421 10         1   35677888899999987532    22345543 3444555555554

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.68  E-value=9.4e-15  Score=141.40  Aligned_cols=300  Identities=15%  Similarity=0.182  Sum_probs=195.3

Q ss_pred             CCCCCeeEcCCCC--CCCCC-CHHHHHHHhc-CC---C-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYGP-PPEVREALGQ-LK---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~~-~~~v~~al~~-~~---~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+++.++|+..+.  ..++. +|++.+++.+ +.   + ...|+.....++.+.++++.+.  +.++++++++++++.++
T Consensus        21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~SGseA~e~Al   98 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNY--EYVYMGNSGTEAVEAAL   98 (364)
T ss_pred             CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCC--CEEEEeCchHHHHHHHH
Confidence            4577899997763  44543 5888888876 22   1 1235555567888999988764  58999999999999999


Q ss_pred             HHhc-CCC-CeEEEcCCCchhhHHHHHHC-C-------Ce-----EEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492          164 RCVL-DPG-DKIVDCPPTFTMYEFDAAVN-G-------AA-----VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN  228 (423)
Q Consensus       164 ~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g-------~~-----~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (423)
                      +... -.| ++|+....+|+.....+-.. +       ..     +..+|     ..|++.+++.+. .++++|++...+
T Consensus        99 klar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~-~~~aAvivEpi~  172 (364)
T PRK04013         99 KFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP-----FNDVEAAKEAIT-KETAAVIFEPIQ  172 (364)
T ss_pred             HHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec-----CCCHHHHHHHhc-CCcEEEEEcCCc
Confidence            8542 234 78999999897654333221 1       11     12222     126889999886 689999998777


Q ss_pred             CCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          229 NPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       229 NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      ...|... +   .++++++|+. |+++|+||++..+ ..+...  ...+..+++++   ++|.+| .|+.+|.++.+.++
T Consensus       173 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~---~gK~lg-gG~P~~a~~~~~~~  247 (364)
T PRK04013        173 GEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVT---MGKGIG-NGVPVSLTLTNFDV  247 (364)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEE---eccccc-CCceeEEEEecccc
Confidence            7667655 5   5667777876 9999999999977 333322  22233344443   589998 68999988887665


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHH
Q 014492          302 IEYLWRAKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKK  378 (423)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~  378 (423)
                      ..  ......|+.++++..++.+.|+-   ++.+++.++.       + ..+.. +.+.-..+.|.++-+++.+  ....
T Consensus       248 ~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l-~~l~~-~~v~~vRG~Gl~~gve~~~--~~~~  314 (364)
T PRK04013        248 ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------F-IEIKG-ERVVTTRGRGLMIGIVLKK--PVGK  314 (364)
T ss_pred             cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------H-HHhcc-CcceeeeeCcEEEEEEeCC--cHHH
Confidence            21  12234577889988888877753   2333333322       2 22322 3333345678888888852  3567


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          379 LKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       379 l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      +.+.+.++|+++.+.+    .+.+||.....-+.+++.+++++
T Consensus       315 i~~~~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~  353 (364)
T PRK04013        315 YVEELQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSA  353 (364)
T ss_pred             HHHHHHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHH
Confidence            8888999999997643    47899997632222444444443

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.68  E-value=4.7e-14  Score=139.56  Aligned_cols=319  Identities=14%  Similarity=0.156  Sum_probs=195.1

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++.++|+..+.  ..++ .+|++.+|+.+ +..   ..  .+..+...+|-+.+++..+-..+.++++++++++++.
T Consensus        39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~  118 (428)
T PRK07986         39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEV  118 (428)
T ss_pred             eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence            35577899997763  3343 36888888876 221   11  1233334567777777765344789999999999999


Q ss_pred             HHHHhcC------C-CCeEEEcCCCchhhHHHHHHC-CC-------------eEEEecCCC-CC-----CCCHHHHHHHh
Q 014492          162 IMRCVLD------P-GDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKS-DF-----SLNVELIADAV  214 (423)
Q Consensus       162 ~~~~l~~------~-gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~v~~~~-~~-----~~d~~~l~~~i  214 (423)
                      +++....      . ..+|+....+|++....+... +.             .+..+|... .+     .-|++++++.+
T Consensus       119 AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l  198 (428)
T PRK07986        119 AMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLM  198 (428)
T ss_pred             HHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHH
Confidence            9885431      2 367898888887543322211 11             112233111 11     12567787777


Q ss_pred             hc--CCceEEEEcCC-CCCcCcCC-CH---HHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhh
Q 014492          215 ER--EKPKCIFLTSP-NNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       215 ~~--~~~~~i~l~~p-~NPtG~~~-~~---~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~  284 (423)
                      ..  .++.+|++... +.-.|.+. +.   +++.++|+. |+++|+||++..|...+...  ...+..+. ++  +++|.
T Consensus       199 ~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD-i~--t~gK~  275 (428)
T PRK07986        199 AAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD-IL--CLGKA  275 (428)
T ss_pred             HhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC-EE--Eechh
Confidence            52  35667777653 55556544 43   455666665 99999999997764322211  11222233 33  48999


Q ss_pred             hcccC-ccccccccCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC---
Q 014492          285 AGLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV---  353 (423)
Q Consensus       285 ~g~~G-~R~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---  353 (423)
                      ++ .| +.+|.+++++++.+.+...       ...|+.++++.+++.+.|+.-+ -+...++.+++-+++.+.|+++   
T Consensus       276 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~-~~~~~~~~~~~g~~l~~~l~~l~~~  353 (428)
T PRK07986        276 LT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLE-SGDWQQQVAAIEAQLREELAPLRDA  353 (428)
T ss_pred             hh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            97 77 5888889999998887642       2346778888888887775411 0123445555555555555543   


Q ss_pred             CCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492          354 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  419 (423)
Q Consensus       354 ~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  419 (423)
                      +.+.-....|.++.+.+.+......+.+.|.++||++.+.+     +.+|+...   +.++.+++.+++
T Consensus       354 ~~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g-----~~i~~~Ppl~it~~ei~~~~~~l  417 (428)
T PRK07986        354 PMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG-----KLIYLMPPYIILPEQLQRLTAAV  417 (428)
T ss_pred             CCEEeEeccceEEEEEeCCcccHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHHHHHHHHHHH
Confidence            33322345677877888644456788899999999998753     58999865   344444444444

>PRK06149 hypothetical protein; Provisional

Probab=99.68  E-value=2.6e-14  Score=154.87  Aligned_cols=322  Identities=15%  Similarity=0.139  Sum_probs=200.0

Q ss_pred             CCCCCeeEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH-
Q 014492           92 RKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-  165 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~-  165 (423)
                      ..++.++|+.++...++ .+|+|.+++.+ +.   ...+|..+...++.+.+++.+.-..+.+++++++++|++.+++. 
T Consensus       582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklA  661 (972)
T PRK06149        582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLA  661 (972)
T ss_pred             CCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHH
Confidence            45788999988776677 67999988865 22   22234333456788888888743346899999999999999983 


Q ss_pred             --hcCCCCeEEEcCCCchhhHHHHHH-CC-----C--------eEEEecCCCC----CC-CC-----HHHHHHHhh----
Q 014492          166 --VLDPGDKIVDCPPTFTMYEFDAAV-NG-----A--------AVVKVPRKSD----FS-LN-----VELIADAVE----  215 (423)
Q Consensus       166 --l~~~gd~Vl~~~p~y~~~~~~~~~-~g-----~--------~~~~v~~~~~----~~-~d-----~~~l~~~i~----  215 (423)
                        ..+ ...|+...-+|++....+.. .+     .        .+..++..+.    +. .|     .+++++.++    
T Consensus       662 r~~tg-r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  740 (972)
T PRK06149        662 WAASG-RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA  740 (972)
T ss_pred             HHhcC-CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence              333 35677777777643322211 00     0        1222322111    11 11     234333332    


Q ss_pred             -cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch---hhhhccCCcEEEEccChhhhc
Q 014492          216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       216 -~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~g  286 (423)
                       ..++.+|++.......|.+.+    .+++.++|+. |+++|+||++..|...+..   ....+..+.++   +++|.+|
T Consensus       741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv---t~gK~lg  817 (972)
T PRK06149        741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII---TMAKGMG  817 (972)
T ss_pred             cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE---Eeccccc
Confidence             245778888776666788777    6677777776 9999999999777543321   11122223333   6799998


Q ss_pred             ccCccccccccCHHHHHHHHH---hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCeec
Q 014492          287 LAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLNPY  359 (423)
Q Consensus       287 ~~G~R~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~  359 (423)
                       .|+.+|.+++++++.+.+..   ....++.|+++..++.+.|+--+ -+...++.++.-++|.+.|+    +.+.+...
T Consensus       818 -~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~-~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v  895 (972)
T PRK06149        818 -NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLR-EEKLQENARRVGDHLKARLEALADRHPLIGAV  895 (972)
T ss_pred             -CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence             78999999999999887753   12335678888888888875311 01233334444444444443    45544445


Q ss_pred             CCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          360 PSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       360 p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .+.|.++.+++...        .....+++.|+++||++.+.+.  ..+.+||...   +.++.+.+.+++++
T Consensus       896 rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l~~  966 (972)
T PRK06149        896 HGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDMLDR  966 (972)
T ss_pred             eecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence            67788888877311        1145678888899999987542  2468999865   45555555555543

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.68  E-value=3.9e-14  Score=134.20  Aligned_cols=217  Identities=18%  Similarity=0.141  Sum_probs=161.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~  200 (423)
                      ++++|....+++.+++..|.  .+.++.+++..|+..++..++.+|++|++....|......    ...+|++...+.. 
T Consensus        73 r~~nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~-  149 (409)
T KOG0053|consen   73 RSGNPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV-  149 (409)
T ss_pred             cCCCCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-
Confidence            34566678899999999985  3477778888899999999999999999999999754443    3457888888763 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          -|++++++++. +++++|++.+|.||+..+.+++++.++|+. |++||+|+.++..... .++    ..+.+|++.
T Consensus       150 ----~~~~~~~~~i~-~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~-~pL----~lGADIV~h  219 (409)
T KOG0053|consen  150 ----DDLKKILKAIK-ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ-DPL----PLGADIVVH  219 (409)
T ss_pred             ----hhHHHHHHhhc-cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc-Chh----hcCCCEEEE
Confidence                25788999997 589999999999999999999999999998 9999999999855321 122    234569999


Q ss_pred             cChhhhcccC-ccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |.+|.+|--+ +=.|.++.+ +++.+++......  +.+++....-   .+++-..+.-+.++..++...+.+.|++.+.
T Consensus       220 SaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~l---l~Rglktl~lRi~~~~ena~~~A~~Le~~~~  296 (409)
T KOG0053|consen  220 SATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFL---LSRGLKTLHLRINKHSENALKIALLLEAHPK  296 (409)
T ss_pred             eeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHH---HhcCcchhhhhHHHHHHHHHHHHHHhhhCCc
Confidence            9999876322 334677775 7888887766543  5666665543   3344344555556666777777777776654


Q ss_pred             Ce
Q 014492          356 LN  357 (423)
Q Consensus       356 ~~  357 (423)
                      ++
T Consensus       297 v~  298 (409)
T KOG0053|consen  297 VK  298 (409)
T ss_pred             ee
Confidence            43

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.68  E-value=6.3e-14  Score=140.03  Aligned_cols=321  Identities=14%  Similarity=0.156  Sum_probs=194.7

Q ss_pred             CCCCCCeeEcCCC-CCCCC-CCHHHHHHHhc-CC---CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN-ENPYG-PPPEVREALGQ-LK---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        91 ~~~~~~~i~l~~~-~~~~~-~~~~v~~al~~-~~---~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..+++.+||+..+ ...++ .+|+|.+++.+ +.   +. .+|+.+...+|.+.+++.++-..+.++++++++++++.++
T Consensus        68 D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Al  147 (459)
T PRK06082         68 DVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMAL  147 (459)
T ss_pred             ECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHH
Confidence            3457789998633 33355 67889888876 22   11 2345445668888888887633478999999999999998


Q ss_pred             HHhc--CCCCeEEEcCCCchhhHHHHH-HCCC------------eEEEecCCCC----CC-CC------HHHHHHHhhc-
Q 014492          164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKSD----FS-LN------VELIADAVER-  216 (423)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~------------~~~~v~~~~~----~~-~d------~~~l~~~i~~-  216 (423)
                      +...  ....+|+....+|+.....+- ..|.            .+..+|....    +. .|      ++.+++.+.+ 
T Consensus       148 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  227 (459)
T PRK06082        148 KLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE  227 (459)
T ss_pred             HHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence            8432  223678888888875443222 2221            1222331111    10 11      3557777642 


Q ss_pred             CCceEEEEcCCCCCcCcCCC---HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-
Q 014492          217 EKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-  289 (423)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-  289 (423)
                      .++.+|++...++..+.+.+   .+++.++|+. |+++|.||++..|...+..  ....+..+.+++   ++|.+| .| 
T Consensus       228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~---~gKgl~-gG~  303 (459)
T PRK06082        228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC---IGKGLG-GGL  303 (459)
T ss_pred             CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEE---eccccc-CCC
Confidence            35778888766665444566   3566667766 9999999999977543322  122222333333   799998 67 


Q ss_pred             ccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCc
Q 014492          290 LRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYS  363 (423)
Q Consensus       290 ~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~  363 (423)
                      +.+|.++.++++.+....  ....++.++++.+++.+.|+.-+- +...++.+++-++|.+.|++    .+.+.-..+.|
T Consensus       304 ~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G  382 (459)
T PRK06082        304 VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ-EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIG  382 (459)
T ss_pred             CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeecc
Confidence            589999988887644321  113567888888888877753110 12344445555555555543    45443345667


Q ss_pred             eEEEEEeCCCC-----C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          364 NFILCEVTSGM-----D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       364 ~~~~~~~~~~~-----~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      .++.+++....     +   ...+...+.++||++.+..    .+.+|++..   +.++.+++.++++
T Consensus       383 l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~~~~~l~  446 (459)
T PRK06082        383 LLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ----GNVIQLSPPLIITREELTQALAILE  446 (459)
T ss_pred             ceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC----CCEEEEeCCCccCHHHHHHHHHHHH
Confidence            77777774211     1   3456777789999998742    478999965   4445555555444

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.67  E-value=4.4e-14  Score=140.72  Aligned_cols=320  Identities=18%  Similarity=0.184  Sum_probs=199.2

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +.   +..  .+..+...+|-+.+++...-..+.++++++++++++.
T Consensus        45 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~  124 (445)
T PRK09221         45 DADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDT  124 (445)
T ss_pred             eCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34577899997762  3344 46888888775 22   111  2334445567777877765334689999999999999


Q ss_pred             HHHHhc------C-C-CCeEEEcCCCchhhHHHHHHC-C------------CeEEEecCCC-C----CCC--------CH
Q 014492          162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS-D----FSL--------NV  207 (423)
Q Consensus       162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~-~----~~~--------d~  207 (423)
                      +++...      . + ..+|+....+|++....+-.. |            ..+..+|... .    +..        ..
T Consensus       125 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (445)
T PRK09221        125 ALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELA  204 (445)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHH
Confidence            988432      1 1 257888888887544322111 1            1122233211 0    111        13


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      +++++.+..   .++.+|++...+...|.+.+    .+++.++|+. |+++|+||++..|...+..  ....+..+.   
T Consensus       205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PD---  281 (445)
T PRK09221        205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPD---  281 (445)
T ss_pred             HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCC---
Confidence            566666642   45778888887888899888    7788888887 9999999999876532222  112222222   


Q ss_pred             EccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF  347 (423)
Q Consensus       278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~  347 (423)
                      +.+++|.++ .| +.+|.+++++++.+.+..         ....|+.++++..++.+.|+.-+. +...++.+++.+++.
T Consensus       282 i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~-~~l~~~~~~~g~~l~  359 (445)
T PRK09221        282 IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE-EDLFERAAELAPYFE  359 (445)
T ss_pred             EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence            336789987 55 678999999998887642         112466788888877777753211 134556666667777


Q ss_pred             HHHccC---CCCeecCCCceEEEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492          348 KLLKDV---PFLNPYPSYSNFILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM  416 (423)
Q Consensus       348 ~~L~~~---~~~~~~p~~~~~~~~~~~~-----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~  416 (423)
                      +.|+++   +.+.-..+.|.+..+++..     ......+.+.|.++||+++..+     +.+||+..   +.++++++.
T Consensus       360 ~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~lr~~Ppl~~t~~eid~~~  434 (445)
T PRK09221        360 DAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG-----DTIALSPPLIIEKAQIDELV  434 (445)
T ss_pred             HHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC-----CEEEEECCccCCHHHHHHHH
Confidence            766654   3222234456666666632     1124578888889999997643     57999965   444555555


Q ss_pred             HHHh
Q 014492          417 ECLM  420 (423)
Q Consensus       417 ~al~  420 (423)
                      ++++
T Consensus       435 ~~l~  438 (445)
T PRK09221        435 DALG  438 (445)
T ss_pred             HHHH
Confidence            5544

>PRK07046 aminotransferase; Validated

Probab=99.67  E-value=2.2e-13  Score=135.83  Aligned_cols=313  Identities=15%  Similarity=0.134  Sum_probs=192.1

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      ..+++.+||+..+.  ..++ .+|.+.+++.+ +..+  ..++.+...++.+.|++.++  .+.+.++++++|+...+++
T Consensus        71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~Alr  148 (453)
T PRK07046         71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLR  148 (453)
T ss_pred             eCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHH
Confidence            34577899987663  3344 36888888876 3322  23344445678888888775  5789999999999999988


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHHHH--CCCe-----------------EEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDAAV--NGAA-----------------VVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~--~g~~-----------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~  223 (423)
                      ...  ...++|+...-+|++....+-.  .+.+                 +..+|    | -|++.+++.+...++.+|+
T Consensus       149 lAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~vAavi  223 (453)
T PRK07046        149 WARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAALEAALADGDVAAVL  223 (453)
T ss_pred             HHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHHHHHhCCCCeEEEE
Confidence            432  2237788888888765322111  0100                 11111    1 2789999988656788888


Q ss_pred             EcCCCCCcCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492          224 LTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       224 l~~p~NPtG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      +...+...|.+.+.    ++++++|+. |+++|.||++. |..+. ......+..+.++   +++|.+| .|+.+|.+++
T Consensus       224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~PDi~---t~gK~lg-gG~Pi~av~g  298 (453)
T PRK07046        224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPDFL---VVGKPIA-GGVPCAVYGF  298 (453)
T ss_pred             ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCccce---eehhhhc-CCCcceeeee
Confidence            88666556777663    667777876 99999999986 32111 1111122223333   4789998 7999999999


Q ss_pred             CHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492          298 PLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS  363 (423)
Q Consensus       298 ~~~~~~~l~~~-----------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  363 (423)
                      ++++.+.+...           ...|+.++++..++.+.|+.   ++..++..+.-...++.|.+.+++.+........|
T Consensus       299 ~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G  378 (453)
T PRK07046        299 SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG  378 (453)
T ss_pred             hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999887531           12467788888888877653   34444444444444555554444555332222333


Q ss_pred             eEEEEEeCC-C-C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          364 NFILCEVTS-G-M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       364 ~~~~~~~~~-~-~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      ..+.+.+.+ . .         +   ...+...|.++||++.+..     +.++++.. +.++++++.++++
T Consensus       379 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-----~~~~~~p~~t~~did~~~~~~~  445 (453)
T PRK07046        379 ARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFH-----NMMLVCPATTAADVDRLVAAFD  445 (453)
T ss_pred             cEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEeccc-----CcEEEeCCCCHHHHHHHHHHHH
Confidence            344444311 1 0         1   2345667778999998632     45788765 3444555444443

>PRK04311 selenocysteine synthase; Provisional

Probab=99.67  E-value=1.5e-13  Score=136.51  Aligned_cols=301  Identities=19%  Similarity=0.151  Sum_probs=193.5

Q ss_pred             CCHHHHHHHhcCCCCC---CC--C--Ccc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          109 PPPEVREALGQLKFPY---IY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       109 ~~~~v~~al~~~~~~~---~Y--~--~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      .++++.+++.+....+   .|  .  ..+  ...+++.+++++|.+  ..+++++++.++.+++.. +.+||+|+++...
T Consensus        98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e  174 (464)
T PRK04311         98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNA-LAAGKEVIVSRGE  174 (464)
T ss_pred             CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence            4678888887632111   11  1  112  468999999999964  466777777899888875 5789999998764


Q ss_pred             chh------hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCC--cC--cCCCHHHHHHHHcC-CC
Q 014492          180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP--DG--SIINDEDLLKILEM-PI  248 (423)
Q Consensus       180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP--tG--~~~~~~~l~~i~~~-~~  248 (423)
                      +..      +....+..|++++.++.++  ..++++++++++ +++++|++++++||  +|  ...+.+++.++++. |+
T Consensus       175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~-~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi  251 (464)
T PRK04311        175 LVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN-ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL  251 (464)
T ss_pred             hhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC-ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCC
Confidence            431      2335567899999998532  457999999997 68999999999998  34  67899999999997 99


Q ss_pred             EEEEccCCcccc----CC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHH
Q 014492          249 LVVLDEAYTEFS----GL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAE  319 (423)
Q Consensus       249 ~li~Deay~~~~----~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~  319 (423)
                      ++|+|.+.+.+.    ++   .......-..+..+++.|.+|.+|.+  ..|++++++++++++.+  ..+...+.....
T Consensus       252 ~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l  329 (464)
T PRK04311        252 PVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTL  329 (464)
T ss_pred             eEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHH
Confidence            999999643321    10   11111112345679999999987633  58999999999987763  122232333333


Q ss_pred             HHHHHHhC----C-hHH--------HHHHHHHHHHHHHHHHHHHccCC--CC--eecCC-----Cce-------EEEEEe
Q 014492          320 VAACAALQ----N-PIY--------LEKVKEALIKERERLFKLLKDVP--FL--NPYPS-----YSN-------FILCEV  370 (423)
Q Consensus       320 ~a~~~~l~----~-~~~--------~~~~~~~~~~~~~~l~~~L~~~~--~~--~~~p~-----~~~-------~~~~~~  370 (423)
                      .+..+.|.    . ..+        +....++++++.+.+.+.|++..  ..  .+.+.     +|.       -..+.+
T Consensus       330 ~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~  409 (464)
T PRK04311        330 AALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTL  409 (464)
T ss_pred             HHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEE
Confidence            33333332    1 111        23334667778888888887653  11  22221     111       112333


Q ss_pred             -CCCCCHHHHHHHHHhC--CcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhhh
Q 014492          371 -TSGMDAKKLKDDLAKM--GVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMHL  422 (423)
Q Consensus       371 -~~~~~~~~l~~~L~~~--gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~l  422 (423)
                       +++.+..++.+.|++.  .|+.+-     .++.+.+-+.+  +.+.+.+.++++.+
T Consensus       410 ~~~~~~~~~l~~~lr~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~~~~  461 (464)
T PRK04311        410 TPKDRSLEALAARLRLLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAALLEA  461 (464)
T ss_pred             eCCCCCHHHHHHHHhcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHHHHH
Confidence             2356889999999864  455542     24667777653  45667788877654

>PRK12403 putative aminotransferase; Provisional

Probab=99.67  E-value=1.5e-13  Score=137.48  Aligned_cols=321  Identities=15%  Similarity=0.136  Sum_probs=191.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C--CC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ...++.+||+..+.  ..++ .+|+|.+|+.+ +.. .  ..   ++.+...+|.+.+++.++-..+.+++++++++|++
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  129 (460)
T PRK12403         50 DNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE  129 (460)
T ss_pred             eCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            45677899986652  2243 46888888876 221 1  11   12233567888888887644478999999999999


Q ss_pred             HHHHHhc-------CCCC-eEEEcCCCchhhHHHH-HHCCCe-----------EEEecCCCC----CCC--------CHH
Q 014492          161 LIMRCVL-------DPGD-KIVDCPPTFTMYEFDA-AVNGAA-----------VVKVPRKSD----FSL--------NVE  208 (423)
Q Consensus       161 ~~~~~l~-------~~gd-~Vl~~~p~y~~~~~~~-~~~g~~-----------~~~v~~~~~----~~~--------d~~  208 (423)
                      .+++...       ++++ .|+....+|+.....+ ...|..           +..+|.+..    +..        +.+
T Consensus       130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (460)
T PRK12403        130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL  209 (460)
T ss_pred             HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence            9998653       2333 3555566776443222 222211           223331111    111        134


Q ss_pred             HHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492          209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (423)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i  278 (423)
                      .+++.+.+   .++.+|++...+...|.+.+    .+++++||+. |+++|+||++..|...+...  ...+..+.++  
T Consensus       210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv--  287 (460)
T PRK12403        210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL--  287 (460)
T ss_pred             HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE--
Confidence            56555531   45778888877777798887    7778888887 99999999998775433221  2222233333  


Q ss_pred             ccChhhhcccCc-cccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCC---hHHHHHHH-HHHHHHHHHHH
Q 014492          279 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEKVK-EALIKERERLF  347 (423)
Q Consensus       279 ~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~-~~~~~~~~~l~  347 (423)
                       +++|.+| .|+ .+|.+++++++.+.+...      ...|+.++++.+++.+.|+.   ++.+++.. +.-...++.|.
T Consensus       288 -~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~  365 (460)
T PRK12403        288 -SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLR  365 (460)
T ss_pred             -EEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence             3799988 684 899888998888876431      23466888888888887753   22333332 33333344444


Q ss_pred             HHHccCCCCeecCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHH
Q 014492          348 KLLKDVPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTD  413 (423)
Q Consensus       348 ~~L~~~~~~~~~p~~~~~~~~~~~~~------~~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~  413 (423)
                      +..++.+.+.-....|.++.+++...      ..     ...+...+.++||++.+..     +.+|++..   +.++.+
T Consensus       366 ~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~~~l~Ppl~it~~eid  440 (460)
T PRK12403        366 EVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-----GRMIMAPALVAGRAEID  440 (460)
T ss_pred             HHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-----CEEEEECCCCCCHHHHH
Confidence            44444554443456777877777421      01     1234455678999998542     45889876   444555


Q ss_pred             HHHHHHh
Q 014492          414 ALMECLM  420 (423)
Q Consensus       414 ~l~~al~  420 (423)
                      ++.++++
T Consensus       441 ~~~~~l~  447 (460)
T PRK12403        441 ELVDKTR  447 (460)
T ss_pred             HHHHHHH
Confidence            4444443

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.66  E-value=1.1e-13  Score=137.61  Aligned_cols=320  Identities=18%  Similarity=0.187  Sum_probs=196.2

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.++|+..+.  ..++ .+|++.+++.+ +.   +..  .++.+...++-+.+++...-..+.++++++++++++.
T Consensus        42 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~  121 (442)
T PRK13360         42 THDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDT  121 (442)
T ss_pred             eCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34577899997663  3344 46888888875 22   111  2233334567777777764234689999999999999


Q ss_pred             HHHHhcC-------C-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCC-----CCC--------CH
Q 014492          162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSL--------NV  207 (423)
Q Consensus       162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~-----~~~--------d~  207 (423)
                      +++....       + ..+|+....+|++....+-. .|            ..+..+|....     +..        .+
T Consensus       122 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  201 (442)
T PRK13360        122 ALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA  201 (442)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH
Confidence            9884321       2 25799888888765432211 11            11233332110     111        14


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      +.+++.+..   .++.+|++...+...|.+.+    .++++++|+. |+++|+||++..|...+..  ....+..+.   
T Consensus       202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD---  278 (442)
T PRK13360        202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD---  278 (442)
T ss_pred             HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc---
Confidence            567777742   45678888877888899888    7788888886 9999999999776432222  112222222   


Q ss_pred             EccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF  347 (423)
Q Consensus       278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~  347 (423)
                      +.+++|.++ .| +.+|.+++++++.+.+...         ...|+.++++..++.++|+.-+- +...++.+++-+++.
T Consensus       279 ivt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~  356 (442)
T PRK13360        279 LLTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER-EGLLTRAARLAPYWE  356 (442)
T ss_pred             eeeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHH
Confidence            236799987 56 7899999999988776431         12467788888888887753111 134455556666666


Q ss_pred             HHHccC---CCCeecCCCceEEEEEeCC---C--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHH
Q 014492          348 KLLKDV---PFLNPYPSYSNFILCEVTS---G--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALM  416 (423)
Q Consensus       348 ~~L~~~---~~~~~~p~~~~~~~~~~~~---~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~  416 (423)
                      +.|+++   +.+.-..+.|.+..+.+..   +  .....+.+.|.++||++....     +.+||+..   +.++.+++.
T Consensus       357 ~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-----~~lr~~Ppl~~t~~eid~~~  431 (442)
T PRK13360        357 DALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG-----DILALSPPLIIEEAQIDELF  431 (442)
T ss_pred             HHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-----CEEEEeCCCccCHHHHHHHH
Confidence            666543   2222223445555555531   1  124577888889999997643     57999965   344455555


Q ss_pred             HHHh
Q 014492          417 ECLM  420 (423)
Q Consensus       417 ~al~  420 (423)
                      ++++
T Consensus       432 ~~l~  435 (442)
T PRK13360        432 DILA  435 (442)
T ss_pred             HHHH
Confidence            5443

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.66  E-value=2e-13  Score=135.07  Aligned_cols=319  Identities=12%  Similarity=0.141  Sum_probs=194.6

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.++|+..+  ...++ .+|++.+++.+ +.   +..  .+..+...+|.+.+++..+-..+.++++++++++++.
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~  115 (422)
T PRK05630         36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEV  115 (422)
T ss_pred             ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence            3567889999776  33344 36888888876 22   111  1233335578888887764334689999999999999


Q ss_pred             HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCCCCCC-------HHHHHH
Q 014492          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFSLN-------VELIAD  212 (423)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~~d-------~~~l~~  212 (423)
                      +++....       ++ .+|+....+|+.....+-. .+.             ....+|.......+       .+.+++
T Consensus       116 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  195 (422)
T PRK05630        116 AIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLEL  195 (422)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHH
Confidence            9884321       23 5788888888754333221 111             12333322111112       234455


Q ss_pred             HhhcCCceEEEEcCC-CCCcCcCC-CHHHH---HHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhh
Q 014492          213 AVEREKPKCIFLTSP-NNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       213 ~i~~~~~~~i~l~~p-~NPtG~~~-~~~~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~  284 (423)
                      .+. .++.+|++... +.-.|.+. +.+.+   .++|+. |+++|+||++..|...+...  ...+..+.++   +++|.
T Consensus       196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~---t~gK~  271 (422)
T PRK05630        196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM---CVGKA  271 (422)
T ss_pred             HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee---eeech
Confidence            554 57888888863 66678755 44444   455655 99999999998775333221  1122223333   67998


Q ss_pred             hcccC-ccccccccCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc---
Q 014492          285 AGLAG-LRVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD---  352 (423)
Q Consensus       285 ~g~~G-~R~G~i~~~~~~~~~l~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---  352 (423)
                      ++ .| ..+|++++++++.+.+...        ..+|..++++..++.++|+.-+- +...++++++-+++.+.|++   
T Consensus       272 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~-~~~~~~~~~~g~~l~~~L~~l~~  349 (422)
T PRK05630        272 LT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET-GMWRKQVKRIEAELIAGLSPLAH  349 (422)
T ss_pred             hh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhhc
Confidence            86 57 4789999999998877531        24577888888888877754110 12233444444555554443   


Q ss_pred             CCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          353 VPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       353 ~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      .+.+.-....|.++.+++.+..++..+.+.++++||++.+.+     +.+||...   +.++.+++.++++
T Consensus       350 ~~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~g-----~~l~~~PpL~it~~~i~~~~~~l~  415 (422)
T PRK05630        350 LPGVADVRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPFG-----RLVYVMPPYITTSEQIAQICAALA  415 (422)
T ss_pred             CCCeeeeeccccEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHHHHHHHHHHH
Confidence            333332345688888888644456788888999999997642     68999975   4444444444443

>PRK05965 hypothetical protein; Provisional

Probab=99.66  E-value=1.5e-13  Score=137.54  Aligned_cols=320  Identities=15%  Similarity=0.141  Sum_probs=194.3

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CC---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ..+++.+||+..+.  ..++ .+|++.+|+.+ +..   ..   .++.+...+|-+.|++...-..+.++++++++++++
T Consensus        42 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve  121 (459)
T PRK05965         42 DASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD  121 (459)
T ss_pred             ECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence            35677899997663  3333 36888888876 221   11   233333456777887776434568999999999999


Q ss_pred             HHHHHhc------C-C-CCeEEEcCCCchhhHHHHHH-C---------CC---eEEEecCCCC----CCCC--------H
Q 014492          161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-N---------GA---AVVKVPRKSD----FSLN--------V  207 (423)
Q Consensus       161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~---------g~---~~~~v~~~~~----~~~d--------~  207 (423)
                      .+++...      + + ..+|+....+|++....+.. .         |.   .+..+|.+..    +.-|        +
T Consensus       122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (459)
T PRK05965        122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV  201 (459)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence            9998532      1 2 25788888888755432211 1         10   1223332110    1123        2


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCC-CHHHH---HHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~-~~~~l---~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      +.+++.+.+   +++.+|++...+...|.+. +.+-+   +++|+. |+++|.||++..|...+..  ....+..+.+++
T Consensus       202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~  281 (459)
T PRK05965        202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT  281 (459)
T ss_pred             HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence            567777752   4678888887777778765 44444   445555 9999999999988543322  112222333343


Q ss_pred             EccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF  347 (423)
Q Consensus       278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~  347 (423)
                         ++|.++ .| +.+|.+++++++.+.+..         ....|+.++++.+++.+.|+--+ -+...++.++.-+++.
T Consensus       282 ---~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~-~~~l~~~~~~~g~~l~  356 (459)
T PRK05965        282 ---VAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH-EGGLLANGQKAGPRFA  356 (459)
T ss_pred             ---echhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence               589998 78 599999999999887642         12346788898888887775311 1123344444555555


Q ss_pred             HHHcc---CCCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492          348 KLLKD---VPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE  410 (423)
Q Consensus       348 ~~L~~---~~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~  410 (423)
                      +.|++   .+.+.-..+.|.++.+++.+..           -...+.+.+.++||++.+.+    .+.||+...   +++
T Consensus       357 ~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g----~~~i~~~PpL~it~~  432 (459)
T PRK05965        357 AGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG----DGVLGFAPALCCTEG  432 (459)
T ss_pred             HHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC----CcEEEEECCCcCCHH
Confidence            55544   4433334566777777773211           13457777889999998643    467999854   344


Q ss_pred             hHHHHHHHH
Q 014492          411 HTDALMECL  419 (423)
Q Consensus       411 ~~~~l~~al  419 (423)
                      +.+++.+++
T Consensus       433 ei~~~~~~l  441 (459)
T PRK05965        433 EFDLIFERT  441 (459)
T ss_pred             HHHHHHHHH
Confidence            444444444

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.65  E-value=1.9e-13  Score=120.64  Aligned_cols=302  Identities=19%  Similarity=0.207  Sum_probs=207.4

Q ss_pred             CHHHHHHHhcCCCCC---CC---------CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014492          110 PPEVREALGQLKFPY---IY---------PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP  177 (423)
Q Consensus       110 ~~~v~~al~~~~~~~---~Y---------~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~  177 (423)
                      +++.++|+-+...++   .|         .-|-...+.+.+++++|.  |.+-+|+|+.++=..++.+++++||.|++..
T Consensus        30 t~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~--D~~R~t~GARe~KfavMhal~~~gd~vV~D~  107 (382)
T COG1103          30 TEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGM--DEVRVTAGAREAKFAVMHALCKEGDWVVVDS  107 (382)
T ss_pred             CHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCC--ceeeecccchhhHHHHHHHhccCCCEEEEcC
Confidence            577778877642211   01         112245677889999996  5688999999999999999999999999999


Q ss_pred             CCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc------CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CC
Q 014492          178 PTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (423)
Q Consensus       178 p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~------~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~  248 (423)
                      .+|....-+++.+|.++..||.  -+++.++++...+.|++      ..+.+.++++|..--|.+.+...+.+||+. ++
T Consensus       108 ~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gv  187 (382)
T COG1103         108 LAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGV  187 (382)
T ss_pred             cchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCC
Confidence            9987666778889999999993  25678899887777643      247888889999999999999999999998 99


Q ss_pred             EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-C--------CCcHHHH
Q 014492          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-Y--------NVSVAAE  319 (423)
Q Consensus       249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-~--------~~~~~~~  319 (423)
                      +++...+|.....    .-.....+..++++|-+|++. +.-.+|.+....++.+.+.+.... |        ++..-..
T Consensus       188 PlllN~AYt~Grm----pvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGa  262 (382)
T COG1103         188 PLLLNCAYTVGRM----PVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGA  262 (382)
T ss_pred             ceEeecceeeccc----cccccccCCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCc
Confidence            9999999984332    111123345689999999997 556799999999998888766521 2        2221111


Q ss_pred             HHHHHHhCChHHHHHHHHH---HHHHHHHHHHHHccCCCCe---ecCCCceEEEEEeCC--------CCCHHHHHHHHHh
Q 014492          320 VAACAALQNPIYLEKVKEA---LIKERERLFKLLKDVPFLN---PYPSYSNFILCEVTS--------GMDAKKLKDDLAK  385 (423)
Q Consensus       320 ~a~~~~l~~~~~~~~~~~~---~~~~~~~l~~~L~~~~~~~---~~p~~~~~~~~~~~~--------~~~~~~l~~~L~~  385 (423)
                      - ...++.+-.++.++.++   --+..+++.+.|++++++.   ..|.....+.+..|.        ....--+++.|++
T Consensus       263 p-ivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~  341 (382)
T COG1103         263 P-IVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKK  341 (382)
T ss_pred             h-HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHh
Confidence            1 11112222222222222   2345677888999887554   246666566666651        1122346777887


Q ss_pred             CCcEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l  422 (423)
                      +||.-.   .++...++.+|+ + +.++.+.+.++++.|
T Consensus       342 RgI~GI---~~G~Tk~~K~svyGl~~Eqve~V~~afkeI  377 (382)
T COG1103         342 RGIHGI---QPGQTKYFKLSVYGLSWEQVEYVVDAFKEI  377 (382)
T ss_pred             cCcccc---ccCceeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            776422   133467899985 4 456678888887765

>PRK06148 hypothetical protein; Provisional

Probab=99.65  E-value=8.5e-14  Score=151.05  Aligned_cols=323  Identities=14%  Similarity=0.071  Sum_probs=197.3

Q ss_pred             CCCCCeeEcCCCCCCCC-CCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           92 RKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      ..++.++|+..+...+| .+|+|.+|+.+ +.   ....|..+...++-+.+++.+.-..+.++++++++||++.+++..
T Consensus       621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklA  700 (1013)
T PRK06148        621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLA  700 (1013)
T ss_pred             CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHH
Confidence            45788999988766665 36888888876 22   223455555667888888877533468999999999999999843


Q ss_pred             c--CCCCeEEEcCCCchhhHHHHHH-C--------C----CeEEEecCCC----CCCC-C-------HHHHHHHhh----
Q 014492          167 L--DPGDKIVDCPPTFTMYEFDAAV-N--------G----AAVVKVPRKS----DFSL-N-------VELIADAVE----  215 (423)
Q Consensus       167 ~--~~gd~Vl~~~p~y~~~~~~~~~-~--------g----~~~~~v~~~~----~~~~-d-------~~~l~~~i~----  215 (423)
                      .  ....+|+....+|++....+.. .        +    ..+..++..+    .+.. |       .+.+++.+.    
T Consensus       701 r~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~  780 (1013)
T PRK06148        701 RAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAA  780 (1013)
T ss_pred             HHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhc
Confidence            2  1236788888888644322111 1        1    1121222111    1111 1       134554442    


Q ss_pred             -cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc-h--hhhhccCCcEEEEccChhhhc
Q 014492          216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-R--MEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       216 -~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~-~--~~~~~~~~~~i~i~S~SK~~g  286 (423)
                       ..++.+|++.....-.|.+.+    .+++.++|+. |+++|.||++..|...+. .  ....+..+.+   -+++|.+|
T Consensus       781 ~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDi---vt~gK~lg  857 (1013)
T PRK06148        781 KGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDI---VTMGKPIG  857 (1013)
T ss_pred             cCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcce---eeeccccc
Confidence             145788888866666677665    4445556665 999999999988854332 1  1112222333   34689998


Q ss_pred             ccCccccccccCHHHHHHHHH---hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492          287 LAGLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP  360 (423)
Q Consensus       287 ~~G~R~G~i~~~~~~~~~l~~---~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p  360 (423)
                       .|+.+|.+++.+++.+.+..   ....|+.++++.+++.+.|+.   ++..++..+.-...++.|.+..++.+.+.-..
T Consensus       858 -gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~Vr  936 (1013)
T PRK06148        858 -NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVR  936 (1013)
T ss_pred             -CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEe
Confidence             79999999999999887643   224567889988888887753   22333333333333333433333455444345


Q ss_pred             CCceEEEEEeCCCC--------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492          361 SYSNFILCEVTSGM--------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDALMECLM  420 (423)
Q Consensus       361 ~~~~~~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~l~~al~  420 (423)
                      +.|.++.+++....        ....+.+.|+++||++.+.+.  ..+.+||....   .++.+++.++++
T Consensus       937 G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l~ 1005 (1013)
T PRK06148        937 GMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVLD 1005 (1013)
T ss_pred             eeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHHH
Confidence            67888888774211        134577888899999986532  24789998763   444444444443

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.65  E-value=2.8e-13  Score=134.23  Aligned_cols=321  Identities=13%  Similarity=0.145  Sum_probs=197.2

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.++|+..+  ...++ .+|++.+++.+ +.   +..  .|..+...+|-+.+++...-..+.++++++++++++.
T Consensus        40 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~  119 (429)
T PRK06173         40 LKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEV  119 (429)
T ss_pred             cCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHH
Confidence            3457789999765  23333 36888888776 22   111  2344445677888887765345789999999999999


Q ss_pred             HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCC-C-----CCCHHHHHHH
Q 014492          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-F-----SLNVELIADA  213 (423)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~-~-----~~d~~~l~~~  213 (423)
                      +++....       +| .+|+....+|++....+.. .|.             .+..+|.+.. +     .-+++.+++.
T Consensus       120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~  199 (429)
T PRK06173        120 AMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDL  199 (429)
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHH
Confidence            9885431       33 5788888888764322211 110             1222332111 1     0136667777


Q ss_pred             hhc--CCceEEEEcCC-CCCcCcC-CCHHHHHHH---HcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChh
Q 014492          214 VER--EKPKCIFLTSP-NNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSK  283 (423)
Q Consensus       214 i~~--~~~~~i~l~~p-~NPtG~~-~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK  283 (423)
                      +..  .++.+|++... +.-.|.+ .+.+.++++   |+. |+++|+||++..|...+..  ....+..+. ++  +++|
T Consensus       200 i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD-iv--~~gK  276 (429)
T PRK06173        200 LEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD-IM--CIGK  276 (429)
T ss_pred             HHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCC-EE--Eeeh
Confidence            742  46788888863 6767876 466555555   444 9999999999776433322  122222233 33  3899


Q ss_pred             hhcccC-ccccccccCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC--
Q 014492          284 RAGLAG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV--  353 (423)
Q Consensus       284 ~~g~~G-~R~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~--  353 (423)
                      .++ .| +.++.++.++++.+.+..       ...+|..++++.+++.++|+.-+- +...++++++-++|.+.|+++  
T Consensus       277 ~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~~~~  354 (429)
T PRK06173        277 ALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE-SPWQQNIQRIEAQLKQELAPAAE  354 (429)
T ss_pred             hhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhc
Confidence            997 67 478888889998887742       122456788888888887753110 123555666666666666543  


Q ss_pred             -CCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          354 -PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       354 -~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                       +.+.-....|.++.+.+.+..+...+.+.|.++||++.+.+     +.|||.....-+.+++.++++.
T Consensus       355 ~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g-----~~l~~~Ppl~it~~ei~~~~~~  418 (429)
T PRK06173        355 FDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPFG-----KLVYIMPPFIISPDELSQLTSG  418 (429)
T ss_pred             CCCeeeeeccceEEEEEeCCcccHHHHHHHHHHCCeEEEecC-----CEEEEeCCccCCHHHHHHHHHH
Confidence             22221235677887888654556788999999999998753     5899997632223444444443

>PRK07483 hypothetical protein; Provisional

Probab=99.65  E-value=3.1e-13  Score=134.60  Aligned_cols=325  Identities=14%  Similarity=0.168  Sum_probs=192.5

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++.+||+..+  ...++ .+|.+.+++.+ +...     ..|..+...+|.+.|++...-..+.++++++++++++.
T Consensus        26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  105 (443)
T PRK07483         26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEA  105 (443)
T ss_pred             eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHH
Confidence            4567889999876  34444 46888888876 2211     11333344567777777664334689999999999999


Q ss_pred             HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCCCC-----C--------H
Q 014492          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-----N--------V  207 (423)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~~~-----d--------~  207 (423)
                      +++....       +| .+|+...-+|+.....+.. .|-            .+..++....+..     +        +
T Consensus       106 AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (443)
T PRK07483        106 ALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA  185 (443)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH
Confidence            9884321       33 5688888888754332221 110            1122321111110     0        2


Q ss_pred             HHHHHHhh---cCCceEEEEcCCCC-CcCcCCC-HH---HHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEE
Q 014492          208 ELIADAVE---REKPKCIFLTSPNN-PDGSIIN-DE---DLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI  276 (423)
Q Consensus       208 ~~l~~~i~---~~~~~~i~l~~p~N-PtG~~~~-~~---~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i  276 (423)
                      +.+++.+.   ..++.+|++...+. -.|.+.+ .+   .++++|+. |+++|.||++..|...+....  ..+..+.++
T Consensus       186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv  265 (443)
T PRK07483        186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLV  265 (443)
T ss_pred             HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCee
Confidence            56666553   24677888876553 3465554 44   45556665 999999999998854332221  222233333


Q ss_pred             EEccChhhhcccCc-cccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERL  346 (423)
Q Consensus       277 ~i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l  346 (423)
                         +++|.++ .|+ .+|.+++++++.+.+...      ...|+.++++..++.+.|+-   ++.+++..+.-...++.|
T Consensus       266 ---~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L  341 (443)
T PRK07483        266 ---TIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARL  341 (443)
T ss_pred             ---eehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence               3589997 785 999999999998877532      23467788888888877753   333344444334444444


Q ss_pred             HHHHccCCCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---Ch
Q 014492          347 FKLLKDVPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KP  409 (423)
Q Consensus       347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~  409 (423)
                      .+.+++.+.+.-....|.++.+++.+..           ....+.+.+.++||++.+...   ....+.+||...   +.
T Consensus       342 ~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~  421 (443)
T PRK07483        342 RERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITA  421 (443)
T ss_pred             HHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCH
Confidence            4444445544334567777777763210           135677888899999987532   112468999875   34


Q ss_pred             hhHHHHHHHH
Q 014492          410 EHTDALMECL  419 (423)
Q Consensus       410 ~~~~~l~~al  419 (423)
                      ++.+++.+++
T Consensus       422 ~eid~~~~~l  431 (443)
T PRK07483        422 AQIDEIVERL  431 (443)
T ss_pred             HHHHHHHHHH
Confidence            4444444443

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.65  E-value=5e-13  Score=133.38  Aligned_cols=324  Identities=16%  Similarity=0.194  Sum_probs=193.2

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++.+||+..+.  ..++ .+|++.+++.+ +..   . ..| +.+...+|-+.+++..+...+.+++++++++|++.
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~  128 (457)
T PRK05639         49 DVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDM  128 (457)
T ss_pred             eCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            45678899998773  3344 46888888876 221   1 122 23334568888888765444689999999999999


Q ss_pred             HHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCCCCCC--------CCH--------HH
Q 014492          162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS--------LNV--------EL  209 (423)
Q Consensus       162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~~~~~--------~d~--------~~  209 (423)
                      +++...  ....+|+....+|++....+.. .|.             .++.+|.++.+.        .|.        +.
T Consensus       129 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (457)
T PRK05639        129 AIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDY  208 (457)
T ss_pred             HHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHH
Confidence            988432  2336788888888754433222 111             133444221111        122        23


Q ss_pred             HHHHh-----hcCCceEEEEcCCCCCcCcCCC-HHHHHH---HHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          210 IADAV-----EREKPKCIFLTSPNNPDGSIIN-DEDLLK---ILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       210 l~~~i-----~~~~~~~i~l~~p~NPtG~~~~-~~~l~~---i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      +++.+     ...++.+|++...+...|.+.+ .+.+++   +|+. |+++|+||++..|...+..  ....+..+.+++
T Consensus       209 le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~  288 (457)
T PRK05639        209 LENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII  288 (457)
T ss_pred             HHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEE
Confidence            44443     1356888998876766787664 544544   4554 9999999999877533322  112222333333


Q ss_pred             EccChhhhcccCccccccccCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----
Q 014492          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----  352 (423)
Q Consensus       278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----  352 (423)
                         ++|.++ .|+.+|.+++++++.+.... ....+..++++..++.+.|+.-+ -+...++.+++-++|.+.|++    
T Consensus       289 ---~gK~l~-gG~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~~L~~l~~~  363 (457)
T PRK05639        289 ---FGKGVA-SGMGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLEIIE-EENLLKNALKVGEFIKKRLLEMKES  363 (457)
T ss_pred             ---echhhc-CCCcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHHHHHHh
Confidence               799998 78999999999998873211 12245678888777777775411 012233333444444444443    


Q ss_pred             CCCCeecCCCceEEEEEeCCC------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          353 VPFLNPYPSYSNFILCEVTSG------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       353 ~~~~~~~p~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      .+.+.-..+.|.++.+.+...      .....+.+.+.++|+++.+.+  ...+.+||......+.++++++++.
T Consensus       364 ~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g--~~~~~lr~~Ppl~it~~~id~~~~~  436 (457)
T PRK05639        364 FEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYG--MFGNVIRITPPLVITKEIAEKGLEI  436 (457)
T ss_pred             CCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecC--CCCCEEEEeCCCccCHHHHHHHHHH
Confidence            443333456777777776321      124567788889999997653  1247899997643333445554443

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.65  E-value=3.4e-16  Score=146.28  Aligned_cols=251  Identities=22%  Similarity=0.236  Sum_probs=169.4

Q ss_pred             CCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch---hh
Q 014492          109 PPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT---MY  183 (423)
Q Consensus       109 ~~~~v~~al~~~~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~---~~  183 (423)
                      +.|++.+++.+...+ ..| .|+...++++.+++++|.  +..+++++++.+..++++++++|++.|++..++|.   ..
T Consensus         7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~--e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~   84 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGK--EAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET   84 (290)
T ss_dssp             S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred             CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCC--CEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence            678999999765433 358 455688999999999995  35568888999999999999999999999999885   33


Q ss_pred             HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCc-CcCCCHHHHHHHHcC----CCEEEEc
Q 014492          184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLD  253 (423)
Q Consensus       184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~~----~~~li~D  253 (423)
                      .......|.+++.++.+++..+|+++|++.+..     .++++|+|++|+|-. |.+++.+++++|++.    |+.|++|
T Consensus        85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD  164 (290)
T PF01212_consen   85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD  164 (290)
T ss_dssp             THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred             chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence            344456999999999766468999999999975     468999999999953 899999999998875    9999999


Q ss_pred             cCCccccC--CCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC-----CcHHHH-----HH
Q 014492          254 EAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN-----VSVAAE-----VA  321 (423)
Q Consensus       254 eay~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~-----~~~~~~-----~a  321 (423)
                      .+...-.-  .+.....+..+- +++..|++|.+|+++  -+.++++++++++..+.....+     ...++.     .+
T Consensus       165 GARl~~a~~~~~~~~~e~~~~~-D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~  241 (290)
T PF01212_consen  165 GARLANAAAALGVSLAEIAAGA-DSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFA  241 (290)
T ss_dssp             ETTHHHHHCHHHHHHHHHHTTS-SEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHH
T ss_pred             hhhHHHhhhcccccHHHHhhhC-CEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHH
Confidence            99643221  011122222222 255567899888765  2567779997766554432211     112222     12


Q ss_pred             HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEE
Q 014492          322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFIL  367 (423)
Q Consensus       322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~  367 (423)
                      +..+++  .| .....+-.++.++|.+.|+.+++..+.|..++-++
T Consensus       242 ~l~~l~--~~-~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn~~~  284 (290)
T PF01212_consen  242 ALRALE--LW-LERARHANAMAKRLAAGLEALGGVLPRPVETNQVF  284 (290)
T ss_dssp             HHCHEE--CS-HHHHHCHHHHHHCHHHCHHEECEEEETTSS-HHHH
T ss_pred             HHHHHH--hh-HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcEEe
Confidence            223332  23 34445556778899999999887666666555433

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK07482 hypothetical protein; Provisional

Probab=99.65  E-value=2.2e-13  Score=136.35  Aligned_cols=322  Identities=15%  Similarity=0.119  Sum_probs=194.9

Q ss_pred             CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCC---CC---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF---PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~---~~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      +.+++.+||+..+..  .++ .+|+|.+|+.+ +..   .+   .++.....+|-+.|++...-..+.+++++++++|++
T Consensus        46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve  125 (461)
T PRK07482         46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANE  125 (461)
T ss_pred             ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence            456788999987733  333 36888888876 221   11   233333456777777776434578999999999999


Q ss_pred             HHHHHhc------C-C-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC-------------CC
Q 014492          161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-------------LN  206 (423)
Q Consensus       161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~-------------~d  206 (423)
                      .+++...      . + ..+|+....+|++....+.. .|            ..+..++.+..+.             .+
T Consensus       126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  205 (461)
T PRK07482        126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC  205 (461)
T ss_pred             HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence            9998542      1 2 25788888888764432221 11            1122222111101             13


Q ss_pred             HHHHHHHhh---cCCceEEEEcCCCCCcCcCC-CHHHH---HHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEE
Q 014492          207 VELIADAVE---REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLI  276 (423)
Q Consensus       207 ~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~-~~~~l---~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i  276 (423)
                      ++.+++.+.   .+++.+|++...+...|.+. +.+-+   ++||+. |+++|.||++..|...+..  ....+..+.++
T Consensus       206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv  285 (461)
T PRK07482        206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLI  285 (461)
T ss_pred             HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEE
Confidence            577777774   24578888886666668775 44444   455555 9999999999988533321  12222334444


Q ss_pred             EEccChhhhcccCc-cccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKER  343 (423)
Q Consensus       277 ~i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~  343 (423)
                      +   ++|.++ .|+ .+|.+++.+++.+.+..         ....|+.++++.+++.+.|+.   ++.++...+.-...+
T Consensus       286 ~---~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~  361 (461)
T PRK07482        286 T---VAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFR  361 (461)
T ss_pred             E---Eccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            3   589987 675 89999999998876652         123467889998888888753   233344333333344


Q ss_pred             HHHHHHHccCCCCeecCCCceEEEEEeCCCC------C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492          344 ERLFKLLKDVPFLNPYPSYSNFILCEVTSGM------D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP  409 (423)
Q Consensus       344 ~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~------~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~  409 (423)
                      +.|.+.+++.+.+.-..+.|.++.+++.+..      +     ...+...+.++||++++..   ..+.+|+...   +.
T Consensus       362 ~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~---~~~~i~~~Ppl~it~  438 (461)
T PRK07482        362 ARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP---HGDILGFAPPLVLTR  438 (461)
T ss_pred             HHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC---CCCEEEEeCCCCCCH
Confidence            4444444455544434567778778774211      1     2467788889999986532   1367999865   34


Q ss_pred             hhHHHHHHHH
Q 014492          410 EHTDALMECL  419 (423)
Q Consensus       410 ~~~~~l~~al  419 (423)
                      ++.+++.+++
T Consensus       439 ~ei~~~~~~l  448 (461)
T PRK07482        439 AEADEIVAIA  448 (461)
T ss_pred             HHHHHHHHHH
Confidence            4444444433

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.64  E-value=2.3e-14  Score=138.57  Aligned_cols=259  Identities=16%  Similarity=0.167  Sum_probs=161.5

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC----CC
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF----SL  205 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~----~~  205 (423)
                      ..+.++.+|+.||.+ +..+++||++.++..++.+++++||.|+++..+|-+....+...|++++.++.. +.+    .+
T Consensus        68 I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i  146 (417)
T PF01276_consen   68 IKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGGI  146 (417)
T ss_dssp             HHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB
T ss_pred             HHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccCC
Confidence            568899999999953 578899999999999999999999999999999998888999999999999843 222    34


Q ss_pred             CH-----HHHHHHhhc-CCce---EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhh-----
Q 014492          206 NV-----ELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWV-----  269 (423)
Q Consensus       206 d~-----~~l~~~i~~-~~~~---~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~-----  269 (423)
                      ++     +.+++++++ +..|   +++|++|+. .|.+++++++.++++. ++.|++||||.... +.+-.....     
T Consensus       147 ~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~~gad  225 (417)
T PF01276_consen  147 SPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALALGAD  225 (417)
T ss_dssp             -GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSSTTSS
T ss_pred             ChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhhccCc
Confidence            55     999999874 3344   499999987 7999999999999998 99999999997543 321111111     


Q ss_pred             -ccCCcEEEEccChhhhcccCcccc-ccccCH------HHHHHHHHhcCCCCCcHHHHHHHH---HHhCC---hHHHHHH
Q 014492          270 -KKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL------SIIEYLWRAKQPYNVSVAAEVAAC---AALQN---PIYLEKV  335 (423)
Q Consensus       270 -~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~------~~~~~l~~~~~~~~~~~~~~~a~~---~~l~~---~~~~~~~  335 (423)
                       .....++++.|.+|.+  +++.-+ ++..+.      +.+++.....+..++|.+..+...   ..++.   .+.+++.
T Consensus       226 ~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~  303 (417)
T PF01276_consen  226 RPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEA  303 (417)
T ss_dssp             -CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             cccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence             1134569999999975  676654 444422      333333344455566655443333   33311   1223444


Q ss_pred             HHHHHHHHHHHHHHHccCCCCeecC------CC------------------ceE------EEEEeC----------CCCC
Q 014492          336 KEALIKERERLFKLLKDVPFLNPYP------SY------------------SNF------ILCEVT----------SGMD  375 (423)
Q Consensus       336 ~~~~~~~~~~l~~~L~~~~~~~~~p------~~------------------~~~------~~~~~~----------~~~~  375 (423)
                      .+...+.|+++.+ ++++.++.+..      ..                  +.+      +.+.+|          .|.+
T Consensus       304 i~~a~~~R~~i~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~  382 (417)
T PF01276_consen  304 IELAEEFRKKINR-LNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIP  382 (417)
T ss_dssp             HHHHHHHHHHHHH-HCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---
T ss_pred             HHHHHHHHHHHHh-cCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCC
Confidence            4444444444433 36665554421      11                  112      345543          2678


Q ss_pred             HHHHHHHHHhCCcEEEeCC
Q 014492          376 AKKLKDDLAKMGVMIRHYN  394 (423)
Q Consensus       376 ~~~l~~~L~~~gI~v~~~~  394 (423)
                      +..+.++|.++||.+.-.+
T Consensus       383 g~~~~~~L~~~~I~~Ek~d  401 (417)
T PF01276_consen  383 GYIVEKYLREHGIQVEKTD  401 (417)
T ss_dssp             HHHHHHHHHHTTEE-SEEE
T ss_pred             HHHHHHHHHHcCCEEEecc
Confidence            8899999998899886543

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.64  E-value=2.1e-13  Score=135.31  Aligned_cols=320  Identities=14%  Similarity=0.159  Sum_probs=194.1

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-C---C-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P---Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~---~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      .+++.++|+..+.  ..++ .+|++.+++.+ +.. .   . .+..+...++-+.+++..+-.-+.++++++++++++.+
T Consensus        42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A  121 (427)
T TIGR00508        42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVA  121 (427)
T ss_pred             CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHH
Confidence            3567899997763  2333 46888888776 221 1   1 12333445677778777654447999999999999988


Q ss_pred             HHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCCe-------------EEEecCCC-CC-----CCCHHHHHHHh
Q 014492          163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRKS-DF-----SLNVELIADAV  214 (423)
Q Consensus       163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~~-------------~~~v~~~~-~~-----~~d~~~l~~~i  214 (423)
                      ++....       +| .+|+...-+|+.....+-. .|..             +..++... .+     .-|++++++.+
T Consensus       122 lklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l  201 (427)
T TIGR00508       122 LKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLM  201 (427)
T ss_pred             HHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHH
Confidence            885331       23 5788888888754432222 1211             11222111 11     11466777777


Q ss_pred             hc--CCceEEEEcCC-CCCcCcC-CCHHHHHHH---HcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhh
Q 014492          215 ER--EKPKCIFLTSP-NNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       215 ~~--~~~~~i~l~~p-~NPtG~~-~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~  284 (423)
                      .+  .++.+|++... ++-.|.. .+.+.+.+|   |+. |+++|+||++..+...+..  ....+..+. ++  +++|.
T Consensus       202 ~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pD-i~--~~gK~  278 (427)
T TIGR00508       202 ELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPD-IL--CVGKA  278 (427)
T ss_pred             HhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCC-EE--Eechh
Confidence            52  35667777753 5555653 356666555   444 9999999999776433321  111222233 33  37999


Q ss_pred             hcccCc-cccccccCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-
Q 014492          285 AGLAGL-RVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF-  355 (423)
Q Consensus       285 ~g~~G~-R~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-  355 (423)
                      ++ .|+ .++.++.++++.+.+...       ..+|..++++..++.++|+.-+ -++..++++++.++|.+.|+++.. 
T Consensus       279 l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~L~~l~~~  356 (427)
T TIGR00508       279 LT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILL-EGEWQKQVSAIENQLKRELSPLRKN  356 (427)
T ss_pred             hh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            96 774 678888889988887642       2345668888888887776311 012345566666666666665532 


Q ss_pred             --CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          356 --LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       356 --~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                        +....+.|.++.+.+.+..+...+.+.|.++||.+.+..     +.+|++..   +.++++++.+++++
T Consensus       357 ~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~l~~~ppl~~t~~~id~~~~~l~~  422 (427)
T TIGR00508       357 PVVKDVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPFG-----KLIYVMPPYIITTEQLQKLTAALIE  422 (427)
T ss_pred             CCEEeEeccccEEEEEECCccCHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence              111233467777777544567889999999999997653     47999875   44555555555543

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PLN02452 phosphoserine transaminase

Probab=99.64  E-value=7.2e-14  Score=135.06  Aligned_cols=306  Identities=13%  Similarity=0.076  Sum_probs=205.2

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC--C----------CCCCCCCcc--hHHHHHHHHHHhCCCCC--cEEEeCCHHHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQL--K----------FPYIYPDPE--SRRLRAALAKDSGLESD--HILVGCGADELID  160 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~--~----------~~~~Y~~~g--~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~  160 (423)
                      .+.|..  .|...|++|++++.+-  +          .+|+-++..  ..+.++.+.+.++++.+  -+++..|++.+++
T Consensus         8 ~~~f~p--GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e   85 (365)
T PLN02452          8 VFNFSA--GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA   85 (365)
T ss_pred             eEeeeC--CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence            455554  4455578998887651  1          224434332  56788889999998432  4567789999999


Q ss_pred             HHHHHhcCCCCeEEEcCCC-ch-hhHHHHHHCCCeEEEecCCCC---CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-
Q 014492          161 LIMRCVLDPGDKIVDCPPT-FT-MYEFDAAVNGAAVVKVPRKSD---FSLNVELIADAVEREKPKCIFLTSPNNPDGSI-  234 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~-y~-~~~~~~~~~g~~~~~v~~~~~---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-  234 (423)
                      .++..++.+|+++++..-. |. .+...++.+|...+....+.+   ..+++++++.   ..+.+.|.+|+....||+. 
T Consensus        86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnETstGv~~  162 (365)
T PLN02452         86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANETIHGVEF  162 (365)
T ss_pred             HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCCCCCcEec
Confidence            9999999999987765544 43 455667777764444421121   2456766522   2568899999999999996 


Q ss_pred             CCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc-----
Q 014492          235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-----  309 (423)
Q Consensus       235 ~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~-----  309 (423)
                      .+.+++   .  ++++|+|.+...... +-   .+.+.+  +...|..|.+|.+|  +|+++++++.++++....     
T Consensus       163 ~~~~~i---~--~~~lvVDa~Ss~g~~-pi---dv~~~~--v~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~~~~~~~  229 (365)
T PLN02452        163 KDYPDV---G--NVPLVADMSSNFLSK-PV---DVSKYG--VIYAGAQKNVGPSG--VTIVIIRKDLIGNARPITPGMLD  229 (365)
T ss_pred             Cccccc---C--CCeEEEECCccccCc-cc---CHHHcC--EEEEecccccCCCC--eEEEEEcHHHHhhcccCCCchhh
Confidence            444333   2  479999999874432 11   122233  23358899999888  688999988887643211     


Q ss_pred             --------C-CCCCcHHHHHHHHHHhCC--h-HHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC---CCceEEEEEeCC
Q 014492          310 --------Q-PYNVSVAAEVAACAALQN--P-IYLEKVKEALIKERERLFKLLKDVPFLN-P-YP---SYSNFILCEVTS  372 (423)
Q Consensus       310 --------~-~~~~~~~~~~a~~~~l~~--~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p---~~~~~~~~~~~~  372 (423)
                              . .++++....+++..+|+.  . ..++.+.++.+++.+++++.|++.+++. . .+   ...+.+.+.+++
T Consensus       230 ~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~  309 (365)
T PLN02452        230 YKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGG  309 (365)
T ss_pred             HHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCC
Confidence                    1 135667777777777664  1 2478899999999999999999865332 1 11   133456677775


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe-c--ChhhHHHHHHHHhhh
Q 014492          373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV-G--KPEHTDALMECLMHL  422 (423)
Q Consensus       373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~-~--~~~~~~~l~~al~~l  422 (423)
                      ....++|.+.+.++|+...+|.... .+ +|+|+ +  ..++.+.|.++++++
T Consensus       310 ~~~~~~f~~~~~~~g~~~~~G~r~~-gg-~R~s~yna~~~~~v~~L~~~m~~f  360 (365)
T PLN02452        310 SELEAEFVKEAAKAGMVQLKGHRSV-GG-MRASIYNAMPLAGVEKLVAFMKDF  360 (365)
T ss_pred             chhHHHHHHHHHHCCCcccCCcccc-Cc-eEEECcCCCCHHHHHHHHHHHHHH
Confidence            4467889999999999998876432 23 99996 2  567788888888765

>PRK07480 putative aminotransferase; Validated

Probab=99.64  E-value=1.3e-13  Score=137.66  Aligned_cols=319  Identities=18%  Similarity=0.184  Sum_probs=190.4

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C---CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~---~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +..   .   ..++.+...+|.+.|++.++-..+.++++++++++++
T Consensus        46 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e  125 (456)
T PRK07480         46 DSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND  125 (456)
T ss_pred             eCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence            45678899997762  3344 36888888876 221   1   1234444567888888877544568999999999999


Q ss_pred             HHHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC----CCC--------H
Q 014492          161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SLN--------V  207 (423)
Q Consensus       161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~d--------~  207 (423)
                      .+++....       +| .+|+...-+|++....+.. .|.            .+..++.+..+    ..+        +
T Consensus       126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  205 (456)
T PRK07480        126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA  205 (456)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence            99884421       23 4688888888654322211 111            11122211100    011        2


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      +.+++.+.+   .++.+|++...+.-.|.+.+    .+.+++||+. |+++|+||++..|...+..  ....+..+.+  
T Consensus       206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDi--  283 (456)
T PRK07480        206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDL--  283 (456)
T ss_pred             HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCe--
Confidence            556554421   46788888877776788776    4556667766 9999999999887533321  1222222333  


Q ss_pred             EccChhhhcccCc-cccccccCHHHHHHHHH------hcCCCCCcHHHHHHHHHHhCC---hHHHHHH-HHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQN---PIYLEKV-KEALIKERERL  346 (423)
Q Consensus       278 i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~-~~~~~~~~~~l  346 (423)
                       -+++|.++ .|+ .+|.+++++++.+.+..      ....|+.++++.+++.+.|+-   ++.+++. .+.-...++.|
T Consensus       284 -v~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l  361 (456)
T PRK07480        284 -MTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL  361 (456)
T ss_pred             -eeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence             35689987 674 89999999998887731      223577889998888888853   2223333 12223333334


Q ss_pred             HHHHccCCCCeecCCCceEEEEEeCCC-C------C----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhH
Q 014492          347 FKLLKDVPFLNPYPSYSNFILCEVTSG-M------D----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHT  412 (423)
Q Consensus       347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~-~------~----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~  412 (423)
                      .+ +.+.+.+.-..+.|.++.+++.+. .      +    ...+.+.++++||++.+..     +.+||+...   .++.
T Consensus       362 ~~-l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-----~~l~~~Ppl~it~~ei  435 (456)
T PRK07480        362 RE-LADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVG-----DRMIISPPLVITHAEI  435 (456)
T ss_pred             HH-hhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecC-----CEEEEECCCCCCHHHH
Confidence            33 344454333346677777777311 0      1    1356677789999997632     579999763   4444


Q ss_pred             HHHHHHH
Q 014492          413 DALMECL  419 (423)
Q Consensus       413 ~~l~~al  419 (423)
                      +++.+++
T Consensus       436 d~~~~~l  442 (456)
T PRK07480        436 DELVEKA  442 (456)
T ss_pred             HHHHHHH
Confidence            4444443

>PRK07036 hypothetical protein; Provisional

Probab=99.64  E-value=2.7e-13  Score=135.76  Aligned_cols=319  Identities=15%  Similarity=0.173  Sum_probs=193.5

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---CCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +..   ...   ++.....++-+.+++...-..+.++++++++++++
T Consensus        47 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve  126 (466)
T PRK07036         47 DADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVD  126 (466)
T ss_pred             ECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence            34577899997763  3343 36888888876 221   111   23333456777777766433468999999999999


Q ss_pred             HHHHHhc------C-C-CCeEEEcCCCchhhHHHHHHC-C------------CeEEEecCCCC----CCCC--------H
Q 014492          161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKSD----FSLN--------V  207 (423)
Q Consensus       161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~----~~~d--------~  207 (423)
                      .+++...      . + ..+|+....+|+.....+... |            ..+..+|.+..    ++.+        +
T Consensus       127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  206 (466)
T PRK07036        127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV  206 (466)
T ss_pred             HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence            9988431      1 2 257888888887654333221 1            11233332111    1111        2


Q ss_pred             HHHHHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhh---hhccCCcEE
Q 014492          208 ELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME---WVKKHDNLI  276 (423)
Q Consensus       208 ~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~---~~~~~~~~i  276 (423)
                      +.+++.+.   ..++.+|++...+...|.+.+    .++++++|+. |+++|+||++..|...+....   ..+..+.++
T Consensus       207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDiv  286 (466)
T PRK07036        207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDII  286 (466)
T ss_pred             HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEE
Confidence            34455553   246788888877777788776    5667777876 999999999987754332211   122223333


Q ss_pred             EEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL  346 (423)
Q Consensus       277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l  346 (423)
                         +++|.++ .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+.-+ -+...++.+++.++|
T Consensus       287 ---t~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~-~~~l~~~~~~~g~~l  361 (466)
T PRK07036        287 ---TFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIME-REGLCEHVREVGPYF  361 (466)
T ss_pred             ---EEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHH
Confidence               4689987 78 5899999999998877531         1246778898888888775311 012334444444444


Q ss_pred             HHHHc---cCCCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492          347 FKLLK---DVPFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP  409 (423)
Q Consensus       347 ~~~L~---~~~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~  409 (423)
                      .+.|+   +.+.+.-..+.|.++.+++.+..           -...+.+.+.++||++.+..     +.+||+..   +.
T Consensus       362 ~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~l~Ppl~it~  436 (466)
T PRK07036        362 EERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-----HLCVLSPPLIITR  436 (466)
T ss_pred             HHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-----CEEEEeCCCcCCH
Confidence            44443   34433334466777778773210           13457778889999998643     56888855   45


Q ss_pred             hhHHHHHHHH
Q 014492          410 EHTDALMECL  419 (423)
Q Consensus       410 ~~~~~l~~al  419 (423)
                      ++.+++.+++
T Consensus       437 ~~id~~~~~l  446 (466)
T PRK07036        437 AQIDEIVAIL  446 (466)
T ss_pred             HHHHHHHHHH
Confidence            5555555544

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.63  E-value=1.1e-13  Score=127.75  Aligned_cols=283  Identities=19%  Similarity=0.237  Sum_probs=188.5

Q ss_pred             CCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch----hhHHHHHHCCCeEE
Q 014492          123 PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT----MYEFDAAVNGAAVV  195 (423)
Q Consensus       123 ~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~  195 (423)
                      ++.|   .+|....|++.|+.+-|-  -.-+.+.+++.++..++..++++||.|+..+--|.    .+....+..|+++.
T Consensus        53 G~iYsRi~NPT~~vlE~RiAaLEGG--~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~  130 (426)
T COG2873          53 GNIYTRIMNPTTDVLEERIAALEGG--VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVR  130 (426)
T ss_pred             CceeeeccCchHHHHHHHHHHhhcc--hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEE
Confidence            4445   467788999999998752  12345667778999999999999999998887775    44455678999999


Q ss_pred             EecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCc
Q 014492          196 KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN  274 (423)
Q Consensus       196 ~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~  274 (423)
                      .+.     ..|++.++++++ +++|+|++..-.||-+.+.+.+.+.+||+. |+++|+|..+..-.    .... -+++.
T Consensus       131 fvd-----~~d~~~~~~aI~-~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpy----l~rP-~~hGA  199 (426)
T COG2873         131 FVD-----PDDPENFEAAID-ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPY----LCRP-IEHGA  199 (426)
T ss_pred             EeC-----CCCHHHHHHHhC-cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcce----ecch-hhcCC
Confidence            997     346899999998 899999999999999999999999999998 99999999987321    1111 14566


Q ss_pred             EEEEccChhhhcccCccccccccCHHHHHHHH-----HhcCC------------CCCcHHHHHHHHHHhCC---------
Q 014492          275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-----RAKQP------------YNVSVAAEVAACAALQN---------  328 (423)
Q Consensus       275 ~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~-----~~~~~------------~~~~~~~~~a~~~~l~~---------  328 (423)
                      .|++.|++|.+|--|--+|-++.+....+.-.     .+..+            ++...+...+-...|+|         
T Consensus       200 DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfn  279 (426)
T COG2873         200 DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFN  279 (426)
T ss_pred             CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHH
Confidence            79999999998878888887776433222221     11110            11112222222233332         


Q ss_pred             -------hHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC-----------------CCceEEEEEeCCC-CCHHHHHH
Q 014492          329 -------PIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP-----------------SYSNFILCEVTSG-MDAKKLKD  381 (423)
Q Consensus       329 -------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p-----------------~~~~~~~~~~~~~-~~~~~l~~  381 (423)
                             .+.+.-+.++..++..++.+.|++.+.+. + +|                 ..|..+.+.+.++ ...+.|.+
T Consensus       280 Afl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~  359 (426)
T COG2873         280 AFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFID  359 (426)
T ss_pred             HHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHH
Confidence                   23355566777889999999998865332 1 22                 2245667788755 23355555


Q ss_pred             HHH--h--CC------cEEEeCCC-------------CCCCCeEEEEecChhhHHHHHHHH
Q 014492          382 DLA--K--MG------VMIRHYNN-------------KELKGYVRVSVGKPEHTDALMECL  419 (423)
Q Consensus       382 ~L~--~--~g------I~v~~~~~-------------~~~~~~iRis~~~~~~~~~l~~al  419 (423)
                      .|.  .  .+      +.+.|.+.             .-.++.||+|++.++. ++|..-|
T Consensus       360 ~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGIEd~-~DiiaDl  419 (426)
T COG2873         360 ALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGIEDI-DDIIADL  419 (426)
T ss_pred             HHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEeccCCH-HHHHHHH
Confidence            543  1  12      23334322             1236789999997653 4444433

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.63  E-value=2.3e-13  Score=134.76  Aligned_cols=323  Identities=12%  Similarity=0.105  Sum_probs=193.5

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +...  ..++.+...+|-+.+.+.++...+.++++++++|+++.+++
T Consensus        49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~Aik  128 (433)
T PRK00615         49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVR  128 (433)
T ss_pred             ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence            35578899997763  3344 46888888876 2221  22344445677788887775434689999999999999988


Q ss_pred             HhcC-CC-CeEEEcCCCchhhHH---HH-HHCCCeE----EEe--c-CCCC----CCCCHHHHHHHhhc--CCceEEEEc
Q 014492          165 CVLD-PG-DKIVDCPPTFTMYEF---DA-AVNGAAV----VKV--P-RKSD----FSLNVELIADAVER--EKPKCIFLT  225 (423)
Q Consensus       165 ~l~~-~g-d~Vl~~~p~y~~~~~---~~-~~~g~~~----~~v--~-~~~~----~~~d~~~l~~~i~~--~~~~~i~l~  225 (423)
                      .... .| .+|+....+|++...   .+ ...+...    ...  + ....    ..-|++.+++.+.+  .++.+|++.
T Consensus       129 lAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E  208 (433)
T PRK00615        129 LARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE  208 (433)
T ss_pred             HHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence            4321 23 678888888876431   11 1111000    000  0 0000    01268888888753  356788877


Q ss_pred             CCCCCcCcCCCHH----HHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          226 SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       226 ~p~NPtG~~~~~~----~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      ......|.+.+.+    ++.++|+. |+++|+||++..|..+... ....+..+.+ +  +++|.+| .|+.+|++++++
T Consensus       209 pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi-~--~~gK~lg-gG~p~~av~~~~  284 (433)
T PRK00615        209 PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDI-T--VYGKILG-GGLPAAAVVAHK  284 (433)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCe-E--EEccccc-CCcceeeeeecH
Confidence            7777789888765    78888876 9999999999766322111 1111222333 2  4799997 678899999999


Q ss_pred             HHHHHHHHhc-----CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCC-CeecCCCceEEEEEe
Q 014492          300 SIIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPF-LNPYPSYSNFILCEV  370 (423)
Q Consensus       300 ~~~~~l~~~~-----~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~p~~~~~~~~~~  370 (423)
                      ++++.+....     ..++.++++.+++.+.|+.   ++..++..+.-...++.|.+.+++.++ +.... .|.++.+.+
T Consensus       285 ~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~  363 (433)
T PRK00615        285 SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFF  363 (433)
T ss_pred             HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEE
Confidence            9998875321     2355688888888877753   222333333333333444444444332 22233 566666666


Q ss_pred             CCCC-------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          371 TSGM-------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       371 ~~~~-------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      .+..             ....+...|.++||++.+...+.  ..++... +.++++++.+++++
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--~~ls~~h-t~~did~~~~a~~~  424 (433)
T PRK00615        364 NENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA--SFLSSAH-SMENLDYAQNVLID  424 (433)
T ss_pred             eCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc--cceecCC-CHHHHHHHHHHHHH
Confidence            4211             12367888889999998765321  1222222 45556666666654

>PRK06917 hypothetical protein; Provisional

Probab=99.63  E-value=7.7e-13  Score=131.91  Aligned_cols=325  Identities=15%  Similarity=0.148  Sum_probs=193.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC-CC----CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~~----~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.+||+..+.  ..++ .+|+|.+++.+ +.. .+    .|..+...+|.+.|++.+.-..+.++++++++++++.
T Consensus        27 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  106 (447)
T PRK06917         27 DQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANET  106 (447)
T ss_pred             eCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHH
Confidence            35678899997763  3354 37888888876 221 11    2333344577888887765334689999999999999


Q ss_pred             HHHHhc-------CCC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC----CC--------CHH
Q 014492          162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE  208 (423)
Q Consensus       162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~  208 (423)
                      +++...       .+| .+|+....+|+.....+.. .|.            .+..+|.+...    .-        +++
T Consensus       107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  186 (447)
T PRK06917        107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT  186 (447)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence            998541       123 6788888888755433322 111            11122211100    00        245


Q ss_pred             HHHHHhhc---CCceEEEEcCCCC-CcCcCC-CHHHHH---HHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEE
Q 014492          209 LIADAVER---EKPKCIFLTSPNN-PDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIV  277 (423)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~N-PtG~~~-~~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~  277 (423)
                      .+++.+++   +++.+|++..... --|.+. +.+.++   ++|+. |+++|.||++..|...+...  ...+..+.+  
T Consensus       187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi--  264 (447)
T PRK06917        187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI--  264 (447)
T ss_pred             HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE--
Confidence            66766652   3578888875443 345554 455444   45554 99999999998774322211  222223333  


Q ss_pred             EccChhhhcccCc-cccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLL  350 (423)
Q Consensus       278 i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L  350 (423)
                       -+++|.++ .|+ .+|.+++++++.+.+...      ...|+.++++.+++.+.|+.-+ -+...++.+++-++|.+.|
T Consensus       265 -~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~~L  341 (447)
T PRK06917        265 -MTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYME-KHNLPEKAAEKGEYLIKGL  341 (447)
T ss_pred             -EEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHH
Confidence             35689997 785 899999999998877532      1246778888888888875311 0123344444445555544


Q ss_pred             cc----CCCCeecCCCceEEEEEeCCC-----------CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---Ch
Q 014492          351 KD----VPFLNPYPSYSNFILCEVTSG-----------MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KP  409 (423)
Q Consensus       351 ~~----~~~~~~~p~~~~~~~~~~~~~-----------~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~  409 (423)
                      ++    .+.+.-....|.++.+++.+.           .-...+.+.++++||++.+...   ....+.+|++..   +.
T Consensus       342 ~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~  421 (447)
T PRK06917        342 QKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITY  421 (447)
T ss_pred             HHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCH
Confidence            43    443333446677777766210           0145677788899999987532   112478999866   34


Q ss_pred             hhHHHHHHHHh
Q 014492          410 EHTDALMECLM  420 (423)
Q Consensus       410 ~~~~~l~~al~  420 (423)
                      ++.+++.++++
T Consensus       422 ~eid~~~~~l~  432 (447)
T PRK06917        422 SELDELLSIFA  432 (447)
T ss_pred             HHHHHHHHHHH
Confidence            44555554443

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.63  E-value=6.2e-13  Score=132.68  Aligned_cols=319  Identities=13%  Similarity=0.114  Sum_probs=193.6

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +..++.+||+..+  ...++ .+|++.+++.+ +.   +.  ..++.....+|-+.+++..+...+.++++++++++++.
T Consensus        50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~  129 (453)
T PRK06943         50 DRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEI  129 (453)
T ss_pred             eCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence            3457889999776  34444 46888888876 22   11  12344445677788877765434689999999999999


Q ss_pred             HHHHhc-------CC-CCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC------------CCHH
Q 014492          162 IMRCVL-------DP-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS------------LNVE  208 (423)
Q Consensus       162 ~~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~------------~d~~  208 (423)
                      +++...       .+ ..+|+....+|+.....+-. .|            ..+..+|.++...            -+++
T Consensus       130 AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (453)
T PRK06943        130 ALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALA  209 (453)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHH
Confidence            998541       12 36789888888754422211 11            0122233211111            1246


Q ss_pred             HHHHHhhc--CCceEEEEcC-CCCCcCcCC-CHHHHH---HHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492          209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (423)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~---~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i  278 (423)
                      ++++.+..  .++.+|++.. .+...|.+. +.+.++   ++|+. |+++|.||++..|...+...  ...+..+.+++ 
T Consensus       210 ~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt-  288 (453)
T PRK06943        210 DVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC-  288 (453)
T ss_pred             HHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEe-
Confidence            77777742  4678888886 367678755 555444   45555 99999999998885433221  22233344443 


Q ss_pred             ccChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Q 014492          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKL  349 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~  349 (423)
                        ++|.++ .| +.+|.+++++++.+.+..        ....|+.++++.+++.+.|+--+ -+...++.++.-+++.+.
T Consensus       289 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~-~~~l~~~~~~~G~~l~~~  364 (453)
T PRK06943        289 --LSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFA-EDDVLARNARKSARLRAA  364 (453)
T ss_pred             --eehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHH
Confidence              489998 78 599999999999887752        22346778888888887775311 012233334444444444


Q ss_pred             Hcc---CCCCeecCCCceEEEEEeCC-CC----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHH
Q 014492          350 LKD---VPFLNPYPSYSNFILCEVTS-GM----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMEC  418 (423)
Q Consensus       350 L~~---~~~~~~~p~~~~~~~~~~~~-~~----~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~a  418 (423)
                      |++   .+.+.-....|.++.+++.. ..    ....+.+.+.++||++.+.+     +.+||+..   +.++.+++.++
T Consensus       365 L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-----~~l~~~Ppl~it~~eid~~~~~  439 (453)
T PRK06943        365 LAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG-----TTVYLMPPYVLDDDEIAWLAER  439 (453)
T ss_pred             HHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCcCCHHHHHHHHHH
Confidence            433   34333344667777777742 11    13467788889999997753     46999855   34444444444


Q ss_pred             H
Q 014492          419 L  419 (423)
Q Consensus       419 l  419 (423)
                      +
T Consensus       440 l  440 (453)
T PRK06943        440 T  440 (453)
T ss_pred             H
Confidence            4

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.63  E-value=1.1e-12  Score=127.70  Aligned_cols=290  Identities=13%  Similarity=0.117  Sum_probs=183.9

Q ss_pred             CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch-hhHHHHHHCCCeEEEec---
Q 014492          124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVP---  198 (423)
Q Consensus       124 ~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~---  198 (423)
                      ..| .++...+|++++++++|.+  .++.+++++.+++++....++|||.|  +..+|. .........|+..+.+.   
T Consensus        72 d~Yagd~s~~~LE~~vAe~lG~e--~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~  147 (460)
T PRK13237         72 EAYAGSRNFYHLEETVQEYYGFK--HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE  147 (460)
T ss_pred             hhhcCCCcHHHHHHHHHHHHCCC--eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence            347 6778899999999999974  68889888889998877678999965  444443 33333566788766663   


Q ss_pred             -------CCCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCc-CcCCCH---HHHHHHHcC-CCEEEEccCCcccc---
Q 014492          199 -------RKSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIIND---EDLLKILEM-PILVVLDEAYTEFS---  260 (423)
Q Consensus       199 -------~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPt-G~~~~~---~~l~~i~~~-~~~li~Deay~~~~---  260 (423)
                             .+..+.+|++++++.|++.   +++++.+.+++|.. |...|.   +++.++|+. |+.||+|.++....   
T Consensus       148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f  227 (460)
T PRK13237        148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF  227 (460)
T ss_pred             ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence                   1246789999999999742   34467777788888 688865   455555655 99999999986331   


Q ss_pred             -------CCCchhh----hhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcCCC-------CCcHHHHHH
Q 014492          261 -------GLESRME----WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-------NVSVAAEVA  321 (423)
Q Consensus       261 -------~~~~~~~----~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~-------~~~~~~~~a  321 (423)
                             +.+..+.    ....+ ...++.|++|.++.+ . -|+++. ++++.++++...-.+       +++.--..+
T Consensus       228 I~~re~~y~~~~i~ei~~e~~s~-aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~a  304 (460)
T PRK13237        228 IKEREEGYQDKSIKEIVHEMFSY-ADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEA  304 (460)
T ss_pred             hcccccccCCCcHhHHhhhccCc-CcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHH
Confidence                   1111111    01112 236667799987654 1 277776 577888887764322       233323333


Q ss_pred             HHHHhCChHHHH-HHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC--------CCCCHHHHHHHHH-hCCcEEE
Q 014492          322 ACAALQNPIYLE-KVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SGMDAKKLKDDLA-KMGVMIR  391 (423)
Q Consensus       322 ~~~~l~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~--------~~~~~~~l~~~L~-~~gI~v~  391 (423)
                      +...|.+  +.+ ...++.-.+.++|.+.|.+.+.-.+.|.+|.-++++..        ....+..+...|- +.||--.
T Consensus       305 lAvgl~E--~~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~  382 (460)
T PRK13237        305 MAIGIEE--SVQYEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSM  382 (460)
T ss_pred             HHhHHHh--hchHHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeE
Confidence            3333332  111 22333334567788888877654556888877777542        1345778887775 7887654


Q ss_pred             e-CCC-----C-CC------CCeEEEEec----ChhhHHHHHHHHhhh
Q 014492          392 H-YNN-----K-EL------KGYVRVSVG----KPEHTDALMECLMHL  422 (423)
Q Consensus       392 ~-~~~-----~-~~------~~~iRis~~----~~~~~~~l~~al~~l  422 (423)
                      . |+.     + ..      -..+|+++.    +..++|.+.+++..+
T Consensus       383 e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~  430 (460)
T PRK13237        383 ERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKL  430 (460)
T ss_pred             eecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHH
Confidence            2 111     1 11      257999975    466678888887765

>PRK07481 hypothetical protein; Provisional

Probab=99.62  E-value=6.6e-13  Score=132.56  Aligned_cols=319  Identities=16%  Similarity=0.188  Sum_probs=191.5

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC---CCC---CCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY---IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~---~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~al~  160 (423)
                      .+++.+||+..+  ...++ .+|++.+|+.+ +.   +..   .+..+...++-+.|++.++ -..+.++++++++++++
T Consensus        39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve  118 (449)
T PRK07481         39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVE  118 (449)
T ss_pred             CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHH
Confidence            457788999765  23344 46888888876 22   111   2344445567788887763 12468999999999999


Q ss_pred             HHHHHhcC-------CC-CeEEEcCCCchhhHHHHHHC-C------------CeEEEecCCCC----CC-CCHHHH----
Q 014492          161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKSD----FS-LNVELI----  210 (423)
Q Consensus       161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g------------~~~~~v~~~~~----~~-~d~~~l----  210 (423)
                      .+++....       +| .+|+...-+|++....+... |            ..+..++.+..    +. .|++.+    
T Consensus       119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~  198 (449)
T PRK07481        119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC  198 (449)
T ss_pred             HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence            99884321       23 57888888887644322221 1            11222332111    11 244443    


Q ss_pred             ----HHHhh---cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEE
Q 014492          211 ----ADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLI  276 (423)
Q Consensus       211 ----~~~i~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i  276 (423)
                          ++.+.   ..++.+|++...+.-.|.+.+    .++++++|+. |+++|.||++..|...+..  ....+..+.++
T Consensus       199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv  278 (449)
T PRK07481        199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIM  278 (449)
T ss_pred             HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEE
Confidence                33332   246888888877776787665    3455666665 9999999999987543321  11222233333


Q ss_pred             EEccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL  346 (423)
Q Consensus       277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l  346 (423)
                         +++|.++ .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+.-+ -+...++.++.-+++
T Consensus       279 ---~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~-~~~l~~~~~~~g~~l  353 (449)
T PRK07481        279 ---CLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVV-REDLPANAAKRGAYL  353 (449)
T ss_pred             ---EEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHH
Confidence               3589987 67 5899999999988877531         2346778888888888775311 012333444444444


Q ss_pred             HHHHcc----CCCCeecCCCceEEEEEeCCC------CC-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---C
Q 014492          347 FKLLKD----VPFLNPYPSYSNFILCEVTSG------MD-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---K  408 (423)
Q Consensus       347 ~~~L~~----~~~~~~~p~~~~~~~~~~~~~------~~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~  408 (423)
                      .+.|++    .+.+.-..+.|.++.+++...      .+     ...+.+.+.++||++.+.+     +.+||+..   +
T Consensus       354 ~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-----~~i~l~Ppl~it  428 (449)
T PRK07481        354 LEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-----TKIILSPPLVIQ  428 (449)
T ss_pred             HHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-----CEEEEECCCCCC
Confidence            444443    443333446677777777321      01     3456777889999998753     35899865   4


Q ss_pred             hhhHHHHHHHHh
Q 014492          409 PEHTDALMECLM  420 (423)
Q Consensus       409 ~~~~~~l~~al~  420 (423)
                      .++.+++.++++
T Consensus       429 ~~eid~~~~~l~  440 (449)
T PRK07481        429 REDVDRIVDALD  440 (449)
T ss_pred             HHHHHHHHHHHH
Confidence            555555555554

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.60  E-value=8.8e-13  Score=131.99  Aligned_cols=320  Identities=12%  Similarity=0.121  Sum_probs=192.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC---C--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+++.++|+..+.  ..++ .+|++.+++.+ +..   .  ..|..+...+|-+.+++......+.++++++++++++.
T Consensus        43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~  122 (466)
T PRK07030         43 DFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEV  122 (466)
T ss_pred             ECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence            34577899997763  3333 36888888876 221   1  12343445567777777664334689999999999999


Q ss_pred             HHHHhc------C-C-CCeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCCC----CC--------CHH
Q 014492          162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE  208 (423)
Q Consensus       162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~~----~~--------d~~  208 (423)
                      +++...      . + ..+|+....+|+.....+.. .|.            .+..+|....+    +.        +++
T Consensus       123 AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~  202 (466)
T PRK07030        123 ALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFA  202 (466)
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHH
Confidence            998542      1 2 35788888888765433322 111            12333321111    11        245


Q ss_pred             HHHHHhhc--CCceEEEEcC-CCCCcCcCCC-HHH---HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEE
Q 014492          209 LIADAVER--EKPKCIFLTS-PNNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVL  278 (423)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~~-~~~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i  278 (423)
                      .+++.+.+  .++.+|++.. .+.-.|.+.+ .+.   ++++|+. |+++|.||++..|...+..  ....+..+.+++ 
T Consensus       203 ~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~-  281 (466)
T PRK07030        203 HMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC-  281 (466)
T ss_pred             HHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEe-
Confidence            66777742  4677888875 4665677554 444   4555665 9999999999888543321  122223344443 


Q ss_pred             ccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 014492          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFK  348 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~  348 (423)
                        ++|.++ .| +.+|.+++++++.+.+..         ....|+.++++.+++.+.|+--+ -+...++.++.-+++.+
T Consensus       282 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~-~~~l~~~~~~~G~~l~~  357 (466)
T PRK07030        282 --LSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFE-QDNVIENNRALARRMAE  357 (466)
T ss_pred             --eehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence              489998 78 499999999999887642         22346778998888888875311 11233444444555555


Q ss_pred             HHcc---CCCCeecCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHH
Q 014492          349 LLKD---VPFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDA  414 (423)
Q Consensus       349 ~L~~---~~~~~~~p~~~~~~~~~~~~~~--------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~  414 (423)
                      .|++   .+.+.-....|.++.+++.+..        +   ...+.+.+.++||++.+.+     +.+|+......+.++
T Consensus       358 ~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~i~~~Ppl~it~~e  432 (466)
T PRK07030        358 ATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-----SVVYFLPPYVITPEQ  432 (466)
T ss_pred             HHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCccCCHHH
Confidence            5543   3433324566777777774211        1   2457778889999998743     579998653222344


Q ss_pred             HHHHHh
Q 014492          415 LMECLM  420 (423)
Q Consensus       415 l~~al~  420 (423)
                      +.++++
T Consensus       433 id~~~~  438 (466)
T PRK07030        433 IDFLAE  438 (466)
T ss_pred             HHHHHH
Confidence            444443

>PRK15029 arginine decarboxylase; Provisional

Probab=99.60  E-value=1.1e-12  Score=135.83  Aligned_cols=167  Identities=16%  Similarity=0.108  Sum_probs=129.1

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC--
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF--  203 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~--  203 (423)
                      |..-..+.++..|+.||.+ ...+++||++.++..++.+++++||+|+++..+|-+....+.+.|++++.++.. +.+  
T Consensus       203 p~G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi  281 (755)
T PRK15029        203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI  281 (755)
T ss_pred             CCcHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence            3333678999999999964 678999999999999999999999999999999998888999999999999732 222  


Q ss_pred             --CCC-----HHHHHHHhhc-CCce--------EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCch
Q 014492          204 --SLN-----VELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESR  265 (423)
Q Consensus       204 --~~d-----~~~l~~~i~~-~~~~--------~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~  265 (423)
                        .++     ++.+++++.+ +..|        ++++++|+. .|.+++.+++.++++. ++.|++||||..+. +.+..
T Consensus       282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~  360 (755)
T PRK15029        282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY  360 (755)
T ss_pred             ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccc
Confidence              334     8999998853 2233        899999987 7999999999999987 99999999997543 33211


Q ss_pred             h--hhh-----c-cCCcEEEEccChhhhcccCcccc-cccc
Q 014492          266 M--EWV-----K-KHDNLIVLRTFSKRAGLAGLRVG-YGAF  297 (423)
Q Consensus       266 ~--~~~-----~-~~~~~i~i~S~SK~~g~~G~R~G-~i~~  297 (423)
                      .  ..+     . ....++++.|.+|.+  +++.-| ++..
T Consensus       361 p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv  399 (755)
T PRK15029        361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV  399 (755)
T ss_pred             cccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence            1  111     1 223359999999975  566655 4444

>PLN02263 serine decarboxylase

Probab=99.60  E-value=7.3e-13  Score=130.16  Aligned_cols=273  Identities=12%  Similarity=-0.008  Sum_probs=182.4

Q ss_pred             HHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHH
Q 014492          133 RLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE  208 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~  208 (423)
                      ++-+.+++.+|.+++  .-++|+|+++++-.++.+-.+  +...++++.-+|.++...++..|++++.||.++++.+|++
T Consensus       137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~  216 (470)
T PLN02263        137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA  216 (470)
T ss_pred             HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence            355555666788653  467899999998877765432  3346888999999999999999999999999888999999


Q ss_pred             HHHHHhhcCC--ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CC-----EEEEccCCccccC----CCchhhhhccCCcEE
Q 014492          209 LIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEM-PI-----LVVLDEAYTEFSG----LESRMEWVKKHDNLI  276 (423)
Q Consensus       209 ~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~-----~li~Deay~~~~~----~~~~~~~~~~~~~~i  276 (423)
                      +|++++.+..  |-+|+.+-++.++|.+=|++++.++++. |+     |+.+|.+|+.+..    .......  ..+-.=
T Consensus       217 aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df--~~~vDS  294 (470)
T PLN02263        217 DFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF--KKPIGS  294 (470)
T ss_pred             HHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCC--CcCccE
Confidence            9999996433  5567677889999999999999999986 75     9999999986542    1011111  111223


Q ss_pred             EEccChhhhcccCccccccccCHHHHHHHHHhc------C-CC--CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------Q-PY--NVSVAAEVAACAALQN--PIYLEKVKEALIKERER  345 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~------~-~~--~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~  345 (423)
                      +.-+++| |+.....+|.++.....++.+....      . ..  +-+......+...|+.  .+.+.+..++..++.++
T Consensus       295 IsvD~HK-~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~  373 (470)
T PLN02263        295 VSVSGHK-FVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHY  373 (470)
T ss_pred             EEECCcc-ccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence            4557789 4457788898888765544332110      0 11  1121223334444443  34577788888889999


Q ss_pred             HHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          346 LFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       346 l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      +.+.|++.+......+..+.+.+.-|.    ++    ...+|..+...     ++.++|.+...-+.+.+.+.++.
T Consensus       374 l~~~l~~~g~~~~~~p~s~~V~f~~p~----~~----~~~~gW~L~~~-----~~~~Hivvmphv~~~~id~fi~D  436 (470)
T PLN02263        374 LKDRLREAGISAMLNELSSTVVFERPK----DE----EFVRRWQLACQ-----GNIAHVVVMPSVTIEKLDYFLKE  436 (470)
T ss_pred             HHHHHHhCCCeEEeCCCceEEEEecCc----hH----HhhcceEEccC-----CCcEEEEEcCCCCHHHHHHHHHH
Confidence            999999887655555666767666541    11    12355555542     35689998753233444444443

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.60  E-value=5.7e-13  Score=133.11  Aligned_cols=315  Identities=17%  Similarity=0.131  Sum_probs=185.2

Q ss_pred             CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCCCC--CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYI--YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~~--Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +.+++.+||+..+..  .++ .+|+|.+++.+ +.....  ++.....+|-+.+++.+.- .+.+.++++++|+...+++
T Consensus        95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~Alk  173 (474)
T PLN02482         95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLR  173 (474)
T ss_pred             ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHH
Confidence            345778899876643  343 36888888876 332222  2333345677777776642 4799999999999999988


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHH--HHH-CCC-----------------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFD--AAV-NGA-----------------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~--~~~-~g~-----------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (423)
                      ...  ...++|+....+|++....  ... .|.                 .++.+|    + -|++.+++.+.+  .++.
T Consensus       174 lAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~~~iA  248 (474)
T PLN02482        174 LARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP----Y-NDLEAVKKLFEANKGEIA  248 (474)
T ss_pred             HHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec----C-CChHHHHHHHHhCCCceE
Confidence            432  1236788888888764421  111 010                 011111    1 278889888853  3577


Q ss_pred             EEEEcCCCCCcCcCCCHH----HHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccc
Q 014492          221 CIFLTSPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~----~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      +|++.......|.+.+.+    .+.+||+. |+++|+||++..|..+... ....+..+.+   .+++|.+| .|+.+|.
T Consensus       249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi---~t~gK~lg-gG~Piga  324 (474)
T PLN02482        249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDL---TTLGKVIG-GGLPVGA  324 (474)
T ss_pred             EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCE---EEecchhh-CCCceEE
Confidence            888887777789877744    46677776 9999999999877332111 1112222332   46799998 8899999


Q ss_pred             cccCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCee-cCCCce
Q 014492          295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNP-YPSYSN  364 (423)
Q Consensus       295 i~~~~~~~~~l~~~~-----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~p~~~~  364 (423)
                      +++++++++.+....     ..|+.++++..++.+.|+.-+- +...++++++-++|.+.|++    .+...+ ..-.+ 
T Consensus       325 v~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g-  402 (474)
T PLN02482        325 YGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISG-  402 (474)
T ss_pred             EEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccce-
Confidence            999999998875321     2355678887777777653110 12344444445555555543    321111 12233 


Q ss_pred             EEEEEeCC--C--------CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492          365 FILCEVTS--G--------MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  421 (423)
Q Consensus       365 ~~~~~~~~--~--------~~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  421 (423)
                      ++.+.+.+  .        .+   ...+.+.|.++||++.+.....  ++  +++. ++++++++.+++++
T Consensus       403 ~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~--~~--psl~ht~~dId~~l~al~~  469 (474)
T PLN02482        403 MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA--GF--TSLAHTEEDIDFTIAAAER  469 (474)
T ss_pred             EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC--Cc--CCCCCCHHHHHHHHHHHHH
Confidence            32333311  0        11   2457778889999998754311  12  3332 34455555555543

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.59  E-value=2.5e-12  Score=127.52  Aligned_cols=297  Identities=19%  Similarity=0.185  Sum_probs=185.1

Q ss_pred             CCHHHHHHHhcC-C-CC-CCC--C--Cc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          109 PPPEVREALGQL-K-FP-YIY--P--DP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       109 ~~~~v~~al~~~-~-~~-~~Y--~--~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      .++++.+++.+. . +. ..|  .  ..  ....+++.+++++|.+.  .+++++++.++.+++. .+.+||+|++....
T Consensus        93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e  169 (454)
T TIGR00474        93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALN-TLAKGKEVIVSRGE  169 (454)
T ss_pred             CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-HhCCcCEEEECCCh
Confidence            468888888763 1 11 112  1  11  24789999999999743  4456666678888886 46889999998876


Q ss_pred             chh------hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc--C--cCCCHHHHHHHHcC-CC
Q 014492          180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PI  248 (423)
Q Consensus       180 y~~------~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~i~~~-~~  248 (423)
                      |..      +....+..|++++.++.++  ..|++++++++. +++++|++.+++|++  |  .+.+.+++.++|+. |+
T Consensus       170 ~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~-~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~  246 (454)
T TIGR00474       170 LVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT-ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGL  246 (454)
T ss_pred             hhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC-cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCC
Confidence            432      2345667899999997532  457999999997 789999999999995  6  57899999999997 99


Q ss_pred             EEEEccCCccccCC------Cch-hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHH
Q 014492          249 LVVLDEAYTEFSGL------ESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAE  319 (423)
Q Consensus       249 ~li~Deay~~~~~~------~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~  319 (423)
                      ++++|.....+...      ..+ .......+..+++.|.+|.+|.+  ..|++++++++++++.+..-  ...+.-...
T Consensus       247 ~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~l  324 (454)
T TIGR00474       247 PVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNPLTRALRVDKLTL  324 (454)
T ss_pred             eEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhchhHHHHhhChHHH
Confidence            99999864322110      011 11122344569999999987534  47999999988876543211  011222222


Q ss_pred             HHHHH----HhCCh-HH--------HHHHHHHHHHHHHHHHHHHccC--CCC--eecCC-----Cc---------eEEEE
Q 014492          320 VAACA----ALQNP-IY--------LEKVKEALIKERERLFKLLKDV--PFL--NPYPS-----YS---------NFILC  368 (423)
Q Consensus       320 ~a~~~----~l~~~-~~--------~~~~~~~~~~~~~~l~~~L~~~--~~~--~~~p~-----~~---------~~~~~  368 (423)
                      .+..+    ++... .|        +....++++++..++.+.|++.  +.+  .+.+.     +|         .-+.+
T Consensus       325 a~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~  404 (454)
T TIGR00474       325 AALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTL  404 (454)
T ss_pred             HHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEE
Confidence            22222    22211 12        2233456677888888888764  222  12211     11         12233


Q ss_pred             EeCCCCCHHHHHHHHHhCC--cEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHH
Q 014492          369 EVTSGMDAKKLKDDLAKMG--VMIRHYNNKELKGYVRVSVGK--PEHTDALMECL  419 (423)
Q Consensus       369 ~~~~~~~~~~l~~~L~~~g--I~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al  419 (423)
                      + +.+.++.++.+.|++..  |+.+-     .++.+-+-+.+  +++.+.+.+++
T Consensus       405 ~-~~~~~~~~l~~~lr~~~~~ii~r~-----~~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       405 T-PDGLSAEKLEARLRELPPPIIGRI-----EDDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             e-cCCCCHHHHHHHHhcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHh
Confidence            3 23678899999998655  44442     24667777654  34445555544

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.58  E-value=2.1e-12  Score=137.90  Aligned_cols=319  Identities=13%  Similarity=0.056  Sum_probs=195.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCC-CC---cc----hHHHHHHHHHHhCCCCCcEEEeC-CHHHHHHH--
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLK---FPYIY-PD---PE----SRRLRAALAKDSGLESDHILVGC-GADELIDL--  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y-~~---~g----~~~lr~~ia~~~g~~~~~i~~t~-G~~~al~~--  161 (423)
                      .+|.|+...+.+  .|.+...+....   ..+-| |.   .|    ..++.+.+++.+|.+  ++.+.. |++++...  
T Consensus       500 ~~i~lGsct~~~--~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL  575 (954)
T PRK05367        500 SMIPLGSCTMKL--NAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAGL  575 (954)
T ss_pred             ceeeCCcCCCcC--CHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHHH
Confidence            456677644433  455544444322   11334 31   12    236778888888975  454444 55444423  


Q ss_pred             -HHHHh-cCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCc
Q 014492          162 -IMRCV-LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGS  233 (423)
Q Consensus       162 -~~~~l-~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~  233 (423)
                       +++.+ ..+|+    +|+++...|......+...|.+++.++.+.++.+|+++|++.+.+.  ++.+|++++|++-.+.
T Consensus       576 ~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~  655 (954)
T PRK05367        576 LAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVF  655 (954)
T ss_pred             HHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeee
Confidence             23322 24565    5999999998777888899999999998777799999999999643  5778888899886444


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHHHh
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA  308 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~  308 (423)
                      ..+.+++.++++. |+++++|.++......-.   .....+-+++..+++|.|+.|    |-.+|++.+.+.+...+...
T Consensus       656 e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~  732 (954)
T PRK05367        656 EETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGH  732 (954)
T ss_pred             cCCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCC
Confidence            5789999999987 999999999963221111   111334558888999987532    33467777665443332211


Q ss_pred             c-----C---CCCC--cHH----HHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCC----ceEEE
Q 014492          309 K-----Q---PYNV--SVA----AEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSY----SNFIL  367 (423)
Q Consensus       309 ~-----~---~~~~--~~~----~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~----~~~~~  367 (423)
                      .     .   ...+  +..    ....+..++.  ..+.+++..++...+.+++.+.|++.-.+.. .|.+    ..++-
T Consensus       733 ~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~  812 (954)
T PRK05367        733 PVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILD  812 (954)
T ss_pred             ccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEE
Confidence            0     0   0111  112    1111222222  2355667777667889999999976421111 1111    11222


Q ss_pred             E-EeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          368 C-EVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       368 ~-~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      + .++.  +.+..++.++|.++|+.....+ +...+.+||+++   +.+|.|+|.++++.|
T Consensus       813 ~~~~~~~~g~~~~di~krL~d~G~~~~t~~-~pv~~~l~i~ptE~~s~~elDr~~~al~~i  872 (954)
T PRK05367        813 LRPLKESTGITVDDIAKRLIDYGFHAPTMS-FPVAGTLMVEPTESESKAELDRFCDAMIAI  872 (954)
T ss_pred             eecccccCCCCHHHHHHHHHHCCCeEeecC-CccCCEEEEEeeecCCHHHHHHHHHHHHHH
Confidence            2 2332  4678999999999999876643 334789999986   456677777777654

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.58  E-value=2.2e-12  Score=132.39  Aligned_cols=163  Identities=15%  Similarity=0.234  Sum_probs=123.5

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-HHHCCCeEEEecCC-CCC----C
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDF----S  204 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~-~~~----~  204 (423)
                      ..+.++..|+.||.+ ...+++||++.++..++.+++.+||.|++...+|-+.... ..+.|++++.++.. +.+    .
T Consensus       176 i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~  254 (720)
T PRK13578        176 AKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGG  254 (720)
T ss_pred             HHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCC
Confidence            568899999999964 5788999999999999999999999999999999887774 78899999998743 222    3


Q ss_pred             CCH-----HHHHHHhhcC--------C-ceEEEEcCCCCCcCcCCCHHHHHHHH-cC-CCEEEEccCCcccc-CCCc---
Q 014492          205 LNV-----ELIADAVERE--------K-PKCIFLTSPNNPDGSIINDEDLLKIL-EM-PILVVLDEAYTEFS-GLES---  264 (423)
Q Consensus       205 ~d~-----~~l~~~i~~~--------~-~~~i~l~~p~NPtG~~~~~~~l~~i~-~~-~~~li~Deay~~~~-~~~~---  264 (423)
                      ++.     +.+++++.+.        + .++++|++|+. .|.+++.+++.+++ +. + .|++||||..+. +.+.   
T Consensus       255 I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~  332 (720)
T PRK13578        255 IDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMAD  332 (720)
T ss_pred             CChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCccccc
Confidence            454     4488888643        1 58999999987 89999999999984 55 6 999999997643 3221   


Q ss_pred             h----hhhhccCCcEEEEccChhhhcccCcccc-ccccC
Q 014492          265 R----MEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFP  298 (423)
Q Consensus       265 ~----~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~  298 (423)
                      .    ...-.+.+.++++.|.+|.+  +++.-+ ++...
T Consensus       333 ~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk  369 (720)
T PRK13578        333 CSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK  369 (720)
T ss_pred             CChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence            1    11111234569999999975  566544 55553

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.58  E-value=1.8e-12  Score=129.68  Aligned_cols=320  Identities=12%  Similarity=0.131  Sum_probs=192.7

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC----CCCC--CCCCcchHHHHHHHHHHhCC-----CCCcEEEeCCHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQL----KFPY--IYPDPESRRLRAALAKDSGL-----ESDHILVGCGAD  156 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~----~~~~--~Y~~~g~~~lr~~ia~~~g~-----~~~~i~~t~G~~  156 (423)
                      ..+++.+||+..+  ...++ .+|++.+++.+.    .+..  .++.+...+|-+.+++...-     ..+.++++++++
T Consensus        60 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS  139 (472)
T PRK08742         60 GHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS  139 (472)
T ss_pred             eCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence            3557789999777  33343 468888888652    2211  23443455677777776642     236899999999


Q ss_pred             HHHHHHHHHhcC-------C-CCeEEEcCCCchhhHHHHHHC-CC------------eEEEecCCCCC----CC------
Q 014492          157 ELIDLIMRCVLD-------P-GDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDF----SL------  205 (423)
Q Consensus       157 ~al~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~----~~------  205 (423)
                      ++++.+++....       + ..+|+....+|++....+... |.            .+..+|..+.+    +.      
T Consensus       140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~  219 (472)
T PRK08742        140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA  219 (472)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence            999999885421       2 267888888887554333221 11            12333321111    11      


Q ss_pred             --CHHHHHHHhhc--CCceEEEEcC-CCCCcCcCC-CHHHHHH---HHcC-CCEEEEccCCccccCCCch--hhhhccCC
Q 014492          206 --NVELIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESR--MEWVKKHD  273 (423)
Q Consensus       206 --d~~~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~  273 (423)
                        +++.+++.+..  .++.+|++.. .++-.|.+. +.+.+++   +|+. |+++|.||++..|...+..  ....+..+
T Consensus       220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~P  299 (472)
T PRK08742        220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMP  299 (472)
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCC
Confidence              25666776642  4677888875 466678755 4554544   5554 9999999999988643322  12222334


Q ss_pred             cEEEEccChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHH
Q 014492          274 NLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIK  341 (423)
Q Consensus       274 ~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~  341 (423)
                      .+++   ++|.++ .| +.+|.+++++++.+.+..        ....|+.++++.+++.+.|+-   ++.+++..+.-..
T Consensus       300 Div~---~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~  375 (472)
T PRK08742        300 DLLC---LSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAAR  375 (472)
T ss_pred             CEEE---Eccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence            4443   489987 78 489999999999887642        123467788888888887753   2222332222222


Q ss_pred             HHHHHHHHHccCCCCeecCCCceEEEEEeCCC-C-----C-----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---
Q 014492          342 ERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-M-----D-----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---  407 (423)
Q Consensus       342 ~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-~-----~-----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---  407 (423)
                      .+ .+.+.+++.+.+.-....|.++.+++... .     .     ...+.+.+.++||++.+.+     +.|||...   
T Consensus       376 l~-~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~vi~~~PpL~i  449 (472)
T PRK08742        376 MT-QLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG-----DVLYWMPPYCV  449 (472)
T ss_pred             HH-HHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC-----CEEEEECCCCC
Confidence            22 23333455554443456788888877421 0     0     2456777889999998743     58999976   


Q ss_pred             ChhhHHHHHHHHh
Q 014492          408 KPEHTDALMECLM  420 (423)
Q Consensus       408 ~~~~~~~l~~al~  420 (423)
                      ++++.+++.+.++
T Consensus       450 t~~ei~~~~~~l~  462 (472)
T PRK08742        450 DEAQLALLADTTR  462 (472)
T ss_pred             CHHHHHHHHHHHH
Confidence            4444444444443

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.58  E-value=1.8e-12  Score=129.75  Aligned_cols=319  Identities=14%  Similarity=0.173  Sum_probs=193.5

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC---CCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~---~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++.+||+..+.  ..++ .+|+|.+++.+ +.   +..  .+......+|-+.|++.+.-..+.++++++++++++.
T Consensus        52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~  131 (460)
T PRK06916         52 DVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEI  131 (460)
T ss_pred             eCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            34578899987663  3333 46888888865 22   111  2344445678888888775334689999999999999


Q ss_pred             HHHHhcC-------CC-CeEEEcCCCchhhHHHHHH-CCC------------eEEEecCCCC----CC--------CCHH
Q 014492          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVE  208 (423)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~v~~~~~----~~--------~d~~  208 (423)
                      +++....       +| .+|+....+|++....+.. .|-            .+..+|..+.    +.        -+++
T Consensus       132 AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~  211 (460)
T PRK06916        132 AIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE  211 (460)
T ss_pred             HHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence            9885431       33 6788888888764433222 111            1233332111    11        1355


Q ss_pred             HHHHHhhc--CCceEEEEcC-CCCCcCcCC-CHHHHHHH---HcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492          209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (423)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i  278 (423)
                      .+++.++.  .++.+|++.. .+.-.|.+. +.+.++++   |+. |+++|.||++..|...+...  ...+..+.++  
T Consensus       212 ~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv--  289 (460)
T PRK06916        212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM--  289 (460)
T ss_pred             HHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee--
Confidence            66776642  4678888876 466678764 65555554   554 99999999998775333221  1222233333  


Q ss_pred             ccChhhhcccC-ccccccccCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 014492          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFK  348 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~  348 (423)
                       +++|.++ .| +.+|.+++++++.+.+..         ....|+.++++..++.+.|+.-+ -+...++.+++-+++.+
T Consensus       290 -~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-~~~l~~~~~~~g~~l~~  366 (460)
T PRK06916        290 -TAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYE-KTNLIEQVARKTEYVAT  366 (460)
T ss_pred             -eeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence             4689998 78 599999999998877642         12246678888888888775311 01234455555555666


Q ss_pred             HHccC---CCCeecCCCceEEEEEeCCCC--------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014492          349 LLKDV---PFLNPYPSYSNFILCEVTSGM--------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH  411 (423)
Q Consensus       349 ~L~~~---~~~~~~p~~~~~~~~~~~~~~--------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~  411 (423)
                      .|+++   +.+.-....|.++.+++.+..        +   ...+...+.++||++.+.+     +.+|+...   +.++
T Consensus       367 ~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-----~~l~~~Ppl~it~~~  441 (460)
T PRK06916        367 QLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-----NTIVFMPPLASTIDE  441 (460)
T ss_pred             HHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-----CEEEEeCCcccCHHH
Confidence            55543   333223455667667663210        1   2467788889999998753     57899865   3444


Q ss_pred             HHHHHHHH
Q 014492          412 TDALMECL  419 (423)
Q Consensus       412 ~~~l~~al  419 (423)
                      .+++.+++
T Consensus       442 id~~~~~l  449 (460)
T PRK06916        442 LDEMLRIL  449 (460)
T ss_pred             HHHHHHHH
Confidence            44444444

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.58  E-value=1.3e-12  Score=137.30  Aligned_cols=284  Identities=15%  Similarity=0.119  Sum_probs=184.8

Q ss_pred             HHHHHHHHHHhCCCCCcEEEeCCHHHHHHH---HHHHhc-----CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCC
Q 014492          132 RRLRAALAKDSGLESDHILVGCGADELIDL---IMRCVL-----DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF  203 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~---~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~  203 (423)
                      .++.+.+++..|.+.-.+....|++ +-..   +++...     ...+.|+++.-.|......++..|.+++.+|.+.++
T Consensus       533 ~elq~~l~eltGmd~~Sl~p~aGA~-gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G  611 (939)
T TIGR00461       533 AQLEKWLCSITGFDAISLQPNSGAQ-GEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDG  611 (939)
T ss_pred             HHHHHHHHHHHCCCCcccCCchHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCC
Confidence            4788888999998743444444443 3332   223211     123578899999977777788899999999987788


Q ss_pred             CCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCC-HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          204 SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       204 ~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                      .+|+++|++.+++  .++++|++++|+| +|.+-+ .+++.++++. |.++++|.++..-..   ........+-++++.
T Consensus       612 ~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~---~l~~Pg~~GaDi~~~  687 (939)
T TIGR00461       612 NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV---GLTSPGDLGADVCHL  687 (939)
T ss_pred             CcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCC---CCCCccccCCCEEEe
Confidence            9999999999974  4899999999999 899877 9999999988 899999999853111   111113455679999


Q ss_pred             cChhhhcc----cCccccccccCHHHHHHHHHh-----------cC----C---CCCcHHHHHHHHHHhCC--hHHHHHH
Q 014492          280 TFSKRAGL----AGLRVGYGAFPLSIIEYLWRA-----------KQ----P---YNVSVAAEVAACAALQN--PIYLEKV  335 (423)
Q Consensus       280 S~SK~~g~----~G~R~G~i~~~~~~~~~l~~~-----------~~----~---~~~~~~~~~a~~~~l~~--~~~~~~~  335 (423)
                      |.+|.|+.    .|-.+|++.+.+++...+-..           .+    .   ..-+......+..++..  .+.+.+.
T Consensus       688 s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~  767 (939)
T TIGR00461       688 NLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKA  767 (939)
T ss_pred             cCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHH
Confidence            99997652    345578888876544333200           00    0   01111222333333332  4567787


Q ss_pred             HHHHHHHHHHHHHHHccCCCCeecCC-CceE---EEEEeCC-----CCCHHHHHHHHHhCCcEEEeCCCCCCCCe--EEE
Q 014492          336 KEALIKERERLFKLLKDVPFLNPYPS-YSNF---ILCEVTS-----GMDAKKLKDDLAKMGVMIRHYNNKELKGY--VRV  404 (423)
Q Consensus       336 ~~~~~~~~~~l~~~L~~~~~~~~~p~-~~~~---~~~~~~~-----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~--iRi  404 (423)
                      .+..-.+.+++.+.|++.. ..+++. .+.+   +.++++.     +.+..++.++|.++|+..-..+ +...+.  ||.
T Consensus       768 a~~ailnAnYl~~rL~~~~-~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~-~pv~g~lmiep  845 (939)
T TIGR00461       768 SVVAILNANYMATRLKDHY-PILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLS-FPVPGTLMVEP  845 (939)
T ss_pred             HHHHHHHHHHHHHHhhccC-cccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccC-CccCCeEEEEe
Confidence            8877889999999998732 223332 2221   3345542     4678999999999998754433 233444  444


Q ss_pred             Eec-ChhhHHHHHHHHhhh
Q 014492          405 SVG-KPEHTDALMECLMHL  422 (423)
Q Consensus       405 s~~-~~~~~~~l~~al~~l  422 (423)
                      +-. +.+++|+|.+++..|
T Consensus       846 TE~eskeelD~f~~al~~I  864 (939)
T TIGR00461       846 TESESLEELDRFCDAMIAI  864 (939)
T ss_pred             eccCCHHHHHHHHHHHHHH
Confidence            443 455677777777654

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.57  E-value=7.4e-13  Score=131.56  Aligned_cols=318  Identities=17%  Similarity=0.165  Sum_probs=183.7

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC--C----CCCCCCCcchHHHHHHHHH----HhCCCCCcEEEeCCHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQL--K----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE  157 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~--~----~~~~Y~~~g~~~lr~~ia~----~~g~~~~~i~~t~G~~~  157 (423)
                      +.+++.+||+..+.  ..++ .+|.+.+|+.+.  .    ....|+.....++-+.+++    ...-..+.+++++++++
T Consensus        54 D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE  133 (464)
T TIGR00699        54 DVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD  133 (464)
T ss_pred             eCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence            45678899998763  3333 468888888752  1    1122343334456666544    33323368999999999


Q ss_pred             HHHHHHHHhcC--------------------------CC---CeEEEcCCCchhhHHHHHH-CCC-----------eEEE
Q 014492          158 LIDLIMRCVLD--------------------------PG---DKIVDCPPTFTMYEFDAAV-NGA-----------AVVK  196 (423)
Q Consensus       158 al~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~-~g~-----------~~~~  196 (423)
                      |++.+++....                          +|   .+|+....+|++....+.. .|-           ....
T Consensus       134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~  213 (464)
T TIGR00699       134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ  213 (464)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence            99999985421                          11   2699999999754443322 121           1112


Q ss_pred             ecCCC-C--C-----------CCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccC
Q 014492          197 VPRKS-D--F-----------SLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       197 v~~~~-~--~-----------~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Dea  255 (423)
                      +|.+. .  +           .-+++.+++.+.+  .++.+|++.......|.+.+    .++++++|+. |+++|+||+
T Consensus       214 ~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV  293 (464)
T TIGR00699       214 APFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEV  293 (464)
T ss_pred             cCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeee
Confidence            22111 0  0           0135667777743  36788888877777898887    6667777776 999999999


Q ss_pred             CccccCCCch--hhhhccC--CcEEEEccChhhhcccCccccccccCHHHHHHHH--HhcCCCCCcHHHHHHHHHHhCC-
Q 014492          256 YTEFSGLESR--MEWVKKH--DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW--RAKQPYNVSVAAEVAACAALQN-  328 (423)
Q Consensus       256 y~~~~~~~~~--~~~~~~~--~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~l~~-  328 (423)
                      +..|...+..  ....+..  +.+   .+++|.+|..    |+++..+. +....  .....|..++++..++.+.|+. 
T Consensus       294 ~tGfGrtG~~fa~e~~gv~~~PDi---~t~gK~lg~g----G~~~~~~~-~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l  365 (464)
T TIGR00699       294 QTGVGATGKFWAHEHWNLDDPPDM---VTFSKKFQTA----GYFFHDPA-FRPNKPYRQFNTWMGDPSRALILREIIQEI  365 (464)
T ss_pred             eeCCCCCcchhHHHhcCCCCCCCE---EEehhhhccC----Cccccchh-ccCCCCcccccCCCCCHHHHHHHHHHHHHH
Confidence            9877543322  1111111  333   4568988523    44444322 11100  1223466788888777766643 


Q ss_pred             --hHHHHHHHHHHHHHHHHHHHHHccCC-CCeecC--CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014492          329 --PIYLEKVKEALIKERERLFKLLKDVP-FLNPYP--SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR  403 (423)
Q Consensus       329 --~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~p--~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iR  403 (423)
                        ++.++...+.-+..++.|.+..++++ .+....  +.|.++-+++++...+..+.+.+.++||++...+    .+.||
T Consensus       366 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~g----~~~ir  441 (464)
T TIGR00699       366 KRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGCG----VKAIR  441 (464)
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecCC----CCeEE
Confidence              22333333332333333333323355 233223  6678888888643335678888899999997643    47899


Q ss_pred             EEec---ChhhHHHHHHHHh
Q 014492          404 VSVG---KPEHTDALMECLM  420 (423)
Q Consensus       404 is~~---~~~~~~~l~~al~  420 (423)
                      |...   +.++.+.+.++++
T Consensus       442 ~~Ppl~it~~eid~~~~~l~  461 (464)
T TIGR00699       442 LRPMLVFQKHHADIFLEIIS  461 (464)
T ss_pred             EeCCCCCCHHHHHHHHHHHH
Confidence            9976   3444444444444

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN02880 tyrosine decarboxylase

Probab=99.56  E-value=1.8e-12  Score=130.42  Aligned_cols=288  Identities=15%  Similarity=0.122  Sum_probs=180.2

Q ss_pred             HHHHHHHHHhCCCCC-------cEEEeCCHHHHHHHHHHHhcC-----------CCCeEEEcCCCchhhHHHHHHCCCe-
Q 014492          133 RLRAALAKDSGLESD-------HILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGAA-  193 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~-------~i~~t~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~~-  193 (423)
                      ++.+.+++.+|.+.+       .-++|+|+++++..++.+-.+           +.-.|++.+-+|......++..|+. 
T Consensus       126 ~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~  205 (490)
T PLN02880        126 IVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHP  205 (490)
T ss_pred             HHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCH
Confidence            455666666787643       367889988887665543211           1124556778899999999999984 


Q ss_pred             --EEEecCC--CCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-
Q 014492          194 --VVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-  262 (423)
Q Consensus       194 --~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-  262 (423)
                        ++.||.+  .++.+|+++|++++.+.     .|-+|+.+-....||.+-|+++|.++|+. |+|+++|.+|+.+... 
T Consensus       206 ~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~  285 (490)
T PLN02880        206 ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACIC  285 (490)
T ss_pred             HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhC
Confidence              7788865  36789999999998631     25667777888999999999999999998 9999999999976421 


Q ss_pred             Cchhhhhcc-CCcEEEEccChhhhcccCccccccccCH--HHHHHHHHh----cC-------C-----CCC---cHHHHH
Q 014492          263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWRA----KQ-------P-----YNV---SVAAEV  320 (423)
Q Consensus       263 ~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~--~~~~~l~~~----~~-------~-----~~~---~~~~~~  320 (423)
                      +.....+.. ..-.-+..+++|.+ .....+|+++.+.  ...+.+...    ..       .     +++   ..+...
T Consensus       286 ~~~~~~l~gie~aDSit~d~HKwl-~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~al  364 (490)
T PLN02880        286 PEYRHYIDGVEEADSFNMNAHKWF-LTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSL  364 (490)
T ss_pred             HHHHHHhcCchhcCEEEECchhhc-CCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHH
Confidence            111112221 23346778899954 5777888888753  222222110    00       0     110   001111


Q ss_pred             HHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCH-------HHHHHHHHhCCcE
Q 014492          321 AACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDA-------KKLKDDLAKMGVM  389 (423)
Q Consensus       321 a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~-------~~l~~~L~~~gI~  389 (423)
                      .+...|+.  .+.+.+..++.-++.+++.+.|++.+.+.+ .|...+.+.+++++ ..+.       ..+.++|.+.|-.
T Consensus       365 klw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~  444 (490)
T PLN02880        365 KLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKI  444 (490)
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCE
Confidence            22222322  244556666666899999999988766654 45566677777752 2221       3466666655444


Q ss_pred             EEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          390 IRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       390 v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      ........+..++|+++.    +.++.+.+.+.|++
T Consensus       445 ~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~  480 (490)
T PLN02880        445 FISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD  480 (490)
T ss_pred             EEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            433333344679999975    34555666666554

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.56  E-value=1.6e-12  Score=128.72  Aligned_cols=284  Identities=19%  Similarity=0.162  Sum_probs=191.5

Q ss_pred             CCHHHHHHHhc-C----CCCCCCCCcc--hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcC-----C---C--
Q 014492          109 PPPEVREALGQ-L----KFPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD-----P---G--  170 (423)
Q Consensus       109 ~~~~v~~al~~-~----~~~~~Y~~~g--~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~-----~---g--  170 (423)
                      +++...+++.. +    .....||...  ..++-..+++.++.+ .-.-.+|+|+++++.+.+.+...     .   +  
T Consensus        74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~  153 (460)
T COG0076          74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK  153 (460)
T ss_pred             CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            34555555543 2    2223455321  234555556667774 34678999999999877664311     0   1  


Q ss_pred             ----CeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCce-EEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          171 ----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPK-CIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       171 ----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~-~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                          ..|+++.-.|.++...++.+|.....+|.+. ++.+|++++++++.+.... +|+.+-++.+||.+=|+++|.+||
T Consensus       154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia  233 (460)
T COG0076         154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIA  233 (460)
T ss_pred             cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHH
Confidence                1688999999999999999999999999765 7899999999999853333 277778999999999999999999


Q ss_pred             cC-CCEEEEccCCccccC--CCchhh-hhccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHhcCCCC------
Q 014492          245 EM-PILVVLDEAYTEFSG--LESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQPYN------  313 (423)
Q Consensus       245 ~~-~~~li~Deay~~~~~--~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~~~------  313 (423)
                      +. ++++++|.||+.|..  ...... ........-+.-+++| ||+.-..+||++..++ ...+......++.      
T Consensus       234 ~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~  312 (460)
T COG0076         234 EEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIP  312 (460)
T ss_pred             HHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcC
Confidence            98 999999999997652  111112 1222233455678999 6778888999998554 4444443322211      


Q ss_pred             -------CcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCC-HHHHHHH
Q 014492          314 -------VSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMD-AKKLKDD  382 (423)
Q Consensus       314 -------~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~-~~~l~~~  382 (423)
                             -+.....+.+..+..  .+.+.++.++..++.+++.+.|++.+... +.++..+.+.+++++..+ ..+..++
T Consensus       313 ~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~  392 (460)
T COG0076         313 NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSER  392 (460)
T ss_pred             ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHH
Confidence                   112122233333332  35578888888899999999999987444 455678888899864433 4455566


Q ss_pred             HHhCCcEEEeC
Q 014492          383 LAKMGVMIRHY  393 (423)
Q Consensus       383 L~~~gI~v~~~  393 (423)
                      +.+.|..+...
T Consensus       393 ~~~~gw~v~~~  403 (460)
T COG0076         393 LDRRGWQVPAQ  403 (460)
T ss_pred             HHhcCceeecc
Confidence            66677777643

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.55  E-value=6.2e-12  Score=125.81  Aligned_cols=322  Identities=17%  Similarity=0.175  Sum_probs=189.4

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCCC---CcEEEe-CCHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLES---DHILVG-CGADE  157 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~~---~~i~~t-~G~~~  157 (423)
                      ..+++.+||+..+.  ..++ .+|+|.+++.+ +...     ..++.+...+|-+.+.+...-.-   +.++++ +++++
T Consensus        59 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE  138 (464)
T PRK06938         59 DVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD  138 (464)
T ss_pred             eCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence            35578899997763  3344 46888888876 2211     12333334456666666553211   356554 78899


Q ss_pred             HHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC------------CCHHHH
Q 014492          158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS------------LNVELI  210 (423)
Q Consensus       158 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~------------~d~~~l  210 (423)
                      +++.+++...  ....+|+....+|++....+.. .|            ..+..+|.+..+.            .+++.+
T Consensus       139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  218 (464)
T PRK06938        139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL  218 (464)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence            9999988432  1236788888888754433222 11            0223344322111            135677


Q ss_pred             HHHhhc-----CCceEEEEcCCCCCcCcCCC-HHHH---HHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEE
Q 014492          211 ADAVER-----EKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVL  278 (423)
Q Consensus       211 ~~~i~~-----~~~~~i~l~~p~NPtG~~~~-~~~l---~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i  278 (423)
                      ++.+.+     .++.+|++...+.-.|.+.+ .+.+   +++|+. |+++|.||++..|...+...  ...+..+.+++ 
T Consensus       219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~-  297 (464)
T PRK06938        219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV-  297 (464)
T ss_pred             HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE-
Confidence            777753     25788888766655677654 5444   455555 99999999999885433221  12223344443 


Q ss_pred             ccChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----c
Q 014492          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----D  352 (423)
Q Consensus       279 ~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~  352 (423)
                        ++|.+| .|+.+|.+++++++ +.+..  ....|+.++++.+++.+.|+.-+ -++..++.++.-++|.+.|+    +
T Consensus       298 --~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~-~~~l~~~~~~~G~~l~~~L~~l~~~  372 (464)
T PRK06938        298 --LSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK-EHRLAEHAAAMGERLREHLRQLQRD  372 (464)
T ss_pred             --eecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHh
Confidence              589998 78999999988774 43321  22346788898888888875311 11233344444444444443    3


Q ss_pred             CCCCeecCCCceEEEEEeCCC--C---------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014492          353 VPFLNPYPSYSNFILCEVTSG--M---------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL  415 (423)
Q Consensus       353 ~~~~~~~p~~~~~~~~~~~~~--~---------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l  415 (423)
                      .+.+.-..+.|.++.+++.+.  .         +   ...+.+.+.++||++.+.+.  ..+.||+...   +.++.+++
T Consensus       373 ~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~--~~~~l~~~Ppl~it~~eid~~  450 (464)
T PRK06938        373 YPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGR--HGSVVRFLPPLIITAEQIDEV  450 (464)
T ss_pred             CCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCC--CCCEEEEECCCccCHHHHHHH
Confidence            554443456778888877421  0         1   34567778899999986431  2468999865   44455555


Q ss_pred             HHHHh
Q 014492          416 MECLM  420 (423)
Q Consensus       416 ~~al~  420 (423)
                      .++++
T Consensus       451 ~~~l~  455 (464)
T PRK06938        451 AEIFA  455 (464)
T ss_pred             HHHHH
Confidence            55444

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.55  E-value=8.9e-12  Score=127.83  Aligned_cols=281  Identities=11%  Similarity=0.108  Sum_probs=175.6

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC----CC
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF----SL  205 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~----~~  205 (423)
                      ..+.++.+|+.||.+ ...+++||++.++..++.+++.+||.|++...+|-+....+.+.|++++.++.. +.+    .+
T Consensus       197 i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I  275 (713)
T PRK15399        197 HLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGI  275 (713)
T ss_pred             HHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCC
Confidence            568889999999964 578899999999999999999999999999999988888888999999999743 222    34


Q ss_pred             CH-----HHHHHHhhc----CCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEE-EEccCCcccc-CCC-----chhhhh
Q 014492          206 NV-----ELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILV-VLDEAYTEFS-GLE-----SRMEWV  269 (423)
Q Consensus       206 d~-----~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~l-i~Deay~~~~-~~~-----~~~~~~  269 (423)
                      +.     +.+++++.+    .+|++++|++|+. .|.+++.+++.+++  |+.+ ++||||..+. +.+     +.+...
T Consensus       276 ~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~--g~~~ilvDEAhgah~~F~p~~~~~sam~~~  352 (713)
T PRK15399        276 PRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTL--DVPSIHFDSAWVPYTHFHPIYQGKSGMSGE  352 (713)
T ss_pred             ChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHh--CCCEEEEeccchhhhhcCcccCCcChhhCC
Confidence            55     888888864    2347899999955 89999999999888  5655 6999997643 222     111111


Q ss_pred             -ccCCcEEEEccChhhhcccCcccc-ccccCH----HHHHHHHHhcCCCCCcHHHH---HHHHHHhCChHHHHHHHHHHH
Q 014492          270 -KKHDNLIVLRTFSKRAGLAGLRVG-YGAFPL----SIIEYLWRAKQPYNVSVAAE---VAACAALQNPIYLEKVKEALI  340 (423)
Q Consensus       270 -~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~----~~~~~l~~~~~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~  340 (423)
                       .....++++.|.+|.+  +|+.-+ ++....    +.++......++.+++.+..   ..+.+.++.. .-++..+...
T Consensus       353 ~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~-~G~~l~~~~i  429 (713)
T PRK15399        353 RVPGKVIFETQSTHKML--AAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGN-PGKRLINRSV  429 (713)
T ss_pred             CCCCeeeeeeeehhccc--cccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhh-hhHHHHHHHH
Confidence             1122345699999975  566544 444422    22223333334444544432   2333333321 1122233333


Q ss_pred             HHHHHHHHHHccCC-----C-CeecC--------------CCc---------eE-------EEEEeC----------CCC
Q 014492          341 KERERLFKLLKDVP-----F-LNPYP--------------SYS---------NF-------ILCEVT----------SGM  374 (423)
Q Consensus       341 ~~~~~l~~~L~~~~-----~-~~~~p--------------~~~---------~~-------~~~~~~----------~~~  374 (423)
                      +....+++.|.++.     | +.+..              +..         .+       +++..|          .|.
T Consensus       430 ~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi  509 (713)
T PRK15399        430 ERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGI  509 (713)
T ss_pred             HHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCC
Confidence            33333444443322     1 22221              100         01       334443          167


Q ss_pred             CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe--c-ChhhHHHHHHHHhhh
Q 014492          375 DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV--G-KPEHTDALMECLMHL  422 (423)
Q Consensus       375 ~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~--~-~~~~~~~l~~al~~l  422 (423)
                      ++..+.++|.++||.+...+.    ..+=+-+  + +..+.+.|.++|.++
T Consensus       510 ~g~~l~~~L~e~gI~~E~~d~----~~vL~l~s~g~t~~~~~~L~~aL~~f  556 (713)
T PRK15399        510 PAALVAKFLDERGIVVEKTGP----YNLLFLFSIGIDKTKAMGLLRGLTEF  556 (713)
T ss_pred             CHHHHHHHHHHcCCEEEecCC----CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            788999999999999987662    3333333  3 455566777777654

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.55  E-value=2.3e-12  Score=123.12  Aligned_cols=321  Identities=21%  Similarity=0.146  Sum_probs=196.9

Q ss_pred             CCCCCCeeEcCCCCCCC--C-CCHHHHHHHhc-CCCCCCCCCcc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANENPY--G-PPPEVREALGQ-LKFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~~--~-~~~~v~~al~~-~~~~~~Y~~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +.+++.+||+..+..+.  + .+|.|.+|+.+ +..+..|+.|.  .-++-+.+.+.++ ..+.|-++|++|||...+++
T Consensus        49 DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p-~~e~vrfvnSGTEAtmsAiR  127 (432)
T COG0001          49 DVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVP-SIEKVRFVNSGTEATMSAIR  127 (432)
T ss_pred             eCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcC-cccEEEEecchhHHHHHHHH
Confidence            34577888887665543  3 46889999987 45556664443  3456677777776 34789999999999988887


Q ss_pred             Hh--cCCCCeEEEcCCCchhhHHHHHH-CC--CeEEE------ecCCC-C-----CCCCHHHHHHHhhcC--CceEEEEc
Q 014492          165 CV--LDPGDKIVDCPPTFTMYEFDAAV-NG--AAVVK------VPRKS-D-----FSLNVELIADAVERE--KPKCIFLT  225 (423)
Q Consensus       165 ~l--~~~gd~Vl~~~p~y~~~~~~~~~-~g--~~~~~------v~~~~-~-----~~~d~~~l~~~i~~~--~~~~i~l~  225 (423)
                      .-  ....|+|+..+-+|+.....+.. .|  ..-..      +|.+. .     ---|++.+++++++.  ++.+|++.
T Consensus       128 lARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvE  207 (432)
T COG0001         128 LARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVE  207 (432)
T ss_pred             HHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEec
Confidence            32  12248999999999865554433 22  11111      11100 0     023799999999754  78888888


Q ss_pred             -CCCCCcCcCCCHHH----HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          226 -SPNNPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       226 -~p~NPtG~~~~~~~----l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                       -+.| .|.+.|.++    |++|++. |+++|.||+...|........  .-++-.--+.++.|.+| .|+.+|.+-++.
T Consensus       208 Pv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq--~~~gi~PDlttlGKiIG-GGlP~ga~gGr~  283 (432)
T COG0001         208 PVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQ--GYYGVEPDLTTLGKIIG-GGLPIGAFGGRA  283 (432)
T ss_pred             cccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccc--cccCcCcchhhhhhhhc-CCcceeeeccHH
Confidence             4455 688777654    4556665 999999999987764311111  11111123456889998 999999999999


Q ss_pred             HHHHHHHHhcC-----CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCC-CeecCCCceEEEEE
Q 014492          300 SIIEYLWRAKQ-----PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPF-LNPYPSYSNFILCE  369 (423)
Q Consensus       300 ~~~~~l~~~~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~-~~~~p~~~~~~~~~  369 (423)
                      ++++.+.....     .++-|+++..|..+.|+.-...+...+++.+..++|.+.|++    .+. ..+...+++|-+.-
T Consensus       284 eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F  363 (432)
T COG0001         284 EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFF  363 (432)
T ss_pred             HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEe
Confidence            99997765543     256788888888887754221112455555666666665543    332 12333444443221


Q ss_pred             eCC-CC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          370 VTS-GM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       370 ~~~-~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      .+. ..           ....+...|+++||++.|...    ...=+|.. +++++++..++++
T Consensus       364 ~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~----ea~flS~ahte~di~~~~~a~~  423 (432)
T COG0001         364 TEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF----EAGFLSTAHTEEDIDRTLEAAD  423 (432)
T ss_pred             cCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc----cceeeecccCHHHHHHHHHHHH
Confidence            111 11           134456677899999998752    11123433 4555555555544

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.55  E-value=2.3e-12  Score=134.69  Aligned_cols=286  Identities=13%  Similarity=0.101  Sum_probs=179.7

Q ss_pred             HHHHHHHHHHhCCCCCcEEEeCCHHHHHHH--HHHH-hcCC----CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCC
Q 014492          132 RRLRAALAKDSGLESDHILVGCGADELIDL--IMRC-VLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS  204 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~--~~~~-l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~  204 (423)
                      .++++.+++..|.+.-.+...+|++.-+..  +++. .+.+    .++|+++.-.|......+...|.+++.+|.++++.
T Consensus       546 ~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~  625 (954)
T PRK12566        546 DELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGN  625 (954)
T ss_pred             HHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCC
Confidence            478888899999765554444555433222  2222 1222    25778888888655556778999999999877779


Q ss_pred             CCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          205 LNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       205 ~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      +|+++|++.+++  .++.+|++++|++-.+...+.+++.++++. |+++++|.++.....   ........+-+++.+++
T Consensus       626 iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~---~l~~Pg~~GADi~~~s~  702 (954)
T PRK12566        626 VDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV---GLARPADIGADVSHMNL  702 (954)
T ss_pred             cCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc---CCCChhhcCCCEEEecC
Confidence            999999999963  567788888998866666668888888886 999999999862211   11112245567999999


Q ss_pred             hhhhccc----CccccccccCHHHHHHHHHhc---------CCCC------CcHHHHHHHHHHhCC--hHHHHHHHHHHH
Q 014492          282 SKRAGLA----GLRVGYGAFPLSIIEYLWRAK---------QPYN------VSVAAEVAACAALQN--PIYLEKVKEALI  340 (423)
Q Consensus       282 SK~~g~~----G~R~G~i~~~~~~~~~l~~~~---------~~~~------~~~~~~~a~~~~l~~--~~~~~~~~~~~~  340 (423)
                      +|.|+.|    |.-+|.+...+.+...+....         ....      .+.....++...+..  .+ +.+......
T Consensus       703 HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ai  781 (954)
T PRK12566        703 HKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAI  781 (954)
T ss_pred             CcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHH
Confidence            9988633    344555555554443333211         0011      111223333334333  23 555555556


Q ss_pred             HHHHHHHHHHccCCCCeecCCCceE---EEEE---eC--CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Ch
Q 014492          341 KERERLFKLLKDVPFLNPYPSYSNF---ILCE---VT--SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KP  409 (423)
Q Consensus       341 ~~~~~l~~~L~~~~~~~~~p~~~~~---~~~~---~~--~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~  409 (423)
                      .+.+++.+.|.+.-.+...+..+.|   ..++   ++  .+.+..++.++|.++||..... .+...+++||+.+   +.
T Consensus       782 lnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~-~fPv~~~LmIepTE~esk  860 (954)
T PRK12566        782 LSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTM-SFPVPGTLMVEPTESESK  860 (954)
T ss_pred             HHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEE-eeccCCEEEEEeeeeCCH
Confidence            7888999999763222222222221   1122   33  2467888999999999876543 3334789999976   56


Q ss_pred             hhHHHHHHHHhhh
Q 014492          410 EHTDALMECLMHL  422 (423)
Q Consensus       410 ~~~~~l~~al~~l  422 (423)
                      ++.|+|.++++.+
T Consensus       861 eEIDrf~eAL~~I  873 (954)
T PRK12566        861 AELDRFVEAMLSI  873 (954)
T ss_pred             HHHHHHHHHHHHH
Confidence            6778888877654

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.55  E-value=7.1e-12  Score=128.59  Aligned_cols=281  Identities=11%  Similarity=0.128  Sum_probs=178.9

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCC----CC
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF----SL  205 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~----~~  205 (423)
                      ..+.++.+|+.||.+ ...+++||++.++..++.+++.+||.|++...+|-+....+.+.|++++.++.. +.+    .+
T Consensus       197 i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I  275 (714)
T PRK15400        197 HKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGI  275 (714)
T ss_pred             HHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCC
Confidence            568899999999964 578899999999999999999999999999999988888888999999999743 222    33


Q ss_pred             C-----HHHHHHHhhcC-C---ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCC-----chhhhh
Q 014492          206 N-----VELIADAVERE-K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE-----SRMEWV  269 (423)
Q Consensus       206 d-----~~~l~~~i~~~-~---~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~-----~~~~~~  269 (423)
                      +     .+.+++++.+. +   ++.++|++|+. .|.+++.+++.++++. +  |++||||..+. +.+     +.+...
T Consensus       276 ~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~g  352 (714)
T PRK15400        276 PQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGG  352 (714)
T ss_pred             CccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcC
Confidence            4     89999988642 2   33788899955 8999999999999986 5  78999998653 222     122111


Q ss_pred             c-cCCcEEEEccChhhhcccCcccc-cccc----CHHHHHHHHHhcCCCCCcHHHH---HHHHHHhCChHHHHHHHHHHH
Q 014492          270 K-KHDNLIVLRTFSKRAGLAGLRVG-YGAF----PLSIIEYLWRAKQPYNVSVAAE---VAACAALQNPIYLEKVKEALI  340 (423)
Q Consensus       270 ~-~~~~~i~i~S~SK~~g~~G~R~G-~i~~----~~~~~~~l~~~~~~~~~~~~~~---~a~~~~l~~~~~~~~~~~~~~  340 (423)
                      . ..+.++++.|.+|.+  +|+.-+ ++..    +.+.++......++.+++.+..   ..+.+.++.. .-++..+...
T Consensus       353 a~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~-~G~~l~~~~i  429 (714)
T PRK15400        353 RVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGN-AGKRLINGSI  429 (714)
T ss_pred             CCCCCceEEEEchhhcc--cchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhh-hhHHHHHHHH
Confidence            1 124569999999975  565543 4433    2222333333334444444432   3333333321 1223333333


Q ss_pred             HHHHHHHHHHccCCC------CeecCCC-----------------c--------eE-----EEEEeCC----------CC
Q 014492          341 KERERLFKLLKDVPF------LNPYPSY-----------------S--------NF-----ILCEVTS----------GM  374 (423)
Q Consensus       341 ~~~~~l~~~L~~~~~------~~~~p~~-----------------~--------~~-----~~~~~~~----------~~  374 (423)
                      +....+++.|.+++.      +.+....                 |        .+     +.+..|+          |.
T Consensus       430 ~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gi  509 (714)
T PRK15400        430 ERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGI  509 (714)
T ss_pred             HHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccccCC
Confidence            444444444444332      2222100                 0        01     3344432          45


Q ss_pred             CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe--c-ChhhHHHHHHHHhhh
Q 014492          375 DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV--G-KPEHTDALMECLMHL  422 (423)
Q Consensus       375 ~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~--~-~~~~~~~l~~al~~l  422 (423)
                      .+..+.++|.++||.+...+    ...+=+-+  + +..+.+.|.++|.++
T Consensus       510 pg~~v~~~L~e~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f  556 (714)
T PRK15400        510 PASIVAKYLDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDF  556 (714)
T ss_pred             CHHHHHHHHHHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            68889999999999998765    23344433  3 455566677777654

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.52  E-value=8.8e-12  Score=124.67  Aligned_cols=323  Identities=14%  Similarity=0.159  Sum_probs=186.2

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC---C--CCCCcchHHHHHHHHHHhCCC-C--CcEEEeCCHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLE-S--DHILVGCGADEL  158 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~---~--~Y~~~g~~~lr~~ia~~~g~~-~--~~i~~t~G~~~a  158 (423)
                      ..+++.+||+..+.  ..++ .+|++.+++.+ +...   +  .++.+...++-+.+++..+-. .  ..++++++++++
T Consensus        54 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA  133 (459)
T PRK06931         54 DVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA  133 (459)
T ss_pred             eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence            45678899998774  3333 46889888876 2211   1  123333456777777766422 1  234666899999


Q ss_pred             HHHHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCC--------CCHHHH----H
Q 014492          159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS--------LNVELI----A  211 (423)
Q Consensus       159 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~--------~d~~~l----~  211 (423)
                      ++.+++...  ....+|+....+|++....+.. .|            ..+..+|.++.+.        -+.+.+    +
T Consensus       134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (459)
T PRK06931        134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE  213 (459)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence            999988432  2236788888888765544432 11            1123333222111        122333    3


Q ss_pred             HHhhc-----CCceEEEEcCCCCCcCcCCC-HHH---HHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEc
Q 014492          212 DAVER-----EKPKCIFLTSPNNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLR  279 (423)
Q Consensus       212 ~~i~~-----~~~~~i~l~~p~NPtG~~~~-~~~---l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~  279 (423)
                      +.+.+     .++.+|++...+.-.|.+.+ .+.   ++++|+. |+++|.||++..|...+...  ...+..+.++   
T Consensus       214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDiv---  290 (459)
T PRK06931        214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDII---  290 (459)
T ss_pred             HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEE---
Confidence            33321     34788888766665677654 443   4555665 99999999999885433221  1222233333   


Q ss_pred             cChhhhcccCccccccccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       280 S~SK~~g~~G~R~G~i~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      +++|.++ .|+.+|.++..+++ +.+..  ....|+.++++..++.+.|+.   ++.++...+.-...++.|.+..++.+
T Consensus       291 t~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~  368 (459)
T PRK06931        291 VMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP  368 (459)
T ss_pred             Eeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            3589998 78999988777653 44421  223467889988888887753   23333333333333444443334455


Q ss_pred             CCeecCCCceEEEEEeCCCC-----------C---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014492          355 FLNPYPSYSNFILCEVTSGM-----------D---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  417 (423)
Q Consensus       355 ~~~~~p~~~~~~~~~~~~~~-----------~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  417 (423)
                      .+.-....|.++.+++.+..           +   ...+...+.++||++.+.+.  ..+.+|+.++   +.++.+++.+
T Consensus       369 ~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~~Ppl~it~~eid~~~~  446 (459)
T PRK06931        369 CIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGR--NGNVVRLLPPLLITQAECEEFID  446 (459)
T ss_pred             CeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCcCHHHHHHHHH
Confidence            44444567788777773210           1   24566777899999976532  2478999876   3444444444


Q ss_pred             HHh
Q 014492          418 CLM  420 (423)
Q Consensus       418 al~  420 (423)
                      +++
T Consensus       447 ~l~  449 (459)
T PRK06931        447 RFE  449 (459)
T ss_pred             HHH
Confidence            443

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.51  E-value=3e-11  Score=119.33  Aligned_cols=285  Identities=17%  Similarity=0.163  Sum_probs=190.9

Q ss_pred             chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--C----CC
Q 014492          130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--S----DF  203 (423)
Q Consensus       130 g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~----~~  203 (423)
                      -..+.++..|+.+|.+ ...+++||++.++..++.+++.+||.|+++..+|-+.....-+.|+.++.+...  +    -.
T Consensus        71 ~i~eAqe~aA~~fgAd-~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~g  149 (557)
T COG1982          71 PIKEAQELAARVFGAD-HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIG  149 (557)
T ss_pred             cHHHHHHHHHHHhCCC-ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccC
Confidence            3568899999999964 477899999999999999999999999999999988888888899999988732  2    24


Q ss_pred             CCCHHHHHHHhhc-CCc-eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc-hhhhhccCCcEEEEc
Q 014492          204 SLNVELIADAVER-EKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLR  279 (423)
Q Consensus       204 ~~d~~~l~~~i~~-~~~-~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~  279 (423)
                      +++.+.+++++.+ ... |+++++||+. .|++++.+++.+.+.. ++|+.+|+++........ ........+.+++..
T Consensus       150 gI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tq  228 (557)
T COG1982         150 GIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQ  228 (557)
T ss_pred             CCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEe
Confidence            6899999987753 344 7889899887 8999999999999887 999999999875442211 122222367789999


Q ss_pred             cChhhhcccCcccc-ccccCH------HHHHHHHHhcCCCCCcHHHHHH---HHHHhCC--hHHHHHHHHHHHHHHHHHH
Q 014492          280 TFSKRAGLAGLRVG-YGAFPL------SIIEYLWRAKQPYNVSVAAEVA---ACAALQN--PIYLEKVKEALIKERERLF  347 (423)
Q Consensus       280 S~SK~~g~~G~R~G-~i~~~~------~~~~~l~~~~~~~~~~~~~~~a---~~~~l~~--~~~~~~~~~~~~~~~~~l~  347 (423)
                      |.+|.+  +++.-+ ++..+.      +-+.......+..+++.+..+.   +......  ...+++.....-+.|+.+.
T Consensus       229 S~HK~l--~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~  306 (557)
T COG1982         229 STHKLL--AALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALR  306 (557)
T ss_pred             chhhhh--hhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            999976  455544 555542      2222222223333343332222   2222211  1234445566666777777


Q ss_pred             HHHccCCCCeecCCC------c----------eE------EEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014492          348 KLLKDVPFLNPYPSY------S----------NF------ILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV  404 (423)
Q Consensus       348 ~~L~~~~~~~~~p~~------~----------~~------~~~~~~-~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi  404 (423)
                      +..++++|+.++...      +          .+      +.+..| .|..+..+..+|+++||...-.+.  ....+=+
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~d--~~~lll~  384 (557)
T COG1982         307 RLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETGD--YSNLLLF  384 (557)
T ss_pred             HHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeecCC--ceeeEEe
Confidence            777777766543211      1          11      334443 388999999999999998876552  1122333


Q ss_pred             Eec---ChhhHHHHHHHHh
Q 014492          405 SVG---KPEHTDALMECLM  420 (423)
Q Consensus       405 s~~---~~~~~~~l~~al~  420 (423)
                      +.+   .....+.|.++.+
T Consensus       385 ~~~~gk~~~lv~~L~~f~r  403 (557)
T COG1982         385 SPGIGKWQTLVDRLLEFKR  403 (557)
T ss_pred             eeccchHHHHHHHHHHHHH
Confidence            333   3445566666665

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.50  E-value=1.8e-11  Score=130.88  Aligned_cols=265  Identities=15%  Similarity=0.090  Sum_probs=179.2

Q ss_pred             HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCC--CCeEEEcCCCchhhHHH----HHHCCCeEEEecCCCCCC
Q 014492          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDP--GDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFS  204 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~--gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~  204 (423)
                      .++++.++++.|.+..++.+..+++++.+.++.++ ..+  +++|++++..|+.....    ++..|++++.++.+.+  
T Consensus       124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--  201 (954)
T PRK05367        124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--  201 (954)
T ss_pred             HHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--
Confidence            37889999999999999999999999999888766 344  38999999999865543    4568999999996432  


Q ss_pred             CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChh
Q 014492          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK  283 (423)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK  283 (423)
                      ++         ..++.++++.+|+ -+|.+.+.+++.++++. |+++++|....-+....    .....+-++++++..|
T Consensus       202 ~~---------~~~~~~vlvq~p~-~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~----~pge~GaDi~vgs~qk  267 (954)
T PRK05367        202 LD---------HDDVFGVLLQYPG-TSGEVRDYTALIAAAHARGALVAVAADLLALTLLT----PPGEMGADIAVGSAQR  267 (954)
T ss_pred             CC---------cccEEEEEEecCC-CCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCC----ChhhcCCCEEEeeCcc
Confidence            11         2356566666775 59999999999999987 99999987553222211    1234556689999998


Q ss_pred             h-----hcccCccccccccCHHHHHHHHHh-c---------C----------------CCCCcHHH---HHHHHH----H
Q 014492          284 R-----AGLAGLRVGYGAFPLSIIEYLWRA-K---------Q----------------PYNVSVAA---EVAACA----A  325 (423)
Q Consensus       284 ~-----~g~~G~R~G~i~~~~~~~~~l~~~-~---------~----------------~~~~~~~~---~~a~~~----~  325 (423)
                      .     ||-||  .|++.+.+++.+.+.-. .         .                ..+.|...   ..++.+    .
T Consensus       268 fg~P~g~GGP~--aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~  345 (954)
T PRK05367        268 FGVPMGFGGPH--AAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAV  345 (954)
T ss_pred             cCCCCCCCCCC--EEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHH
Confidence            5     44344  89999888877655310 0         0                01111111   111111    1


Q ss_pred             hCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492          326 LQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS  405 (423)
Q Consensus       326 l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis  405 (423)
                      +..+..+++..++...+..++.+.|++.++....+.....+.++++  .++.++.++|.++||.++...    ++.+|||
T Consensus       346 ~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~--~~~~~i~~~l~~~gi~~~~~~----~~~l~is  419 (954)
T PRK05367        346 YHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVG--GDAAAVLARALAAGINLRRVD----DDHVGIS  419 (954)
T ss_pred             HHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCC--CCHHHHHHHHHHCCceecccc----CCEEEEE
Confidence            1234568888899999999999999875432222222223445553  478999999999999995543    4689999


Q ss_pred             ec---ChhhHHHHHHHHh
Q 014492          406 VG---KPEHTDALMECLM  420 (423)
Q Consensus       406 ~~---~~~~~~~l~~al~  420 (423)
                      +.   +.++++.|.+++.
T Consensus       420 ~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        420 LDETTTREDLAALLAVFG  437 (954)
T ss_pred             ecccCCHHHHHHHHHHHc
Confidence            86   4555666666553

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.49  E-value=1.5e-11  Score=117.94  Aligned_cols=304  Identities=13%  Similarity=0.039  Sum_probs=199.0

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhc-C-C----------CCCCCCCcc--hHHHHHHHHHHhCCCC-CcE-EEeCCHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLES-DHI-LVGCGADELIDL  161 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~Y~~~g--~~~lr~~ia~~~g~~~-~~i-~~t~G~~~al~~  161 (423)
                      +.|+.|.  ...|++|++++++ + +          ..|+-+...  ..++++.+.+.++++. .+| ++..|++.++++
T Consensus         6 ~nF~aGP--a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea   83 (364)
T PRK12462          6 LNFSGGP--GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSM   83 (364)
T ss_pred             ceecCCC--cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHH
Confidence            4555443  3346788877764 1 1          123333332  4578888888999843 245 556669999999


Q ss_pred             HHHHhcCCCCeEE--EcCCCch-hhHHHHHHCCCeEEEecC----CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          162 IMRCVLDPGDKIV--DCPPTFT-MYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       162 ~~~~l~~~gd~Vl--~~~p~y~-~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      +...++.+||+++  +..-.|. .+...++.+| ++..+..    +.+..++++.+  .+. .+.+.|.+|+-...||+.
T Consensus        84 ~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~-~d~~~v~~t~NETstGv~  159 (364)
T PRK12462         84 IPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD-ARAPFRHYVSNETVEGLQ  159 (364)
T ss_pred             HHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC-CCCcEEEEccCCCCceEe
Confidence            9999999999654  5555554 4445566666 4444431    12234556665  222 467889999999999999


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-----
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-----  308 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-----  308 (423)
                      ++     ++.+. +.++|+|.+=..+.. +-.   ++++  .++..+.-|.+|.||  ++.++.+++.+++..+.     
T Consensus       160 ~~-----~~~~~~~~llvvD~sS~~~s~-pid---~~~~--dvi~agsQKnlgP~G--ltvvivs~~al~~~~~~~p~~l  226 (364)
T PRK12462        160 FP-----DAAGLPDSPLIADMSSDFMSR-PFD---VEAY--GMVYAHAQKNLGPAG--VTVAIIRRALLERVPDTLPPML  226 (364)
T ss_pred             cC-----cccccCCCeEEEEcCchhhCC-CCC---hHHc--cEEEeeccccCCCCc--eEEEEECHHHHhhccccCCchh
Confidence            87     33333 889999988664332 111   2223  477777899999888  57788888887654321     


Q ss_pred             ---------cCCCCCcHHHHHHHHHHhCC--hH--HHHHHHHHHHHHHHHHHHHHccCCCCeec---C--CCceEEEEEe
Q 014492          309 ---------KQPYNVSVAAEVAACAALQN--PI--YLEKVKEALIKERERLFKLLKDVPFLNPY---P--SYSNFILCEV  370 (423)
Q Consensus       309 ---------~~~~~~~~~~~~a~~~~l~~--~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p--~~~~~~~~~~  370 (423)
                               ..+++++....+++..+|+.  .+  .++.+.++.++..+.+++.+++.++....   +  ..-+-+.+++
T Consensus       227 dy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~  306 (364)
T PRK12462        227 DFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRF  306 (364)
T ss_pred             hHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEc
Confidence                     11235667777777666553  23  67888999999999999999998744321   2  2234566777


Q ss_pred             CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          371 TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       371 ~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      ++....++|.+.+.++|+.-..|..  .-|.+|+|+   ...+..+.|.+.++.+
T Consensus       307 ~~~~l~~~f~~~a~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~f  359 (364)
T PRK12462        307 RQPRLDTLFKEQSTEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKDF  359 (364)
T ss_pred             CCHHHHHHHHHHHHHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence            6555567788888899988766542  245699996   2566778888888765

>PLN02590 probable tyrosine decarboxylase

Probab=99.49  E-value=1.1e-11  Score=124.79  Aligned_cols=288  Identities=14%  Similarity=0.092  Sum_probs=180.0

Q ss_pred             HHHHHHHHHhCCCC-------CcEEEeCCHHHHHHHHHHHhcC-----------CCCeEEEcCCCchhhHHHHHHCCC--
Q 014492          133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGA--  192 (423)
Q Consensus       133 ~lr~~ia~~~g~~~-------~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~g~--  192 (423)
                      ++.+.+++.+|++.       ..-++++|+++++..++.+-.+           +.-.|++.+.+|......++..|+  
T Consensus       174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~  253 (539)
T PLN02590        174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE  253 (539)
T ss_pred             HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc
Confidence            35555566668764       2357788898887665543211           112455678889999999999988  


Q ss_pred             -eEEEecCC--CCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-C
Q 014492          193 -AVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-L  262 (423)
Q Consensus       193 -~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~  262 (423)
                       +++.||.+  .++.+|+++|+++|.+.     .|-+|+.+-....||.+-|+++|.+||+. |+|+.+|.+|+.+.. .
T Consensus       254 ~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~  333 (539)
T PLN02590        254 ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACIC  333 (539)
T ss_pred             ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcC
Confidence             58888876  46789999999999632     35567777888899999999999999998 999999999997652 1


Q ss_pred             Cchhhhhcc-CCcEEEEccChhhhcccCccccccccCH--HHHHHHHH------hcC--------C--CC--Cc-HHHHH
Q 014492          263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLWR------AKQ--------P--YN--VS-VAAEV  320 (423)
Q Consensus       263 ~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~--~~~~~l~~------~~~--------~--~~--~~-~~~~~  320 (423)
                      +.....+.. ....=+...++|. +....-+|.++...  .+.+.+..      ...        .  |+  .+ .+...
T Consensus       334 ~~~r~~~~Gie~ADSit~D~HK~-l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raL  412 (539)
T PLN02590        334 PEYRKFIDGIENADSFNMNAHKW-LFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSL  412 (539)
T ss_pred             hhhHHHhcCCccCCEEEECchhh-cCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHH
Confidence            221121211 1122455678995 45777788777753  22222210      000        0  11  11 12222


Q ss_pred             HHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCC-------HHHHHHHHHhCCcE
Q 014492          321 AACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMD-------AKKLKDDLAKMGVM  389 (423)
Q Consensus       321 a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~-------~~~l~~~L~~~gI~  389 (423)
                      .+...|+.  .+.++++.++.-++.+++.+.|++.+.+.+ .+..-+.+.+++.. +.+       ..++.++|.+.|..
T Consensus       413 klW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~  492 (539)
T PLN02590        413 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKI  492 (539)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCE
Confidence            23333332  345778888888899999999988876664 44455556666642 222       13566677666765


Q ss_pred             EEeCCCCCCCCeEEEEecC-hhhHHHHHHHHhh
Q 014492          390 IRHYNNKELKGYVRVSVGK-PEHTDALMECLMH  421 (423)
Q Consensus       390 v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~~  421 (423)
                      ......-.+..++|+++.. ..+.+++..+++.
T Consensus       493 ~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~  525 (539)
T PLN02590        493 FISHTALSGKFVLRFAVGAPLTEEKHVTEAWQI  525 (539)
T ss_pred             EEEeeEECCEEEEEEEecCCCCCHHHHHHHHHH
Confidence            5544433445699999852 2223444444443

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.48  E-value=2.8e-11  Score=120.60  Aligned_cols=315  Identities=14%  Similarity=0.142  Sum_probs=179.7

Q ss_pred             CCCCeeEcCCC--CCCCC-CCHHHHH--HHhc-CC-----CC--CCCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDAN--ENPYG-PPPEVRE--ALGQ-LK-----FP--YIYPDPESRRLRAALAKDSG-LESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~~--al~~-~~-----~~--~~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~a  158 (423)
                      +++.++|+..+  ...++ .+|+|.+  ++.+ +.     ..  ..|......++-+.+++..+ -..+.++++++++|+
T Consensus        43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA  122 (443)
T PRK08297         43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA  122 (443)
T ss_pred             CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence            57788998766  33344 3678887  7765 21     11  12333344566677776652 234699999999999


Q ss_pred             HHHHHHHhc----------C---C-CCeEEEcCCCchhhHHHHHH-CCCeE-----------EEecCCC------CCC--
Q 014492          159 IDLIMRCVL----------D---P-GDKIVDCPPTFTMYEFDAAV-NGAAV-----------VKVPRKS------DFS--  204 (423)
Q Consensus       159 l~~~~~~l~----------~---~-gd~Vl~~~p~y~~~~~~~~~-~g~~~-----------~~v~~~~------~~~--  204 (423)
                      ++.+++...          .   + ..+|+....+|++....+-. .|...           ..+|...      +..  
T Consensus       123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (443)
T PRK08297        123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE  202 (443)
T ss_pred             HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence            999998542          1   1 25799889888755443332 22110           0011000      000  


Q ss_pred             -------CCHHHHHHHhhc--CCceEEEEcCCCCCcCcC-CCHHHHHH---HHcC-CCEEEEccCCccccCCCchh--hh
Q 014492          205 -------LNVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EW  268 (423)
Q Consensus       205 -------~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~  268 (423)
                             -+++++++.+.+  .++.+|++...+...|.+ .|.+.+++   +|+. |+++|.||++..|...+...  ..
T Consensus       203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~  282 (443)
T PRK08297        203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ  282 (443)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence                   023555666642  568888888666666765 45555554   5554 99999999998875433221  12


Q ss_pred             hccCCcEEEEccChhhhcccCccccccccCHHHHHHH---H----HhcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHH
Q 014492          269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL---W----RAKQPYNVSVAAEVAACAALQN---PIYLEKVKEA  338 (423)
Q Consensus       269 ~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l---~----~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~  338 (423)
                      .+..+.++   +++|.+++     |.++..+++.+..   .    .....|+.++++..++.+.|+-   ++.+++..+.
T Consensus       283 ~gv~PDiv---~~gK~l~~-----~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~  354 (443)
T PRK08297        283 LGVRPDIV---AFGKKTQV-----CGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQ  354 (443)
T ss_pred             cCCCCCEE---Eecccccc-----cceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            22233333   36898642     3333344332211   1    1223467788888888877763   2334444444


Q ss_pred             HHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC---hhhHHH
Q 014492          339 LIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK---PEHTDA  414 (423)
Q Consensus       339 ~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~---~~~~~~  414 (423)
                      -+..++.|.+..++.+.+. -..+.|.++.+++++......+++.|.++||++.+.+    .+.+||+++.   .++.++
T Consensus       355 g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~----~~~lr~~P~l~~t~~eid~  430 (443)
T PRK08297        355 GEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG----ERSIRFRPALTVTTEEIDA  430 (443)
T ss_pred             HHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCC----CCeEEEECCccCCHHHHHH
Confidence            3444444444333445332 2235678888888643345678888899999998754    3679997653   344444


Q ss_pred             HHHHH
Q 014492          415 LMECL  419 (423)
Q Consensus       415 l~~al  419 (423)
                      +.+++
T Consensus       431 ~l~~l  435 (443)
T PRK08297        431 AIDAL  435 (443)
T ss_pred             HHHHH
Confidence            44444

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.46  E-value=5.6e-12  Score=116.87  Aligned_cols=192  Identities=21%  Similarity=0.267  Sum_probs=127.8

Q ss_pred             HHHHHHHhcC-------C--CCCCCCCcchHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHHhcCCCCeEEE-cCC
Q 014492          111 PEVREALGQL-------K--FPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVD-CPP  178 (423)
Q Consensus       111 ~~v~~al~~~-------~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~--t~G~~~al~~~~~~l~~~gd~Vl~-~~p  178 (423)
                      ..|++|+++.       .  .+++|.|.|-+.|++-.|+.||.+ +.++=  --++|+||..++..+++|||+.+. .-.
T Consensus        27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE-~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~  105 (403)
T PF06838_consen   27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAE-DALVRPQFVSGTHAIALALFGVLRPGDELLSITGK  105 (403)
T ss_dssp             HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-S-EEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS
T ss_pred             HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCch-hhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCC
Confidence            4566777652       1  236678888899999999999953 23331  235678999999999999999884 444


Q ss_pred             CchhhHHHH----------HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-
Q 014492          179 TFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM-  246 (423)
Q Consensus       179 ~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-  246 (423)
                      -|.......          +.+|++...+++.++..+|.+.++++++ +++|+++|. +--.-+=..++.++|+++++. 
T Consensus       106 PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~v  184 (403)
T PF06838_consen  106 PYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFV  184 (403)
T ss_dssp             --CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE-S-TTSSS----HHHHHHHHHHH
T ss_pred             chhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEecCCCCCCCCCCCHHHHHHHHHHH
Confidence            454444333          4578999999988888999999999998 799999997 655555566889999999874 


Q ss_pred             -----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcc--ccccccCHHHHHHHHHhc
Q 014492          247 -----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLWRAK  309 (423)
Q Consensus       247 -----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R--~G~i~~~~~~~~~l~~~~  309 (423)
                           ++++++|.+|.+|.....+...    +..++.+|+=|..| .|+-  -||+++.++++++.....
T Consensus       185 k~~~p~~iifVDNCYGEFvE~~EP~~v----GADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RL  249 (403)
T PF06838_consen  185 KEINPDVIIFVDNCYGEFVETQEPTEV----GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRL  249 (403)
T ss_dssp             HHH-TTSEEEEE-TTTTTTSSS-GGGG----T-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHH
T ss_pred             HhhCCCeEEEEeCCcceeccccCcccc----chhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhh
Confidence                 8999999999999865443332    33499999999876 4432  379999999999876543

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.46  E-value=3.1e-11  Score=128.59  Aligned_cols=299  Identities=15%  Similarity=0.130  Sum_probs=192.6

Q ss_pred             CCCCCCCCCCHHHHHHHhcCC-CC---CCC-CC--cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cC
Q 014492          101 DANENPYGPPPEVREALGQLK-FP---YIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LD  168 (423)
Q Consensus       101 ~~~~~~~~~~~~v~~al~~~~-~~---~~Y-~~--~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~  168 (423)
                      +.|..+.-.|+.+.+++.+.. ..   +.| |.  .|    ..+++..++++.|++++++.++.|++.+.+.++.++ +.
T Consensus       109 G~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~  188 (993)
T PLN02414        109 GMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIL  188 (993)
T ss_pred             CCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcc
Confidence            334444445667767776532 11   334 32  12    347899999999999999999999999999887666 34


Q ss_pred             CC--CeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          169 PG--DKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       169 ~g--d~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      +|  ++|++++..|+.+...+    +..|++++.++.+..   +      ... ..+-.+++.+|++ +|.+.+.+++.+
T Consensus       189 ~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~-~~v~~vlvq~P~~-~G~v~dv~~I~~  257 (993)
T PLN02414        189 KGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS-GDVCGVLVQYPAT-DGEVLDYAEFVK  257 (993)
T ss_pred             cCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc-CceEEEEEecCCC-CeEEcCHHHHHH
Confidence            44  78999999998665444    457999999985321   1      111 2344555556654 999999999999


Q ss_pred             HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhh---cccCccccccccCHHHHHHHH-Hhc--------
Q 014492          243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA---GLAGLRVGYGAFPLSIIEYLW-RAK--------  309 (423)
Q Consensus       243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~---g~~G~R~G~i~~~~~~~~~l~-~~~--------  309 (423)
                      +++. |+++++ .++.....   ........+-++++++..|..   |..|-+.|++.+.+++.+.+. +..        
T Consensus       258 ~ah~~GaL~iV-aad~lal~---~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g  333 (993)
T PLN02414        258 NAHANGVKVVM-ATDLLALT---MLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSG  333 (993)
T ss_pred             HHHHcCCEEEE-EECHHHhc---CCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCC
Confidence            9987 999998 44432111   111133455668899988843   123555899998887755432 000        


Q ss_pred             -C----------------CCCCcHHHHHHHHHHhC-------ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE
Q 014492          310 -Q----------------PYNVSVAAEVAACAALQ-------NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF  365 (423)
Q Consensus       310 -~----------------~~~~~~~~~~a~~~~l~-------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~  365 (423)
                       .                ..+.|..+..++.+++.       .+..+++..+++.++..++.+.|++.++....+....-
T Consensus       334 ~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~  413 (993)
T PLN02414        334 KPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDT  413 (993)
T ss_pred             CcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCe
Confidence             0                11223322222222221       23447788899999999999999887632223322223


Q ss_pred             EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          366 ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       366 ~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +.++++   +..++.++|.++||.++...    .+.+|+|+.   +.+|++.|.+++..
T Consensus       414 vt~~~~---~~~~v~~~L~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~~  465 (993)
T PLN02414        414 VKVKCS---DADAIADAAAKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFAG  465 (993)
T ss_pred             EEEecC---CHHHHHHHHHHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence            455664   56889999999999888654    467999975   56777888877753

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.46  E-value=1.6e-11  Score=122.17  Aligned_cols=318  Identities=13%  Similarity=0.135  Sum_probs=177.7

Q ss_pred             CCCCeeEcCCC--CCCCC-CCHHHH--HHHhc-CCCC----C---CCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDAN--ENPYG-PPPEVR--EALGQ-LKFP----Y---IYPDPESRRLRAALAKDSG-LESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~--~al~~-~~~~----~---~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~a  158 (423)
                      +++.+||+..+  ...++ .+|.+.  +++.+ +...    .   .+......++-+.+++..+ -..+.+++++++++|
T Consensus        36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA  115 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA  115 (431)
T ss_pred             CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence            57788888766  33344 357887  77765 2211    1   1222223445555555542 134689999999999


Q ss_pred             HHHHHHHhc----------C-C---CCeEEEcCCCchhhHHHHHH-CCCe-EE------------Eec-----CCCC-CC
Q 014492          159 IDLIMRCVL----------D-P---GDKIVDCPPTFTMYEFDAAV-NGAA-VV------------KVP-----RKSD-FS  204 (423)
Q Consensus       159 l~~~~~~l~----------~-~---gd~Vl~~~p~y~~~~~~~~~-~g~~-~~------------~v~-----~~~~-~~  204 (423)
                      ++.+++...          + +   +.+|+...-+|++....+.. .|.. ..            ..|     .+.. ..
T Consensus       116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  195 (431)
T TIGR03251       116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD  195 (431)
T ss_pred             HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence            999988542          1 1   36799888888755433322 2211 00            011     0000 00


Q ss_pred             -------CCHHHHHHHhh--cCCceEEEEcCCCCCcCcCC-CHHHHHH---HHcC-CCEEEEccCCccccCCCchh--hh
Q 014492          205 -------LNVELIADAVE--REKPKCIFLTSPNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRM--EW  268 (423)
Q Consensus       205 -------~d~~~l~~~i~--~~~~~~i~l~~p~NPtG~~~-~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~--~~  268 (423)
                             -+++++++.+.  ..++.++++...+...|.+. +.+.+++   +|+. |+++|+||++..|...+...  ..
T Consensus       196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~  275 (431)
T TIGR03251       196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ  275 (431)
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence                   12445555553  25788999887777778765 4444544   5554 99999999999775433221  12


Q ss_pred             hccCCcEEEEccChhhhcccCccccccccCH--HHHHHHH----HhcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHH
Q 014492          269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLW----RAKQPYNVSVAAEVAACAALQN---PIYLEKVKEAL  339 (423)
Q Consensus       269 ~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~--~~~~~l~----~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~  339 (423)
                      .+..+.++   +++|.+  +.  .|++....  ++.....    .....|+.++++..++.++|+.   .+..+...+.-
T Consensus       276 ~gv~PDi~---~~gK~~--~~--~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g  348 (431)
T TIGR03251       276 LGVQPDIV---AFGKKT--QV--CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQG  348 (431)
T ss_pred             cCCCCCEE---EecccC--cc--ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            22233333   368875  22  25554332  2222111    1223467788888888877764   23334444444


Q ss_pred             HHHHHHHHHHHccCC-CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHH
Q 014492          340 IKERERLFKLLKDVP-FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC  418 (423)
Q Consensus       340 ~~~~~~l~~~L~~~~-~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~a  418 (423)
                      +..++.|.+..++.+ .+.-..+.|.++.+++++......+.+.|.++||++.+.+    .+.+||++....+.++++++
T Consensus       349 ~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g----~~~lr~~P~l~~t~~eid~~  424 (431)
T TIGR03251       349 AHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCG----ERSIRFRPPLTVTREEIDAA  424 (431)
T ss_pred             HHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCC----CCeEEEECCccCCHHHHHHH
Confidence            445555544334444 2222245577888888643345678888999999997754    36799987643333445544


Q ss_pred             Hhh
Q 014492          419 LMH  421 (423)
Q Consensus       419 l~~  421 (423)
                      ++.
T Consensus       425 l~~  427 (431)
T TIGR03251       425 IDA  427 (431)
T ss_pred             HHH
Confidence            444

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.44  E-value=4.8e-11  Score=110.96  Aligned_cols=322  Identities=16%  Similarity=0.143  Sum_probs=204.3

Q ss_pred             CCCCCCeeEcCCCCCC--C-CCCHHHHHHHhc-CC----CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDANENP--Y-GPPPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~-~~~~~v~~al~~-~~----~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +..++.++|+-.|...  . ..+|+|.+++.+ ..    ....|-.+-..++-++++..+.-+-+.++++|+++||.+++
T Consensus        46 De~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANela  125 (442)
T KOG1404|consen   46 DEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELA  125 (442)
T ss_pred             cCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHH
Confidence            4556777887776432  2 457999988876 21    12456555567888999988865567799999999999999


Q ss_pred             HHHhc--CCCCeEEEcCCCchhhHH-HHHHCCCeEEEecCCCC----------------CCCC---------HHHHHHHh
Q 014492          163 MRCVL--DPGDKIVDCPPTFTMYEF-DAAVNGAAVVKVPRKSD----------------FSLN---------VELIADAV  214 (423)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~~v~~~~~----------------~~~d---------~~~l~~~i  214 (423)
                      +....  ...-.++...-+|+.... .+-..|......+.+..                |+-+         .+++++.+
T Consensus       126 l~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i  205 (442)
T KOG1404|consen  126 LKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI  205 (442)
T ss_pred             HHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence            87432  112356666777753332 22222332222211100                0001         13444444


Q ss_pred             h---cCCceEEEEcCCCCCcCcCCC-HHHH---HHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492          215 E---REKPKCIFLTSPNNPDGSIIN-DEDL---LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       215 ~---~~~~~~i~l~~p~NPtG~~~~-~~~l---~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      .   .+.+.+++....+..-|++-. ..-+   .++++. |.+.|.||++..|...+ .+..++.++.+--+.|++|.+|
T Consensus       206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiG  284 (442)
T KOG1404|consen  206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIG  284 (442)
T ss_pred             HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhcc
Confidence            2   245667777777877787653 3344   455555 99999999999998766 4444556666667889999999


Q ss_pred             ccCccccccccCHHHHHHHHHhcC---CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeec
Q 014492          287 LAGLRVGYGAFPLSIIEYLWRAKQ---PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPY  359 (423)
Q Consensus       287 ~~G~R~G~i~~~~~~~~~l~~~~~---~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~  359 (423)
                       .|+.+|.++..+++.+-+.+...   .|+.++++.+++.++|+--+ -++++++.++.-.+|.+.|.++    +.+--.
T Consensus       285 -nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vik-ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV  362 (442)
T KOG1404|consen  285 -NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK-EENLQENAAEVGSYLLEKLAALKDKHPIIGDV  362 (442)
T ss_pred             -CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhcCCceeec
Confidence             89999999999999998887663   35678888888888886421 1334444455555666655543    333224


Q ss_pred             CCCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014492          360 PSYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  417 (423)
Q Consensus       360 p~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  417 (423)
                      .+.|.++-+++-+..         ....+.+.++++|++|-.++..+  +.+||+..   +.+|.+.+.+
T Consensus       363 RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G--~vfriaPPlciT~edi~f~~~  430 (442)
T KOG1404|consen  363 RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG--NVFRIAPPLCITKEDIDFAVE  430 (442)
T ss_pred             ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc--eEEEecCCeeccHHHHHHHHH
Confidence            567888877774211         13456788889999995555332  39999864   4444444433

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.43  E-value=8.2e-11  Score=118.76  Aligned_cols=271  Identities=13%  Similarity=0.083  Sum_probs=170.5

Q ss_pred             EEEeCCHHHHHHHHHHHh----cC----------------------CCCeEEEcCCCchhhHHHHHHCCC---eEEEecC
Q 014492          149 ILVGCGADELIDLIMRCV----LD----------------------PGDKIVDCPPTFTMYEFDAAVNGA---AVVKVPR  199 (423)
Q Consensus       149 i~~t~G~~~al~~~~~~l----~~----------------------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~  199 (423)
                      -++|+|+++++-.++.+-    +.                      ++..|++..-.|......++..|.   +++.+|.
T Consensus       162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~  241 (522)
T TIGR03799       162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT  241 (522)
T ss_pred             eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence            577889998876665432    11                      124688888899999999999888   7899998


Q ss_pred             CCCCCCCHHHHHHHhhc---CCceEEEEc--CCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-Cchhhhhcc-
Q 014492          200 KSDFSLNVELIADAVER---EKPKCIFLT--SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKK-  271 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~---~~~~~i~l~--~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~~~~-  271 (423)
                      ++++.+|+++|++.+.+   .+++.+.++  ..++.||.+.|++++.++|+. |+++++|.+|+..... +.....+.. 
T Consensus       242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl  321 (522)
T TIGR03799       242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI  321 (522)
T ss_pred             CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc
Confidence            88889999999998852   345545444  667899999999999999997 9999999999854321 111111221 


Q ss_pred             CCcEEEEccChhhhcccCccccccccC-HHHHHHHHHh----cC-------C--CCCcHHH-HHHHHHHhCC--hHHHHH
Q 014492          272 HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA----KQ-------P--YNVSVAA-EVAACAALQN--PIYLEK  334 (423)
Q Consensus       272 ~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~----~~-------~--~~~~~~~-~~a~~~~l~~--~~~~~~  334 (423)
                      ..-..+..+.+|.++ ....+|+++.. ++..+.+...    ..       .  +..+... ...+..+|+.  .+.+++
T Consensus       322 e~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~  400 (522)
T TIGR03799       322 ERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYEL  400 (522)
T ss_pred             hhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHH
Confidence            233467788999543 44557888774 4444443221    00       0  1111111 1123333332  345788


Q ss_pred             HHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEe-CCCC---------------C--H----HHHHHHHHhCCcEEE
Q 014492          335 VKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV-TSGM---------------D--A----KKLKDDLAKMGVMIR  391 (423)
Q Consensus       335 ~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~-~~~~---------------~--~----~~l~~~L~~~gI~v~  391 (423)
                      +.++..++.+++.+.|++.+.+.+ .+..-+.+.+++ |++.               +  .    ..+.+.+.+.|....
T Consensus       401 ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~v  480 (522)
T TIGR03799       401 LIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFV  480 (522)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEE
Confidence            888999999999999998876664 344445555554 3211               0  1    345566666676554


Q ss_pred             eCCC-----CCC--CCeEEEEecC-hhhHHHHHHHHh
Q 014492          392 HYNN-----KEL--KGYVRVSVGK-PEHTDALMECLM  420 (423)
Q Consensus       392 ~~~~-----~~~--~~~iRis~~~-~~~~~~l~~al~  420 (423)
                      ....     ..+  .-.+|+++.. ..+.+++...++
T Consensus       481 s~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~  517 (522)
T TIGR03799       481 SRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILD  517 (522)
T ss_pred             EEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHH
Confidence            3221     111  2479999863 223355555554

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.42  E-value=2.9e-10  Score=110.17  Aligned_cols=320  Identities=17%  Similarity=0.172  Sum_probs=196.4

Q ss_pred             CCCCeeEcCCC--CCCCC-CCHHHHHHHhc----CCCCCCC---CCcchHHHHHHHHHHhC-CCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ----LKFPYIY---PDPESRRLRAALAKDSG-LESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~----~~~~~~Y---~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~al~~  161 (423)
                      .++.++|--++  -+..+ ..|++.+|+.+    +.+.+.+   ..| ..+|-+.|++..+ -+-+.|++++|++++++.
T Consensus        42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEt  120 (449)
T COG0161          42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVET  120 (449)
T ss_pred             CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHH
Confidence            35556665443  12222 35788888765    3332222   122 5678888888886 346899999999999999


Q ss_pred             HHHHhc-------CCC-CeEEEcCCCchhhHHHHHHC-C-------------CeEEEecCCC--------CCC----CCH
Q 014492          162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAVN-G-------------AAVVKVPRKS--------DFS----LNV  207 (423)
Q Consensus       162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~v~~~~--------~~~----~d~  207 (423)
                      +++...       +|. .+++.-...|++-...+-.. |             ..+..+|.+.        .+.    -..
T Consensus       121 AlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a  200 (449)
T COG0161         121 ALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAA  200 (449)
T ss_pred             HHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHH
Confidence            988542       232 34888888886322222111 1             1122333211        011    225


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCC-cCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCCchhh--hhccCCcEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNP-DGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI  276 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NP-tG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~~~~~--~~~~~~~~i  276 (423)
                      ++|++.+.+   +++.++|+.....- .|.+++.    +++++||+. |+++|.||+-..|...+....  ..+..+.++
T Consensus       201 ~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~  280 (449)
T COG0161         201 DELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL  280 (449)
T ss_pred             HHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee
Confidence            677777765   56778888755544 8877765    356777877 999999999998876554322  222233333


Q ss_pred             EEccChhhhcccCccccccccCHHHHHHHHHh-c------CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K------QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERL  346 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-~------~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l  346 (423)
                         +++|.+.-.=+.+|.+++.+++.+.+..- .      ..|+.++++.+++.+.|+-   ++++++.++.-....+.|
T Consensus       281 ---~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L  357 (449)
T COG0161         281 ---CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGL  357 (449)
T ss_pred             ---eecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence               35798763337788888899998888764 1      2367889998888877653   445555554444444455


Q ss_pred             HHHHccCCCCeecCCCceEEEEEeCCCCC---------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHH
Q 014492          347 FKLLKDVPFLNPYPSYSNFILCEVTSGMD---------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDA  414 (423)
Q Consensus       347 ~~~L~~~~~~~~~p~~~~~~~~~~~~~~~---------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~  414 (423)
                      .+.|.+.+.+.-...-|.+.-+++....+         ...+.+.+.++|++++|.+     +.+=++.   .+.++.++
T Consensus       358 ~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g-----~~i~~~PPliit~~eid~  432 (449)
T COG0161         358 QAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG-----DVIYLMPPLIITREEIDE  432 (449)
T ss_pred             HHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC-----CEEEEcCCccCCHHHHHH
Confidence            44444444444345677777777753333         4567777889999999985     2344443   25666777


Q ss_pred             HHHHHhh
Q 014492          415 LMECLMH  421 (423)
Q Consensus       415 l~~al~~  421 (423)
                      +.+++++
T Consensus       433 l~~~l~~  439 (449)
T COG0161         433 LVDALRE  439 (449)
T ss_pred             HHHHHHH
Confidence            7666653

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.40  E-value=4.7e-11  Score=118.85  Aligned_cols=308  Identities=15%  Similarity=0.130  Sum_probs=169.2

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCCCCCCCc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +.+++.+||+..+.  ..++ .+|++.+|+.+ +.....+..+  ...++-+.+++.+. ..+.++++++++++++.+++
T Consensus        44 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk  122 (431)
T PRK06209         44 DVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELID-GADMVKFCKNGSDATSAAVR  122 (431)
T ss_pred             eCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-ccceEEEecCHHHHHHHHHH
Confidence            45678899997663  3344 46888888876 3322223222  22356778887764 23689999999999999988


Q ss_pred             HhcC-CC-CeEEEc-CCCchhhHHHHH----H-CCCe------EEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCC
Q 014492          165 CVLD-PG-DKIVDC-PPTFTMYEFDAA----V-NGAA------VVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPN  228 (423)
Q Consensus       165 ~l~~-~g-d~Vl~~-~p~y~~~~~~~~----~-~g~~------~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~  228 (423)
                      .... .| ..|+.. ...|..+.....    . .|..      +..++     .-|++++++.+..  .++.+|++....
T Consensus       123 lAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~aavi~Epv~  197 (431)
T PRK06209        123 LARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPGRIACVILEPAT  197 (431)
T ss_pred             HHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCCCEEEEEEcccc
Confidence            4321 23 445544 233322110000    0 0100      11111     2378999988853  346677765433


Q ss_pred             CCcCcCCC---HHHHHHHHcC-CCEEEEccCCccccCCCchhh-hhccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          229 NPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       229 NPtG~~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                         |...+   .+++.++|+. |+++|+||++..+........ ..+..+.   +.+++|.+| .|+.+|++++++++++
T Consensus       198 ---g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PD---i~t~gK~lg-gG~p~~av~~~~~i~~  270 (431)
T PRK06209        198 ---ADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPD---LSCFGKALG-NGFAVSALAGKREYME  270 (431)
T ss_pred             ---CCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcc---eeeehhhhc-CCcccEEEEEHHHHHh
Confidence               33444   4566666766 999999999976643221111 1222222   356799998 6889999999998887


Q ss_pred             H--HHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492          304 Y--LWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV  370 (423)
Q Consensus       304 ~--l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~  370 (423)
                      .  +..        ....++.++++..++.++|+.   ++..++..+.-+..++.+.+...+++........|..+.+.+
T Consensus       271 ~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~  350 (431)
T PRK06209        271 LGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTY  350 (431)
T ss_pred             hhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEE
Confidence            6  211        122355677777777666643   333444444444445555444444554321121222222221


Q ss_pred             ---C-CCCC----HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          371 ---T-SGMD----AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       371 ---~-~~~~----~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                         . .+..    ...+.+.|.++||++.+         ++|+.. +.++++++.++++
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~  400 (431)
T PRK06209        351 STLDGNGQPSQAFRTLFLQETIRRGVLMPS---------LVVSYAHGDADIERTIDAVH  400 (431)
T ss_pred             ecCCcccCCcHHHHHHHHHHHHHCCccccc---------ccccccCCHHHHHHHHHHHH
Confidence               1 1111    22566778899998632         355432 4445555555554

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.37  E-value=3.5e-10  Score=119.14  Aligned_cols=316  Identities=15%  Similarity=0.185  Sum_probs=188.1

Q ss_pred             CeeEcCCC--CCCCC--CCHHHHHHHhc-CC-CCCC----CCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDAN--ENPYG--PPPEVREALGQ-LK-FPYI----YPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~--~~~~~--~~~~v~~al~~-~~-~~~~----Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~  164 (423)
                      .++|+..+  ...++  .+|++.+|+.+ +. ..+.    |......+|-+.|.+..+-. .+.|++++++++|++.+++
T Consensus       366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK  445 (817)
T PLN02974        366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK  445 (817)
T ss_pred             eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence            57777655  23444  47999988876 22 2121    12222345666666643311 3589999999999999887


Q ss_pred             HhcC---------------------CCCeEEEcCCCchhhHHHHHHCCC----------e-----EEEecCC--------
Q 014492          165 CVLD---------------------PGDKIVDCPPTFTMYEFDAAVNGA----------A-----VVKVPRK--------  200 (423)
Q Consensus       165 ~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~g~----------~-----~~~v~~~--------  200 (423)
                      ...+                     ...+|+....+|++-...+-..+.          .     ...++.+        
T Consensus       446 mA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~  525 (817)
T PLN02974        446 MAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGR  525 (817)
T ss_pred             HHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccccc
Confidence            4421                     124688888888643332222111          0     0111100        


Q ss_pred             ------CCC-----------C-----CC------------HHHHHHHhhc-------CCceEEEEcCC-CCCcCcCCC-H
Q 014492          201 ------SDF-----------S-----LN------------VELIADAVER-------EKPKCIFLTSP-NNPDGSIIN-D  237 (423)
Q Consensus       201 ------~~~-----------~-----~d------------~~~l~~~i~~-------~~~~~i~l~~p-~NPtG~~~~-~  237 (423)
                            ..+           .     +|            .+.+++.+.+       .++.+|++... +.-.|.+.+ .
T Consensus       526 ~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~  605 (817)
T PLN02974        526 WNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDP  605 (817)
T ss_pred             ccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCH
Confidence                  000           0     01            2456666642       46778888753 676788764 4


Q ss_pred             HH---HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHH---
Q 014492          238 ED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---  307 (423)
Q Consensus       238 ~~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~---  307 (423)
                      +-   ++++|+. |+++|.||++..|...+..  ....+..+.++   +++|.++ .| +.+|.+++++++.+.+..   
T Consensus       606 ~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi---~~gKgLt-gG~~Plaa~l~~~~I~~~f~~~~~  681 (817)
T PLN02974        606 LFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIA---CYAKLLT-GGLVPLAATLATEEVFEAFRGPSK  681 (817)
T ss_pred             HHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEE---eeccccc-CCCCccEEEEEcHHHHHhhccccc
Confidence            43   4555665 9999999999988644432  22222333333   3679987 78 699999999999988752   


Q ss_pred             -----hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHH----HHHHHHccCCCCeecCCCceEEEEEeCCCC-
Q 014492          308 -----AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERE----RLFKLLKDVPFLNPYPSYSNFILCEVTSGM-  374 (423)
Q Consensus       308 -----~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~----~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~-  374 (423)
                           ....|+.++++.+++.+.|+-   ++..+...+..++..+    .+.+.|++.+.+.-...-|.++.+++.+.. 
T Consensus       682 ~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~  761 (817)
T PLN02974        682 LDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGS  761 (817)
T ss_pred             cCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCc
Confidence                 223577889998888877753   3333344444444433    343444556655444566788888874311 


Q ss_pred             -------CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          375 -------DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       375 -------~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                             -+..+.+.+. ++||++++.+     +.||+...   .+++.+++.+++.
T Consensus       762 ~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~  813 (817)
T PLN02974        762 GSGYSSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVY  813 (817)
T ss_pred             ccccchHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHH
Confidence                   1346778888 9999999853     67888643   4555566655554

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.31  E-value=2.1e-09  Score=103.89  Aligned_cols=312  Identities=14%  Similarity=0.110  Sum_probs=192.5

Q ss_pred             eeEcCCCCCCC-CCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC-CCCeE
Q 014492           97 IVKIDANENPY-GPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKI  173 (423)
Q Consensus        97 ~i~l~~~~~~~-~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~-~gd~V  173 (423)
                      +|||-+ +... .+.++..++|..-+  ..| .++...+|++.+++++|.+  .+++|..+..+-.++++.+++ +|+.+
T Consensus        43 ~IDLrS-DTgT~apS~~m~aAM~~GD--D~Y~gdpSv~~Lee~vael~G~E--~alpthqGRgaE~Il~~~~~~~~g~e~  117 (467)
T TIGR02617        43 FIDLLT-DSGTGAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLIKKREQEK  117 (467)
T ss_pred             EEECcc-CCCCCCCCHHHHHHHHcCC--cccccCchHHHHHHHHHHHhCCc--eEEECCCCchHHHHHHHhhcccccccc
Confidence            578755 3333 36788888887622  346 6777889999999999964  578887778888889888888 68877


Q ss_pred             EEcCC-------Cc-hhhHHHHHHCCCeEEEecC----------CCCCCCCHHHHHHHhhc---CCceEEEEc-CCCCCc
Q 014492          174 VDCPP-------TF-TMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVER---EKPKCIFLT-SPNNPD  231 (423)
Q Consensus       174 l~~~p-------~y-~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~---~~~~~i~l~-~p~NPt  231 (423)
                      .+..+       .| ......+...|+.++.++.          +..+.+|++++++.|++   .++-.+... ..|.--
T Consensus       118 g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~G  197 (467)
T TIGR02617       118 GLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAG  197 (467)
T ss_pred             cccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCC
Confidence            75443       11 2233456778999887642          12457999999999974   233333332 113235


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCcc----c------cCCCchhhhh----ccCCcEEEEccChhhhccc-Cccc
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTE----F------SGLESRMEWV----KKHDNLIVLRTFSKRAGLA-GLRV  292 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~----~------~~~~~~~~~~----~~~~~~i~i~S~SK~~g~~-G~R~  292 (423)
                      |+++|.+.++++.+.    |+.+++|.+-..    |      .+.+.....+    ..+ -+.+..|+||.+|.| |   
T Consensus       198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~-aDsvt~slsKglgApvG---  273 (467)
T TIGR02617       198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKY-ADMLAMSAKKDAMVPMG---  273 (467)
T ss_pred             CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhcc-CCEEEEEcCCCCCCccc---
Confidence            789999998887764    999999987532    1      1112222211    122 225566899988766 5   


Q ss_pred             cccccCHH----HHHHHHHhcC-------CCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCee
Q 014492          293 GYGAFPLS----IIEYLWRAKQ-------PYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNP  358 (423)
Q Consensus       293 G~i~~~~~----~~~~l~~~~~-------~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  358 (423)
                      |+++++++    +.++.+...-       ..+++.-...|+...|.+   .+|+.....+    .++|.+.|.+.+.-.+
T Consensus       274 g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~q----v~yl~~~L~~~Gvpi~  349 (467)
T TIGR02617       274 GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQ----VQYLVNGLEEIGVVCQ  349 (467)
T ss_pred             ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHH----HHHHHHHHHhCCCcEE
Confidence            66766544    2333332211       124566666666655554   4555555554    4466677776553233


Q ss_pred             cCCCceEEEEEe-------C-CCCCHHHHHHHHH-hCCcEEEe-CCC-----C-------CCCCeEEEEec----ChhhH
Q 014492          359 YPSYSNFILCEV-------T-SGMDAKKLKDDLA-KMGVMIRH-YNN-----K-------ELKGYVRVSVG----KPEHT  412 (423)
Q Consensus       359 ~p~~~~~~~~~~-------~-~~~~~~~l~~~L~-~~gI~v~~-~~~-----~-------~~~~~iRis~~----~~~~~  412 (423)
                      . .+|.-++++.       | ....+..+...|- +.||--.. |+.     +       ..-..+|+++.    +..++
T Consensus       350 ~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~  428 (467)
T TIGR02617       350 Q-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHM  428 (467)
T ss_pred             e-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHH
Confidence            4 5555555532       2 1345778887775 78886542 111     0       11257999975    46678


Q ss_pred             HHHHHHHhhh
Q 014492          413 DALMECLMHL  422 (423)
Q Consensus       413 ~~l~~al~~l  422 (423)
                      |.+.+++..+
T Consensus       429 d~v~~~~~~~  438 (467)
T TIGR02617       429 DFIIEAFKHV  438 (467)
T ss_pred             HHHHHHHHHH
Confidence            8888888765

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.27  E-value=2.7e-10  Score=105.92  Aligned_cols=317  Identities=15%  Similarity=0.104  Sum_probs=200.9

Q ss_pred             CCCeeEcCCC-CCCCCCCHHHHHH----HhcCCCC----CC-CCCcc-hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDAN-ENPYGPPPEVREA----LGQLKFP----YI-YPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~-~~~~~~~~~v~~a----l~~~~~~----~~-Y~~~g-~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ++++++|... --.+.-.+++.+.    +++...+    .+ |++-. ..++++.||+++|+ ++.|+.+.|-+ ++..+
T Consensus        93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-E~aivYs~gF~-ti~S~  170 (467)
T KOG1358|consen   93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-EDAIVYSYGFS-TIESA  170 (467)
T ss_pred             CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-cceeeeccccc-hhhhc
Confidence            5567777553 2334445555543    3343222    22 55543 56899999999996 57888888876 66777


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--------C----ceEEEEcCCCCC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--------K----PKCIFLTSPNNP  230 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--------~----~~~i~l~~p~NP  230 (423)
                      +.+++..||.|.+..-.........+...-.++.+.     ..|.+.+++.+.+.        +    -+.|++..-.-+
T Consensus       171 ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fk-----hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N  245 (467)
T KOG1358|consen  171 IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFK-----HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYAN  245 (467)
T ss_pred             chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEec-----CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccC
Confidence            788999999998887777667776676666777765     33566666655321        1    235666677777


Q ss_pred             cCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCch---h--hhhccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---M--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~---~--~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~  304 (423)
                      ||.+.+..++.++... ...||+||.|+...-+...   .  ...+..+-.++++|+.-+++..|   |+..++.-++ .
T Consensus       246 ~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~-~  321 (467)
T KOG1358|consen  246 TGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIA-D  321 (467)
T ss_pred             CCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecceeeE-e
Confidence            9999999999999987 9999999999865532211   1  11223456789999988887666   8887744333 2


Q ss_pred             HHHhcC-C--C--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC--C--C
Q 014492          305 LWRAKQ-P--Y--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G--M  374 (423)
Q Consensus       305 l~~~~~-~--~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~--~--~  374 (423)
                      ..+... .  |  +.++....++..++.-.+|-.++.+.++.....+-+.|....+..+ ....+..+.+.+.+  +  .
T Consensus       322 hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e  401 (467)
T KOG1358|consen  322 HQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSRE  401 (467)
T ss_pred             eeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchH
Confidence            333322 2  2  4566666777777766666556666666666667777776654443 33455566666642  1  1


Q ss_pred             C----HHHHHHHHHhCCcEEEeCCC------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          375 D----AKKLKDDLAKMGVMIRHYNN------KELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       375 ~----~~~l~~~L~~~gI~v~~~~~------~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      +    -+++.+.+..+|+.+.....      ...+..+||++......+++.++...
T Consensus       402 ~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~  458 (467)
T KOG1358|consen  402 KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL  458 (467)
T ss_pred             HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHH
Confidence            1    24555665545888864322      34566899999754444555555443

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.26  E-value=2.4e-09  Score=100.44  Aligned_cols=277  Identities=19%  Similarity=0.211  Sum_probs=179.9

Q ss_pred             hCCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC-CCCC---CCCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492           90 LGRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK-FPYI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (423)
Q Consensus        90 ~~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~-~~~~---Y~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~  160 (423)
                      ++..+.++||+.++-  ..++ ..|++.+++.+ +. ..+.   |-.-..-++.+.+.+..+- ..+.|++.+++++|++
T Consensus        51 ~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne  130 (433)
T KOG1401|consen   51 FDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANE  130 (433)
T ss_pred             ecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHH
Confidence            445567889987652  2232 36899988876 32 1121   2111134566666666632 5789999999999999


Q ss_pred             HHHHHhcC---CC-----CeEEEcCCCchhhHHHH-HHCCCeEEEecCC---CC----CCCCHHHHHHHhhcCC--ceEE
Q 014492          161 LIMRCVLD---PG-----DKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK---SD----FSLNVELIADAVEREK--PKCI  222 (423)
Q Consensus       161 ~~~~~l~~---~g-----d~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~---~~----~~~d~~~l~~~i~~~~--~~~i  222 (423)
                      .++..-.+   .+     .+|+....+|+.-...+ ...+......|.+   ++    ..-|..++++.++.++  +.+|
T Consensus       131 ~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAV  210 (433)
T KOG1401|consen  131 TALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAV  210 (433)
T ss_pred             HHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEE
Confidence            99874321   11     24888888886433222 2233333333321   11    1236899999987543  7899


Q ss_pred             EEcCCCCCcCcCC-CHHHHH---HHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCcccccc
Q 014492          223 FLTSPNNPDGSII-NDEDLL---KILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (423)
Q Consensus       223 ~l~~p~NPtG~~~-~~~~l~---~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i  295 (423)
                      |+...+---|... +++.+.   .+|+. ++++|.||++-.|...+.  ....+...+.+   .++.|.++ .|+.+|..
T Consensus       211 IvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI---~t~aK~L~-gGlPigA~  286 (433)
T KOG1401|consen  211 IVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDI---TTVAKPLG-GGLPIGAT  286 (433)
T ss_pred             EEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcc---eeehhhcc-CCceeEEE
Confidence            9887777677655 444444   44555 999999999998764332  12223333333   34679988 89999999


Q ss_pred             ccCHHHHHHHHHhcC-----CCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEE
Q 014492          296 AFPLSIIEYLWRAKQ-----PYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFI  366 (423)
Q Consensus       296 ~~~~~~~~~l~~~~~-----~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~  366 (423)
                      +++.++.+.+..-..     .|+.++++..++...++   ++++++++.+.-+..++.+.+.+.+.+.... .-..+.++
T Consensus       287 ~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~i  366 (433)
T KOG1401|consen  287 GVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVI  366 (433)
T ss_pred             eehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEE
Confidence            999999988864332     47788888888887765   5789999999999999999999987653332 24556666


Q ss_pred             EEEe
Q 014492          367 LCEV  370 (423)
Q Consensus       367 ~~~~  370 (423)
                      .+.+
T Consensus       367 g~~~  370 (433)
T KOG1401|consen  367 GFEF  370 (433)
T ss_pred             EEEE
Confidence            5544

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.21  E-value=8.6e-09  Score=93.97  Aligned_cols=258  Identities=14%  Similarity=0.084  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC--CCCeEEEcC-CCch----hhHHHHHHCCCeEEEecCCCCCC
Q 014492          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD--PGDKIVDCP-PTFT----MYEFDAAVNGAAVVKVPRKSDFS  204 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~-p~y~----~~~~~~~~~g~~~~~v~~~~~~~  204 (423)
                      +.+-..++...|..+.+++++.+++-.++.++.+.++  +|+.||+++ -+|+    .....++..|..     .+-...
T Consensus        79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~  153 (407)
T COG3844          79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGV  153 (407)
T ss_pred             hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceee
Confidence            4577888888999999999999999999888887754  477777654 3454    233344444433     122235


Q ss_pred             CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChh
Q 014492          205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK  283 (423)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK  283 (423)
                      ++++++++.+. .++.+|++++.|.-||+.++..++.++++. |++++-|-+|+-...    ...+...+..+-|++--|
T Consensus       154 ~~P~~~~~~~~-dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav----p~~Lh~~gaDfaigcsyK  228 (407)
T COG3844         154 IAPRALEEAIT-DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV----PVDLHAAGADFAIGCSYK  228 (407)
T ss_pred             eChHHHHHhhc-cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc----ceeecccCCCeeeeeece
Confidence            56789999997 789999999999999999999999999997 999999999984432    222334455577777778


Q ss_pred             hhc-ccCccccccccCHHHHHHHHHhcC-------------------------CCCCcHHHHHHHHHHhCCh--HHHHHH
Q 014492          284 RAG-LAGLRVGYGAFPLSIIEYLWRAKQ-------------------------PYNVSVAAEVAACAALQNP--IYLEKV  335 (423)
Q Consensus       284 ~~g-~~G~R~G~i~~~~~~~~~l~~~~~-------------------------~~~~~~~~~~a~~~~l~~~--~~~~~~  335 (423)
                      -++ -||- .+++...++..+.......                         ..+.+.++..+...+|+-.  --+.++
T Consensus       229 YLNgGPGa-pa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~l  307 (407)
T COG3844         229 YLNGGPGA-PAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITEL  307 (407)
T ss_pred             eccCCCCC-ceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHH
Confidence            653 2343 3344443333332221110                         0234556666666666531  116788


Q ss_pred             HHHHHHHHHHHHHHHccC-C--CCe-ecC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492          336 KEALIKERERLFKLLKDV-P--FLN-PYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  407 (423)
Q Consensus       336 ~~~~~~~~~~l~~~L~~~-~--~~~-~~p----~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~  407 (423)
                      +++--...+++++.++.. +  +.. ..|    ..|..+.+..|   ...+++++|.++||..-.-.    ++.+|+.++
T Consensus       308 R~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~rGVigD~R~----P~vlRfgft  380 (407)
T COG3844         308 RKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDRGVIGDFRE----PDVLRFGFT  380 (407)
T ss_pred             HHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC---cHHHHHHHHHHcCccccccC----CCeeeecCc
Confidence            888888888888877652 1  222 233    34667777776   67899999999999865433    678999875

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.20  E-value=1.4e-08  Score=107.36  Aligned_cols=295  Identities=16%  Similarity=0.140  Sum_probs=186.7

Q ss_pred             CCCCCCCCCCHHHHHHHhcCCC-CC---CC-CC--cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc--
Q 014492          101 DANENPYGPPPEVREALGQLKF-PY---IY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL--  167 (423)
Q Consensus       101 ~~~~~~~~~~~~v~~al~~~~~-~~---~Y-~~--~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~--  167 (423)
                      +.|..+.-.|+.+.+.+.+... ..   -| |.  .|    .-+++..++++.|.+..|.-+..+++.+.+.++.+.-  
T Consensus        70 g~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~  149 (939)
T TIGR00461        70 GMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVS  149 (939)
T ss_pred             CCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhh
Confidence            4444445456777756654321 12   23 21  12    2378899999999988888888888888776665532  


Q ss_pred             -CCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          168 -DPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       168 -~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                       +++++|++++-.|+.+....    +..|.+++.++        +++|++.+   ++.++++.+|+. .|.+.+.+++.+
T Consensus       150 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~---~~~~v~~q~Pn~-~G~ied~~~i~~  217 (939)
T TIGR00461       150 KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV---DVFGCLLQYPAT-DGSILDYKQLID  217 (939)
T ss_pred             cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC---CEEEEEEECCCC-CeEEecHHHHHH
Confidence             23478999999998766444    46899988874        34555544   467888889987 899999999988


Q ss_pred             HHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHH-----------
Q 014492          243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLW-----------  306 (423)
Q Consensus       243 i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~-----------  306 (423)
                      +++. |.+++++.-...+..    .....+.+-+|++++- |.||+|    |--.|++.+.+++.+.+-           
T Consensus       218 ~~h~~gal~~~~ad~~al~l----l~~Pge~GaDi~vg~~-q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~  292 (939)
T TIGR00461       218 ALHSHKSLVSVAADLMALTL----LTPPGHYGADIVLGSS-QRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDAL  292 (939)
T ss_pred             HHHHcCCEEEEEechHHhCC----cCCHHHcCCcEEeeCC-CccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCC
Confidence            8887 888888543222221    1112234555776654 446542    444788877776665432           


Q ss_pred             -----------------HhcCCCCC-cH--H-HHH-HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce
Q 014492          307 -----------------RAKQPYNV-SV--A-AEV-AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN  364 (423)
Q Consensus       307 -----------------~~~~~~~~-~~--~-~~~-a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~  364 (423)
                                       +.+...++ ..  + +.. +++..+..++.++++.++...+..++.+.|++.+...+.+  .+
T Consensus       293 G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~f  370 (939)
T TIGR00461       293 GNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TW  370 (939)
T ss_pred             CCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cc
Confidence                             00001111 11  1 111 1122333467788999999999999999999866433333  33


Q ss_pred             E--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492          365 F--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  419 (423)
Q Consensus       365 ~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  419 (423)
                      |  +.++++ ..+++++.+.|.++||.++...    ++.+++|+.   +.++++.|.+++
T Consensus       371 F~~~~v~~~-~~~~~~i~~~~~~~gi~l~~~~----~~~i~~s~~E~~t~~di~~l~~~~  425 (939)
T TIGR00461       371 FDTLTVKVG-NGISSELLKAAEEFNINLRAVD----TTTVGIALDETTTKADVENLLKVF  425 (939)
T ss_pred             cceEEEEeC-CCCHHHHHHHHHHCCCeeeecC----CCEEEEEeecCCCHHHHHHHHHHh
Confidence            4  445553 3568899999999999988743    468999986   455555555555

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.19  E-value=2e-09  Score=98.03  Aligned_cols=317  Identities=16%  Similarity=0.152  Sum_probs=202.5

Q ss_pred             hCCCCCCeeEcCCCC---CCCCCCHHHHHHHhcC-CC---C-C-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           90 LGRKPEDIVKIDANE---NPYGPPPEVREALGQL-KF---P-Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        90 ~~~~~~~~i~l~~~~---~~~~~~~~v~~al~~~-~~---~-~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      |+.++..++||=.+.   |--..+|.+.+++.+. +.   . . .|.+ -..++.+-+.+++|.  +-++.++.+.|+.+
T Consensus        54 wD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd-~~~~f~~~vt~lf~~--~kvlpmnTGaEa~E  130 (427)
T KOG1402|consen   54 WDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYND-VLGEFAEYVTKLFGY--DKVLPMNTGAEAVE  130 (427)
T ss_pred             ECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhh-hHHHHHHHHHHhcCc--ceeeecccchhHHH
Confidence            455677777775553   3345689999999862 21   1 1 1322 245778888888885  56888888899999


Q ss_pred             HHHHHhc------C--CC-C-eEEEcCCCchhhHHHH----------HHCCC----eEEEecCCCCCCCCHHHHHHHhhc
Q 014492          161 LIMRCVL------D--PG-D-KIVDCPPTFTMYEFDA----------AVNGA----AVVKVPRKSDFSLNVELIADAVER  216 (423)
Q Consensus       161 ~~~~~l~------~--~g-d-~Vl~~~p~y~~~~~~~----------~~~g~----~~~~v~~~~~~~~d~~~l~~~i~~  216 (423)
                      .++....      +  |. . .|+.....|++-...+          +.+|-    .+..||     --|.++|+.+++.
T Consensus       131 ta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~-----Y~d~eale~~l~~  205 (427)
T KOG1402|consen  131 TACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVP-----YGDAEALEVALKS  205 (427)
T ss_pred             HHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeec-----cCCHHHHHHHhcC
Confidence            9887331      1  32 2 3443444443211111          11110    011111     1268999999988


Q ss_pred             CCceEEEEcCCCCCcCcCCCHH----HHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccC
Q 014492          217 EKPKCIFLTSPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG  289 (423)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~----~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G  289 (423)
                      .+..++++..-+-.-|++.|.+    ...+||.. ++++|.||++......+..+  ..-...+.+++   |.|+++-.=
T Consensus       206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi---lgKalSGG~  282 (427)
T KOG1402|consen  206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI---LGKALSGGV  282 (427)
T ss_pred             CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE---EeccccCCe
Confidence            8888999888899999988754    45667776 99999999999877544321  11112233333   459886222


Q ss_pred             ccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-----CeecCCC
Q 014492          290 LRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF-----LNPYPSY  362 (423)
Q Consensus       290 ~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-----~~~~p~~  362 (423)
                      +.+..++++++++..+..-.  ..|+-|+++..++.++|+--. -++..++-..+-+.++..|.+++.     +....+.
T Consensus       283 ~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~-eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr  361 (427)
T KOG1402|consen  283 YPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV-EEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR  361 (427)
T ss_pred             eeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccccccchhheeecc
Confidence            56777888888877655432  347889999888888885311 134555556666777777776532     2334677


Q ss_pred             ceEEEEEeC----CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          363 SNFILCEVT----SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~~~~~~~~~----~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.+..+.+.    .+.++-+++-.|.++|++..|..    .+-||++....-..++|.++++.+
T Consensus       362 Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i  421 (427)
T KOG1402|consen  362 GLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAI  421 (427)
T ss_pred             ceEEEEEeccccccchhHHHHHHcccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHH
Confidence            888776663    24667778888889999888765    468999976444447788887765

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=99.14  E-value=5.8e-09  Score=93.91  Aligned_cols=189  Identities=20%  Similarity=0.261  Sum_probs=134.0

Q ss_pred             HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEE-cCC
Q 014492          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVD-CPP  178 (423)
Q Consensus       111 ~~v~~al~~~---------~~~~~Y~~~g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~-~~p  178 (423)
                      ..|++|+++.         ..+++|.|-|.+.|.+-.|+.+|.+..  +..+.+|+ +|+..++..+++|||+.+. .--
T Consensus        38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGT-HAI~~aLfg~LRpgDell~i~G~  116 (416)
T COG4100          38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGT-HAIACALFGILRPGDELLYITGS  116 (416)
T ss_pred             HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeeeecch-hHHHHHHHhccCCCCeEEEecCC
Confidence            4566777652         123556777888999999999997543  44466665 7999999999999999763 223


Q ss_pred             CchhhHH----------HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-
Q 014492          179 TFTMYEF----------DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM-  246 (423)
Q Consensus       179 ~y~~~~~----------~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-  246 (423)
                      -|.....          ..+.+|+....+|+..+..+|.+.++..++ +++|+|-+. +-..-.--.+++++++++.+. 
T Consensus       117 PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~-~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~v  195 (416)
T COG4100         117 PYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS-DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFV  195 (416)
T ss_pred             cchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcC-ccceEEEEEeccCcCCCCcccHHHHHHHHHHH
Confidence            3432222          235578889999988778999999999997 799999986 432222234677888887764 


Q ss_pred             -----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcc--ccccccCHHHHHHHH
Q 014492          247 -----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLW  306 (423)
Q Consensus       247 -----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R--~G~i~~~~~~~~~l~  306 (423)
                           ++++++|.+|.+|.....+..    -+..++.+|+-|.-| .|+-  -||+.+..+++++..
T Consensus       196 k~inpn~ivFVDNCYGEFvE~~EPt~----vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~  257 (416)
T COG4100         196 KEINPNVIVFVDNCYGEFVEEKEPTH----VGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA  257 (416)
T ss_pred             HhcCCCEEEEEeccchhhhhccCccc----cchhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence                 899999999999985433221    233478899999755 3322  379999999988764

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.14  E-value=1.8e-09  Score=105.09  Aligned_cols=237  Identities=17%  Similarity=0.103  Sum_probs=149.1

Q ss_pred             HHHHHHHHHhCCCC-------CcEEEeCCHHHHHHHHHHHhcC--------CC-----C-eEEEcCCCchhhHHHHHHCC
Q 014492          133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNG  191 (423)
Q Consensus       133 ~lr~~ia~~~g~~~-------~~i~~t~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g  191 (423)
                      ++.+.+++.+|.+.       ..-++|+|+++++..++.+..+        .|     . .|++.+-+|......+...|
T Consensus        83 ~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG  162 (373)
T PF00282_consen   83 EVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILG  162 (373)
T ss_dssp             HHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTT
T ss_pred             HHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceee
Confidence            45556666677761       3567999999998766643311        11     2 46667778999999999999


Q ss_pred             CeEEEecCCCCCCCCHHHHHHHhhcC--C---ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCc
Q 014492          192 AAVVKVPRKSDFSLNVELIADAVERE--K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (423)
Q Consensus       192 ~~~~~v~~~~~~~~d~~~l~~~i~~~--~---~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~  264 (423)
                      +.++.||.++++.+|+++|++++.+.  +   +-+|+.+-....||.+=++++|.+|++. ++|+.+|.+|..... .+.
T Consensus       163 lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~  242 (373)
T PF00282_consen  163 LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPE  242 (373)
T ss_dssp             SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT
T ss_pred             eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccc
Confidence            99999999888899999999988531  2   3356667888999999999999999997 999999999987331 111


Q ss_pred             hhhhhcc-CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC-------------------CCCcH-HHHHHH
Q 014492          265 RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP-------------------YNVSV-AAEVAA  322 (423)
Q Consensus       265 ~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~-------------------~~~~~-~~~~a~  322 (423)
                      ....... ....=+..+++|.++ ....+|+++... ..+.........                   ...+. .....+
T Consensus       243 ~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~  321 (373)
T PF00282_consen  243 YRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKL  321 (373)
T ss_dssp             TGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHH
T ss_pred             ccccccccccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHH
Confidence            1111111 111134457899665 667788888754 333322111000                   11222 222333


Q ss_pred             HHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEe
Q 014492          323 CAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEV  370 (423)
Q Consensus       323 ~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~  370 (423)
                      ...++.  .+.+.+..++..++.+++.+.|++.+.+.+ .+..-+.+.+++
T Consensus       322 w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~  372 (373)
T PF00282_consen  322 WATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY  372 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence            333432  355778888888999999999999886664 355556665554

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.13  E-value=2.9e-09  Score=102.70  Aligned_cols=275  Identities=19%  Similarity=0.202  Sum_probs=161.1

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC----CCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQL----KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~----~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      .+++.++|+..+  ...++ .+|++.+++.+.    .+.  ..+..+...+|-+.+.+.++-..+.++++++++++++.+
T Consensus        13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~A   92 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAA   92 (339)
T ss_dssp             TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHH
Confidence            356678999755  34454 358888888762    211  122223345788888888854557999999999999999


Q ss_pred             HHHhc-------C-CCCeEEEcCCCchhhHHHHHH-C------------CCeEEEecCCCCCC-----CCHHHHH---HH
Q 014492          163 MRCVL-------D-PGDKIVDCPPTFTMYEFDAAV-N------------GAAVVKVPRKSDFS-----LNVELIA---DA  213 (423)
Q Consensus       163 ~~~l~-------~-~gd~Vl~~~p~y~~~~~~~~~-~------------g~~~~~v~~~~~~~-----~d~~~l~---~~  213 (423)
                      ++...       . ...+|+....+|+.....+.. .            ...+..+|.++...     -..+.++   ..
T Consensus        93 lkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  172 (339)
T PF00202_consen   93 LKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAA  172 (339)
T ss_dssp             HHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHh
Confidence            98654       1 237899888888743322211 1            12345555322100     0011122   22


Q ss_pred             hhcCCceEEEEcCCCCCcCcCCC-HHH---HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhc
Q 014492          214 VEREKPKCIFLTSPNNPDGSIIN-DED---LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       214 i~~~~~~~i~l~~p~NPtG~~~~-~~~---l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      ...+++.+|++...+...|...+ .+-   +.++|+. |+++|.||++..|...+..  ....+..+.+++   ++|.++
T Consensus       173 ~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~---~gK~l~  249 (339)
T PF00202_consen  173 LNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVT---FGKGLG  249 (339)
T ss_dssp             HHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEE---EEGGGG
T ss_pred             hcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccc---cccchh
Confidence            33357788888866666676554 433   4455555 9999999999988543322  222333344443   469998


Q ss_pred             ccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHc-cCCCCeecC
Q 014492          287 LAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLK-DVPFLNPYP  360 (423)
Q Consensus       287 ~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~p  360 (423)
                       .|+.+|.+++++++.+.+...  ...|..++++..++.+.|+.   ++..+...+.-...++.|. .|. +.+.+.-..
T Consensus       250 -gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~-~l~~~~~~i~~vr  327 (339)
T PF00202_consen  250 -GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLR-ELAARYPLIGEVR  327 (339)
T ss_dssp             -TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH-HHHHHTTTEEEEE
T ss_pred             -hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHH-HHHHhCCCeEEEe
Confidence             779999999999988866432  24467788888888877764   2233333333333333333 222 235444445


Q ss_pred             CCceEEEEEeC
Q 014492          361 SYSNFILCEVT  371 (423)
Q Consensus       361 ~~~~~~~~~~~  371 (423)
                      ..|.++.+++.
T Consensus       328 g~Gl~~~ie~~  338 (339)
T PF00202_consen  328 GIGLMIGIELV  338 (339)
T ss_dssp             EETTEEEEEES
T ss_pred             eeCeEEEEEEE
Confidence            66777777763

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.13  E-value=1.4e-08  Score=93.85  Aligned_cols=310  Identities=18%  Similarity=0.193  Sum_probs=188.2

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cchHHH-----HHHHHHHhCCCCC----cEEEeCCHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQL---KFPYIYPD------PESRRL-----RAALAKDSGLESD----HILVGCGADELI  159 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~------~g~~~l-----r~~ia~~~g~~~~----~i~~t~G~~~al  159 (423)
                      |.|=..||-.  +..|.+|+...   .+.-+||.      ...-+-     ++..-+.|+++|+    +|..-+|+. |.
T Consensus        43 ieLIaSENFt--s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP-AN  119 (477)
T KOG2467|consen   43 IELIASENFT--SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP-AN  119 (477)
T ss_pred             eeEeecccch--HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc-hh
Confidence            6666666643  46788888752   23334432      222122     2222244677775    777777775 66


Q ss_pred             HHHHHHhcCCCCeEEE---cCCCchh--hHHHHHHCCCeEEEe---c--CC-CCCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492          160 DLIMRCVLDPGDKIVD---CPPTFTM--YEFDAAVNGAAVVKV---P--RK-SDFSLNVELIADAVEREKPKCIFLTSPN  228 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~---~~p~y~~--~~~~~~~~g~~~~~v---~--~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (423)
                      ..+..+++.|++.|.-   ++-.|-.  |....+.-.+.-+.+   |  .+ ..+-+|.|.|++....-+||+|+.-.-.
T Consensus       120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~Sa  199 (477)
T KOG2467|consen  120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSA  199 (477)
T ss_pred             hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecccc
Confidence            6788889999999873   3444422  221112111222222   1  22 4567899999998777899988853322


Q ss_pred             CCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHH--
Q 014492          229 NPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--  301 (423)
Q Consensus       229 NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~--  301 (423)
                        --+.++-.++++||+. |.+++.|-+|.... ..   +++...+     .|+..|.+|+  +.|-|-|.|...+.+  
T Consensus       200 --Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~-----DiVTTTTHKs--LRGPRg~mIFyRkGvk~  270 (477)
T KOG2467|consen  200 --YSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC-----DIVTTTTHKS--LRGPRGAMIFYRKGVKS  270 (477)
T ss_pred             --chhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc-----ceeecccccc--ccCCcceeEEEeccCCc
Confidence              3467888999999998 99999999996432 21   2233222     3778888996  479899988864321  


Q ss_pred             -------------HHHHHHhcCC---CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492          302 -------------IEYLWRAKQP---YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY  362 (423)
Q Consensus       302 -------------~~~l~~~~~~---~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~  362 (423)
                                   -+++.....+   .++......++..+|.+   ++ +.+..+++..|.+.|.+.|.+.+.--+..+.
T Consensus       271 ~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpe-fk~Yq~qV~~Nakala~~l~~~Gy~lvtgGT  349 (477)
T KOG2467|consen  271 IKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPE-FKEYQKQVLKNAKALASALISRGYKLVTGGT  349 (477)
T ss_pred             CCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHH-HHHHHHHHHHHHHHHHHHHHHcCceEecCCc
Confidence                         1222221112   23444445555556654   34 5677888889999999999988765454444


Q ss_pred             ce-EEEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHh
Q 014492          363 SN-FILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLM  420 (423)
Q Consensus       363 ~~-~~~~~~~-~~~~~~~l~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~  420 (423)
                      .+ .+++++. .|.|...+-..|..-+|.+.    ||+. .-.++.|||...       .++|.+++.+.|.
T Consensus       350 DnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~  421 (477)
T KOG2467|consen  350 DNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFID  421 (477)
T ss_pred             cceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHH
Confidence            44 4567774 47776666555555677664    4443 345789999742       3555666665554

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.97  E-value=1.6e-07  Score=89.00  Aligned_cols=282  Identities=16%  Similarity=0.163  Sum_probs=165.1

Q ss_pred             HHHHHHHHHhCCCCCcEEEeCCHHHHHH--HHHHHh-cCCC----CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCC
Q 014492          133 RLRAALAKDSGLESDHILVGCGADELID--LIMRCV-LDPG----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL  205 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~--~~~~~l-~~~g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  205 (423)
                      +|++.+++..|.+.=.+..-+|++.=+.  ++++.. -..|    +.+|+++..|......+.+.|.+|+.|+.++++.+
T Consensus       113 ~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~V  192 (496)
T COG1003         113 ELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNV  192 (496)
T ss_pred             HHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCc
Confidence            4444444555765444445556554332  223333 2223    67999999999888888899999999999888999


Q ss_pred             CHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      |+++|++++. +++.++.|++||. .|..  .+.|.+||+.    |..|..|.+-..-..+-..   .++.+..|+=--+
T Consensus       193 DlddLk~k~~-~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r---PGd~G~DV~HlNL  265 (496)
T COG1003         193 DLDDLRAKAE-DNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGLAR---PGDMGFDVVHLNL  265 (496)
T ss_pred             cHHHHHHHhc-cceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhcccc---ccccccceEEeec
Confidence            9999999997 7999999999986 5654  4556666654    9999999986532211110   1122223444457


Q ss_pred             hhhhccc----CccccccccCHHHHHHHHH----------------------hcCCCCCcHHHHHHHHHHhC--ChHHHH
Q 014492          282 SKRAGLA----GLRVGYGAFPLSIIEYLWR----------------------AKQPYNVSVAAEVAACAALQ--NPIYLE  333 (423)
Q Consensus       282 SK~~g~~----G~R~G~i~~~~~~~~~l~~----------------------~~~~~~~~~~~~~a~~~~l~--~~~~~~  333 (423)
                      +|.|+.|    |-..|=+.....+...+-.                      ...+|+--.+ ...+..++.  ..+.++
T Consensus       266 HKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i-l~~a~~YI~~mG~~GL~  344 (496)
T COG1003         266 HKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI-LPIAWAYIRMMGADGLK  344 (496)
T ss_pred             ccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchH-HHHHHHHHHHHhHHHHH
Confidence            8887654    3334544443333322211                      0111211111 222222222  245566


Q ss_pred             HHHHHHHHHHHHHHHHHccCCCCeecCCC--ceEEEEEeC-----CCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE
Q 014492          334 KVKEALIKERERLFKLLKDVPFLNPYPSY--SNFILCEVT-----SGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS  405 (423)
Q Consensus       334 ~~~~~~~~~~~~l~~~L~~~~~~~~~p~~--~~~~~~~~~-----~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis  405 (423)
                      +.-+.---+.+++.+.|+..=-+...+..  ..=+.++..     .|++..+++++|.++|+.-.....+ -..+.+=|=
T Consensus       345 ~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIE  424 (496)
T COG1003         345 QASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIE  424 (496)
T ss_pred             HHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeec
Confidence            66666667889999999863111111221  111222222     2789999999999999766544432 246777776


Q ss_pred             ecC---hhhHHHHHHHHhhh
Q 014492          406 VGK---PEHTDALMECLMHL  422 (423)
Q Consensus       406 ~~~---~~~~~~l~~al~~l  422 (423)
                      .+.   .++.|++.+++..|
T Consensus       425 PTEsEsk~eLDrf~dami~I  444 (496)
T COG1003         425 PTESESKEELDRFIDAMIAI  444 (496)
T ss_pred             CCCCCCHHHHHHHHHHHHHH
Confidence            664   34455566655544

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=98.95  E-value=2.9e-09  Score=89.68  Aligned_cols=85  Identities=25%  Similarity=0.504  Sum_probs=65.6

Q ss_pred             CCCeeEcCCCCCC-----------------CCCCHHHHHHHhcCCCCCCCCC-cchHHHHHHHHHHh----C----CCCC
Q 014492           94 PEDIVKIDANENP-----------------YGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G----LESD  147 (423)
Q Consensus        94 ~~~~i~l~~~~~~-----------------~~~~~~v~~al~~~~~~~~Y~~-~g~~~lr~~ia~~~----g----~~~~  147 (423)
                      +..+|+|+.+||.                 +.+++.+.+++.+.   ..|++ .|..+||+++++|+    |    ++++
T Consensus        42 p~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd  118 (153)
T PLN02994         42 PQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---ALFQDYHGLANFRKAIANFMAEARGGRVKFDAD  118 (153)
T ss_pred             CCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchh
Confidence            4456777777663                 33334445555442   23644 47899999999986    4    4688


Q ss_pred             cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      +|++|+|+++++..++.++++|||.|++++|+|+
T Consensus       119 ~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~  152 (153)
T PLN02994        119 MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA  152 (153)
T ss_pred             heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence            9999999999999999999999999999999996

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.95  E-value=4.8e-08  Score=94.96  Aligned_cols=267  Identities=16%  Similarity=0.164  Sum_probs=146.7

Q ss_pred             HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh---cCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCCCCCC
Q 014492          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSL  205 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~  205 (423)
                      ++...+++..|.+.-+.-+-.|++.+-+.++.+.   -+.+++|+++.-.|+.+....+    ..|.+++.++.+++...
T Consensus       114 e~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~  193 (429)
T PF02347_consen  114 EYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTT  193 (429)
T ss_dssp             HHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB
T ss_pred             HHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCc
Confidence            7889999999987655566667766655554433   2334689999999987776443    47999999997665555


Q ss_pred             CHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492          206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~  284 (423)
                      |         .+++.+|++.+||. .|.+-+.+++.++++. |.++++ .+.- ..-  ..+......+.+|++++ +|.
T Consensus       194 d---------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~-~aL--~~l~~Pge~GADI~vg~-~Q~  258 (429)
T PF02347_consen  194 D---------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADP-NAL--GGLKSPGEYGADIVVGE-HQT  258 (429)
T ss_dssp             ----------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGC-CGC--CTC--GGGGT-SEEEEC-CTT
T ss_pred             c---------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCH-HHH--hCcCChhhcCccEEeeC-CCC
Confidence            5         47899999999997 8999999999999986 887776 3321 111  11122223444567776 677


Q ss_pred             hccc----CccccccccCHHHHHHHH----------------------------HhcCCC--CCc-HH-HHH-HHHHHhC
Q 014492          285 AGLA----GLRVGYGAFPLSIIEYLW----------------------------RAKQPY--NVS-VA-AEV-AACAALQ  327 (423)
Q Consensus       285 ~g~~----G~R~G~i~~~~~~~~~l~----------------------------~~~~~~--~~~-~~-~~~-a~~~~l~  327 (423)
                      ||.|    |--.|++.+.+++++.+-                            +-+...  +.+ .+ +.. +++.++.
T Consensus       259 fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~  338 (429)
T PF02347_consen  259 FGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL  338 (429)
T ss_dssp             TT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH
T ss_pred             CcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh
Confidence            7654    455788887777665432                            212121  112 22 222 2223333


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS  405 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis  405 (423)
                      .++.+++..++...+..++.+.|+++. ........+|  +....+ .....++.++....|+....    ...+++-|+
T Consensus       339 G~~GL~~iA~~~~~~A~yl~~~L~~~~-~~~~~~~~f~e~v~~~~~-~~~~~~l~~~~~~~gl~~~~----~~~~~~li~  412 (429)
T PF02347_consen  339 GPEGLREIAERIHLNAHYLAERLKKIY-GLPFDNPFFFEFVVVFSK-DKEVEELLKRGIEGGLNLRY----PDDGALLIC  412 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCTT-BECSSSSSBSSEEEEESS--HHHHHHHHTT----EEEGG----G-SSEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCceeeeeecCC-cHHHHHHHHHHHhcCCCccc----cCCCeEEEE
Confidence            467899999999999999999999972 2223333333  333332 21222334444445533322    224588888


Q ss_pred             ecChhhHHHHHHHHh
Q 014492          406 VGKPEHTDALMECLM  420 (423)
Q Consensus       406 ~~~~~~~~~l~~al~  420 (423)
                      ++...+.++++..++
T Consensus       413 ~TE~~t~edid~lv~  427 (429)
T PF02347_consen  413 VTETRTKEDIDRLVE  427 (429)
T ss_dssp             --TT--HHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHh
Confidence            875444455555544

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.92  E-value=2.1e-07  Score=88.56  Aligned_cols=212  Identities=18%  Similarity=0.112  Sum_probs=144.1

Q ss_pred             CHHHHHHHhcC-CC---CCCCCCcc--hHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCeEE-----EcC
Q 014492          110 PPEVREALGQL-KF---PYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV-----DCP  177 (423)
Q Consensus       110 ~~~v~~al~~~-~~---~~~Y~~~g--~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~gd~Vl-----~~~  177 (423)
                      .+++++++... ..   ...|-..+  ..++......+.++. .+.++++|..+.++..++.++.+++..|+     ++ 
T Consensus        40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-  118 (395)
T COG1921          40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-  118 (395)
T ss_pred             CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-
Confidence            47777777652 11   11222222  234554444445653 57889999999999999998887555554     23 


Q ss_pred             CCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492          178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       178 p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea  255 (423)
                      +..+......+..|++++.+-..  ..-...+++.+|. +++++++=. ++|-+-=-.++.+++.+|++. |+++++|.+
T Consensus       119 gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-e~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~a  195 (395)
T COG1921         119 GGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-ENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLA  195 (395)
T ss_pred             CCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-cCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecC
Confidence            56678899999999999999842  2467899999997 677766654 444333345788999999997 999999998


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhC
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ  327 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~  327 (423)
                      -.............-..+..+++.|..|.+|  |.+.|.+++.+++++++.+..  +.+.+.....++..++|+
T Consensus       196 Sg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe  267 (395)
T COG1921         196 SGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALE  267 (395)
T ss_pred             CccccccccchhHHHhcCCCEEEEecchhcC--CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence            7655432222222223455688899999765  888999999999999887653  334555555555555554

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=98.91  E-value=5.1e-08  Score=87.87  Aligned_cols=323  Identities=15%  Similarity=0.124  Sum_probs=183.2

Q ss_pred             CCCCCCeeEcCCCCCCC-CCCHHHHHHHhc-CC---CCCCCCCcchHHHHHHHHHHhCC--CCCcEEEeCCHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANENPY-GPPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIM  163 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~~-~~~~~v~~al~~-~~---~~~~Y~~~g~~~lr~~ia~~~g~--~~~~i~~t~G~~~al~~~~  163 (423)
                      +.++..++|.-+|.... ..+|+|.+|... +.   ...++-.   .+|.+-.......  +-+-++++|+++|+.++++
T Consensus        43 DE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RFlh---d~lv~cA~~l~stlPeLsvc~F~NSGSEANDLAL  119 (452)
T KOG1403|consen   43 DEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRFLH---DELVQCARTLTSTLPELSVCFFVNSGSEANDLAL  119 (452)
T ss_pred             ccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchhhH---HHHHHHHHHHhhcCCCceEEEEecCCchhhHHHH
Confidence            34455666665554444 357888877654 32   2233321   2233322222221  1357889999999999998


Q ss_pred             HHh---cCCCCeEEEcCCCchhhHHH-H-----HH-CCC-----eEEEe-cCCCCC------------C---CCHHHHHH
Q 014492          164 RCV---LDPGDKIVDCPPTFTMYEFD-A-----AV-NGA-----AVVKV-PRKSDF------------S---LNVELIAD  212 (423)
Q Consensus       164 ~~l---~~~gd~Vl~~~p~y~~~~~~-~-----~~-~g~-----~~~~v-~~~~~~------------~---~d~~~l~~  212 (423)
                      +..   .+..| ||+.+..|...... .     +. .|.     ..+.| |.++-+            .   .-.+.+++
T Consensus       120 RLAR~ftkhqD-vItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~  198 (452)
T KOG1403|consen  120 RLARNFTKHQD-VITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKE  198 (452)
T ss_pred             HHHHhhcccCc-eEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHH
Confidence            843   33445 55556666432211 0     11 111     12222 211100            0   11233444


Q ss_pred             Hhhc-----CCceEEEEcCCCCCcCcCCCHH-HHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccCh
Q 014492          213 AVER-----EKPKCIFLTSPNNPDGSIINDE-DLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (423)
Q Consensus       213 ~i~~-----~~~~~i~l~~p~NPtG~~~~~~-~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (423)
                      .+.+     .++.+.+-.+-++--|.++|+. -.+++++.    |.+.|.||++..|..-++.......++-+--+-++.
T Consensus       199 I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmg  278 (452)
T KOG1403|consen  199 ICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMG  278 (452)
T ss_pred             HHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheec
Confidence            4432     2344555567788888888765 46677664    889999999999987666665555555444566788


Q ss_pred             hhhcccCccccccccCHHHHHHHHHhc----CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----C
Q 014492          283 KRAGLAGLRVGYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----P  354 (423)
Q Consensus       283 K~~g~~G~R~G~i~~~~~~~~~l~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~  354 (423)
                      |.+| .|..++.++..+++.+.+....    ..|+.|+.+.++..+.++.-+ -+.++.+-++.-++|...|+++    .
T Consensus       279 KpmG-NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e-~E~Lq~ha~~vG~~L~~lL~~~k~kh~  356 (452)
T KOG1403|consen  279 KPMG-NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCE-DENLQEHAQQVGEKLEVLLRRLKQKHE  356 (452)
T ss_pred             ccCC-CCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            9998 9999999999999999887533    236778888888877776311 1233333334444444444432    2


Q ss_pred             CCeecCCCceEEEEEeCC--------CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          355 FLNPYPSYSNFILCEVTS--------GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       355 ~~~~~p~~~~~~~~~~~~--------~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .+--..+.|.|+-+++-+        ...+..+..+|+ .++|++..-++  ..+-+.|-..   .+++.+++..++++
T Consensus       357 ~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~  433 (452)
T KOG1403|consen  357 CIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDE  433 (452)
T ss_pred             ceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHH
Confidence            121235678898888742        223455667777 57899876442  2345555421   23334555555544

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.85  E-value=6.7e-06  Score=78.26  Aligned_cols=301  Identities=17%  Similarity=0.146  Sum_probs=185.1

Q ss_pred             cCCCCCCCCCCHHHHHHHhcC-CCCCCC-C---Cc--c----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh--
Q 014492          100 IDANENPYGPPPEVREALGQL-KFPYIY-P---DP--E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV--  166 (423)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~-~~~~~Y-~---~~--g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l--  166 (423)
                      ++.|..+.-.|+.|.+.+.+- .....| |   .-  |    .-++...++++.|.+-.|--+--+++.+-+.++.+.  
T Consensus        80 iG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~  159 (450)
T COG0403          80 IGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRV  159 (450)
T ss_pred             ccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHh
Confidence            345555555566666455542 222334 2   11  2    226778888898987666666666665555554443  


Q ss_pred             -cCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC-cCCCHHHH
Q 014492          167 -LDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDEDL  240 (423)
Q Consensus       167 -~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG-~~~~~~~l  240 (423)
                       -.+..+++++.-+|+.+....+-    .|.+++.++.+     |++++++. ...++-++++.+|+. .| ...+..++
T Consensus       160 ~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~~~~~gv~vQyP~~-~G~~~~d~~~l  232 (450)
T COG0403         160 TKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DDGDVFGVLVQYPNT-FGIVEEDLRAL  232 (450)
T ss_pred             hcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cccCeEEEEEecCCC-CCccchhHHHH
Confidence             22357899999999877766554    57788887753     77888888 546889999999985 77 55568888


Q ss_pred             HHHHcC-CCEEEE--ccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHH--------
Q 014492          241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYL--------  305 (423)
Q Consensus       241 ~~i~~~-~~~li~--Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l--------  305 (423)
                      .++++. +.++++  |-.-.      ..+......+.+|++++..- ||+|    |--+||..+.+++.+++        
T Consensus       233 ~~~~h~~~al~~v~aDplaL------~LL~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S  305 (450)
T COG0403         233 IEAAHSAGALVIVAADPLAL------GLLKPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVS  305 (450)
T ss_pred             HHHHhhcCCEEEEEechhHh------hccCCccccCCceEEecCcc-cCCCcCCCCcceeeeeEhHhHhhcCCCceeeee
Confidence            888886 665553  21111      11222234566788888765 4543    56678888777776532        


Q ss_pred             --------------------HHhcCCCCCcH----HH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC-CCeec
Q 014492          306 --------------------WRAKQPYNVSV----AA-EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP-FLNPY  359 (423)
Q Consensus       306 --------------------~~~~~~~~~~~----~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~  359 (423)
                                          ++-+...++-+    .+ .+++...+..++.+.++..+..+...++.+.|++++ ++.+.
T Consensus       306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~  385 (450)
T COG0403         306 VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV  385 (450)
T ss_pred             ecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec
Confidence                                12222222211    11 222233344467899999999999999999999765 23444


Q ss_pred             CCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          360 PSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       360 p~~~~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      .+ .+|  +.++++. .....+.++....|+.++...    .+.+=|++.   +.++++.|.+++.
T Consensus       386 ~~-~fFdt~~v~~~~-~~~~~l~~~~~~~G~~L~~~~----~~~~~ia~tEt~t~~~i~~l~~~~~  445 (450)
T COG0403         386 FD-HFFDTFTVRVPE-EVAEALLAAAIAGGINLRRVD----ADTVLIALTETTTKEDIDALVAAFG  445 (450)
T ss_pred             cc-cceeeEEEecch-hHHHHHHHHHHhcCCceeeec----CCceEEEeecccCHHHHHHHHHHHh
Confidence            33 555  4456642 345566666667888888765    235666664   4555666666554

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=98.85  E-value=9e-07  Score=90.62  Aligned_cols=197  Identities=16%  Similarity=0.148  Sum_probs=125.7

Q ss_pred             eEEEcCCCchhhHHHHHHCCC---eEEEecCCCCCCCCHHHHHHHhhc---C--CceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          172 KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~---~--~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      .++++.-.|.++...+...|+   .++.||.++++.+|+++|++.+.+   .  .+-+|+.+-....+|.+=|+++|.+|
T Consensus       224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l  303 (608)
T TIGR03811       224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL  303 (608)
T ss_pred             EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence            477777789999999999998   589999988899999999998853   2  23456667888999999999999999


Q ss_pred             Hc---C-CC--EEEEccCCcccc---CCC------------------------------chhhhhc-cCCcEEEEccChh
Q 014492          244 LE---M-PI--LVVLDEAYTEFS---GLE------------------------------SRMEWVK-KHDNLIVLRTFSK  283 (423)
Q Consensus       244 ~~---~-~~--~li~Deay~~~~---~~~------------------------------~~~~~~~-~~~~~i~i~S~SK  283 (423)
                      ++   . |+  ++.+|.||+.+.   ...                              .....+. .....=+.-.++|
T Consensus       304 ~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK  383 (608)
T TIGR03811       304 RNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHK  383 (608)
T ss_pred             HHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCccc
Confidence            84   2 65  799999999753   100                              0000111 1122334557899


Q ss_pred             hhcccCccccccccCH-HHHHHHHHhcCCC-----------------CCcHHH--HHHHHHHhC----ChHHHHHHHHHH
Q 014492          284 RAGLAGLRVGYGAFPL-SIIEYLWRAKQPY-----------------NVSVAA--EVAACAALQ----NPIYLEKVKEAL  339 (423)
Q Consensus       284 ~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~-----------------~~~~~~--~~a~~~~l~----~~~~~~~~~~~~  339 (423)
                      . |.....+|.++... .+.+.+. ...+|                 ..+.+.  ..++...++    ..+.+.++.++.
T Consensus       384 ~-g~~Py~~G~ll~Rd~~~~~~~~-~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~  461 (608)
T TIGR03811       384 M-GYIPYSAGGIVIQDIRMRDVIS-YFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGAS  461 (608)
T ss_pred             c-cccCCCeEEEEEeCHHHHHHHh-cCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            5 45677788777754 4333221 11110                 112121  222223322    234577788888


Q ss_pred             HHHHHHHHHHHccCC------CCe---ecCCCceEEEEEe
Q 014492          340 IKERERLFKLLKDVP------FLN---PYPSYSNFILCEV  370 (423)
Q Consensus       340 ~~~~~~l~~~L~~~~------~~~---~~p~~~~~~~~~~  370 (423)
                      .+.++++.+.|.+.+      .+.   +.++.-+.+.+++
T Consensus       462 i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~  501 (608)
T TIGR03811       462 IEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVF  501 (608)
T ss_pred             HHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEE
Confidence            888999999887742      122   2345556565554

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.73  E-value=3.6e-06  Score=80.74  Aligned_cols=259  Identities=18%  Similarity=0.160  Sum_probs=166.8

Q ss_pred             HHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHh---c-C-CC---CeEEEcCCCchhhHHHHHHCCCeEEEecCC-CC
Q 014492          133 RLRAALAKDSGLESD-HILVGCGADELIDLIMRCV---L-D-PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD  202 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l---~-~-~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~  202 (423)
                      ++-..++.+++-+++ .=..|.|+++++.+.....   . . .|   ..++.+.-.+..+...++.++.++..||.+ .+
T Consensus       124 ~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~  203 (491)
T KOG1383|consen  124 ECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGD  203 (491)
T ss_pred             HHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccc
Confidence            455556666765444 2246788888854443322   1 1 23   467778888889999999999999999976 67


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCccccCC--Cchhhhhc-cCCcEE-
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGL--ESRMEWVK-KHDNLI-  276 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~~~~~~--~~~~~~~~-~~~~~i-  276 (423)
                      +.+|+.++.+.++ +++.+++..-|+.|+|..=+.+++.++.-.  ++.+.+|.+-+.|.-.  .......+ ..+.+- 
T Consensus       204 ~~~D~~k~~~~i~-eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~S  282 (491)
T KOG1383|consen  204 YRVDPGKVVRMID-ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTS  282 (491)
T ss_pred             eEecHHHHHHHhc-cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCcee
Confidence            8999999999997 789999999999999999999999887654  9999999998877641  11110111 111122 


Q ss_pred             EEccChhhhcccCccccccccC-HHHHH-HHH-------HhcCCCC-------CcHHHHHHHHHHhCChHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAFP-LSIIE-YLW-------RAKQPYN-------VSVAAEVAACAALQNPIYLEKVKEALI  340 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~~-~~~~~-~l~-------~~~~~~~-------~~~~~~~a~~~~l~~~~~~~~~~~~~~  340 (423)
                      +-.+-+| ||+.--.+||++-. +++.. ++.       -....++       ....+|.++.--+..+. ..+..+.+.
T Consensus       283 isa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eG-Y~~~~~~iv  360 (491)
T KOG1383|consen  283 ISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEG-YRENTQNIV  360 (491)
T ss_pred             Eeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHH-HHHHHHHHH
Confidence            2223457 66655557887753 33221 111       0001111       12234444444443344 455556678


Q ss_pred             HHHHHHHHHHccCCCCeecC-CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC
Q 014492          341 KERERLFKLLKDVPFLNPYP-SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN  395 (423)
Q Consensus       341 ~~~~~l~~~L~~~~~~~~~p-~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~  395 (423)
                      +....+.+.+++++++.+.. +.-.|+.+.-. ..+--++.+.|.+.|..+.....
T Consensus       361 e~~~~l~egie~i~~i~i~gkp~vs~~~~~s~-~~~i~elsd~l~~~GW~lnalq~  415 (491)
T KOG1383|consen  361 ETARKLREGIENIKGIKIVGKPLVSFILFGSN-DVNIFELSDLLRKKGWILNALQF  415 (491)
T ss_pred             HHHHHHHHhhhccccceecCCCcEEEEEccCC-ccchhhhhHHHHhcCcCccccCC
Confidence            88999999999998887643 33333333322 45667888999999998876654

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.61  E-value=1.8e-05  Score=73.53  Aligned_cols=289  Identities=17%  Similarity=0.180  Sum_probs=176.9

Q ss_pred             CC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC-----CeEEEcCCCch-hhHHHHHHCCCeEEEe
Q 014492          125 IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-----DKIVDCPPTFT-MYEFDAAVNGAAVVKV  197 (423)
Q Consensus       125 ~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g-----d~Vl~~~p~y~-~~~~~~~~~g~~~~~v  197 (423)
                      .| ++.+...|.+++.+.+|.  +.++.|.-+..|=++++..++++|     .+.++++..|. ......+..|+.++.+
T Consensus        74 AYagsrs~~~L~~avkdifGf--q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~  151 (471)
T COG3033          74 AYAGSRSYYALADAVKDIFGF--QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNV  151 (471)
T ss_pred             hhcccccHHHHHHHHHHhcCc--eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccc
Confidence            46 556788999999999996  677888877777777777666554     44445555554 4445556688888777


Q ss_pred             cCCC----------CCCCCHHHHHHHhhc---CCceEEEEc-CCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCCc-c
Q 014492          198 PRKS----------DFSLNVELIADAVER---EKPKCIFLT-SPNNPDGSIINDEDLLKILE---M-PILVVLDEAYT-E  258 (423)
Q Consensus       198 ~~~~----------~~~~d~~~l~~~i~~---~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay~-~  258 (423)
                      +.++          .+.+|++.|++.|++   +++-.|+++ ..|.-.|+..|.+.+++..+   . ++.++.|.+-. +
T Consensus       152 ~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaE  231 (471)
T COG3033         152 YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAE  231 (471)
T ss_pred             cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhh
Confidence            7432          246899999999975   346667766 66777889988887776554   4 99999998742 1


Q ss_pred             ---cc------CCCchhhhhc----cCCcEEEEccChhhhcccCccccccccCHH----HHHHHHHhcC-------CCCC
Q 014492          259 ---FS------GLESRMEWVK----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS----IIEYLWRAKQ-------PYNV  314 (423)
Q Consensus       259 ---~~------~~~~~~~~~~----~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~----~~~~l~~~~~-------~~~~  314 (423)
                         |.      +..-.+..+.    .+..-+ .-|.-|. |+..+ -|++....+    +-..++...-       ..++
T Consensus       232 NaYFIk~rE~gYrd~sI~~IarEm~sYaD~~-~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl  308 (471)
T COG3033         232 NAYFIKQREPGYRDWSIEEIAREMYSYADGC-TMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGL  308 (471)
T ss_pred             hhhhhhhcCcccccccHHHHHHHHHhhhhhh-eeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcc
Confidence               11      1111111110    122222 2344453 33221 166666543    3344333221       1245


Q ss_pred             cHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC--------CCCCHHHHHHHH
Q 014492          315 SVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT--------SGMDAKKLKDDL  383 (423)
Q Consensus       315 ~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~--------~~~~~~~l~~~L  383 (423)
                      +.-...+....|.+   .+|+..+..+.    ++|.+.|++.+--.+.|.+|.-++++..        +...++.|...|
T Consensus       309 ~GrdmealAvGL~e~~~~~yl~~Rv~Qv----~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~el  384 (471)
T COG3033         309 AGRDMEALAVGLREGVNFDYLAHRVAQV----QYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACEL  384 (471)
T ss_pred             cchhHHHHHHHHHHhcCcHHHHHHHHHH----HHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHH
Confidence            55555555555554   46776666554    5677888887643456777776776542        134577787777


Q ss_pred             H-hCCcEEEeCCC-------C------CCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492          384 A-KMGVMIRHYNN-------K------ELKGYVRVSVG----KPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~-~~gI~v~~~~~-------~------~~~~~iRis~~----~~~~~~~l~~al~~l  422 (423)
                      - +.||-...-+.       .      ..-..+|+++.    +.+++|.+.++++++
T Consensus       385 y~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l  441 (471)
T COG3033         385 YKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKAL  441 (471)
T ss_pred             HHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHH
Confidence            5 88987763221       1      11247999975    466788899988876

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.49  E-value=3.3e-05  Score=73.34  Aligned_cols=289  Identities=17%  Similarity=0.136  Sum_probs=175.0

Q ss_pred             HHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhc--CC-----C-----CeEE-EcCCCchhhHHHHHHCC---CeE
Q 014492          133 RLRAALAKDSGLES--DHILVGCGADELIDLIMRCVL--DP-----G-----DKIV-DCPPTFTMYEFDAAVNG---AAV  194 (423)
Q Consensus       133 ~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~--~~-----g-----d~Vl-~~~p~y~~~~~~~~~~g---~~~  194 (423)
                      ++-..+.+..|.+.  +.|+--.|+.+.+..+..+--  -|     |     +-|+ +..-+|.+....+..+|   -.+
T Consensus       145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c  224 (510)
T KOG0629|consen  145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC  224 (510)
T ss_pred             HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence            44455555567655  455444444444444332211  11     2     2343 55667888888998888   578


Q ss_pred             EEecCCCCCCCCHHHHHHHhhcCC-----ceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCC-chhh
Q 014492          195 VKVPRKSDFSLNVELIADAVEREK-----PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE-SRME  267 (423)
Q Consensus       195 ~~v~~~~~~~~d~~~l~~~i~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~-~~~~  267 (423)
                      +.|+.++.+.+++++||+.|.+.+     |-.|-.+.-...-|..-|++.+.++|+. ++|+.+|.+|.....-. ....
T Consensus       225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~  304 (510)
T KOG0629|consen  225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH  304 (510)
T ss_pred             EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence            999988888999999999885432     3333344567888999999999999998 99999999998633211 1111


Q ss_pred             hh-ccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHhcC--------CCCCcH-----HHHHH-------HHHH
Q 014492          268 WV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQ--------PYNVSV-----AAEVA-------ACAA  325 (423)
Q Consensus       268 ~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~--------~~~~~~-----~~~~a-------~~~~  325 (423)
                      .+ .....--+..+.+|..| +.+.++..+...+ ++++......        .|.+|.     ..|..       ..-.
T Consensus       305 kl~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlm  383 (510)
T KOG0629|consen  305 KLTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLM  383 (510)
T ss_pred             hccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHH
Confidence            11 11111234567889887 7788887776543 4443332211        122211     11110       1112


Q ss_pred             hCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-e---cCCCceEEEEEeCCC---------------CCHHHHHHHHH
Q 014492          326 LQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-P---YPSYSNFILCEVTSG---------------MDAKKLKDDLA  384 (423)
Q Consensus       326 l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~---~p~~~~~~~~~~~~~---------------~~~~~l~~~L~  384 (423)
                      ++.  ....++...+.-++.+++.+.|++-+... +   .|...++.+..+|+.               .-+..+...+.
T Consensus       384 wkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm  463 (510)
T KOG0629|consen  384 WKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMM  463 (510)
T ss_pred             HHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHH
Confidence            221  12367788888899999999999876533 2   255566666555521               12344556667


Q ss_pred             hCCcEEEeCCC-CCCCCeEEEEecC----hhhHHHHHHHHhhh
Q 014492          385 KMGVMIRHYNN-KELKGYVRVSVGK----PEHTDALMECLMHL  422 (423)
Q Consensus       385 ~~gI~v~~~~~-~~~~~~iRis~~~----~~~~~~l~~al~~l  422 (423)
                      ++|-....+.. ...++++|+.++.    ..+.+.+.+-|.++
T Consensus       464 ~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl  506 (510)
T KOG0629|consen  464 KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL  506 (510)
T ss_pred             hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence            78877766554 3446799998763    45667777777665

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.42  E-value=4.7e-05  Score=71.41  Aligned_cols=276  Identities=12%  Similarity=0.077  Sum_probs=162.5

Q ss_pred             hHHHHHHHHHHhCCCCC-cEEE-eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH-HHHHHCCC--eEEEec-CCC--C
Q 014492          131 SRRLRAALAKDSGLESD-HILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGA--AVVKVP-RKS--D  202 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~-~i~~-t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~--~~~~v~-~~~--~  202 (423)
                      ..+.++.+.+.++++.+ .|++ -.|++..+.++...|+.++..-.+..-.|.... ..++..+-  ++.... ...  +
T Consensus        52 ~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~  131 (365)
T COG1932          52 LEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYG  131 (365)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCcc
Confidence            34677888889999665 5555 456777788888888876543133344554322 22333443  222222 112  2


Q ss_pred             CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccCh
Q 014492          203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS  282 (423)
Q Consensus       203 ~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~S  282 (423)
                      .-++++...  +. .+...|+.|+-..-+|+-++.  ...+.. +.++|+|-.-.-+.. +-     +-..-.++-.+.-
T Consensus       132 ~iP~~~~~~--~~-~~~ayv~~~~NeTi~Gv~v~~--~p~~~~-~~~~v~D~SS~ilsr-~i-----Dvsk~dviyagaQ  199 (365)
T COG1932         132 SIPDLSKWD--FS-DNDAYVHFCWNETISGVEVPE--LPDIGS-DGLLVADASSAILSR-PI-----DVSKYDVIYAGAQ  199 (365)
T ss_pred             CCCChhhcc--cC-CCccEEEEecCCcccceEccC--CCCCCC-CceEEEecccHHhcC-CC-----ChhHcceEEEehh
Confidence            233444433  32 234447788777778887761  111111 378899976543332 11     1122236777889


Q ss_pred             hhhcccCccccccccCHHHHHHHHHhcC--------------CC-CCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHH
Q 014492          283 KRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------PY-NVSVAAEVAACAALQ---NPIYLEKVKEALIKERE  344 (423)
Q Consensus       283 K~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------~~-~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~  344 (423)
                      |.+|..|  ++.++.++++++++.....              .+ +++.++.+....+++   ....++.+.++-++..+
T Consensus       200 KnlGpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~  277 (365)
T COG1932         200 KNLGPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQ  277 (365)
T ss_pred             hccCccc--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            9999888  7889999999998865411              12 233333333333332   22336778888899999


Q ss_pred             HHHHHHccCCCCee--cC--CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHH
Q 014492          345 RLFKLLKDVPFLNP--YP--SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALME  417 (423)
Q Consensus       345 ~l~~~L~~~~~~~~--~p--~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~  417 (423)
                      .|++.+++-+|...  .+  ..-+-+.+++.+..-.+.|...+.++|+..--|.  ...+.+|+++.   ..++.+.|.+
T Consensus       278 ~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~  355 (365)
T COG1932         278 LLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTD  355 (365)
T ss_pred             HHHHHHHhCCccccccchhhccceeEEEEcCcHHHHHHHHHHHHHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHH
Confidence            99999988776542  22  1234566777644345667777777887776653  23345999975   3556677777


Q ss_pred             HHhhh
Q 014492          418 CLMHL  422 (423)
Q Consensus       418 al~~l  422 (423)
                      .++.+
T Consensus       356 fm~~f  360 (365)
T COG1932         356 FMDWF  360 (365)
T ss_pred             HHHHH
Confidence            66643

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.39  E-value=0.00029  Score=74.95  Aligned_cols=261  Identities=15%  Similarity=0.112  Sum_probs=157.7

Q ss_pred             HHHHHHHHHhCCCCCcEEEeCCHHHHHH---HHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCCCCCC
Q 014492          133 RLRAALAKDSGLESDHILVGCGADELID---LIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSL  205 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~---~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~~~~~  205 (423)
                      ++...++++.|.+-.|--+--|++.+-+   ++.+.--.+..+|+++.-.|+.+....+    ..|++++.         
T Consensus       128 e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~---------  198 (954)
T PRK12566        128 NFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV---------  198 (954)
T ss_pred             HHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE---------
Confidence            7888889999987555445455554433   3333211224679999999987665443    46777664         


Q ss_pred             CHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhh
Q 014492          206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       206 d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~  284 (423)
                        +++++.+. .++.++++.+||. .|.+.+.+++.++++. |.++| +.+.- +..  ..+...+..+.+|++++. +.
T Consensus       199 --~~~~~~~~-~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal~~-~~~d~-laL--~ll~~Pge~GADI~vG~~-Q~  269 (954)
T PRK12566        199 --DAVDNLAA-HAVFGALLQYPDT-HGEIRDLRPLIDQLHGQQALAC-VAADL-LSL--LVLTPPGELGADVVLGST-QR  269 (954)
T ss_pred             --cchhhcCC-CCEEEEEEECCCC-ceEEccHHHHHHHHHHcCCEEE-EEeCH-HHH--hCCCChhhcCCcEEeeCC-Cc
Confidence              23334443 4688999999986 8999999999888887 77655 32211 110  111222345566777753 33


Q ss_pred             hcc----cCccccccccCHHHHHHHH----------------------------HhcCCCCCcH----HHH-HHHHHHhC
Q 014492          285 AGL----AGLRVGYGAFPLSIIEYLW----------------------------RAKQPYNVSV----AAE-VAACAALQ  327 (423)
Q Consensus       285 ~g~----~G~R~G~i~~~~~~~~~l~----------------------------~~~~~~~~~~----~~~-~a~~~~l~  327 (423)
                      ||+    .|--.||+.+.+++.+++-                            +-+...++-+    .+. .+.+.++.
T Consensus       270 fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~  349 (954)
T PRK12566        270 FGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYH  349 (954)
T ss_pred             CCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHh
Confidence            443    3445788887777665431                            1122222111    122 22223444


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEE
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVS  405 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis  405 (423)
                      .++.++++.++...+..++.+.|++.+ +.+... .+|  +.+++  +.++.++.+...++||-++..+    ++.+.||
T Consensus       350 Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~-~fF~~~~v~~--~~~~~~~~~~a~~~~~n~r~~~----~~~~~~s  421 (954)
T PRK12566        350 GPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNR-HFFDTLTLEV--GGAQAAIIESAEAARINLRILG----RGRLGVS  421 (954)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccC-CccceEEEEc--cCCHHHHHHHHHHCCCeeEEeC----CCeEEEE
Confidence            567788999999999999999999865 443222 445  33444  2257788888889999999875    4678888


Q ss_pred             ecChhhHHHHHHHH
Q 014492          406 VGKPEHTDALMECL  419 (423)
Q Consensus       406 ~~~~~~~~~l~~al  419 (423)
                      +....+.+++...+
T Consensus       422 ~de~~~~~~~~~~~  435 (954)
T PRK12566        422 LDETCDEATVARLF  435 (954)
T ss_pred             eCCCCCHHHHHHHH
Confidence            86433334444433

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.32  E-value=6e-07  Score=84.78  Aligned_cols=214  Identities=19%  Similarity=0.170  Sum_probs=50.8

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch------hhHHHHHHCCCeEEEecCCCCCC
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT------MYEFDAAVNGAAVVKVPRKSDFS  204 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~------~~~~~~~~~g~~~~~v~~~~~~~  204 (423)
                      +..+.+.++...|.  +..+++|+...++.+++.+++. |.+|++..-.-.      .+....+..|++++.|-..+  .
T Consensus        49 ~~~v~~ll~~ltgA--eaA~VvNnnaAAv~L~l~~la~-~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~  123 (367)
T PF03841_consen   49 YAHVEELLCELTGA--EAALVVNNNAAAVLLALNTLAK-GKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--R  123 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccc--cccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc--c
Confidence            34577777777774  4567777777898888887764 566776543322      24456677899999987432  4


Q ss_pred             CCHHHHHHHhhcCCceEEEEcCCCCCc--C--cCCCHHHHHHHHcC-CCEEEEccCCcccc--------CCCchhhhhcc
Q 014492          205 LNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PILVVLDEAYTEFS--------GLESRMEWVKK  271 (423)
Q Consensus       205 ~d~~~l~~~i~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~i~~~-~~~li~Deay~~~~--------~~~~~~~~~~~  271 (423)
                      -.+++.+++|. +++.+++-.+++|-.  |  .-.+.+++.+|++. ++++|+|-.-..+.        ..++....+ .
T Consensus       124 t~~~Dye~AI~-e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~-~  201 (367)
T PF03841_consen  124 THLSDYEKAIT-ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL-A  201 (367)
T ss_dssp             --------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC-C
T ss_pred             ccccccccccc-ccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh-h
Confidence            45788999997 788888777877763  2  13488899999987 99999998753221        112222222 3


Q ss_pred             CCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---h----------HHHHHHH
Q 014492          272 HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---P----------IYLEKVK  336 (423)
Q Consensus       272 ~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~----------~~~~~~~  336 (423)
                      .+..+++.|-.|.+|  |-..|.+++.+++++++++.  .+.+-+.-....++.+.|+.   +          ..+.+..
T Consensus       202 ~GaDlV~fSGdKlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~  279 (367)
T PF03841_consen  202 AGADLVTFSGDKLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSL  279 (367)
T ss_dssp             CT-SEEEEETTSSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---------------------
T ss_pred             cCCCEEEEECCCcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccc
Confidence            455688899999876  56689999999999998764  34456666665555555541   1          1244455


Q ss_pred             HHHHHHHHHHHHHHccC
Q 014492          337 EALIKERERLFKLLKDV  353 (423)
Q Consensus       337 ~~~~~~~~~l~~~L~~~  353 (423)
                      +.++++.+++...|+..
T Consensus       280 ~~L~~rA~~l~~~l~~~  296 (367)
T PF03841_consen  280 EELRARAERLAAQLKAA  296 (367)
T ss_dssp             -----------------
T ss_pred             ccccccccccccccccc
Confidence            66777777777777654

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=97.92  E-value=0.0022  Score=61.55  Aligned_cols=278  Identities=17%  Similarity=0.065  Sum_probs=142.1

Q ss_pred             HhCCC-CCcEEEeCCHHHH-HHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHH
Q 014492          141 DSGLE-SDHILVGCGADEL-IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADA  213 (423)
Q Consensus       141 ~~g~~-~~~i~~t~G~~~a-l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~  213 (423)
                      ..|+. ....++.+.+|.. +.+.+.++.  ..++.|+.+.-.+-.....+..+|.+++.||.   .+....|.+.+++.
T Consensus        68 ~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~  147 (389)
T PF05889_consen   68 LAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAK  147 (389)
T ss_dssp             HTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHH
T ss_pred             HcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHH
Confidence            34764 3556777766633 334444443  34688888777776666667779999999992   23334568888888


Q ss_pred             hhc--CCceEEEEcCCCCCcCcCCC-HHHHHHHHcC-CCEEEEccCCccccCCCchhhhh----ccCCcEEEEccChhhh
Q 014492          214 VER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRA  285 (423)
Q Consensus       214 i~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~----~~~~~~i~i~S~SK~~  285 (423)
                      +++  .++.+.++++++---|..-+ .+++.+||+. |+..|+-.||+-=..  .....+    ....-.+++.|.-|.|
T Consensus       148 i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~--~~~~~i~~a~~~GRvda~vqS~dkNF  225 (389)
T PF05889_consen  148 IEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS--KCMHLIQQAWRVGRVDAFVQSTDKNF  225 (389)
T ss_dssp             HHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H--HHHHHHHHHHHHSTCSEEEEEHHHHH
T ss_pred             HHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH--HHHHHHHHHHhcCCcceeeeecCCCE
Confidence            864  34567777777655667776 8889999987 999999999983110  011111    1123347899999999


Q ss_pred             cccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh--HH---HHHHHHHHHHHHHHHHHHHccCCCCe-e
Q 014492          286 GLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP--IY---LEKVKEALIKERERLFKLLKDVPFLN-P  358 (423)
Q Consensus       286 g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--~~---~~~~~~~~~~~~~~l~~~L~~~~~~~-~  358 (423)
                      -. +..-+.+.+ .+..+..+.+.-..-....+.......++.-+  .|   +.++.+-+....+++.+.-++.+... .
T Consensus       226 ~V-PvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~  304 (389)
T PF05889_consen  226 MV-PVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLE  304 (389)
T ss_dssp             CE-ESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSS
T ss_pred             Ee-cCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Confidence            54 332333433 56777777654322112222223333333321  11   22333333333333333333333111 1


Q ss_pred             cCCCceEEEEEeCC--C---CCHHHHHHHHHhCCc---EE-EeCCC-------CCCCCeEEEEe--c-ChhhHHHHHHHH
Q 014492          359 YPSYSNFILCEVTS--G---MDAKKLKDDLAKMGV---MI-RHYNN-------KELKGYVRVSV--G-KPEHTDALMECL  419 (423)
Q Consensus       359 ~p~~~~~~~~~~~~--~---~~~~~l~~~L~~~gI---~v-~~~~~-------~~~~~~iRis~--~-~~~~~~~l~~al  419 (423)
                      .|....-+.+.++.  .   .+...|...|..+||   .+ .+...       .....|+-++-  + +.+|.|.+.+.|
T Consensus       305 ~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL  384 (389)
T PF05889_consen  305 TPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRL  384 (389)
T ss_dssp             STT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHH
T ss_pred             CCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHH
Confidence            24343334445441  1   234678888887765   32 22211       01126788853  3 455666666666


Q ss_pred             hh
Q 014492          420 MH  421 (423)
Q Consensus       420 ~~  421 (423)
                      ++
T Consensus       385 ~k  386 (389)
T PF05889_consen  385 DK  386 (389)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.88  E-value=0.0022  Score=64.30  Aligned_cols=282  Identities=16%  Similarity=0.133  Sum_probs=154.6

Q ss_pred             HHHHHHHHHhCCCCCcEEEeCCHH---HHHHHHHHHhcCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCC
Q 014492          133 RLRAALAKDSGLESDHILVGCGAD---ELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL  205 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~i~~t~G~~---~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  205 (423)
                      +|++.+++..|.+.-.+..-+|++   .++..+-..+...|+    ..+++...|......+.++|.++++|..+.++.+
T Consensus       586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i  665 (1001)
T KOG2040|consen  586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI  665 (1001)
T ss_pred             HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence            455555555575433333334443   334333333334442    3567888888777888899999999999888899


Q ss_pred             CHHHHHHHhhc--CCceEEEEcCCCCCcCcC-CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccC
Q 014492          206 NVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF  281 (423)
Q Consensus       206 d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~  281 (423)
                      |..+|++..++  ++..++.++.|+. .|+. -.++++.++.+. |.-|..|.+-..-.-+-.   ..++.+..+.=--+
T Consensus       666 d~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc---~pGd~GaDV~HLNL  741 (1001)
T KOG2040|consen  666 DMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLC---RPGDIGADVCHLNL  741 (1001)
T ss_pred             cHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceeccc---CCccccccceeecc
Confidence            99999988764  3567888888875 3543 244555555544 888999988643211100   01123333444457


Q ss_pred             hhhhccc----CccccccccCHHHHHHHHHh------------------cCCCCCcHHHHHHHHHHhC--ChHHHHHHHH
Q 014492          282 SKRAGLA----GLRVGYGAFPLSIIEYLWRA------------------KQPYNVSVAAEVAACAALQ--NPIYLEKVKE  337 (423)
Q Consensus       282 SK~~g~~----G~R~G~i~~~~~~~~~l~~~------------------~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~  337 (423)
                      +|.|.+|    |-.+|=|...+.+...+-..                  ..+|+.+. ......++++  ....+...-+
T Consensus       742 HKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~-ILpISwaYikmMG~~GL~~as~  820 (1001)
T KOG2040|consen  742 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSAL-ILPISWAYIKMMGSGGLKDASK  820 (1001)
T ss_pred             cceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcce-eehhHHHHHHHhcccccchhhH
Confidence            7887665    22233333333332222110                  01121111 1111122222  1122333333


Q ss_pred             HHHHHHHHHHHHHccCCCCeecCCCce----EEEEEe-----CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC
Q 014492          338 ALIKERERLFKLLKDVPFLNPYPSYSN----FILCEV-----TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK  408 (423)
Q Consensus       338 ~~~~~~~~l~~~L~~~~~~~~~p~~~~----~~~~~~-----~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~  408 (423)
                      .---+.+++.++|+..-.+......+.    |+ +++     ..++.+.+++++|.++|.--...+ .+..+++-|-.+.
T Consensus       821 ~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFI-lD~r~fK~~agieavDvAKRL~DYgFHaPTms-wPV~gtLMIEPTE  898 (1001)
T KOG2040|consen  821 IAILNANYMAKRLESHYKILFRGENGLVAHEFI-LDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMS-WPVAGTLMIEPTE  898 (1001)
T ss_pred             HHhhhhHHHHHHHhhccceeEecCCcceeeeee-eechhhccccCCcHHHHHHHHHhccCCCCccc-cccCCceEeccCc
Confidence            333467788888976422222222221    22 222     246889999999999986655444 3456788888776


Q ss_pred             hhhHHHHHHHHhh
Q 014492          409 PEHTDALMECLMH  421 (423)
Q Consensus       409 ~~~~~~l~~al~~  421 (423)
                      .++.+++++.++.
T Consensus       899 SE~k~ElDRfcdA  911 (1001)
T KOG2040|consen  899 SEDKAELDRFCDA  911 (1001)
T ss_pred             cccHHHHHHHHHH
Confidence            6655666655544

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=97.80  E-value=0.0033  Score=57.64  Aligned_cols=280  Identities=16%  Similarity=0.103  Sum_probs=165.9

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC---CeEEEcCCCch----hhHHHHHHCCCeE----EEec-
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG---DKIVDCPPTFT----MYEFDAAVNGAAV----VKVP-  198 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~g~~~----~~v~-  198 (423)
                      .+..-..++...|...++|.+.|+-+-.++.++..+.+|-   -+|+++.-.|+    .+...++..|..+    +.+. 
T Consensus       113 De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP  192 (465)
T KOG3846|consen  113 DEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP  192 (465)
T ss_pred             chhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc
Confidence            4567788888999988999999999999999999998775   46888877775    5566777788764    2332 


Q ss_pred             CCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcE
Q 014492          199 RKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (423)
Q Consensus       199 ~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~  275 (423)
                      .+.+..+-.+++.+.|+++  .+.+|+++..+.-||+.++...|..--+. |++|=.|-+|+..    .....+..++..
T Consensus       193 REGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg----NVpL~LHdWgVD  268 (465)
T KOG3846|consen  193 REGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG----NVPLQLHDWGVD  268 (465)
T ss_pred             cccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc----CCceEEeecCCc
Confidence            2223456778888888643  45667777899999999999998855555 8999899888722    222233355555


Q ss_pred             EEEccChhhhcccCcc-ccccccCHHH----HHHHH---------HhcC-----------CC---CCcHHHHHHHHHHhC
Q 014492          276 IVLRTFSKRAGLAGLR-VGYGAFPLSI----IEYLW---------RAKQ-----------PY---NVSVAAEVAACAALQ  327 (423)
Q Consensus       276 i~i~S~SK~~g~~G~R-~G~i~~~~~~----~~~l~---------~~~~-----------~~---~~~~~~~~a~~~~l~  327 (423)
                      +-|+---| ++.+|-. +|-+...+..    ..++.         +.++           .|   +++.+...+....|+
T Consensus       269 FACWCSYK-YlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe  347 (465)
T KOG3846|consen  269 FACWCSYK-YLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLE  347 (465)
T ss_pred             eEEEeeec-ccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHH
Confidence            66655556 3334422 3333332221    12221         0000           01   334444444444443


Q ss_pred             Ch--HHHHHHHHHHHHHHHHHHHHHccCC-----------CCe-ecC----CCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          328 NP--IYLEKVKEALIKERERLFKLLKDVP-----------FLN-PYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       328 ~~--~~~~~~~~~~~~~~~~l~~~L~~~~-----------~~~-~~p----~~~~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                      --  --+++.+++---...++...++...           ++. +.|    +.|.-+.+.+.  .+.+.++++|.++|+.
T Consensus       348 ~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fs--sp~~~vfqeL~krGv~  425 (465)
T KOG3846|consen  348 LFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFS--SPTPKVFQELHKRGVI  425 (465)
T ss_pred             HHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeC--CCchHHHHHHHHcCee
Confidence            21  1134444443333333333332211           111 122    23445555553  2457899999999998


Q ss_pred             EEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          390 IRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       390 v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      +-...    ++.||+...    +-.+.-.+..+|..
T Consensus       426 ~DkR~----PNvIRvAPvpLYN~f~Dvy~f~n~L~e  457 (465)
T KOG3846|consen  426 GDKRR----PNVIRVAPVPLYNTFSDVYIFVNALNE  457 (465)
T ss_pred             ccccC----CCceEeecchhhccHHHHHHHHHHHHH
Confidence            75543    678999853    44455555555543

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=97.80  E-value=0.00091  Score=62.35  Aligned_cols=198  Identities=17%  Similarity=0.155  Sum_probs=110.5

Q ss_pred             HHHHHHHhhcC-----CceEEEEcCCCCCcCc-CCCHHHHHH---HHcC-CCEEEEccCCccccCCCchhh----hhccC
Q 014492          207 VELIADAVERE-----KPKCIFLTSPNNPDGS-IINDEDLLK---ILEM-PILVVLDEAYTEFSGLESRME----WVKKH  272 (423)
Q Consensus       207 ~~~l~~~i~~~-----~~~~i~l~~p~NPtG~-~~~~~~l~~---i~~~-~~~li~Deay~~~~~~~~~~~----~~~~~  272 (423)
                      ++++++.|.+.     .+.++++..-+..-|. ..+.+.++.   |++. ++.+|+||++......+..+.    .++..
T Consensus       255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P  334 (484)
T KOG1405|consen  255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP  334 (484)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence            45666666432     2456676666777775 446665554   4444 999999999976543332211    11122


Q ss_pred             CcEEEEccChhhhcccCccccccccCHHHH-HHHHHhcCCCCCcHHHHHHHH---HHhCChHHHHHHHHHHHHHHHHHHH
Q 014492          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSII-EYLWRAKQPYNVSVAAEVAAC---AALQNPIYLEKVKEALIKERERLFK  348 (423)
Q Consensus       273 ~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~-~~l~~~~~~~~~~~~~~~a~~---~~l~~~~~~~~~~~~~~~~~~~l~~  348 (423)
                      .   -+.+|||-|- .|   ||.. +++++ ..-.+.-..|...+.-...+.   ..+.+++.+++..    +.-+.|.+
T Consensus       335 p---D~vTFSKK~q-~g---Gffh-~~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~----~vG~~l~~  402 (484)
T KOG1405|consen  335 P---DVVTFSKKFQ-TG---GFFH-DEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVA----HVGKALLK  402 (484)
T ss_pred             c---cceehhhhhh-cC---cccc-CcccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHH----HHHHHHHH
Confidence            2   2346899885 55   6554 33332 112222234543333222222   3333334344333    33344444


Q ss_pred             HHc----cCCC-CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          349 LLK----DVPF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       349 ~L~----~~~~-~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      .|.    +.+. +.-..+.|.|+.+++|.+.-.+.++..++-+||-+-.++    ...||+-.+   ...+.+-+.+.++
T Consensus       403 gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg----~~siRfRPsLvf~~~Ha~i~l~~~~  478 (484)
T KOG1405|consen  403 GLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGCG----DKSIRFRPSLVFRKHHADIFLDIFD  478 (484)
T ss_pred             HHHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHcCceecccc----cceeeeccceeehhhhHHHHHHHHH
Confidence            443    3443 223456899999999987778889998989999887766    467788654   2233344444444

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=97.73  E-value=0.015  Score=56.39  Aligned_cols=248  Identities=9%  Similarity=0.018  Sum_probs=128.3

Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCC----ceEEEEcCCC-CCcCcCCCHHHHHHHHcC
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK----PKCIFLTSPN-NPDGSIINDEDLLKILEM  246 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~----~~~i~l~~p~-NPtG~~~~~~~l~~i~~~  246 (423)
                      .+.+.+-++.+.+..+...|+++..++.+.+++++.+.|+++|.+..    +-.+++.+.. .-+-..-.++++..+|+.
T Consensus       184 V~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~  263 (511)
T KOG0628|consen  184 VAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCRE  263 (511)
T ss_pred             eEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhh
Confidence            34567788889999999999999999988899999999999997532    2233333332 112233467778888887


Q ss_pred             -CCEEEEccCCccccCCCc-hhhhhccCC-cEEEEccChhhhcccCccccccc------------cCHHHHHHH-HHhcC
Q 014492          247 -PILVVLDEAYTEFSGLES-RMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGA------------FPLSIIEYL-WRAKQ  310 (423)
Q Consensus       247 -~~~li~Deay~~~~~~~~-~~~~~~~~~-~~i~i~S~SK~~g~~G~R~G~i~------------~~~~~~~~l-~~~~~  310 (423)
                       |+|+.+|.+|++-++.-. .......-+ ..=+....||. ++.-.-+.-+.            .++..++.- .....
T Consensus       264 ~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~  342 (511)
T KOG0628|consen  264 EGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAP  342 (511)
T ss_pred             cCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhhccCC
Confidence             999999999995443211 111110000 00112223442 22222111111            122222111 11111


Q ss_pred             C---CCCcHHH-HHHHHHH--hCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCC-CCCHHHHH
Q 014492          311 P---YNVSVAA-EVAACAA--LQN--PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS-GMDAKKLK  380 (423)
Q Consensus       311 ~---~~~~~~~-~~a~~~~--l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~-~~~~~~l~  380 (423)
                      .   |.++..- -.++..+  ++.  .+.+++..++..+..+.+.+.+.+-+... +.+..-..+.+++.+ +...+.|.
T Consensus       343 Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~ne~Ll  422 (511)
T KOG0628|consen  343 DYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEINEALL  422 (511)
T ss_pred             CccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHHHHHHH
Confidence            1   2222110 0111111  111  12233333333445555555554443333 344444556677753 34567788


Q ss_pred             HHHH-hCCcEEEeCCCCCCCCeEEEEecC-hhhHHHHHHHHhh
Q 014492          381 DDLA-KMGVMIRHYNNKELKGYVRVSVGK-PEHTDALMECLMH  421 (423)
Q Consensus       381 ~~L~-~~gI~v~~~~~~~~~~~iRis~~~-~~~~~~l~~al~~  421 (423)
                      +++. ...|.+.+.. ..+.-.||++++. ..+.+++.++.+.
T Consensus       423 ~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~  464 (511)
T KOG0628|consen  423 NRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKI  464 (511)
T ss_pred             HHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHH
Confidence            8887 5678787765 3345579999863 2233555555443

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.07  E-value=0.32  Score=49.41  Aligned_cols=264  Identities=17%  Similarity=0.194  Sum_probs=146.9

Q ss_pred             HHHHHHHHHhCCCCCc-EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCCCCCCCCH
Q 014492          133 RLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNV  207 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~-i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~~~~~~d~  207 (423)
                      .....+++..|++-.+ -++--|+..+=.+++..-..++.++++..-+|+-....++-    +|++++..+        +
T Consensus       167 NyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~  238 (1001)
T KOG2040|consen  167 NYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------I  238 (1001)
T ss_pred             hhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecC--------H
Confidence            3456667777876543 34444544443333333345667799999999865555432    344433322        2


Q ss_pred             HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492          208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      ++...-  ..+...+++..|.. .|.+.+.+++.++++. +.++++-.--..+    ..+......+..|.++|--. ||
T Consensus       239 ~~~~~s--~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaL----tiLrpPgefGaDIavGSsQR-FG  310 (1001)
T KOG2040|consen  239 KEADYS--SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLAL----TILRPPGEFGADIAVGSSQR-FG  310 (1001)
T ss_pred             HHhhcc--ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHH----HccCChhhcCceeeeccccc-cC
Confidence            222221  24677888888877 6999999999999998 6555432111111    11222234566688888544 55


Q ss_pred             cc----CccccccccCHHHHHHH----------------------------HHhcCCCCCcHH-----HHHHHHHHhCCh
Q 014492          287 LA----GLRVGYGAFPLSIIEYL----------------------------WRAKQPYNVSVA-----AEVAACAALQNP  329 (423)
Q Consensus       287 ~~----G~R~G~i~~~~~~~~~l----------------------------~~~~~~~~~~~~-----~~~a~~~~l~~~  329 (423)
                      +|    |--.||....+++.+.+                            ++-+...++-..     ...|..+.+..+
T Consensus       311 VPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp  390 (1001)
T KOG2040|consen  311 VPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGP  390 (1001)
T ss_pred             ccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCc
Confidence            44    22233333333322211                            011111111110     122333444446


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--  407 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--  407 (423)
                      ..++++.+++....-.|...|++.+- .+. ...+|=.+++.-+-+.+++.++..+++|-++...    ++.|-+++-  
T Consensus       391 ~gL~~IArrvh~~T~~l~~~l~~agh-el~-~k~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~e----d~tigvslDET  464 (1001)
T KOG2040|consen  391 HGLKEIARRVHNLTLILAEGLKNAGH-ELQ-HKPFFDTLKIRCGCSAEEVLDRAAKRQINLRLVE----DGTIGVSLDET  464 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcch-hhc-cccccceEEEEecCcHHHHHHHHHhhcCceEEee----cCceEEeeccc
Confidence            77889999999999999999987662 221 2235544444324478999999888889888776    566777774  


Q ss_pred             -ChhhHHHHHHH
Q 014492          408 -KPEHTDALMEC  418 (423)
Q Consensus       408 -~~~~~~~l~~a  418 (423)
                       +..|.++|...
T Consensus       465 v~~~DvddLl~v  476 (1001)
T KOG2040|consen  465 VTEKDVDDLLWV  476 (1001)
T ss_pred             ccHHHHHHHHHH
Confidence             34444555443

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=95.73  E-value=0.68  Score=42.49  Aligned_cols=272  Identities=11%  Similarity=0.074  Sum_probs=146.8

Q ss_pred             HHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhc--CCC---CeEEEcCCCch--hhHHHHHHCCCe-EEEecCCC
Q 014492          132 RRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVL--DPG---DKIVDCPPTFT--MYEFDAAVNGAA-VVKVPRKS  201 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~--~~g---d~Vl~~~p~y~--~~~~~~~~~g~~-~~~v~~~~  201 (423)
                      .+.+..+.++++++.+  -+++-.|++.-+..+...|+  +.|   |-|++  -+|.  .+..+.+ +|.. .+..+...
T Consensus        55 ~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVT--GsWS~KA~~EAkk-~~~~~~V~~~~k~  131 (370)
T KOG2790|consen   55 NDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVT--GSWSAKAAEEAKK-YGTPNIVIPKLKS  131 (370)
T ss_pred             HHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccCCccceEEe--ccccHHHHHHHHh-hCCceEEeccccc
Confidence            4566667778888543  44566677777777766676  344   44554  3453  4444444 4433 33333211


Q ss_pred             -C--CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492          202 -D--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (423)
Q Consensus       202 -~--~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (423)
                       .  --+|.+.++.   +++.+.++.|.--...|+-++.--   +-+- +.++|.|-.-- |...+-     +.....++
T Consensus       132 y~ygkvPd~~~w~~---~~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSn-flSrpv-----Dvsk~gvi  199 (370)
T KOG2790|consen  132 YTYGKVPDPSTWEL---NPDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSN-FLSRPV-----DVSKFGVI  199 (370)
T ss_pred             cccCcCCChhhccc---CCCccEEEEecCceeeceecCCCC---CCCCCCceEEEecccc-hhcCCc-----cchhcceE
Confidence             1  2345555543   245668888866666676554322   1122 77888886533 322221     12233477


Q ss_pred             EccChhhhcccCccccccccCHHHHHHHHHhcC-------------CC-CCcHHHHHHHHHHh---CChHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------PY-NVSVAAEVAACAAL---QNPIYLEKVKEALI  340 (423)
Q Consensus       278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-------------~~-~~~~~~~~a~~~~l---~~~~~~~~~~~~~~  340 (423)
                      +.+.-|.+|.+|+  -.++..++++........             .| +++.+..++.--.+   .....+..+.+.-.
T Consensus       200 ~aGAQKN~G~aG~--Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~  277 (370)
T KOG2790|consen  200 FAGAQKNVGPAGV--TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQ  277 (370)
T ss_pred             EeccccccCcccc--EEEEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHH
Confidence            7888999999985  446667887765543321             12 23333333222222   22233667777777


Q ss_pred             HHHHHHHHHHccCCCCeec---CC--CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhH
Q 014492          341 KERERLFKLLKDVPFLNPY---PS--YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHT  412 (423)
Q Consensus       341 ~~~~~l~~~L~~~~~~~~~---p~--~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~  412 (423)
                      +..+.+++.+.+..+...-   |.  .-+-+.+++.+..-.++|.....+++..-..|.  ..-|.+|-|+=   +-++.
T Consensus       278 ~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~LKGh--RSVGGiRASlYNAisv~~~  355 (370)
T KOG2790|consen  278 EKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQLKGH--RSVGGIRASLYNAISVEEV  355 (370)
T ss_pred             HHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhccccc--cccccchhhhhccccHHHH
Confidence            8888899999876433322   22  234566666432223445544444443322222  22456888852   34556


Q ss_pred             HHHHHHHhhh
Q 014492          413 DALMECLMHL  422 (423)
Q Consensus       413 ~~l~~al~~l  422 (423)
                      ++|...++.+
T Consensus       356 q~L~~~m~~F  365 (370)
T KOG2790|consen  356 QKLAAFMKEF  365 (370)
T ss_pred             HHHHHHHHHH
Confidence            7787777654

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=93.15  E-value=0.65  Score=42.07  Aligned_cols=120  Identities=14%  Similarity=0.100  Sum_probs=69.1

Q ss_pred             HHCCCeEEEec--CC-CCCCCCHHHHHHHhhcCCceEEEEcCCC----CCcCcCCCHHHHHHHHcC-CCEEEEccCCccc
Q 014492          188 AVNGAAVVKVP--RK-SDFSLNVELIADAVEREKPKCIFLTSPN----NPDGSIINDEDLLKILEM-PILVVLDEAYTEF  259 (423)
Q Consensus       188 ~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~----NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~  259 (423)
                      -.+|.+++.+.  .+ +...-|++.+++.+++-....|...+-.    -| -..-..+++..||.. +++-|+..+|..-
T Consensus       121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfap-r~pd~leaiaaica~~diphivnnayglq  199 (432)
T KOG3843|consen  121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAP-RSPDNLEAIAAICAAHDIPHIVNNAYGLQ  199 (432)
T ss_pred             HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCC-CCCchHHHHHHHHHccCchhhhccccccc
Confidence            34788888776  22 2334589999999876566644432211    11 122345677777776 9999999999732


Q ss_pred             cCCC-chhhhhcc-CCcEEEEccChhhhcccCcccccccc--CHHHHHHHHHhcC
Q 014492          260 SGLE-SRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWRAKQ  310 (423)
Q Consensus       260 ~~~~-~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~~~~~l~~~~~  310 (423)
                      ...- ..+..... .....++.|+-|.|..|=  -|.+++  +..+++.+.+...
T Consensus       200 see~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk~n~iq~iak~yp  252 (432)
T KOG3843|consen  200 SEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFKDNFIQEIAKMYP  252 (432)
T ss_pred             hHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhHHHHHHHHHHhCC
Confidence            2100 01111111 222357889999987652  144443  6777777766543

>PLN02672 methionine S-methyltransferase

Probab=87.41  E-value=7.2  Score=43.36  Aligned_cols=172  Identities=19%  Similarity=0.252  Sum_probs=96.8

Q ss_pred             CCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc---hhhHHHHHHCC------
Q 014492          127 PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF---TMYEFDAAVNG------  191 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y---~~~~~~~~~~g------  191 (423)
                      |..|...+|..||.++    +  +.+++|++.++-..+++.+++.+ .|-=.++-..-+-   .-|.......|      
T Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (1082)
T PLN02672        424 PPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLF-SPRLAIVDEHLTRWLPKKWLTSLAIENATSDSK  502 (1082)
T ss_pred             CCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhh-ChHHHhhhhhhhccCCHHHHhHhhhhcccccCc
Confidence            4568889999999875    3  57899999999999999998843 3321111000111   11111111111      


Q ss_pred             ----CeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCC-ccccCC
Q 014492          192 ----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAY-TEFSGL  262 (423)
Q Consensus       192 ----~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay-~~~~~~  262 (423)
                          +.|+.-|.    .  .+.+.+.+++-++++|+..-..   +-..+...++.|.+   . |.+++.|..- .++...
T Consensus       503 ~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  573 (1082)
T PLN02672        503 SDDVITVIEAPR----Q--SDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSL  573 (1082)
T ss_pred             cCCeEEEEeCCC----c--chHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccC
Confidence                22333331    1  1355666666788988865333   22233444444443   3 9999999873 334432


Q ss_pred             Cc---hhhhhcc---CCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHh
Q 014492          263 ES---RMEWVKK---HDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA  308 (423)
Q Consensus       263 ~~---~~~~~~~---~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~  308 (423)
                      +.   ..+.+..   ..+..++.++-|.-=.+-+-+.+++. +..+.+.+.+.
T Consensus       574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  626 (1082)
T PLN02672        574 PGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKT  626 (1082)
T ss_pred             CCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHH
Confidence            22   2233322   34456666777765457888888887 44555555543

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=86.95  E-value=12  Score=33.32  Aligned_cols=155  Identities=18%  Similarity=0.231  Sum_probs=89.4

Q ss_pred             cEEEeCCHHHHHHHHHHHhcCCCCeEE----E--cCC--------CchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHH
Q 014492          148 HILVGCGADELIDLIMRCVLDPGDKIV----D--CPP--------TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA  213 (423)
Q Consensus       148 ~i~~t~G~~~al~~~~~~l~~~gd~Vl----~--~~p--------~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~  213 (423)
                      -+.+-+|+......+..++ +.|..|.    +  .++        ........++..|..++.........-..+++.++
T Consensus         3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~   81 (223)
T COG2102           3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEA   81 (223)
T ss_pred             EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHH
Confidence            3567778777776666644 4553322    1  122        11234456777899998888654344467888888


Q ss_pred             hhcCCceEEEEcCCCCCcCcCCCHHHH---HHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcc
Q 014492          214 VEREKPKCIFLTSPNNPDGSIINDEDL---LKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       214 i~~~~~~~i~l~~p~NPtG~~~~~~~l---~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~  287 (423)
                      +..-+...|+       +|.+++..+.   +.+|+. |+-     +|.+++...+  .....-..+--+.+-+-|| .|+
T Consensus        82 l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~-----~~~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa-~gL  148 (223)
T COG2102          82 LRRLKVDGIV-------AGAIASEYQKERVERLCEELGLK-----VYAPLWGRDPEELLEEMVEAGFEAIIVAVSA-EGL  148 (223)
T ss_pred             HHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCE-----EeecccCCCHHHHHHHHHHcCCeEEEEEEec-cCC
Confidence            8765666787       7999887664   556766 774     3555553222  1111112222244444555 455


Q ss_pred             cCccccccccCHHHHHHHHHhcCCCCCcHH
Q 014492          288 AGLRVGYGAFPLSIIEYLWRAKQPYNVSVA  317 (423)
Q Consensus       288 ~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~  317 (423)
                      +..=+|.- .+.+.++.+......|++++.
T Consensus       149 ~~~~lGr~-i~~~~~e~l~~l~~~ygi~~~  177 (223)
T COG2102         149 DESWLGRR-IDREFLEELKSLNRRYGIHPA  177 (223)
T ss_pred             ChHHhCCc-cCHHHHHHHHHHHHhcCCCcc
Confidence            54334433 367788888777666665543

>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []

Probab=84.03  E-value=0.41  Score=21.22  Aligned_cols=10  Identities=50%  Similarity=0.610  Sum_probs=8.0

Q ss_pred             ccccccCCCC
Q 014492           12 LCLLKSNFSS   21 (423)
Q Consensus        12 ~~~~~~~~~~   21 (423)
                      |||.|+.+-|
T Consensus         3 l~wqksihgs   12 (12)
T PF08247_consen    3 LCWQKSIHGS   12 (12)
T ss_pred             eeEeeeecCC
Confidence            7999998753

The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	423
1gew_A	356	Crystal Structure Of Histidinol-Phosphate Aminotran		4e-35
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		3e-34
1fg3_A	356	Crystal Structure Of L-Histidinol Phosphate Aminotr		7e-34
3get_A	365	Crystal Structure Of Putative Histidinol-Phosphate		3e-31
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		2e-30
3hdo_A	360	Crystal Structure Of A Histidinol-Phosphate Aminotr		1e-27
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		2e-26
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		2e-26
1uu1_A	335	Complex Of Histidinol-Phosphate Aminotransferase (H		3e-26
2f8j_A	347	Crystal Structure Of Histidinol-phosphate Aminotran		3e-26
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		8e-26
1h1c_A	335	Histidinol-Phosphate Aminotransferase (Hisc) From T		2e-23
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		2e-22
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		1e-17
3p1t_A	337	Crystal Structure Of A Putative Aminotransferase (B		1e-14
3ly1_A	354	Crystal Structure Of Putative Histidinol-Phosphate		3e-13
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		5e-13
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		5e-13
3fkd_A	350	The Crystal Structure Of L-Threonine-O-3-Phosphate		7e-12
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		3e-11
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		2e-10
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		3e-10
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		7e-10
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		8e-10
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		9e-10
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		9e-10
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		1e-09
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		4e-09
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		2e-08
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		2e-08
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		3e-08
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		7e-08
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		2e-07
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		8e-07
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		9e-07
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		9e-07
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		1e-06
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		2e-06
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		2e-06
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		2e-06
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		2e-06
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		6e-06
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		7e-06
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		1e-05
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		1e-05
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		1e-05
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		2e-05
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		3e-05
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		4e-05
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		1e-04
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		1e-04
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		3e-04
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		4e-04
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		9e-04

>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase Complexed With Pyridoxal 5'-Phosphate Length = 356

Iteration: 1
 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 179/367 (48%), Gaps = 27/367 (7%)
Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           +T     R ++R L PYQ        + +LG   +  V ++ANE P      V   L Q 
Sbjct: 4   VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
                YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT
Sbjct: 51  TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           + MY   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D
Sbjct: 110 YGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+  
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPYNXXXXXXXXXXXXL--QNPIYLEKVKEALIKERERLFKLLKDVP 354
               +I  L +   PY             L  Q  + + +    +I ERE L   LK++P
Sbjct: 228 ANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIP 287
Query: 355 FLNP-YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK-ELKGYVRVSVGKPEHT 412
            +   + S +N+IL    +              G+++R  N +  L G +R++VG  E +
Sbjct: 288 CVEQVFDSETNYILARFKAS---SAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREES 344
Query: 413 DALMECL 419
             +++ L
Sbjct: 345 QRVIDAL 351

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 169/364 (46%), Gaps = 17/364 (4%)
Query: 68  RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-IY 126
           +  L  L  Y+P    E +  +LG     I K+ +NENP G   +V            IY
Sbjct: 7   KKSLAGLSSYKPGKREEEVXAELGLTK--ITKLSSNENPLGTSKKVAAIQANSSVETEIY 64
Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           PD  +  LR  +A    LE + ++   G DELI+L+ R +LD     V   PTF  Y  +
Sbjct: 65  PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQN 124
Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE- 245
           A + GA V ++P   D   ++E   +A++ EK   +++ +PNNP G+ I   D+   L+ 
Sbjct: 125 ALIEGAEVREIPLLQDGEHDLEGXLNAID-EKTTIVWICNPNNPTGNYIELADIQAFLDR 183
Query: 246 --MPILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
               +LVVLDEAY E+     E   + V+ + NLI+ RTFSK  GLA  RVGYG     I
Sbjct: 184 VPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI 243
Query: 302 IEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVKEA---LIKERERLFKLLKDVPFLNP 358
           I  L   + P+N            +++  ++ + + +    IK+ E   K  + V     
Sbjct: 244 IRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKL--- 300
Query: 359 YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418
           YP+  NF+L ++  G+            G + R          VR+++GK E   A++  
Sbjct: 301 YPANGNFVLIDL--GIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIAL 358
Query: 419 LMHL 422
           L  L
Sbjct: 359 LEKL 362

>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate Aminotransferase Complexed With L-Histidinol Length = 356

Iteration: 1
 Score =  141 bits (356), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 27/367 (7%)
Query: 61  LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
           +T     R ++R L PYQ        + +LG   +  V ++ANE P      V   L Q 
Sbjct: 4   VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
                YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT
Sbjct: 51  TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           +  Y   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D
Sbjct: 110 YGXYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+  
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPYNXXXXXXXXXXXXL--QNPIYLEKVKEALIKERERLFKLLKDVP 354
               +I  L +   PY             L  Q  +   +    +I ERE L   LK++P
Sbjct: 228 ANEEVINLLXKVIAPYPLSTPVADIAAQALSPQGIVAXRERVAQIIAEREYLIAALKEIP 287
Query: 355 FLNP-YPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK-ELKGYVRVSVGKPEHT 412
            +   + S +N+IL    +              G+++R  N +  L G +R++VG  E +
Sbjct: 288 CVEQVFDSETNYILARFKAS---SAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREES 344
Query: 413 DALMECL 419
             +++ L
Sbjct: 345 QRVIDAL 351

>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Np_281508.1) From Campylobacter Jejuni At 2.01 A Resolution Length = 365

Iteration: 1
 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 150/308 (48%), Gaps = 18/308 (5%)
Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
           L  L  Y+P    EV++ + G K  +++K+ +NENP+G PP+  E L Q     ++YPD 
Sbjct: 8   LNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNENPFGTPPKAIECLRQNANKAHLYPDD 65
Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
               L++ LA+   +++++I++G G+D++I+  +   L+  +  +    TF  YE  A  
Sbjct: 66  SXIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 190 NGAAVVKVPRKSDFSLNVELIADAVEREKP--KCIFLTSPNNPDGSIINDED---LLKIL 244
            GA   K  +    + N++      E  K   K IFL  PNNP G  ++  +    +K +
Sbjct: 126 CGA---KCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV 182
Query: 245 EMPILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
               LVV+D AY EF+  +         E +K+ DN++ L TFS   GL GLR+GYG   
Sbjct: 183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGIAN 242
Query: 299 LSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNP 358
            +II   ++ + P+N              +  + EK  E    + E L+K       +  
Sbjct: 243 ANIISAFYKLRAPFNVSNLALKAAVAAXDDDEFTEKTLENNFSQXE-LYKEFAKKHNIKI 301
Query: 359 YPSYSNFI 366
             SY+NFI
Sbjct: 302 IDSYTNFI 309

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 153/336 (45%), Gaps = 19/336 (5%)
Query: 97  IVKIDANENPYGPPPEVREAL----GQLKFPYIYPDPESRRLRAALAKDSGLESD-HILV 151
           +VK+DA ENPY  PP +R  L    G++     YP P S  LRA L +   + +   +L+
Sbjct: 32  LVKLDAXENPYRLPPALRSELAARLGEVALNR-YPVPSSEALRAKLKEVXQVPAGXEVLL 90
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G G+DE+I  +      PG K+    P F  Y   A   G   V VP ++DF+L+     
Sbjct: 91  GNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDRGAXL 150
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP------ILVVLDEAYTEFSGLESR 265
            A    +P  ++L  PNNP G++ +  D   I+          LVV+DEAY  F+  ES 
Sbjct: 151 AAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESW 209
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXX 325
              +    NL+V RT SK  GLAG+R+GY A     +E L + + PYN            
Sbjct: 210 XSRLTDFGNLLVXRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRPPYNVNVLTEATALFA 268
Query: 326 LQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXX 385
           L++   L++    L  ER R+ +       +  +PS +NF+L  V               
Sbjct: 269 LEHVAVLDEQAAQLRAERSRVAEGXAAHGGVTVFPSAANFLLARVPDAAQTFDRLLARK- 327
Query: 386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 419
             V+I++ +     L   +RV+V  PE     +E  
Sbjct: 328 --VLIKNVSKXHPLLANCLRVTVSTPEENAQFLEAF 361

>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate Aminotransferase From Geobacter Metallireducens Length = 360

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 160/349 (45%), Gaps = 33/349 (9%)
Query: 91  GRKPEDI---VKIDANENPYGPPPEVREALGQLKFP-----YIYPDPESRRLRAALAKDS 142
           G +P DI   +K++ NENPY P PEV +A+ +   P      IYP   S++LR    +  
Sbjct: 19  GYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELY 78
Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
           G +   I+   G+DE+++ ++R     G++I    P+++ Y   A V GA V       D
Sbjct: 79  GFDPSWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD 138
Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-MPILVVLDEAYTEFSG 261
           F      IA   ER + K  FLT+PN P G     E + ++       +VLDE Y EF+ 
Sbjct: 139 FR-----IAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGXLVLDETYAEFAE 193
Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXX 321
             + +E V++H+N++V RT SK   LAG R+G       +I  L + +  YN        
Sbjct: 194 -SNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPEVIAALDKIRDHYNLDRLAQAA 252
Query: 322 XXXXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC--------EVTSG 373
               L++  YL +    + + RE     L+ + + +  PS  N++           V  G
Sbjct: 253 CVAALRDQAYLSECCRRIRETREWFTTELRSIGY-DVIPSQGNYLFATPPDRDGKRVYDG 311
Query: 374 MXXXXXXXXXXXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL 422
           +             V++RH+++  L    R+S+G  E  +  +  L  +
Sbjct: 312 LYARK---------VLVRHFSDPLLAHGXRISIGTREEXEQTLAALKEI 351

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 21/335 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGLE-- 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 33  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 92  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXX 323
               ++K+   L+V RT SK    AG R+GY     + I+ +   + PY+          
Sbjct: 212 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAI 271
Query: 324 XXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXX 383
             L++        E L  ER R+   L+++ +    PS SNF+     S           
Sbjct: 272 VALRHSADTLGTVEKLSVERVRVAARLEELGYA-VVPSESNFVFFGDFSDQHAAWQAFLD 330
Query: 384 XXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418
              GV+IR      + G++R ++G PE  DA ++ 
Sbjct: 331 R--GVLIRDVG---IAGHLRTTIGVPEENDAFLDA 360

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 21/335 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGLE-- 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 30  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 88
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 89  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 148
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 149 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 208
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXX 323
               ++K+   L+V RT SK    AG R+GY     + I+ +   + PY+          
Sbjct: 209 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAI 268
Query: 324 XXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXX 383
             L++        E L  ER R+   L+++ +    PS SNF+     S           
Sbjct: 269 VALRHSADTLGTVEKLSVERVRVAARLEELGYA-VVPSESNFVFFGDFSDQHAAWQAFLD 327
Query: 384 XXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418
              GV+IR      + G++R ++G PE  DA ++ 
Sbjct: 328 R--GVLIRDVG---IAGHLRTTIGVPEENDAFLDA 357

>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima (Apo-Form) Length = 335

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 27  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +        V  
Sbjct: 87  EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 136
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVK 336
           V+RTFSK   LA  RVGY       I+   R + P+N            L +    E+  
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERT 255
Query: 337 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK 396
           + +++ERER+   L+++ +     S  NF+                     V +R +   
Sbjct: 256 KFIVEERERMKSALREMGY-RITDSRGNFVFV-FMEKEEKERLLEHLRTKNVAVRSFREG 313
Query: 397 ELKGYVRVSVGKPEHTDALMECL 419
                VR+++GK E  D ++  L
Sbjct: 314 -----VRITIGKREENDMILREL 331

>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase (ec 2.6.1.9) (imidazole Acetol-phosphate Transferase) (tm1040) From Thermotoga Maritima At 2.40 A Resolution Length = 347

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 39  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 98
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I ++M       D+ V  PPT++ Y   A   GA  ++VP   D  +        V  
Sbjct: 99  EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 148
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            +   +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 149 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 207
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVK 336
           V+RTFSK   LA  RVGY       I+   R + P+N            L +    E+  
Sbjct: 208 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERT 267
Query: 337 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNK 396
           + +++ERER+   L+++ +     S  NF+                     V +R +   
Sbjct: 268 KFIVEERERMKSALREMGY-RITDSRGNFVFV-FMEKEEKERLLEHLRTKNVAVRSFREG 325
Query: 397 ELKGYVRVSVGKPEHTDALMECL 419
                VR+++GK E  D ++  L
Sbjct: 326 -----VRITIGKREENDMILREL 343

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score =  114 bits (286), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 161/335 (48%), Gaps = 21/335 (6%)
Query: 98  VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGLE-- 145
           ++++ NENPY PP E   A        I      YP+ ++  LR  LA    K +G+   
Sbjct: 33  IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
            D++    G++E++  +++    PG   +   P+++M+   A       + V R +DF +
Sbjct: 92  RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
           ++++  + +  ++P  +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS   S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXX 323
               ++K+   L+V RT S     AG R+GY     + I+ +   + PY+          
Sbjct: 212 ATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAI 271
Query: 324 XXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXX 383
             L++        E L  ER R+   L+++ +    PS SNF+     S           
Sbjct: 272 VALRHSADTLGTVEKLSVERVRVAARLEELGYA-VVPSESNFVFFGDFSDQHAAWQAFLD 330
Query: 384 XXMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418
              GV+IR      + G++R ++G PE  DA ++ 
Sbjct: 331 R--GVLIRDVG---IAGHLRTTIGVPEENDAFLDA 360

>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From Thermotoga Maritima Length = 335

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 17/256 (6%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           NENP+  P ++ + + +      L+  Y  PD E      +      L  +++ VG GAD
Sbjct: 27  NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E+I +         D+ V  PPT++ Y   A   GA  ++VP   D  +    + +    
Sbjct: 87  EIIYVXXLXF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEG--- 139
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
                +F+ +PNNP G +   E++ +IL+    V LDEAY EF G ES ++++KK++NL 
Sbjct: 140 ---DVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVK 336
           V+RTFSK   LA  RVGY       I+   R + P+N            L +    E+  
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQXFAKVALDHREIFEERT 255
Query: 337 EALIKERERLFKLLKD 352
           + +++ERER    L++
Sbjct: 256 KFIVEERERXKSALRE 271

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 142/289 (49%), Gaps = 15/289 (5%)
Query: 93  KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILV 151
           K  +++   +N NP G P      + + +K   +YPD   RRL  ++     L+   I++
Sbjct: 24  KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVL 83
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
           G GA E+I+L +       +KI+   P++  YE +A  +G +VV      +  ++ E I 
Sbjct: 84  GNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDII 139
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSG--LESR 265
             +  +    + + +PNNP+G +IN E  + +L    E    +++DEA+ EF+G    S 
Sbjct: 140 SKI--DDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSF 197
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNXXXXXXXXXXX 324
           +  +K +  L ++R  +K   + G+R GYG      I    +AKQ P+N           
Sbjct: 198 VGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN 257
Query: 325 XLQNPIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTS 372
            L++  Y+E+    + KER+R  + L  + F+   +  ++NF+LC + +
Sbjct: 258 CLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN 306

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 90  LGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
           LG  P+ ++   AN NP G P  V+ AL   L     YPD +   L  ALA+   + +  
Sbjct: 19  LGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASW 78
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNV 207
           IL G G  E I   +   L P   ++   P F  Y    A +G  + +   R++D     
Sbjct: 79  ILAGNGETESI-FTVASGLKPRRAMI-VTPGFAEYGRALAQSGCEIRRWSLREADGWQLT 136
Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTEFSGL 262
           + I +A+  +   C+FL +PNNP G ++ +  LL+ +      + I ++LDEA+ +F   
Sbjct: 137 DAILEALTPDL-DCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPH 194
Query: 263 ESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPYNXXXXXXX 320
           E+  +  +K + ++ VLR+ +K   + GLR+GY      + +  + R + P++       
Sbjct: 195 ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAAL 254
Query: 321 XXXXXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFIL--CE 369
                LQ+  + +     L +E  R ++ L  +P L  YP  +N++L  CE
Sbjct: 255 AGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCE 305

>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase (Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60 A Resolution Length = 337

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 20/333 (6%)
Query: 92  RKPEDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLES 146
           R     V +  NENP    P V+ A+        ++P+   D E R  R  LA+      
Sbjct: 13  RAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPF---DAEPRVXRK-LAEHFSCPE 68
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           D++ +  G DE  D I         + V   P F  Y    AV+G    ++    D  L+
Sbjct: 69  DNLXLVRGIDECFDRI--SAEFSSXRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLD 126
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRM 266
              +A      +  C+ L +P+NP G  ++  +L ++ +    +++DE Y ++S   +R 
Sbjct: 127 PNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRAR- 182
Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXL 326
             +   +N +V R+FSK  GLAGLR+G    P  +I    R +   N            L
Sbjct: 183 -GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAXKRKQWFCNVGTLDLHALEAAL 241
Query: 327 QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMXXXXXXXXXXXM 386
            N    E      + +R R+   L+ + +     S +NF+L E  +G             
Sbjct: 242 DNDRAREAHIAKTLAQRRRVADALRGLGY-RVASSEANFVLVENAAG---ERTLRFLRER 297
Query: 387 GVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           G+ ++      L  ++R+S+G+ E  D L+  L
Sbjct: 298 GIQVKDAGQFGLHHHIRISIGREEDNDRLLAAL 330

>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate Aminotransferase (Yp_050345.1) From Erwinia Carotovora Atroseptica Scri1043 At 1.80 A Resolution Length = 354

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 21/326 (6%)
Query: 98  VKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
           ++I+ NENP G  P+ + A    +     Y   E   L   LA    +E+  IL+  G+ 
Sbjct: 19  IRINFNENPLGXSPKAQAAARDAVVKANRYAKNEILXLGNKLAAHHQVEAPSILLTAGSS 78
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
           E I   +        ++V    T+   E  A + G  V KV    +++ ++E +  AV  
Sbjct: 79  EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKXLDNWAFDIEGLKAAVAA 138
Query: 217 -EKPKCIFLTSPNNPDGSIINDEDLLK--ILEMP--ILVVLDEAYTEFSGLESRMEWV-- 269
              P  ++L +PNNP G+I    D+++  I   P     ++DEAY EF   + R   +  
Sbjct: 139 YSGPSIVYLVNPNNPTGTI-TPADVIEPWIASKPANTXFIVDEAYAEFVN-DPRFRSISP 196
Query: 270 ---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXXXXXXL 326
              +  +N+I+L+TFSK    AG RVGY     ++I    R                   
Sbjct: 197 XITQGAENIILLKTFSKIHAXAGXRVGYAVAHPTVIALXGRYVAGEKINFSGVDAALASX 256
Query: 327 QNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSGMXXXXXXXXXXX 385
            +  ++   K++    R+ L K L+D+    PY PS  NF+  ++   +           
Sbjct: 257 NDSAFITYSKKSNDVSRQILLKALEDLKL--PYLPSEGNFVFHQLV--VPLKDYQTHXAD 312
Query: 386 MGVMI-RHYNNKELKGYVRVSVGKPE 410
            GV+I R +   +   + R+S+G P+
Sbjct: 313 AGVLIGRAFPPAD--NWCRISLGTPQ 336

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84  EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
           ++  I  G K  D++ +   E  +  P  ++E   +       +  P+     LR A+A 
Sbjct: 16  KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 73
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
              K +G+E+D    I+V  GA++   + +   L  G++++   P F  Y     + G  
Sbjct: 74  KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 133
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
            V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I    +E  
Sbjct: 134 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++V+ DE Y  F   ++R   +   D +    I +  FSK   + G R+G+ A P  IIE
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 252
Query: 304 YLWRAKQPYN 313
            + +  Q YN
Sbjct: 253 RMVKF-QMYN 261

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84  EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
           ++  I  G K  D++ +   E  +  P  ++E   +       +  P+     LR A+A 
Sbjct: 17  KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 74
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
              K +G+E+D    I+V  GA++   + +   L  G++++   P F  Y     + G  
Sbjct: 75  KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 134
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
            V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I    +E  
Sbjct: 135 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++V+ DE Y  F   ++R   +   D +    I +  FSK   + G R+G+ A P  IIE
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 253
Query: 304 YLWRAKQPYN 313
            + +  Q YN
Sbjct: 254 RMVKF-QMYN 262

>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Porphyromonas Gingivalis Length = 350

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 19/301 (6%)
Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YP+P++  LR  LAK + ++++ ILV  G       I +     G + +   P+F  YE 
Sbjct: 47  YPEPDAGTLRQXLAKRNSVDNNAILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYED 104
Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL- 244
                   V   P   D       I +A       C +L +PNNPDG ++   ++L++L 
Sbjct: 105 ACRXYEHEVCFYPSNED-------IGEADFSNXDFC-WLCNPNNPDGRLLQRTEILRLLN 156
Query: 245 EMP-ILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           + P    VLD++Y  F+  E  R   +K   NL+ + +FS   G+ GLR+GY        
Sbjct: 157 DHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVXVYSFSHAYGIPGLRIGYIVANKDFX 216
Query: 303 EYLWRAKQPYNXXXXXXXXXXXXLQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY 362
           + +     P+             L +P           +        L  +  +  +PS 
Sbjct: 217 KRVAAFSTPWAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSG 276
Query: 363 SNFILCEVTSGMXXXXXXXXXXXMGVMIRHYNNKELKG----YVRVSVGKPEHTDALMEC 418
           + F L  +  G               +IR  +N   +G    YVR++  +P      ++ 
Sbjct: 277 TTFFLLRLKKGTAAELKKYXLEEYNXLIRDASN--FRGLDESYVRITTQRPAQNQLFIKA 334
Query: 419 L 419
           L
Sbjct: 335 L 335

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 19/237 (8%)
Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPY-GPPPEVREALGQLKFPYI-YPDPES-R 132
           P    +  +  +  L +K ED++ + A E  +  P P V EA+  L+   + Y DP    
Sbjct: 22  PISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIY 81
Query: 133 RLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY--E 184
            LR  +AK  G      +  D ++V  GA + +      +LDPGD+++   P +  Y  +
Sbjct: 82  ELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQ 141
Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
              A     VV+     +F  ++E + + +   K K + + SPNNP G +   E L  ++
Sbjct: 142 IILAGGTVNVVETFMSKNFQPSLEEV-EGLLVGKTKAVLINSPNNPTGVVYRREFLEGLV 200
Query: 245 EMP----ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
            +       ++ DE Y          S ++  +  D ++ +  FSK   + G RVGY
Sbjct: 201 RLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY 257

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 141/333 (42%), Gaps = 33/333 (9%)
Query: 67  IRSHLRKLKPYQPILPFEV--LSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P  P  V   +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNXX--XXXXXXXXXXLQNP----IYLEKVKEA 338
             + G R+GY   P  +I+ +    +                 L N      ++E  +EA
Sbjct: 236 FAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 339 LIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 371
             + R+ L + L  +      PS + ++L + +
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 141/333 (42%), Gaps = 33/333 (9%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P  ++     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPDAVVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNXX--XXXXXXXXXXLQNP----IYLEKVKEA 338
             + G R+GY   P  +I+ +    +                 L N      ++E  +EA
Sbjct: 236 FAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 339 LIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 371
             + R+ L + L  +      PS + ++L + +
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 33/333 (9%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYLW--RAKQPYNXXXXXXXXXXXXLQNP----IYLEKVKEA 338
             + G R+GY   P  +I+ +    ++   +            L N      ++E  +EA
Sbjct: 236 FAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 339 LIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 371
             + R+ L + L  +      PS + ++L + +
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 33/333 (9%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNXX--XXXXXXXXXXLQNP----IYLEKVKEA 338
             + G R+GY   P  +I+ +    +                 L N      ++E  +EA
Sbjct: 236 FAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 339 LIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 371
             + R+ L + L  +      PS + ++L + +
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 135 RAALAK------DSGLESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDA 187
           RAA+A+       +   +D++    GA   + +  R +  D  D+ +   P F  Y+   
Sbjct: 82  RAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFV 141
Query: 188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
              GA +V+VP  ++ F ++ + + + +     + + + SPNNP G++ ++E + K+ ++
Sbjct: 142 NAAGARLVEVPADTEHFQIDFDALEERINAHT-RGVIINSPNNPSGTVYSEETIKKLSDL 200
Query: 247 ----------PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGY 294
                     PI ++ DE Y E      ++ +V K +DN +V  ++SK   L G R+GY
Sbjct: 201 LEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGY 259

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 33/333 (9%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +K 
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYLW--RAKQPYNXXXXXXXXXXXXLQNP----IYLEKVKEA 338
             + G R+GY   P  +I+ +    ++   +            L N      ++E  +EA
Sbjct: 236 FAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 339 LIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 371
             + R+ L + L  +      PS + ++L + +
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 106 PYGPPP-----EVREALG---QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
           P  PPP      VR ALG   Q   P   P      LR ALA++  +E + ++V  GA E
Sbjct: 35  PSNPPPPFLLEAVRRALGRQDQYAPPAGLPA-----LREALAEEFAVEPESVVVTSGATE 89
Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADAV 214
            + ++++ ++ PGD++V   P F +Y  DA + GA    V        F L++  +  A+
Sbjct: 90  ALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL 149
Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE-FSGLESRMEWV 269
              + + + L +P NP G +  + +L  I  +     + ++ DE Y E + G   R    
Sbjct: 150 T-PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLRE 208
Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGY 294
              +    + +  KR    G RVG+
Sbjct: 209 FAPERTFTVGSAGKRLEATGYRVGW 233

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 33/333 (9%)
Query: 67  IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
           +R   R+++  +P   +     +++L R+  D+V + A E  +  P  V+EA    L Q 
Sbjct: 1   MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDK 172
           K  Y  P   PE   LR ALA    +++GL    +  +V  G  + +  + + +LDPGD+
Sbjct: 61  KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
           ++   P +  Y       G  VV+V    +  F  + E +  A+   + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
            G++   E L  +  + +     +V DE Y    + G       V     L V    +  
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAXA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYLW--RAKQPYNXXXXXXXXXXXXLQNP----IYLEKVKEA 338
             + G R+GY   P  +I+ +    ++   +            L N      ++E  +EA
Sbjct: 236 FAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 339 LIKERERLFKLLKDVPFLNPYPSYSNFILCEVT 371
             + R+ L + L  +      PS + ++L + +
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTS 328

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 16/234 (6%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSL 205
           +LV  GA E I   +  +++PG +++   P +  Y    A+ GA  V VP   D   F+L
Sbjct: 89  VLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFAL 148
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG 261
           + + +  AV   + + + + SP+NP G++++  +L  I E+     ++V+ DE Y     
Sbjct: 149 DADALRRAVT-PRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 262 LESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXX 317
             +R   +   D +    I + + +      G ++G+   P  +I  +  AKQ  +    
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGG 267
Query: 318 XXXXXXXXL---QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC 368
                   L       ++  ++ +L   R+RL   L ++ F   + SY  + LC
Sbjct: 268 APFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAV-HDSYGTYFLC 320

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 96  DIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAALA----KDSGL--E 145
           D+    A E  +  P  + EA    L Q K  Y  P     RLR A+A    +D+GL   
Sbjct: 31  DVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRY-GPAAGEPRLREAIAQKLQRDNGLCYG 89
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFDAAVNGAAVV-KVPRKSDF 203
           +D+ILV  G  + I  +M  +++PGD+++   P +  Y E      G  V+     ++ F
Sbjct: 90  ADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQF 149
Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF 259
            ++ E I  A+   K K +   +P+NP G +   +++  I    +E  + V+ DE Y + 
Sbjct: 150 KVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI 208
Query: 260 -----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
                  L       + ++  +V   F+K   + G RVG+ A P+ +++
Sbjct: 209 LYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVK 257

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
           +++LV  G  E I      + +PGD+I+   P +  Y   A + G  ++ V R+ +    
Sbjct: 103 ENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRXEEGFA 162
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FS 260
           +    ++   E+ K I L++P NP G +   ++   ++E+     + +++DE Y+E  F 
Sbjct: 163 IPQNLESFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFR 222
Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           G E       + D ++V+ + S +    G RVG
Sbjct: 223 G-EFASALSIESDKVVVIDSVSXKFSACGARVG 254

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 134 LRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
           LRA +A+  G+  + +L+  G+ + +DL+ +  LD G  ++   P++        + G  
Sbjct: 79  LRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPR 138
Query: 194 VVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSII----NDEDLLKILEMPI 248
            + VP   +   +++ + + ++RE+P+ ++L  S  NP G +         L  ++E  +
Sbjct: 139 FLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGL 197
Query: 249 LVVLDEAYTEFSGLESRM----EWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           +VV D+AY E    E+R+    E  ++  +  +I L +FSK     GLRV +       +
Sbjct: 198 VVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEAL 256
Query: 303 EYLWRAKQ 310
           + L +AKQ
Sbjct: 257 QKLVQAKQ 264

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 30/328 (9%)
Query: 69  SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGP-PPEVREAL---GQLKFPY 124
           + + +L PY   +  E L +   R+ EDI+ +    NP GP PP + E L    Q +  +
Sbjct: 12  ARIDRLPPYVFNITAE-LKMAARRRGEDIIDLSMG-NPDGPTPPHIVEKLCTVAQREDTH 69
Query: 125 IYPDPES-RRLRAALAK------DSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDC 176
            Y       RLR A++       D  ++ +   +V  G+ E +  +M   LD GD I+  
Sbjct: 70  GYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVP 129
Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGS 233
            P++ ++ + A + GA V  VP         EL  +   RE   KP+ + L  P+NP   
Sbjct: 130 NPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNEL--ERAIRESIPKPRMMILGFPSNPTAQ 187
Query: 234 IINDEDLLKILEMP----ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRA 285
            +  +   +++ +     ++VV D AY +  + G +  S M+     D  +   T SK  
Sbjct: 188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY 247
Query: 286 GLAGLRVGYGAFPLSIIEYLWRAK--QPYNXXXXXXXXXXXXLQ-NPIYLEKVKEALIKE 342
            +AG R+G+      ++  L R K    Y             L+ +   +  +     + 
Sbjct: 248 NMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQR 307
Query: 343 RERLFKLLKDVPFLNPYPSYSNFILCEV 370
           R+ L K L++  ++   P  S ++  ++
Sbjct: 308 RDVLVKGLREAGWMVENPKASMYVWAKI 335

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 71  LRKLKPYQPILPFEVL--SIQLGRKPE--DIVKIDANENPYGPPPEVREALGQL-----K 121
           L++LKPY    PF  L  + Q    PE  + V +   E  +  P  + +AL        K
Sbjct: 6   LKQLKPY----PFARLHEAXQGISAPEGXEAVPLHIGEPKHPTPKVITDALTASLHELEK 61
Query: 122 FPYIYPDPESRRLRAALAKD--SGLESD---HILVGCGADELIDLIMRCVLDP---GDK- 172
           +P     PE R+  A   K    GL  D    IL   G+ E +   ++ VL+P   G K 
Sbjct: 62  YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 173 -IVDCPPTFTMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229
            IV   P + +YE    + G  +     P  S F+ +   I++ V + + K +F+ SPNN
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEIHFANCPAPS-FNPDWRSISEEVWK-RTKLVFVCSPNN 179
Query: 230 PDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSG------LESRMEWVKKHDNLIV 277
           P GS+++ +   ++ ++      ++  DE Y+E  F G      L++  +  +    L+ 
Sbjct: 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLX 239
Query: 278 LRTFSKRAGLAGLRVGYGA 296
             + S R+ + GLR G+ A
Sbjct: 240 FTSLSXRSNVPGLRSGFVA 258

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
           P    L   L K  G+  D+ I++  G+ + +DLI R  L+PGD +V   PT       F
Sbjct: 122 PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 181
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
             YE          +++P   D  + VE++ + ++  K +     +  T P   NP G  
Sbjct: 182 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 233
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
           +N++    +LE+      +VV D+ Y E  +SG  E +++ +     +I L TFSK    
Sbjct: 234 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 292
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
            G R+G+      II  +  AKQ
Sbjct: 293 PGFRIGWMVGDPGIIRKMEIAKQ 315

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 132 RRLRAALAKDS----GLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           + LR A+A+ +    G + D    I V  GA E +   +  ++  GD+++   P++  Y 
Sbjct: 70  QALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA 129
Query: 185 FDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
              A++G  V ++  +   F ++ +  A A+  E+ + + L +P+NP  ++    D   +
Sbjct: 130 PAIALSGGIVKRMALQPPHFRVDWQEFA-ALLSERTRLVILNTPHNPSATVWQQADFAAL 188
Query: 244 LEM----PILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYG 295
            +      I V+ DE Y   +  +     V  H  L    + + +F K   + G +VGY 
Sbjct: 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYC 248
Query: 296 AFPLSI 301
             P  I
Sbjct: 249 VAPAPI 254

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
           P    L   L K  G+  D+ I++  G+ + +DLI R  L+PGD +V   PT       F
Sbjct: 77  PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 136
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
             YE          +++P   D  + VE++ + ++  K +     +  T P   NP G  
Sbjct: 137 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 188
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
           +N++    +LE+      +VV D+ Y E  +SG  E +++ +     +I L TFSK    
Sbjct: 189 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 247
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
            G R+G+      II  +  AKQ
Sbjct: 248 PGFRIGWMVGDPGIIRKMEIAKQ 270

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSDFS 204
           D + V     E + LI   +LDPGD+I+   P++  Y       G   V  +   + D+ 
Sbjct: 102 DDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ 161
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAY--TE 258
            +++ I   +  ++ K I + +PNNP G++ + + L +IL    E  I V+ DE Y    
Sbjct: 162 PDIDDIRKKI-TDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMT 220
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
           + G       + K   +IV+   SK     G R+GY  F
Sbjct: 221 YEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYF 259

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 107 YGPPP-EVREALGQLKFPYIYPDPESR---RLRAALAK------DSGLESDHILVGCGAD 156
           Y PP   ++EA   L  P +     +R    L  +L K      ++ L+++++ V  GA+
Sbjct: 69  YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSDFS 204
           E I   +  +L+ GD+++   P F  Y  +  + G  VV VP            R  +++
Sbjct: 129 EGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE-- 258
           ++ E    A+   K K + + +P+NP G +   E+L  +    ++  ++++ DE Y    
Sbjct: 189 IDFEQFEKAI-TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLY 247
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLA--GLRVGY 294
           F+   +R+  +      + L   S     A  G R+G+
Sbjct: 248 FTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGW 285

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 83  FEVLSI-----QLGRKPEDIVKIDANENPYGPP-PEVREALGQLKFPYI-YPDP----ES 131
           FEV+ I     +L  + + ++ ++  E  +  P P V E +  LK     Y D     E 
Sbjct: 12  FEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILEL 71
Query: 132 RRLRAALAKD---SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
           R   + L KD   + +  D+I++  G+   +   +  ++D GD+++   P +  Y+    
Sbjct: 72  REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIR 131
Query: 189 VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI 248
             GA     P   DF+  VE + +A+  +K K I + SP+NP G +I+ E      E   
Sbjct: 132 FLGAK----PVFCDFT--VESLEEAL-SDKTKAIIINSPSNPLGEVIDREIYEFAYENIP 184
Query: 249 LVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305
            ++ DE Y          S +E+ +  +  I++  FS    + G R+GY      IIE +
Sbjct: 185 YIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDEIIEAI 244
Query: 306 WRAKQ 310
            + +Q
Sbjct: 245 LKLQQ 249

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 36/237 (15%)
Query: 109 PPPEV--REALGQLKFPYIYPDPES-------------RRLRAALAKDSGLES--DHILV 151
           P PE+  R  LG++    +  +P+S               L A L K   LE   ++I++
Sbjct: 44  PDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVI 103
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
             G    +DL+ R ++DPGD ++   P++  T+  F+    GA +  VP  +D  + V+L
Sbjct: 104 TIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQL--GAKIEGVPVDND-GMRVDL 160
Query: 210 IADAVER-----EKPKCIF-LTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF 259
           + + ++      +K K I+ + +  NP G  ++ E    +LE+     +L++ D AY   
Sbjct: 161 LEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM 220
Query: 260 SGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
                 +  +K  DN   +IV  T SK  G  G R+G+      I++ +   KQP +
Sbjct: 221 RYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPID 276

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV---KVPRK 200
           LE+  +++  G  + IDL +  + +PG  I+   P F++Y+  A   G  V     +P K
Sbjct: 116 LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEK 175
Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
           S + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ DE Y
Sbjct: 176 S-WEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233
Query: 257 TEFSGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
            +    + + E +        ++     +KR  + G R+G+
Sbjct: 234 GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGW 274

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
           +L + +I   P  ++  + L   +G++ + IL   GA     L++  +++PGD ++   P
Sbjct: 56  KLNYGWIEGSPAFKKSVSQLY--TGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 179 TF-TMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
           T+  +Y+   ++ GA V   ++  ++ +  ++E +   + R   K I + + NNP G++ 
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLI-RPTTKXICINNANNPTGAVX 171
Query: 236 ND---EDLLKIL-EMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291
           +    E+L++I  E+   ++ DE Y  FS L+     ++ +D  I + + S    L G+R
Sbjct: 172 DRTYLEELVEIASEVGAYILSDEVYRSFSELDVP-SIIEVYDKGIAVNSLSXTYSLPGIR 230
Query: 292 VGYGA 296
           +G+ A
Sbjct: 231 IGWVA 235

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 127 PDPESRRLRAALAKD---SGLESDHILVGCGADELIDLI-MRCVLDPGDKIVDCPPTFTM 182
           PD     LR  L++D     +++  I +  GA   +DL  +     P   +    P++  
Sbjct: 73  PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAK--VDLFRLLSFFGPNQTVAIQDPSYPA 130
Query: 183 YEFDAAVNGAA-VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
           Y   A + GA  ++ +P   + +   E   D         + L SPNNP G+++N + L 
Sbjct: 131 YLDIARLTGAKEIIALPCLQENAFFPEFPEDT----HIDILCLCSPNNPTGTVLNKDQLR 186
Query: 242 KI----LEMPILVVLDEAYTEF----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
            I    +E  IL++ D AY+ F    S  +S  E        I + +FSK  G AG+R+G
Sbjct: 187 AIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246
Query: 294 YGAFP 298
           +   P
Sbjct: 247 WTVIP 251

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 16/217 (7%)
Query: 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204
           + D + +  G    +  +  CV++PGD ++   P +T Y     +     V +  +    
Sbjct: 108 KEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHY 167
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSI----INDEDLLKILEMPILVVLDEAYTEFS 260
           L      D+   +K K I+LT PNNP GS     + DE + K       +V D AY  F 
Sbjct: 168 LPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF- 226
Query: 261 GLESRMEWVKKHDN----LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXX 316
           G +++   +   +N     I + + SK    +G RVG+       I+ L + +   N   
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTN--- 283
Query: 317 XXXXXXXXXLQN-PIYLEKVKEALIKERERLFKLLKD 352
                    LQ+  IY     +  ++E+  +FK  +D
Sbjct: 284 ---AGXFGALQDAAIYALNHYDDFLEEQSNVFKTRRD 317

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 40/220 (18%)
Query: 99  KIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158
           K  AN   Y   PE R+A+ +             R+R         + + +++  GA   
Sbjct: 74  KAIANFQDYHGLPEFRKAIAKF-----MEKTRGGRVR--------FDPERVVMAGGATGA 120
Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE- 217
            + I+ C+ DPGD  +   P +  +  D       V  +P   + S N ++ + AV+   
Sbjct: 121 NETIIFCLADPGDAFLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 218 --------KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYT-------E 258
                   K K + LT+P+NP G+ ++ + L  +L       I +V DE Y        +
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQ 239
Query: 259 FSGL-----ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           F  +     E  M +  K D + ++ + SK  GL G RVG
Sbjct: 240 FVSIAEILDEQEMTYCNK-DLVHIVYSLSKDMGLPGFRVG 278

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 131 SRRLRAALA----KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           ++ LR A+A    +D  ++S+ + V  GA   I   ++ +L     I    PTF  Y  D
Sbjct: 114 NKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAY-ID 171
Query: 187 AAVNGAAVVKVPRKSDFSLNV---------ELIADAVEREKPKCIFLTSPNNPDGSIIND 237
           ++V          K+    NV             D     +   IF  SPNNP G + + 
Sbjct: 172 SSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGYVASR 231
Query: 238 EDLLKILEMP----ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           + L ++++       +++ D AY  F       S  E     +  I + +FSK AG  G+
Sbjct: 232 KQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGV 291
Query: 291 RVGYGAFP 298
           R+G+   P
Sbjct: 292 RLGWSIIP 299

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---V 197
           ++ LE+  +++  G  + I+L +  + +PG  I+   P F++Y   A   G  V     +
Sbjct: 90  EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLL 149
Query: 198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLD 253
           P KS + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ D
Sbjct: 150 PEKS-WEIDLKQLESLID-EKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILAD 207
Query: 254 EAYTEFSGLESRME-WVKKHDNLIVLRT--FSKRAGLAGLRVGY 294
           E Y +    + + E       N+ +L     + R  + G R+G+
Sbjct: 208 EIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGW 251

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 48/265 (18%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
           ++ ILV  GA   +   ++ ++DPGD+++   P +  YE    + GA  V +P +S  + 
Sbjct: 85  NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
            ++  +     D  E E     K K I L +P+NP G +   ++L  I ++ +    L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV--KKHDNL------------IVLRTFSKRAGLAGLRVGYGAF 297
            DE Y          EW+    H ++            I + +  K   + G ++G+   
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQP--YNXXXXXXXXXXXXLQNPI--------YLEKVKEALIKERERLF 347
           P  +I++L   +Q   Y                 I        Y   + + L  +R+R+ 
Sbjct: 255 PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMV 314
Query: 348 KLLKDVPFLNPYPSYSNFILCEVTS 372
           +LL  V      P    FI+ +V+S
Sbjct: 315 RLLNSVGLKPIVPDGGYFIIADVSS 339

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 48/265 (18%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
           ++ ILV  GA   +   ++ ++DPGD+++   P +  YE    + GA  V +P +S  + 
Sbjct: 85  NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
            ++  +     D  E E     K K I L +P+NP G +   ++L  I ++ +    L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRA----------GLAGLRVGYGAF 297
            DE Y          EW+      H  +  L    +R            + G ++G+   
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQP--YNXXXXXXXXXXXXLQNPI--------YLEKVKEALIKERERLF 347
           P  +I++L   +Q   Y                 I        Y   + + L  +R+R+ 
Sbjct: 255 PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMV 314
Query: 348 KLLKDVPFLNPYPSYSNFILCEVTS 372
           +LL  V      P    FI+ +V+S
Sbjct: 315 RLLNSVGLKPIVPDGGYFIIADVSS 339

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 144 LESDHILVGCGADE-LIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVP--R 199
           L+ + ++   G+ E L +     + D  +  +  P P + +YE  A    A  +  P  +
Sbjct: 80  LKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLXPLTK 139
Query: 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEA 255
           ++DF+ ++    +  E ++   + L SPNNP G  ++ E+L+  +++ +    +++ DE 
Sbjct: 140 ENDFTPSL----NEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 256 YTEF-------SGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
           Y+E        S LE+  +   +   N++V+ + SKR+   GLR G+ A
Sbjct: 196 YSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA 244

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
           IF  SPNNP G+    E L +++E       ++V D AY  +   +   S  E     + 
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
                +FSK AG  G+R+G+   P  ++
Sbjct: 262 AXETASFSKYAGFTGVRLGWTVIPKKLL 289

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
           IF  SPNNP G+    E L +++E       ++V D AY  +   +   S  E     + 
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
            +   +FSK AG  G+R+G+   P  ++
Sbjct: 262 AMETASFSKYAGFTGVRLGWTVIPKKLL 289

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSL 205
           +H+++  GA    +  + C+ DPG+ ++   P +  ++ D     G  +V +   S    
Sbjct: 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF 171
Query: 206 NV------ELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254
            +      E   +A +R  + K + +T+P+NP G+ +   +L  +L       I ++ DE
Sbjct: 172 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDE 231
Query: 255 AY--TEFS--GLESRMEWVKKHD---------NLIVLRTFSKRAGLAGLRVG 293
            Y  T FS     S ME +K  +          + V+ + SK  GL G RVG
Sbjct: 232 IYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	423
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	1e-151
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	1e-146
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	1e-143
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	1e-142
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	1e-135
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	1e-135
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	1e-134
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	1e-134
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	1e-134
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	1e-131
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	1e-128
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	1e-116
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	4e-64
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	4e-37
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	7e-32
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	1e-30
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	2e-30
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	4e-29
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	1e-28
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	1e-28
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	2e-28
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	2e-28
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-28
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	3e-28
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	5e-28
3nra_A	407	Aspartate aminotransferase; structural genomics, j	2e-27
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	8e-27
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	5e-26
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	7e-26
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	1e-25
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	2e-25
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	2e-25
3ele_A	398	Amino transferase; RER070207001803, structural gen	3e-25
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	6e-25
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	1e-24
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	2e-24
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	3e-24
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	5e-24
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	5e-23
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	2e-22
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	3e-22
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	5e-21
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	2e-20
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	5e-20
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	1e-19
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	3e-19
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	3e-19
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	6e-19
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	8e-19
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	8e-19
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	9e-19
1vp4_A	425	Aminotransferase, putative; structural genomics, j	1e-18
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	1e-18
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	1e-18
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	2e-18
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	3e-18
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	2e-16
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	1e-15
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	1e-15
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	3e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	1e-07
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	6e-07
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	1e-06
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	3e-06
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	4e-06
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	7e-06
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	2e-05
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	8e-05

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score =  431 bits (1111), Expect = e-151
 Identities = 109/359 (30%), Positives = 176/359 (49%), Gaps = 11/359 (3%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
            +  L  L  Y+P    E +  +LG     I K+ +NENP G   +V            I
Sbjct: 6   WKKSLAGLSSYKPGKREEEVMAELGLT--KITKLSSNENPLGTSKKVAAIQANSSVETEI 63

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD  +  LR  +A    LE + ++   G DELI+L+ R +LD     V   PTF  Y  
Sbjct: 64  YPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQ 123

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
           +A + GA V ++P   D   ++E + +A+  EK   +++ +PNNP G+ I   D+   L+
Sbjct: 124 NALIEGAEVREIPLLQDGEHDLEGMLNAI-DEKTTIVWICNPNNPTGNYIELADIQAFLD 182

Query: 246 -MP--ILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300
            +P  +LVVLDEAY E+   +     + V+ + NLI+ RTFSK  GLA  RVGYG     
Sbjct: 183 RVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKE 242

Query: 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP 360
           II  L   + P+N +   +  A  A+++  ++ + + +     ++     K    +  YP
Sbjct: 243 IIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYP 302

Query: 361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           +  NF+L ++  G++A  +   L K G + R          VR+++GK E   A++  L
Sbjct: 303 ANGNFVLIDL--GIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALL 359

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score =  418 bits (1077), Expect = e-146
 Identities = 116/368 (31%), Positives = 178/368 (48%), Gaps = 29/368 (7%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--K 121
           +  IR  +R +  Y                   +VK+DA ENPY  PP +R  L     +
Sbjct: 11  ERIIRDDVRAMGAYHV------------PDSHGLVKLDAMENPYRLPPALRSELAARLGE 58

Query: 122 FPY-IYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
                YP P S  LRA L +   + +   +L+G G+DE+I ++      PG K++   P 
Sbjct: 59  VALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPG 118

Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
           F MY   A   G   V VP ++DF+L+   +  A+   +P  ++L  PNNP G++ +  D
Sbjct: 119 FVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAAD 178

Query: 240 LLKILE------MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
           +  I+          LVV+DEAY  F+  ES M  +    NL+V+RT SK  GLAG+R+G
Sbjct: 179 MEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESWMSRLTDFGNLLVMRTVSKL-GLAGIRLG 236

Query: 294 YGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353
           Y A     +E L + + PYNV+V  E  A  AL++   L++    L  ER R+ + +   
Sbjct: 237 YVAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH 296

Query: 354 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVGKPEH 411
             +  +PS +NF+L  V    DA +  D L    V+I++ +     L   +RV+V  PE 
Sbjct: 297 GGVTVFPSAANFLLARVP---DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEE 353

Query: 412 TDALMECL 419
               +E  
Sbjct: 354 NAQFLEAF 361

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score =  410 bits (1057), Expect = e-143
 Identities = 104/363 (28%), Positives = 181/363 (49%), Gaps = 16/363 (4%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI 125
               L  L  Y+P    EV++ + G K  +++K+ +NENP+G PP+  E L Q     ++
Sbjct: 4   FNEFLNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNENPFGTPPKAIECLRQNANKAHL 61

Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
           YPD     L++ LA+   +++++I++G G+D++I+  +   L+  +  +    TF MYE 
Sbjct: 62  YPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEI 121

Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
            A   GA   K    +      + + +   +++ K IFL  PNNP G  ++  +  + ++
Sbjct: 122 YAKQCGAKCYKTQSITHNLDEFKKLYETH-KDEIKLIFLCLPNNPLGECLDASEATEFIK 180

Query: 246 -MP--ILVVLDEAYTEFSGLE------SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
            +    LVV+D AY EF+  +         E +K+ DN++ L TFSK  GL GLR+GYG 
Sbjct: 181 GVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI 240

Query: 297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356
              +II   ++ + P+NVS  A  AA AA+ +  + EK  E    + E   +  K    +
Sbjct: 241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NI 299

Query: 357 NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM 416
               SY+NFI        ++  L + L K G++IR+  +  L   +R+++G     +   
Sbjct: 300 KIIDSYTNFITYFFD-EKNSTDLSEKLLKKGIIIRNLKSYGLN-AIRITIGTSYENEKFF 357

Query: 417 ECL 419
              
Sbjct: 358 TEF 360

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score =  408 bits (1051), Expect = e-142
 Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 31/366 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKP--EDIVKIDANENPYGPPPEVREALGQLK 121
               R ++R L PYQ             R+      V ++ANE P     ++ +      
Sbjct: 7   TDLARENVRNLTPYQS-----------ARRLGGNGDVWLNANEYPTAVEFQLTQQTLN-- 53

Query: 122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTF 180
               YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG D I+ CPPT+
Sbjct: 54  ---RYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY 110

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
            MY   A   G     VP   ++ L+++ I+D ++    K +++ SPNNP G +IN +D 
Sbjct: 111 GMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDF 168

Query: 241 LKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
             +LE+     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+   
Sbjct: 169 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 228

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPF 355
              +I  L +   PY +S      A  AL     + + +    +I ERE L   LK++P 
Sbjct: 229 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPC 288

Query: 356 LNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVGKPEHTD 413
           +   + S +N+IL        +  +   L   G+++R  N +  L G +R++VG  E + 
Sbjct: 289 VEQVFDSETNYILARFK---ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQ 345

Query: 414 ALMECL 419
            +++ L
Sbjct: 346 RVIDAL 351

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score =  390 bits (1005), Expect = e-135
 Identities = 99/361 (27%), Positives = 171/361 (47%), Gaps = 37/361 (10%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY 124
           + +    ++  PY+              +  D   +  NENP+  P ++ + + +     
Sbjct: 2   NPLDLIAKRAYPYET-------------EKRDKTYLALNENPFPFPEDLVDEVFRRLNSD 48

Query: 125 ---IYPDPESRRLRAALAK---DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
              IY D     L   +        L  +++ VG GADE+I ++M       D+ V  PP
Sbjct: 49  ALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLM----FDRSVFFPP 104

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           T++ Y   A   GA  ++VP   D  +        V   +   +F+ +PNNP G +   E
Sbjct: 105 TYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNVGEGDVVFIPNPNNPTGHVFERE 158

Query: 239 DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
           ++ +IL+    V LDEAY EF G ES ++++KK++NL V+RTFSK   LA  RVGY    
Sbjct: 159 EIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS 217

Query: 299 LSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP 358
              I+   R + P+NVS  +++ A  AL +    E+  + +++ERER+   L+++ +   
Sbjct: 218 EKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGY-RI 276

Query: 359 YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMEC 418
             S  NF+   +    + ++L + L    V +R +        VR+++GK E  D ++  
Sbjct: 277 TDSRGNFVFVFME-KEEKERLLEHLRTKNVAVRSFRE-----GVRITIGKREENDMILRE 330

Query: 419 L 419
           L
Sbjct: 331 L 331

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score =  391 bits (1006), Expect = e-135
 Identities = 88/340 (25%), Positives = 167/340 (49%), Gaps = 18/340 (5%)

Query: 91  GRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHI 149
             K  +++   +N NP G P      + + +K   +YPD   RRL  ++     L+   I
Sbjct: 22  VFKGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGI 81

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
           ++G GA E+I+L +       +KI+   P++  YE +A  +G +VV      +  ++ E 
Sbjct: 82  VLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYED 137

Query: 210 IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-- 263
           I   ++      + + +PNNP+G +IN E  + +L++       +++DEA+ EF+G    
Sbjct: 138 IISKID--DVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSS 195

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNVSVAAEVAA 322
           S +  +K +  L ++R  +K   + G+R GYG      I   +   + P+N++  AE+AA
Sbjct: 196 SFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAA 255

Query: 323 CAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKD 381
              L++  Y+E+    + KER+R  + L  + F+   +  ++NF+LC +   +  +KL D
Sbjct: 256 INCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLE-NISGEKLYD 314

Query: 382 DLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 419
            L K  ++IR   N       +VR ++   +     +  L
Sbjct: 315 SLLKEDIVIRRCCNFIGLDDSFVRFAIKDEKKNTKFLRAL 354

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score =  390 bits (1003), Expect = e-134
 Identities = 93/369 (25%), Positives = 170/369 (46%), Gaps = 31/369 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ---- 119
           D  +R  LR    Y               +    ++++ NENPY P   +   L      
Sbjct: 11  DLPLREELRGEHAYGA------------PQLNVDIRLNTNENPYPPSEALVADLVATVDK 58

Query: 120 -LKFPYIYPDPESRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDK 172
                  YP+ ++  LR  LA          +  D++    G++E++  +++    PG  
Sbjct: 59  IATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 118

Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232
            +   P+++M+   A       + V R +DF +++++  + +  ++P  +F+T+PNNP G
Sbjct: 119 ALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTG 178

Query: 233 SIINDEDLLKILE-MPILVVLDEAYTEFSGLESRMEWVKKH-DNLIVLRTFSKRAGLAGL 290
            + + +D+ +I+   P +V++DEAY EFS   S    ++K+   L+V RT SK    AG 
Sbjct: 179 DVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGG 238

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLL 350
           R+GY     + I+ +   + PY++S  ++ AA  AL++        E L  ER R+   L
Sbjct: 239 RLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARL 298

Query: 351 KDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE 410
           +++ +    PS SNF+        D           GV+IR      + G++R ++G PE
Sbjct: 299 EELGY-AVVPSESNFVFFGD--FSDQHAAWQAFLDRGVLIRDVG---IAGHLRTTIGVPE 352

Query: 411 HTDALMECL 419
             DA ++  
Sbjct: 353 ENDAFLDAA 361

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score =  388 bits (1000), Expect = e-134
 Identities = 103/362 (28%), Positives = 177/362 (48%), Gaps = 28/362 (7%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPED---IVKIDANENPYGPPPEVREALGQLKFP 123
           +R ++  +K Y P           G +P D    +K++ NENPY P PEV +A+ +   P
Sbjct: 6   LRQNIASMKGYIP-----------GYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGP 54

Query: 124 Y-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                 IYP   S++LR    +  G +   I++  G+DE+++ ++R     G++I    P
Sbjct: 55  DGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHP 114

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           +++ Y   A V GA V       DF +          R + K  FLT+PN P G     E
Sbjct: 115 SYSYYGTLAEVQGARVRTFGLTGDFRIAGFPE-----RYEGKVFFLTTPNAPLGPSFPLE 169

Query: 239 DLLKILE-MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
            + ++      ++VLDE Y EF+   + +E V++H+N++V RT SK   LAG+R+G    
Sbjct: 170 YIDELARRCAGMLVLDETYAEFAE-SNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIA 228

Query: 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN 357
              +I  L + +  YN+   A+ A  AAL++  YL +    + + RE     L+ + + +
Sbjct: 229 RPEVIAALDKIRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIGY-D 287

Query: 358 PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALME 417
             PS  N++        D K++ D L    V++RH+++  L   +R+S+G  E  +  + 
Sbjct: 288 VIPSQGNYLFATP-PDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIGTREEMEQTLA 346

Query: 418 CL 419
            L
Sbjct: 347 AL 348

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  388 bits (998), Expect = e-134
 Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 15/357 (4%)

Query: 73  KLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPES 131
            L            +  LG  P+ ++   AN NP G P  V+ AL   L     YPD + 
Sbjct: 2   ALFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADY 61

Query: 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG 191
             L  ALA+   + +  IL G G  E I  +   +     + +   P F  Y    A +G
Sbjct: 62  FHLHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSG 119

Query: 192 AAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----M 246
             + +   R++D     + I +A+      C+FL +PNNP G +     L  I +    +
Sbjct: 120 CEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSL 178

Query: 247 PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEY 304
            I ++LDEA+ +F       +  +K + ++ VLR+ +K   + GLR+GY      + +  
Sbjct: 179 NINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMAR 238

Query: 305 LWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN 364
           + R + P++V+  A +A   ALQ+  + +     L +E  R ++ L  +P L  YP  +N
Sbjct: 239 MRRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRAN 298

Query: 365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 419
           ++L       +   L+  L    ++IR   N       Y RV++      + L+  L
Sbjct: 299 YLLLRC--EREDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAAL 353

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score =  381 bits (982), Expect = e-131
 Identities = 77/336 (22%), Positives = 137/336 (40%), Gaps = 16/336 (4%)

Query: 90  LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDH 148
           +     +IV         G    + + L + L     YP+P++  LR  LAK + ++++ 
Sbjct: 10  ITPLSSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNA 69

Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
           ILV  G       I +     G + +   P+F  YE    +    V   P   D      
Sbjct: 70  ILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDI----- 122

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLE-SR 265
                 +       +L +PNNPDG ++   ++L++L        VLD++Y  F+  E  R
Sbjct: 123 ---GEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIR 179

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAA 325
              +K   NL+++ +FS   G+ GLR+GY       ++ +     P+ V+  A  AA   
Sbjct: 180 PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFI 239

Query: 326 LQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 385
           L +P           +        L  +  +  +PS + F L  +  G  A+  K  L +
Sbjct: 240 LIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVHPSGTTFFLLRLKKGTAAELKKYMLEE 299

Query: 386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECL 419
             ++IR  +N     + YVR++  +P      ++ L
Sbjct: 300 YNMLIRDASNFRGLDESYVRITTQRPAQNQLFIKAL 335

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score =  371 bits (956), Expect = e-128
 Identities = 84/340 (24%), Positives = 144/340 (42%), Gaps = 12/340 (3%)

Query: 81  LPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALA 139
           +          R     V +  NENP    P V+ A+         YP     R+   LA
Sbjct: 2   MSVGEAMDTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLA 61

Query: 140 KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199
           +      D++++  G DE  D I         + V   P F  Y    AV+G    ++  
Sbjct: 62  EHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL 119

Query: 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEF 259
             D  L+   +A      +  C+ L +P+NP G  ++  +L ++ +    +++DE Y ++
Sbjct: 120 TDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDY 176

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAE 319
           S   +R   +   +N +V R+FSK  GLAGLR+G    P  +I  + R +   NV     
Sbjct: 177 SSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDL 234

Query: 320 VAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL 379
            A  AAL N    E      + +R R+   L+ + +     S +NF+L E       ++ 
Sbjct: 235 HALEAALDNDRAREAHIAKTLAQRRRVADALRGLGY-RVASSEANFVLVENA---AGERT 290

Query: 380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
              L + G+ ++      L  ++R+S+G+ E  D L+  L
Sbjct: 291 LRFLRERGIQVKDAGQFGLHHHIRISIGREEDNDRLLAAL 330

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score =  343 bits (881), Expect = e-116
 Identities = 84/350 (24%), Positives = 155/350 (44%), Gaps = 15/350 (4%)

Query: 79  PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAA 137
              P            ++ ++I+ NENP G  P+ + A    +     Y   E   L   
Sbjct: 2   ETQPESAAFTAPS--TDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNK 59

Query: 138 LAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKV 197
           LA    +E+  IL+  G+ E I   +        ++V    T+   E  A + G  V KV
Sbjct: 60  LAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKV 119

Query: 198 PRKSDFSLNVELIADAV-EREKPKCIFLTSPNNPDGSIINDEDLLKILE-MP--ILVVLD 253
               +++ ++E +  AV     P  ++L +PNNP G+I   + +   +   P   + ++D
Sbjct: 120 KMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVD 179

Query: 254 EAYTEF---SGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
           EAY EF       S    + +  +N+I+L+TFSK   +AG+RVGY     ++I  + R  
Sbjct: 180 EAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYV 239

Query: 310 QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE 369
               ++ +   AA A++ +  ++   K++    R+ L K L+D+      PS  NF+  +
Sbjct: 240 AGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDLKL-PYLPSEGNFVFHQ 298

Query: 370 VTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           +   +  K  +  +A  GV+I          + R+S+G P+    + + +
Sbjct: 299 L--VVPLKDYQTHMADAGVLIGR-AFPPADNWCRISLGTPQEMQWVADTM 345

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  210 bits (535), Expect = 4e-64
 Identities = 64/331 (19%), Positives = 118/331 (35%), Gaps = 52/331 (15%)

Query: 126 YPDPESRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGD----KIVD 175
                   L  A+        ++  E  +I+VG G+ +L    +  +          +V 
Sbjct: 65  LCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVA 124

Query: 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
             P ++ Y  +     + + K           E  A   +++ P    +TSPNNPDG+I 
Sbjct: 125 AAPFYSTYVEETTYVRSGMYKW----------EGDAWGFDKKGPYIELVTSPNNPDGTI- 173

Query: 236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
            +  + +  +    V+ D AY             ++ D+ I+L TFSK  G AG R+G+ 
Sbjct: 174 RETVVNRPDDDEAKVIHDFAYYWPHYTP----ITRRQDHDIMLFTFSKITGHAGSRIGWA 229

Query: 296 AFPLSIIEYLWRAKQPYN---VSVAAEVAACAALQNPI-----------YLEKVKEALIK 341
                 +          N   VS  ++V     L               + +  +E +  
Sbjct: 230 LVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKN 289

Query: 342 ERERLFKLLKDVP---FLNPYPSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMI 390
             E+L +++K+           ++ N+    + S          +   L  +L +  VM 
Sbjct: 290 RWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMS 349

Query: 391 RHYNNKEL-KGYVRVSVGKPEHT-DALMECL 419
           R        K +VRVS+   E   +  +E L
Sbjct: 350 RAGERCGSDKKHVRVSMLSREDVFNVFLERL 380

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  138 bits (349), Expect = 4e-37
 Identities = 64/315 (20%), Positives = 134/315 (42%), Gaps = 25/315 (7%)

Query: 110 PPEVREAL------GQLKFPYIYPDPESRRLRAALA-KDSGLESDHILVGCGADELIDLI 162
                E         +L + +I   P     + +++   +G++ + IL   GA     L+
Sbjct: 41  SGTNPEDFYKKLQGTKLNYGWIEGSPA---FKKSVSQLYTGVKPEQILQTNGATGANLLV 97

Query: 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPK 220
           +  +++PGD ++   PT+          GA V       ++ +  ++E +   + R   K
Sbjct: 98  LYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI-RPTTK 156

Query: 221 CIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
            I + + NNP G++++   L +++E+       ++ DE Y  FS        ++ +D  I
Sbjct: 157 MICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE-LDVPSIIEVYDKGI 215

Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY---NVSVAAEVAACAALQNPI-YL 332
            + + SK   L G+R+G+ A    + + L   +  Y      V  ++ A  AL +    L
Sbjct: 216 AVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRD-YTMICAGVFDDLVAQLALAHYQEIL 274

Query: 333 EKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDL-AKMGVMI 390
           E+ +  L +    L + +++ P ++   P+  +    ++   M  +     L  + GV++
Sbjct: 275 ERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLL 334

Query: 391 RHYNNKELKGYVRVS 405
              N  E  GYVR+ 
Sbjct: 335 VPGNRFERDGYVRLG 349

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  123 bits (312), Expect = 7e-32
 Identities = 77/336 (22%), Positives = 135/336 (40%), Gaps = 46/336 (13%)

Query: 107 YGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164
             PPP + EA+ + L     Y P      LR ALA++  +E + ++V  GA E + ++++
Sbjct: 37  NPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQ 96

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADAVEREKPKC 221
            ++ PGD++V   P F +Y  DA + GA    V        F L++  +  A+   + + 
Sbjct: 97  SLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL-TPRTRA 155

Query: 222 IFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNL 275
           + L +P NP G +  + +L  I        + ++ DE Y E  +          +     
Sbjct: 156 LLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGE--------RPRRLR 207

Query: 276 IVL--RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA---AEVAACAA 325
                RT       KR    G RVG+   P   +  L   +Q +    A    +     A
Sbjct: 208 EFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQ-WTSFSAPTPLQAGVAEA 266

Query: 326 LQNP---IYLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAKKLK 380
           L+      + E ++E   + R+ L   L+ +      P  +Y  F++ E+  G DA +L 
Sbjct: 267 LKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTY--FLMAEL-PGWDAFRL- 322

Query: 381 DDLAKMGVMI----RHYNNKELKGYVRVSVGKPEHT 412
             + +  V +      Y     K   R +  K E  
Sbjct: 323 --VEEARVALIPASAFYLEDPPKDLFRFAFCKTEEE 356

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  119 bits (302), Expect = 1e-30
 Identities = 79/373 (21%), Positives = 146/373 (39%), Gaps = 48/373 (12%)

Query: 73  KLKPYQPILPFEVLS--IQLGRKPEDIVKIDANE-NPYGPPPE-VREALGQ-LKFPYIYP 127
             +PY    PFE L   ++     +    +D     P    P+ +++AL        IYP
Sbjct: 3   TFEPY----PFERLRALLKEITPKKRG--LDLGIGEPQFETPKFIQDALKNHTHSLNIYP 56

Query: 128 DPE-SRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLD--PGDKIVDCPP 178
                  LRAA            L+ + ++   G+ E++      VL       I    P
Sbjct: 57  KSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNP 116

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
            + +YE  A    A  + +P   +      L  +  E ++   + L SPNNP G  ++ E
Sbjct: 117 FYQIYEGAAKFIKAKSLLMPLTKENDFTPSL--NEKELQEVDLVILNSPNNPTGRTLSLE 174

Query: 239 DLLKILEM----PILVVLDEAYTEF-------SGLESRMEWVKK-HDNLIVLRTFSKRAG 286
           +L+  +++      +++ DE Y+E        S LE+ M    +   N++V+ + SKR+ 
Sbjct: 175 ELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSS 234

Query: 287 LAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERE 344
             GLR G+ A    ++E     +    Y  + A + A+ AA  +  + E  +       +
Sbjct: 235 APGLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLK 294

Query: 345 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-AKKLKDDLAKMGVMI---RHYNNKEL-K 399
              K+ K+         YS ++   V +G + AK L       G++     +     +  
Sbjct: 295 LARKIFKNTLI----YPYSFYVYLPVQNGENFAKTL---YQNEGIITLPALYLGRNRIGA 347

Query: 400 GYVRVSVGKPEHT 412
            YVR+++      
Sbjct: 348 DYVRLALVYDTPL 360

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  119 bits (302), Expect = 2e-30
 Identities = 62/349 (17%), Positives = 113/349 (32%), Gaps = 70/349 (20%)

Query: 80  ILPFEVLSI-----QLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPD 128
           + PF V+ +     +       I+ ++  +   G P    EAL        L     Y  
Sbjct: 11  VDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALG----YTV 66

Query: 129 ----PESRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
               P    LR  +A    +  G++     +++  G+     L    + D GD++    P
Sbjct: 67  ALGLPA---LRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAP 123

Query: 179 TFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
            +  Y       G   V +P   ++                    + + SP NP G++++
Sbjct: 124 GYPSYRQILRALGLVPVDLPTAPENRLQPVPA----DFAGLDLAGLMVASPANPTGTMLD 179

Query: 237 DEDLLKI----LEMPILVVLDEAY-------TEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
              +  +           + DE Y          + LE         D   V+ +FSK  
Sbjct: 180 HAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELT-------DECYVINSFSKYF 232

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQNPIYLEKVKEALIKER 343
            + G RVG+   P   +  + R  Q        A++VAA AAL     L+   +     R
Sbjct: 233 SMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANR 292

Query: 344 ERLFKLLKDVPFLNP---------YPSYSNFILCEVTSGMDAKKLKDDL 383
           + + + L    F            Y   S+          D++    ++
Sbjct: 293 KLMLERLPKAGFTRIAPPDGAFYVYADVSDL-------TDDSRAFAAEI 334

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  116 bits (292), Expect = 4e-29
 Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 50/343 (14%)

Query: 109 PPPEVREALGQ--LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGCGADEL 158
            P  ++E L     +    Y P    + LR A+A    +  G + D    I V  GA E 
Sbjct: 44  GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA 103

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVERE 217
           +   +  ++  GD+++   P++  Y    A++G  V ++  +   F ++ +  A  +  E
Sbjct: 104 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALL-SE 162

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKK 271
           + + + L +P+NP  ++    D   +        I V+ DE Y    FS         + 
Sbjct: 163 RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQ--------QG 214

Query: 272 HDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAE 319
           H +++       R      F K   + G +VGY   P  I   + +  Q   ++V+  A+
Sbjct: 215 HASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQ 274

Query: 320 VAACAALQNPI-YLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVT--SGM 374
           +A    L+    +   + +   ++R+ L   L +     L    +Y  F+L + +  S +
Sbjct: 275 LALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTY--FLLVDYSAVSTL 332

Query: 375 DAKKLKDDLAK-MGVMI----RHYNNKELKGYVRVSVGKPEHT 412
           D  +    L +  GV          +      +R+   K E T
Sbjct: 333 DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKEST 375

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  115 bits (291), Expect = 1e-28
 Identities = 51/353 (14%), Positives = 100/353 (28%), Gaps = 80/353 (22%)

Query: 94  PEDIVK-----IDANENPYGPP----PEVREALGQLKFPYIYPDPESRRLRAALAKDSGL 144
           P+  ++     +        P     PE+++               SR  +        +
Sbjct: 59  PQIGIETEIQKLREGVASIYPNLDGLPELKQEA-------------SRFAK----LFVNI 101

Query: 145 E--SDHILVGCGADELIDLIM----RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198
           +  +   +   G+ +   +      R   +     +   P F + +    + G       
Sbjct: 102 DIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFD 161

Query: 199 --RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVL 252
                   L  +L +      +   I  ++PNNP    + DE+L  I E+     ++V+ 
Sbjct: 162 LFEYRGEKLREKLESYLQT-GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220

Query: 253 DEAYTEFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           D AY              +           DN I+  + SK    AG R+G       + 
Sbjct: 221 DLAYFGMD-FRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLY 279

Query: 303 EYLWRAKQPY--------------------NVSVAAEVAACAALQNP----IYLEKVKEA 338
           E  +   +                        + +A+    A L+               
Sbjct: 280 EREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE 339

Query: 339 LIKERERLFKLLKDVPFLNPYPSYSN------FILCEVTSGMDAKKLKDDLAK 385
             ++   + K+  D  F   Y    N      F       GMD+ KL +   +
Sbjct: 340 YGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVR 392

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  114 bits (288), Expect = 1e-28
 Identities = 63/331 (19%), Positives = 121/331 (36%), Gaps = 35/331 (10%)

Query: 109 PPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HILVGCGADE 157
           PP    +AL + L  P  Y Y     +       A       G+  D     L   G+ E
Sbjct: 39  PPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE 217
            +  ++  + +P D ++     +  Y   A V       +P + D   +++ + + V   
Sbjct: 99  GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGV-WR 157

Query: 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRMEWV 269
           + K + L  PNNP G++ +     + L +     + ++ D  Y +    E    S +   
Sbjct: 158 EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQ-VYEGEAPSPLALP 216

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327
              + ++ L + SK   LAG R+G+       +  L R K    +N           AL+
Sbjct: 217 GAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALK 276

Query: 328 NP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM 386
            P   +        +    + + LK V      P  + ++   +  G+D  +    L + 
Sbjct: 277 TPKEVVRGYARVYRERALGMAEALKGV-LSLLPPRATMYLWGRLPEGVDDLEFGLRLVER 335

Query: 387 GVMIR------HYNNKELKGYVRVSVGKPEH 411
           GV +              KG+VR+++ +P  
Sbjct: 336 GVALAPGRGFGPGG----KGFVRIALVRPLE 362

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  114 bits (288), Expect = 2e-28
 Identities = 74/405 (18%), Positives = 142/405 (35%), Gaps = 55/405 (13%)

Query: 44  MSSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPF-EVLSIQLGRKPEDIVKID- 101
           M S+       +    R  G   I + L  +        F + +  ++   P  +  I+ 
Sbjct: 1   MGSSHHHHHHSSGLVPR--GSHMISNKLANIPDS----YFGKTMGRKIEHGPLPL--INM 52

Query: 102 ANENP-YGPPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HI 149
           A   P    P  + +   + L  P    Y         + A+     +   +  D    +
Sbjct: 53  AVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEV 112

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVE 208
            +  G    +  +  CV++PGD ++   P +T Y     +     V +      +  +  
Sbjct: 113 CILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWS 172

Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE- 263
            +   +  +K K I+LT PNNP GS    E   + +         +V D AY  F G + 
Sbjct: 173 KVDSQI-IDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF-GFDA 230

Query: 264 ---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA 318
              S +      D  I + + SK   ++G RVG+      +I+ L + +      +  A 
Sbjct: 231 KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGAL 290

Query: 319 EVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-- 375
           + AA  AL +   +LE+        R+R   +L        +     ++  E   G D  
Sbjct: 291 QDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSE 350

Query: 376 --AKKLKDDLAKMGVMI-------RHYNNKELKGYVRVSVGKPEH 411
              + L   + +  +++        +        YVR+S+   + 
Sbjct: 351 QFEQFL---VQEKSILVAPGKPFGENG-----NRYVRISLALDDQ 387

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  114 bits (288), Expect = 2e-28
 Identities = 60/337 (17%), Positives = 126/337 (37%), Gaps = 55/337 (16%)

Query: 110 PPEVREALGQLKFPYI-YPD----PESRRLRAALA----KDSGLE--SDHILVGCGADEL 158
           P    E + + K   + Y       E   LR A A    +   ++   +++LV  G  E 
Sbjct: 58  PEVFFERIYENKPEVVYYSHSAGIWE---LREAFASYYKRRQRVDVKPENVLVTNGGSEA 114

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER 216
           I      + +PGD+I+   P +  Y   A + G  ++ V    +  F++  + +   +  
Sbjct: 115 ILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN- 172

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFSGLESRMEWVKKH 272
           E+ K I L++P NP G +   +++  +        + +++DE Y+E         +  + 
Sbjct: 173 ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIV-------FRGEF 225

Query: 273 --------DNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQPY--NVSVAAEVA 321
                   D ++V+ + SK+    G RVG        +I +  +  Q       +  ++ 
Sbjct: 226 ASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQ-GRLAPPLLEQIG 284

Query: 322 ACAALQNPI-YLEKVKEALIKERERLFKLLKDVPFLN-PYPS---YSNFILCEVTSGMD- 375
           +   L     + + V+E   +  E + K L++        PS   Y       V    + 
Sbjct: 285 SVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYI-TAELPVEDAEEF 343

Query: 376 AKKL--KDDLAKMGVMIRH-----YNNKELKGYVRVS 405
           A+ +    ++     M+             K  +R++
Sbjct: 344 ARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIA 380

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  114 bits (288), Expect = 2e-28
 Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 45/300 (15%)

Query: 107 YGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGCGAD 156
              PP++ +A           Y P P S  LR A+A    +  G++ D    +LV  GA 
Sbjct: 37  EDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGAT 96

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADA 213
           E I   +  +++PG +++   P +  Y    A+ GA  V VP       F+L+ + +  A
Sbjct: 97  EAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA 156

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRME 267
           V   + + + + SP+NP G++++  +L  I    +   ++V+ DE Y    F        
Sbjct: 157 V-TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDH------ 209

Query: 268 WVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVS 315
              +H  L        RT      +K     G ++G+   P  +I  +  AKQ   Y   
Sbjct: 210 --ARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGG 267

Query: 316 VAAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTS 372
              + A   AL     ++  ++ +L   R+RL   L ++ F   + Y +Y  F+  +   
Sbjct: 268 APFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAVHDSYGTY--FLCADPRP 325

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  114 bits (287), Expect = 3e-28
 Identities = 51/333 (15%), Positives = 99/333 (29%), Gaps = 72/333 (21%)

Query: 126 YPDPESRRLRAALAKDSGL---ESDHILVGCGADELIDLIMR--------CVLDPGDKIV 174
           +   E  +    L +  G    +  +I+ G G  +LI  ++             P  K+V
Sbjct: 100 FISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVV 159

Query: 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234
              P + ++                   ++ N     +     +     +TSPNNP+G +
Sbjct: 160 AHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVS-NPEQYIEMVTSPNNPEGLL 212

Query: 235 INDEDLLKILEMPILVVLDEAY--TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV 292
                ++K        + D  Y    ++ ++       K D  I+L T SK  G +G R 
Sbjct: 213 --RHAVIKG----CKSIYDMVYYWPHYTPIKY------KADEDILLFTMSKFTGHSGSRF 260

Query: 293 GYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPI------------YLEKVKE 337
           G+      S+   L               ++ +   L+  +                  +
Sbjct: 261 GWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFK 320

Query: 338 ALIKERERLFKLLKDVPFLN----PYPSYSNFIL-------------CEVTSGMDAKKLK 380
            L +    +  LL      +    P   Y N+               CE     D  +  
Sbjct: 321 KLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQT- 379

Query: 381 DDLAKMGVMIR---HYNNKELKGYVRVSVGKPE 410
                  +  +    +       YVR+S+ K +
Sbjct: 380 --FQNGRINTQNGVGFEASS--RYVRLSLIKTQ 408

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  113 bits (286), Expect = 5e-28
 Identities = 58/284 (20%), Positives = 109/284 (38%), Gaps = 39/284 (13%)

Query: 114 REALGQLKFPYIYPDPE-SRRLRAALAK--------DSGLESDHILVGCGADELIDLIMR 164
            E +   K    + D       R A+AK            + + +++  GA    + I+ 
Sbjct: 67  SEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIF 126

Query: 165 CVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS--DFSLNVELIADAVERE---- 217
           C+ DPGD  +   P +  +  D     G  ++ +  +S  +F +  + + +A E      
Sbjct: 127 CLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN 186

Query: 218 -KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSG--------- 261
            K K + LT+P+NP G+ ++ + L  +L       I +V DE Y    F           
Sbjct: 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEI 246

Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG-AFPLSIIEYLWRAKQPYNVSVA--A 318
           L+ +       D + ++ + SK  GL G RVG   +F   ++    +      VS     
Sbjct: 247 LDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQY 306

Query: 319 EVAACAALQNPI--YLEKVKEALIKERERLFKLLKD--VPFLNP 358
            +AA  + +  +  +L +    L K  +     L+   +  L  
Sbjct: 307 FLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKN 350

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  111 bits (280), Expect = 2e-27
 Identities = 43/272 (15%), Positives = 91/272 (33%), Gaps = 43/272 (15%)

Query: 134 LRAALA----KDSGLE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           +R  LA      +G      D +++  G    + L +   +  GDK+    P +      
Sbjct: 83  IRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKL 142

Query: 187 AAVNGAAVVKVPRKS------DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
                  +V V             L++  + +A  +   +    ++PNNP G + + E++
Sbjct: 143 VEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAF-KAGARVFLFSNPNNPAGVVYSAEEI 201

Query: 241 LKI----LEMPILVVLDEAY-------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289
            +I          V+ D+ Y         ++ L +        +N++ +   SK   L+G
Sbjct: 202 GQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDA--ENVVTIMGPSKTESLSG 259

Query: 290 LRVGYGAFPLSIIEYLWRAK-QPY---NVSVAAEVAACAALQNPI-YLEKVKEALIKERE 344
            R+G      +II  +   K Q       +  ++            ++E         R+
Sbjct: 260 YRLGVAFGSRAIIARM--EKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRD 317

Query: 345 RLFKLLKDVPFL---NP------YPSYSNFIL 367
            L  +L+    +    P      +P      +
Sbjct: 318 ELLHVLRGCEGVFARTPQAGSYLFPRLPKLAV 349

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  109 bits (276), Expect = 8e-27
 Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 35/266 (13%)

Query: 134 LRAA----LAKDSGLE---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
           LR A    L K +G+E      I+V  GA++   + +   L  G++++   P F  Y   
Sbjct: 68  LREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPA 127

Query: 187 AAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI- 243
             + G   V+VP   + +F LNV+ +   V  +K + + + SP NP G+++  +DL +I 
Sbjct: 128 VILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEEIA 186

Query: 244 ---LEMPILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
              +E  ++V+ DE Y    +      S        +  I +  FSK   + G R+G+ A
Sbjct: 187 DFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA 246

Query: 297 FPLSIIEYLWRAK-QPYNVSVA---AEVAACAALQNPIYLEKVKE---ALIKERERLFKL 349
            P  IIE +   K Q YN +      + AA  AL++    + V+E      + R+ ++K 
Sbjct: 247 APSWIIERM--VKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKR 304

Query: 350 LKDVPF--LNP------YPSYSNFIL 367
           L ++    + P      +P   +  L
Sbjct: 305 LNEMGLPTVKPKGAFYIFPRIRDTGL 330

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  107 bits (270), Expect = 5e-26
 Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 25/268 (9%)

Query: 109 PPPEVREALGQ-LKFP--YIYPDPE-SRRLRAALA----KDSGLESD---HILVGCGADE 157
            PP + E L    +    + Y       RLR A++        ++ D     +V  G+ E
Sbjct: 51  TPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKE 110

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVE 215
            +  +M   LD GD I+   P++ ++ + A + GA V  VP     DF   +E       
Sbjct: 111 GLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRES- 169

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLE--SRME 267
             KP+ + L  P+NP    +  +   +++ +     ++VV D AY +  + G +  S M+
Sbjct: 170 IPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ 229

Query: 268 WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAA 325
                D  +   T SK   +AG R+G+      ++  L R K    Y      +VAA AA
Sbjct: 230 VPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAA 289

Query: 326 LQNP-IYLEKVKEALIKERERLFKLLKD 352
           L+     +  +     + R+ L K L++
Sbjct: 290 LEGDQQCVRDIARQYQQRRDVLVKGLRE 317

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  107 bits (270), Expect = 7e-26
 Identities = 49/274 (17%), Positives = 104/274 (37%), Gaps = 41/274 (14%)

Query: 126 YPDPE-SRRLRAALAK------DSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
           + D       + A+         + +  + +H+++  GA    +  + C+ DPG+ ++  
Sbjct: 82  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIP 141

Query: 177 PPTFTMYEFDAAV-NGAAVVKVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPN 228
            P +  ++ D     G  +V +   S   F +    + +A +       + K + +T+P+
Sbjct: 142 TPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPS 201

Query: 229 NPDGSIINDEDLLKILEM----PILVVLDEAY-------------TEFSGLESRMEWVKK 271
           NP G+ +   +L  +L       I ++ DE Y              E     +  E  + 
Sbjct: 202 NPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEV 261

Query: 272 HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPYNVSVAAEVAACAALQNPI 330
              + V+ + SK  GL G RVG        ++    +      VS   +    A L +  
Sbjct: 262 WQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKK 321

Query: 331 ----YLEKVKEALIKERERLFKLLKD--VPFLNP 358
               Y+ +  + L + +++L   L+   +  LN 
Sbjct: 322 LTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG 355

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  106 bits (266), Expect = 1e-25
 Identities = 85/389 (21%), Positives = 161/389 (41%), Gaps = 58/389 (14%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE-------NPYGPPPE-VREALGQ-LK 121
           L++LKPY    PF     +L    + I   +  E        P  P P+ + +AL   L 
Sbjct: 6   LKQLKPY----PFA----RLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLH 57

Query: 122 FPYIYPDPE-SRRLRAALA-------KDSGLESD-HILVGCGADELIDLIMRCVLDP--- 169
               YP       LR A A           +++D  IL   G+ E +   ++ VL+P   
Sbjct: 58  ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSD 117

Query: 170 --GDKIVDCP-PTFTMYEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLT 225
                IV  P P + +YE    + G  +         F+ +   I++ V  ++ K +F+ 
Sbjct: 118 GIKPAIV-SPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEV-WKRTKLVFVC 175

Query: 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF--------SGLESRMEWVKKHD 273
           SPNNP GS+++ +   ++ ++      ++  DE Y+E           L++  +  +   
Sbjct: 176 SPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ 235

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIY 331
            L++  + SKR+ + GLR G+ A    +++     +      +S+  + A+ AA  +  +
Sbjct: 236 KLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQH 295

Query: 332 LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV--- 388
           +   +    ++ ER+  +L+ V F    P  S +I  +V  G D    ++   K  +   
Sbjct: 296 VIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVL 354

Query: 389 ----MIRHYNNKEL-KGYVRVSVGKPEHT 412
               + R        +GYVR+++     T
Sbjct: 355 PGRFLARDTEQGNPGEGYVRIALVADVAT 383

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  106 bits (266), Expect = 2e-25
 Identities = 62/317 (19%), Positives = 111/317 (35%), Gaps = 62/317 (19%)

Query: 107 YGPPPEVREALGQ-----LKFPYIY-PDPESRRLRAALA----KDSGLESD---HILVGC 153
           Y  P     AL             Y       RL  AL+    +      +    +LV  
Sbjct: 49  YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTV 108

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP----------RKSDF 203
           GA E +   ++  +D GD+++   P F  YE      G     +P            +D+
Sbjct: 109 GAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADW 168

Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE- 258
            L+   +      EK K I + +P+NP G +++  +L  +     +  +L V DE Y   
Sbjct: 169 VLDNNELEALF-NEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHM 227

Query: 259 -FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWR 307
            F           +H  +  L     RT       K   L G ++G+   P ++++ L  
Sbjct: 228 VFEP--------FEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQM 279

Query: 308 AKQ--PYNVSVAAEVAACAALQNPI--------YLEKVKEALIKERERLFKLLKDVPF-- 355
             Q   Y  +   + A     +  +        Y   +   L+ +R+ +   L +V    
Sbjct: 280 VHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNP 339

Query: 356 LNPYPSYSNFILCEVTS 372
             P   Y  F++ + +S
Sbjct: 340 TVPQGGY--FMVADWSS 354

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  106 bits (266), Expect = 2e-25
 Identities = 72/316 (22%), Positives = 123/316 (38%), Gaps = 61/316 (19%)

Query: 107 YGPPPEVREALGQ---LKFPYIYPDPESR-RLRAALA----KDSGLESD---HILVGCGA 155
             PP  V+E L +   +     Y        L  AL+    K    + D    ILV  GA
Sbjct: 35  ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGA 94

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-----------RKSDFS 204
              +   ++ ++DPGD+++   P +  YE    + GA  V +P             SD++
Sbjct: 95  YGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWT 154

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE-- 258
            +   +       K K I L +P+NP G +   ++L  I    ++   L + DE Y    
Sbjct: 155 FDPRELESKF-SSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLV 213

Query: 259 FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLWRA 308
           ++G          H  +  L     RT       K   + G ++G+   P  +I++L   
Sbjct: 214 YTG--------HTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTV 265

Query: 309 KQ--PYNVSVAAEVAACAALQNPI--------YLEKVKEALIKERERLFKLLKDVPF--L 356
           +Q   Y  +   + A   A    I        Y   + + L  +R+R+ +LL  V    +
Sbjct: 266 QQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPI 325

Query: 357 NPYPSYSNFILCEVTS 372
            P   Y  FI+ +V+S
Sbjct: 326 VPDGGY--FIIADVSS 339

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  105 bits (264), Expect = 3e-25
 Identities = 51/252 (20%), Positives = 102/252 (40%), Gaps = 37/252 (14%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFD 186
            RAA+A       G    +D++ +  GA   + +  R +     D+ +   P F  Y+  
Sbjct: 81  TRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVF 140

Query: 187 AAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE 245
               GA +V+VP     F ++ + + + +     + + + SPNNP G++ ++E + K+ +
Sbjct: 141 VNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEETIKKLSD 199

Query: 246 M----------PILVVLDEAYTE--FSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRV 292
           +          PI ++ DE Y E  + G++   +      DN +V  ++SK   L G R+
Sbjct: 200 LLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYY--DNTLVCYSYSKSLSLPGERI 257

Query: 293 GYGAFPLSIIE------YLWRAKQPYNVSVA---AEVAACAALQNPIYLEKVKEALIKER 343
           GY   P  + +       +  A +      A    +                  A  + R
Sbjct: 258 GYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGAT----GDINAYKENR 313

Query: 344 ERLFKLLKDVPF 355
           + L++ L  + +
Sbjct: 314 DLLYEGLTRIGY 325

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  104 bits (261), Expect = 6e-25
 Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 36/243 (14%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
           LR  ++         +   D+I++  G+   +   +  ++D GD+++   P +  Y+   
Sbjct: 71  LREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFI 130

Query: 188 AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP 247
              GA  V           VE + +A+  +K K I + SP+NP G +I+ E      E  
Sbjct: 131 RFLGAKPVFCD------FTVESLEEAL-SDKTKAIIINSPSNPLGEVIDREIYEFAYENI 183

Query: 248 ILVVLDEAYTEFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAF 297
             ++ DE Y       + + +  K           +  I++  FSK   + G R+GY   
Sbjct: 184 PYIISDEIY-------NGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVIS 236

Query: 298 PLSIIEYLWRAKQPYNVSVA---AEVAACAALQNPI--YLEKVKEALIKERERLFKLLKD 352
              IIE + + +Q      A   ++ AA  A +      +  + +   + R  + K +KD
Sbjct: 237 NDEIIEAILKLQQ-NLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKD 295

Query: 353 VPF 355
             +
Sbjct: 296 FGW 298

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  104 bits (261), Expect = 1e-24
 Identities = 61/318 (19%), Positives = 120/318 (37%), Gaps = 63/318 (19%)

Query: 107 YGPPPEVREALGQ-LKFPYIY----PDPESRRLRAALA----KDSGLESD---HILVGCG 154
           + PP    EA    +   ++            L   LA    +  G E D   ++LV  G
Sbjct: 40  FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVG 99

Query: 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSD 202
               +    + ++D GD+++   P F  YE    + G   V V               S+
Sbjct: 100 GYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSN 159

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE 258
           + L+   +A      + K + L +PNNP G + + E+L  +     +  ++ + DE Y  
Sbjct: 160 WQLDPMELAGKF-TSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQW 218

Query: 259 --FSGLESRMEWVKKHDNLIVL-----RT-----FSKRAGLAGLRVGYGAFPLSIIEYLW 306
             + G         +H ++  L     RT       K     G +VG+   P  I+++L 
Sbjct: 219 MVYDG--------HQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLR 270

Query: 307 RAKQ--PYNVSVAAEVAACAALQNPI--------YLEKVKEALIKERERLFKLLKDVPF- 355
              Q   ++    ++ A   + +           Y  +  +A+ + R+ + + L+ V   
Sbjct: 271 TVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLK 330

Query: 356 -LNPYPSYSNFILCEVTS 372
            + P  SY  F++ +++ 
Sbjct: 331 PIIPQGSY--FLITDISD 346

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  103 bits (259), Expect = 2e-24
 Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 66/352 (18%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE + +     I    N YG     PE+R+A+ +                    + +G++
Sbjct: 56  PEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVE-----------------REKRKNGVD 98

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              D + V     E + LI   +LDPGD+I+   P++  Y       G   V+     + 
Sbjct: 99  ITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEE 158

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYT 257
           D+  +++ I   +  ++ K I + +PNNP G++ + + L +IL +     I V+ DE Y 
Sbjct: 159 DWQPDIDDIRKKIT-DRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIY- 216

Query: 258 EFSGLESRMEWVKKH---------DNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLW 306
                   M +  +H           +IV+   SK     G R+GY  F  P + +  + 
Sbjct: 217 ------DLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR 270

Query: 307 RA--KQPY---NVSVAAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVPFLN-PY 359
            A  +        +  A+ AA A L  P+ YL++  + L + R+ ++K L ++P ++   
Sbjct: 271 EAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTK 330

Query: 360 PS---YSNFILCEVTSGMDAKKLKDD-LAKMGVMIRHYN--NKELKGYVRVS 405
           P    Y  F   EV    + K+   D L    V+  H +   +   G+ R  
Sbjct: 331 PQGAFYI-FPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAV 381

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  102 bits (257), Expect = 3e-24
 Identities = 73/414 (17%), Positives = 147/414 (35%), Gaps = 72/414 (17%)

Query: 45  SSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE 104
           SS + +  +    Q      S   S + K     PI              + ++ +   +
Sbjct: 8   SSGVDLGTENLYFQSMW---SVRPSDMAKKTFN-PIRAIVDNMKVKPNPNKTMISLSIGD 63

Query: 105 -NPYG---PPPEVREAL------GQLKFPYIYPD----PESRRLRAALA-----KDSGLE 145
              +G     PEV +A+      G+      Y            R  +A      ++ LE
Sbjct: 64  PTVFGNLPTDPEVTQAMKDALDSGKYNG---YAPSIGFLS---SREEIASYYHCPEAPLE 117

Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVP--RKSD 202
           +  +++  G  + IDL +  + +PG  I+  P P F++Y+  A   G  V       +  
Sbjct: 118 AKDVILTSGCSQAIDLCLAVLANPGQNIL-VPRPGFSLYKTLAESMGIEVKLYNLLPEKS 176

Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY-- 256
           + ++++ +   ++ EK  C+ + +P+NP GS+ +   L KIL +     + ++ DE Y  
Sbjct: 177 WEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGD 235

Query: 257 -----TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-------GAFPLSIIEY 304
                 ++  L +    +     ++     +KR  + G R+G+         F   I + 
Sbjct: 236 MVFSDCKYEPLAT----LSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291

Query: 305 LWRAKQP-YNVSVAAEVAACAALQN-PI-YLEKVKEALIKERERLFKLLKDVPFLNP--- 358
           L +  Q         + A  + L   P  +       L    +  +  L  +P L P   
Sbjct: 292 LVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRP 351

Query: 359 ------YPSYSNFILCEVTSGMD-AKKLKDDLAKMGVMIRHYNNKELKGYVRVS 405
                           E  + ++  ++L   +A+  V        E   ++RV 
Sbjct: 352 SGAMYLMVGIEMEHFPEFENDVEFTERL---VAEQSVHCLPATCFEYPNFIRVV 402

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  102 bits (256), Expect = 5e-24
 Identities = 59/340 (17%), Positives = 122/340 (35%), Gaps = 48/340 (14%)

Query: 101 DANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
               N Y P    PE REA+    +                   S +  D++++  G   
Sbjct: 65  SQECNGYFPTVGSPEAREAVAT-WW--------RNSFVHKEELKSTIVKDNVVLCSGGSH 115

Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVE 215
            I + +  + D GD  +   P F  YE      G  +       ++D+  +++ I    +
Sbjct: 116 GILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSGLESRMEWV 269
            +K K + +T+P+NP GS  + + +  I+ +     + +  DE Y    F G +    + 
Sbjct: 176 -DKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFT 234

Query: 270 -----KKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEYLWRAKQP-YNVSVA 317
                +     ++L   +K   + G R+G+  +        S +E L R           
Sbjct: 235 SVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTV 294

Query: 318 AEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP---------YPSYSNFI 366
            + A   AL N    +L+++   + +    L+  + +   L P                 
Sbjct: 295 VQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK 354

Query: 367 LCEVTSGMD-AKKLKDDLAKMGVMIRHYNNKELKGYVRVS 405
             ++ + ++  +KL   L +  V +         G+ R++
Sbjct: 355 YRDIKTDVEFFEKL---LEEENVQVLPGTIFHAPGFTRLT 391

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score = 99.7 bits (249), Expect = 5e-23
 Identities = 55/314 (17%), Positives = 115/314 (36%), Gaps = 61/314 (19%)

Query: 107 YGPPPEVREALGQ---LKFPYIY-PDPESRRLRAALA----KDSGLESD--HILVGCGAD 156
           Y PP    +   +   +     Y P      L  +L          E    ++ V  GA+
Sbjct: 69  YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSDFS 204
           E I   +  +L+ GD+++   P F  Y  +  + G  VV VP            R  +++
Sbjct: 129 EGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188

Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEFS 260
           ++ E    A+   K K + + +P+NP G +   E+L  +    ++  ++++ DE Y    
Sbjct: 189 IDFEQFEKAI-TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVY---- 243

Query: 261 GLESRMEWV----KKHDNLIVL-----RT-----FSKRAGLAGLRVGYG-AFPLSIIEYL 305
                 E +           +       T       K     G R+G+  +    ++ Y 
Sbjct: 244 ------EHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYA 297

Query: 306 WRAKQ--PYNVSVAAEVAACAALQNPI---YLEKVKEALIKERERLFKLLKDVPF--LNP 358
            +A     +      + A   ++ + +   Y EK+++  I + +    +  ++      P
Sbjct: 298 AKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAP 357

Query: 359 YPSYSNFILCEVTS 372
             +Y  F+L + + 
Sbjct: 358 EGTY--FVLVDFSK 369

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score = 97.3 bits (243), Expect = 2e-22
 Identities = 62/295 (21%), Positives = 128/295 (43%), Gaps = 43/295 (14%)

Query: 126 YPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
           Y   E    LRA +A+  G+  + +L+  G+ + +DL+ +  LD G  ++   P++    
Sbjct: 70  YSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYM--- 126

Query: 185 FDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPDGSIIND 237
              A+      G   + VP   +   +++ + + ++RE+P+ ++   P+  NP G +   
Sbjct: 127 --GAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLY-LIPSFQNPTGGLTPL 182

Query: 238 EDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVKKHD------NLIVLRTFSKRA 285
               ++L+M     ++VV D+AY E  F    +R+  + +         +I L +FSK  
Sbjct: 183 PARKRLLQMVMERGLVVVEDDAYRELYFGE--ARLPSLFELAREAGYPGVIYLGSFSKV- 239

Query: 286 GLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPI--YLEKVKEALI 340
            L+ GLRV +       ++ L +AKQ    +  +  ++     L+      LE+V+    
Sbjct: 240 -LSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYR 298

Query: 341 KERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMGVMI 390
           ++ + +   L     +     Y+      F+  E+  G+ A+ L     +  V  
Sbjct: 299 EKAQAMLHALDR--EVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAF 351

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score = 96.8 bits (242), Expect = 3e-22
 Identities = 57/297 (19%), Positives = 109/297 (36%), Gaps = 59/297 (19%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE +V+     +   E  Y  P    E+RE + + +                  +    +
Sbjct: 56  PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAK-RI----------------GERYKKD 98

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              D ++V  GA + +      +LDPGD+++   P +  Y     + G  V  V      
Sbjct: 99  ISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSK 158

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYT 257
           +F  ++E +   +   K K + + SPNNP G +   E L  +     +    ++ DE Y 
Sbjct: 159 NFQPSLEEVEGLL-VGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYD 217

Query: 258 EFSGLESRMEWVKKH----------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
                     +  +           D ++ +  FSK   + G RVGY      +   +  
Sbjct: 218 SLV-------YTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAV-- 268

Query: 308 AK-QPY---NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP 360
           +K Q +    ++  A+ AA  AL+       + +   + +  + + LK +      P
Sbjct: 269 SKIQSHTTSCINTVAQYAALKALEVDN--SYMVQTFKERKNFVVERLKKMGVKFVEP 323

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score = 93.5 bits (233), Expect = 5e-21
 Identities = 45/244 (18%), Positives = 80/244 (32%), Gaps = 41/244 (16%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFD 186
           L  ALA    +  G +    +I +  G+      +                 F +  E+ 
Sbjct: 80  LLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYI 139

Query: 187 AAVN-----------GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
              +              +  +P +  F  +V+     +  E+   I ++ P NP G++I
Sbjct: 140 GYADSGLEDDLFVSARPNIELLP-EGQFKYHVDFEHLHI-GEETGMICVSRPTNPTGNVI 197

Query: 236 NDEDLLKILEM----PILVVLDEAY------TEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
            DE+L+K+  +     I +V+D AY        FS             N+I+  + SK  
Sbjct: 198 TDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWN-----PNIILCMSLSK-L 251

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKE- 342
           GL G R G        I  +                   C  ++    L   +  +IK  
Sbjct: 252 GLPGSRCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSET-VIKPF 310

Query: 343 -RER 345
             +R
Sbjct: 311 YYQR 314

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score = 91.5 bits (228), Expect = 2e-20
 Identities = 57/259 (22%), Positives = 95/259 (36%), Gaps = 51/259 (19%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA---KDSGLESDHILVGCGAD 156
               V EA                Y  P+     LR  L+       +++  I +  GA 
Sbjct: 47  LNASVAEAFASSIARLSSPTTCRGYG-PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAK 105

Query: 157 ELIDLI-MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-AVVKVP--RKSDFSLNVELIAD 212
              DL  +     P   +    P++  Y   A + GA  ++ +P  +++ F        +
Sbjct: 106 V--DLFRLLSFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF------FPE 157

Query: 213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF--------S 260
             E      + L SPNNP G+++N + L  I+       IL++ D AY+ F        S
Sbjct: 158 FPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKS 217

Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY--------GAFPLSIIEYLWRAKQP- 311
             E  +   +     I + +FSK  G AG+R+G+         A    +I+   R     
Sbjct: 218 IFE--IPDAR--FCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTT 273

Query: 312 -YNVSVAAEVAACAALQNP 329
               S+ A+ A  A L   
Sbjct: 274 FNGASIPAQEAGVAGLSIL 292

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score = 91.0 bits (226), Expect = 5e-20
 Identities = 50/267 (18%), Positives = 84/267 (31%), Gaps = 30/267 (11%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPE-VREA-LGQLKFPYIYPDPESRRLRAALAK------ 140
              +   D V     E       + V E   G +   Y  PD         +        
Sbjct: 97  DEDKFLIDAVNYCHTE-LGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELS 155

Query: 141 --DSGLESDH-ILVGCGADELI-----DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA 192
             D+ L     +    G    I      L    +L  GDKI    P FT Y     +   
Sbjct: 156 YKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDY 215

Query: 193 AVVKVP----RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-- 246
            +V+V      K+D+ +    I    +    K + + +P NP     +   L  I +   
Sbjct: 216 ELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEFDTNALNAIKQAVE 274

Query: 247 ---PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
               ++++ DE Y  F    +S    V    N +++ ++SK  G  G R+G  A     +
Sbjct: 275 KNPKLMIISDEVYGAFVPNFKSIYSVVP--YNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332

Query: 303 EYLWRAKQPYNVSVAAEVAACAALQNP 329
                A               + + +P
Sbjct: 333 FDDNIAHLDKVELRQLHKRYSSVVLDP 359

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score = 89.9 bits (223), Expect = 1e-19
 Identities = 44/252 (17%), Positives = 100/252 (39%), Gaps = 34/252 (13%)

Query: 134 LRAALA----KDSGLESD--HILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFD 186
           LR A+A       G  ++   I +  GA   + L+M+ ++ +  D I+   P + +Y   
Sbjct: 139 LRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSAS 198

Query: 187 AAVNGAAVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDED 239
            A++G A+V       + + L    +   +E         + + + +P NP G ++ +E+
Sbjct: 199 IALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEEN 258

Query: 240 LLKILEM----PILVVLDEAYTE-----------FSGLESRMEWVKKHDNLIVLRTFSK- 283
              I++      ++++ DE Y E           F  +   + + ++   L+  ++ SK 
Sbjct: 259 QYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKG 318

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQPYNV----SVAAEVAACAALQNPIYLEKVKEAL 339
             G  G R GY            +  +  +V    ++  ++ A   +  P   ++   + 
Sbjct: 319 YYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASY 378

Query: 340 IKERERLFKLLK 351
             E++ +   L 
Sbjct: 379 KAEKDGILASLA 390

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score = 88.5 bits (220), Expect = 3e-19
 Identities = 47/263 (17%), Positives = 86/263 (32%), Gaps = 49/263 (18%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA----KDSGLESDHILVGCGA 155
            P  + +A+          +    Y   E     LR A+A      +G  +D I +  G+
Sbjct: 83  LPKYIADAMAKAAAGLATREGYSGYG-AEQGQGALREAVASTFYGHAGRAADEIFISDGS 141

Query: 156 DELIDLI-MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA--- 211
               D+  ++ +      +    P++ +Y   + + G          D    +       
Sbjct: 142 KC--DIARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNH 199

Query: 212 ---DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF----- 259
              D  + ++   IF  SPNNP G+      L +++        ++V D AY  +     
Sbjct: 200 FFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD 259

Query: 260 ---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY--------GAFPLSIIEYLWRA 308
              +  E  +      +  I   +FSK AG  G+R+G+         A    +     R 
Sbjct: 260 CPKTIYE--IPGAD--EVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRV 315

Query: 309 KQP--YNVSVAAEVAACAALQNP 329
                   S   +    A LQ  
Sbjct: 316 MTTCFNGASNIVQAGGLACLQPE 338

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score = 88.4 bits (220), Expect = 3e-19
 Identities = 49/260 (18%), Positives = 86/260 (33%), Gaps = 48/260 (18%)

Query: 109 PPPEVREAL-------GQLKFPYIYPDPES--RRLRAALA----KDSGLESDHILVGCGA 155
            P  +  A+         ++    Y   E   + LRAA+A       G+  D + V  GA
Sbjct: 70  IPEVITSAMAKKAHELSTIEGYSGYG-AEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGA 128

Query: 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVEL------ 209
              I  + + +      I    P++  Y   + + G           +     +      
Sbjct: 129 KCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPEN 187

Query: 210 --IADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF---- 259
               D     +   IF  SPNNP G+    E L +++E       ++V D AY  +    
Sbjct: 188 GFFPDLSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD 247

Query: 260 ---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----- 311
              S  E  +   +  +  +   +FS  AG  G+R+G+   P  ++              
Sbjct: 248 NPRSIFE--IPGAE--EVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRI 303

Query: 312 -----YNVSVAAEVAACAAL 326
                   S  ++  A A L
Sbjct: 304 ICTCFNGASNISQAGALACL 323

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score = 87.5 bits (217), Expect = 6e-19
 Identities = 49/332 (14%), Positives = 104/332 (31%), Gaps = 61/332 (18%)

Query: 134 LRAALA----KDSGLE--SDHILVGCGA----DELIDLIMRCVLDPGDKIVDCP------ 177
              AL     +       S++I +  G+      L +L     ++   +  +        
Sbjct: 88  FIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSI 147

Query: 178 -----PTFTMYEFDAAVNGAAVVKVPR-----------KSDFSLNVELIADAVE--REKP 219
                P +  Y             +P               + ++ E + +       + 
Sbjct: 148 LLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRI 207

Query: 220 KCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE-FSGLESRMEWVKKHDN 274
             I  + P NP G+++ DE++  + E+     I +++D AY   F  +      +   +N
Sbjct: 208 GAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNN 267

Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL 332
            I+  + SK  GL G+R G       +IE +           +      A   + N    
Sbjct: 268 TILCFSLSK-IGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIK 326

Query: 333 EKVKEALIKE-RER-------LFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDL 383
           +     +    +++       L + L D P +   P  + F+        +    L + L
Sbjct: 327 QLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL 386

Query: 384 AKMGVMI----------RHYNNKELKGYVRVS 405
              G +I             + +     +R+S
Sbjct: 387 KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMS 418

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score = 87.5 bits (217), Expect = 8e-19
 Identities = 49/256 (19%), Positives = 94/256 (36%), Gaps = 38/256 (14%)

Query: 134 LRAALA-----KDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVD---CP-PTFTM 182
           +R  +A     +D G+ +D  +I +  GA + I  I++ ++  G K       P P + +
Sbjct: 134 IREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPL 193

Query: 183 YEFDAAVNGAAVVKVPRK--SDFSLNVE----LIADAVEREKPKCIFLTSPNNPDGSIIN 236
           Y    +   A  V       + ++LNV      + +A +   PK + + +P NP G + +
Sbjct: 194 YSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQS 253

Query: 237 DEDLLKILEM----PILVVLDEAYTEF------------SGLESRMEWVKKHDNLIVLRT 280
            + +  ++       + ++ DE Y +               L         +  L    +
Sbjct: 254 RKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHS 313

Query: 281 FSKR-AGLAGLRVGYGA---FPLSIIEYLWRAKQPYNVS-VAAEVAACAALQNPIYLEKV 335
            SK   G  G R GY         I   L +         V+ + A    +  P+  E+ 
Sbjct: 314 TSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEES 373

Query: 336 KEALIKERERLFKLLK 351
            E   +E+E +   L 
Sbjct: 374 FEQFSREKESVLGNLA 389

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score = 87.6 bits (217), Expect = 8e-19
 Identities = 46/236 (19%), Positives = 89/236 (37%), Gaps = 27/236 (11%)

Query: 92  RKPEDIVKIDANENPYGPPPEVREA-LGQLKFPYIYPD--PESRR--LRAALAKDSGL-- 144
           R     +    ++    P   + E   G L   Y  P          +R  + ++ G   
Sbjct: 101 RFLGKSLSYVRDQLGLDPAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADA 160

Query: 145 ---ESDHILVGCGADELI-----DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
              ES ++    G    +      L +  +L  GDK+    P FT Y     +   A+ +
Sbjct: 161 IPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEE 220

Query: 197 VPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM------P 247
           V   +D SLN +     +++      K  F  +P+NP    ++   L ++  +       
Sbjct: 221 VAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPD 280

Query: 248 ILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
           ++++ D+ Y  F+   +S        +N +++ +FSK  G  G R+G  A     +
Sbjct: 281 LMILTDDVYGTFADDFQSLFAICP--ENTLLVYSFSKYFGATGWRLGVVAAHQQNV 334

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score = 86.9 bits (216), Expect = 9e-19
 Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 51/303 (16%)

Query: 126 YPDPE-SRRLRAALA---KDSGL--ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179
           Y   +    LR  L           + + I++  G+ + +DLI R  L+PGD +V   PT
Sbjct: 114 YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPT 173

Query: 180 FTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPN- 228
           +      AA+          +++P   +  + VE++ + ++      +K K ++ T P  
Sbjct: 174 YL-----AALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVY-TVPTF 226

Query: 229 -NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK---KHDNLIVL 278
            NP G  +N++    +LE+      +VV D+ Y E  +SG  +  + +K       +I L
Sbjct: 227 QNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKALDNEGRVIYL 284

Query: 279 RTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIY---L 332
            TFSK   LA G R+G+      II  +  AKQ      +V  +V A   +        +
Sbjct: 285 GTFSKI--LAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHI 342

Query: 333 EKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMG 387
            ++++     R+ + + L++  F+     ++      FI   +  G+D+KK+ +   K G
Sbjct: 343 PEIRKFYKPRRDAMLEALEE--FMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERAIKKG 400

Query: 388 VMI 390
           V  
Sbjct: 401 VAY 403

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score = 86.5 bits (215), Expect = 1e-18
 Identities = 65/329 (19%), Positives = 120/329 (36%), Gaps = 63/329 (19%)

Query: 126 YPDPE-SRRLRAALAK-------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177
           Y   E    L+  + K        +GL+ D+++   G+ + +DLI +  LD     V   
Sbjct: 81  YSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140

Query: 178 PTFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLT 225
           P +       A+N      A  V VP + D  +++ ++   +         ++ K I+  
Sbjct: 141 PAYL-----GAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIY-V 193

Query: 226 SPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVK---KHDN 274
             N  NP G   + E    ++E+     + +V D+ Y    + G    ++ +      + 
Sbjct: 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG--ETVDPIFKIGGPER 251

Query: 275 LIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIY 331
           +++L TFSK   LA GLR+G  A     I  + +AKQ             A   L+    
Sbjct: 252 VVLLNTFSKV--LAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL 309

Query: 332 ---LEKVKEALIKER--------ERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLK 380
              L+   E   + +        E  F  +  V ++        FI   +  G D  ++ 
Sbjct: 310 LEQLKPTIELY-RRKRTVMLNALEEYFSDIPGVKWVKSEGGL--FIWLTLPEGFDTWEMF 366

Query: 381 DDLAKMGVMI----RHYNNKELKGYVRVS 405
           +   +  V            E    +R+S
Sbjct: 367 EYAKRKKVFYVPGRVFKVYDEPSPSMRLS 395

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score = 86.6 bits (215), Expect = 1e-18
 Identities = 57/332 (17%), Positives = 106/332 (31%), Gaps = 50/332 (15%)

Query: 103 NENPYGPPPEVREALGQLK----FPYIYPD--PESRRLRAALAK--DSGLESDH---ILV 151
           N++       +      L     FPY  P    E R L        +  L  D+    +V
Sbjct: 59  NKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIV 118

Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVEL 209
                  + L+    ++  D I+     +  Y+        A ++       D     + 
Sbjct: 119 TNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDS 178

Query: 210 IADAVEREKPKC---IFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYT 257
           + +A++    K    + L  PNNP G     +++  I+E           ++ V+D+AY 
Sbjct: 179 LVEALQ-SYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY 237

Query: 258 EF--------SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
                     S   +           I L   +K     G RVG+  F  S        +
Sbjct: 238 GLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLE 297

Query: 310 QP------YNVS---VAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV------- 353
                    N+S   +  + A    L+N    +K  E  I+  +  +++ K+V       
Sbjct: 298 AKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYH 357

Query: 354 PFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK 385
                Y   S + +      +D + L+  L  
Sbjct: 358 SHWQAYDFNSGYFMAIKVHDVDPEALRKHLID 389

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score = 86.4 bits (215), Expect = 1e-18
 Identities = 65/313 (20%), Positives = 123/313 (39%), Gaps = 67/313 (21%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           PE + +     +   +  Y PP   PE+REAL + KF                 +++GL 
Sbjct: 46  PEHVKEAARRALAQGKTKYAPPAGIPELREALAE-KF----------------RRENGLS 88

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
              +  +V  G  + +  + + +LDPGD+++   P +  Y       G  VV+V    + 
Sbjct: 89  VTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEE 148

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYT 257
            F  + E +  A+   + K + + SPNNP G++   E L  +    +E    +V DE Y 
Sbjct: 149 GFVPDPERVRRAI-TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIY- 206

Query: 258 EFSGLESRMEWVKKH--------DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
                   + +  +H        ++ + +   +K   + G R+GY   P  +I+ +  A 
Sbjct: 207 ------EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAM--AS 258

Query: 310 -Q------PYNVSVAAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVPF--LNP- 358
                   P  ++  A + A    +    ++E  +EA  + R+ L + L  +    + P 
Sbjct: 259 VSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318

Query: 359 -----YPSYSNFI 366
                    S   
Sbjct: 319 GAFYVLMDTSPIA 331

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score = 85.3 bits (212), Expect = 2e-18
 Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 54/291 (18%)

Query: 94  PEDIVK-----IDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145
           P+ IV+     ++  +  YGP    P +REA+ Q K                  +D+GL 
Sbjct: 45  PKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQ-KL----------------QRDNGLC 87

Query: 146 --SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKS 201
             +D+ILV  G  + I  +M  +++PGD+++   P +  Y     +     V +P   ++
Sbjct: 88  YGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVET 147

Query: 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY- 256
            F ++ E I  A+   K K +   +P+NP G +   +++  I ++     + V+ DE Y 
Sbjct: 148 QFKVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYE 206

Query: 257 ------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
                  +   + +        +  +V   F+K   + G RVG+ A P+ ++    +A  
Sbjct: 207 KILYDDAQHLSIGAASPEAY--ERSVVCSGFAKTYAMTGWRVGFLAGPVPLV----KAAT 260

Query: 311 PY------NVSVAAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVP 354
                   NV   A+  A AA +N    ++++  A  + R  +   L  +P
Sbjct: 261 KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMP 311

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score = 85.4 bits (212), Expect = 3e-18
 Identities = 73/324 (22%), Positives = 136/324 (41%), Gaps = 57/324 (17%)

Query: 126 YPDPE-SRRLRAALA----KDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
           Y        LR  LA    K   LE   ++I++  G    +DL+ R ++DPGD ++   P
Sbjct: 71  YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENP 130

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPN 228
           ++        +      GA +  VP  +D  + V+L+ + ++      +K K I+ T P 
Sbjct: 131 SYI-----NTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIY-TIPT 183

Query: 229 --NPDGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLESRMEWVKKHD---NLIV 277
             NP G  ++ E    +LE+     +L++ D AY    + G    +  +K  D    +IV
Sbjct: 184 GQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG--GDIVPLKALDNEGRVIV 241

Query: 278 LRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIY--- 331
             T SK   L  G R+G+      I++ +   KQP  +     ++  A   L+   +   
Sbjct: 242 AGTLSKV--LGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKY 299

Query: 332 -LEKVKEALIKERERLFKLLK----DVPFLNPYPSYSNFILCEVTSGMDAKKL-KDDLAK 385
            LE       ++R+ + K L+    +  F  P      F++  +  G D      + + +
Sbjct: 300 HLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGM--FVMFFLPEGADGISFANELMER 357

Query: 386 MGVMI----RHYNNKELKGYVRVS 405
            GV++      Y ++  K  +R++
Sbjct: 358 EGVVVVPGKPFYTDESGKNAIRLN 381

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score = 79.7 bits (197), Expect = 2e-16
 Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 47/284 (16%)

Query: 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVN-----GAAVV 195
           S LE   +++       +       L    K++    P      +D         G  ++
Sbjct: 96  SSLELQGLVLTFALLHGVRGSTGPWLSQTPKMI-VTVPG-----YDRHFLLLQTLGFELL 149

Query: 196 KVPRKSDFSLNVELIADAV-EREKPKCIFLTSPN--NPDGSIINDEDLLKILEMP----- 247
            V  +SD   +V+ +          K I    P   NP G  I+ E   ++  +      
Sbjct: 150 TVDMQSD-GPDVDAVERLAGTDPSVKGIL-FVPTYSNPGGETISLEKARRLAGLQAAAPD 207

Query: 248 ILVVLDEAYTE--FSG-----LESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGYGAF 297
             +  D+AY              + +   +         V  + SK    AG  +G+ A 
Sbjct: 208 FTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-FAGAGLGFVAS 266

Query: 298 PLSIIEYLWRAKQ-------PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLL 350
               I +L +              +   +            +      +  +   + ++L
Sbjct: 267 SEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVL 326

Query: 351 KDV-PFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMGV 388
           +        Y +++      FI  +    + A ++       GV
Sbjct: 327 RAELGEGGEYATWTLPKGGYFISLDTAEPV-ADRVVKLAEAAGV 369

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 77.0 bits (190), Expect = 1e-15
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 45/213 (21%)

Query: 134 LRAALAKDSGLESDHILVGCGADELI--DLIMRCVL------------DPGDKIVDCP-P 178
           +R   A+  GL +D ++   G+   I  DLI                 +   K + CP P
Sbjct: 81  IRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWL-CPVP 139

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPD 231
            +     D         G  ++ VP   +   ++ ++ + V+  + K ++ T P   NP 
Sbjct: 140 GY-----DRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMW-TVPVFGNPT 192

Query: 232 GSIINDEDLLKILEMP-----ILVVLDEAYTE--FSG----LESRMEWVKKHDN---LIV 277
           G   +++   ++ EM        +V D AY     S     + + +E+ +   N      
Sbjct: 193 GVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWF 252

Query: 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
           + + SK    AG  V + A     IE+      
Sbjct: 253 MSSTSK-ITHAGSGVSFFASSKENIEWYASHAN 284

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 70/401 (17%), Positives = 140/401 (34%), Gaps = 76/401 (18%)

Query: 65  SFIRSHLRKLKPYQP-------------ILPFEVLSIQLGRKPEDIVKIDANENP--YGP 109
           S IR+    L                  + PF+   I +          +  +    Y P
Sbjct: 17  SPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSP 76

Query: 110 P---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166
               PE+   L QL+                +          + V  G+ + +  +   +
Sbjct: 77  SAGIPELLSWLKQLQ--------IKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI 128

Query: 167 LDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------- 216
           ++PGD ++   P +  T+        G  ++ V       +  + + D + R        
Sbjct: 129 INPGDNVLLDEPAYSGTLQSLHPL--GCNIINVASDES-GIVPDSLRDILSRWKPEDAKN 185

Query: 217 ---EKPKCIFLTSPN--NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME 267
                PK ++ T PN  NP G+ +  E   +I E+      L++ D+ Y      + R+ 
Sbjct: 186 PQKNTPKFLY-TVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVP 244

Query: 268 WVKKHD---NLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVA 321
                D    +I   +FSK   ++ GLR+G+   P  +IE +    Q    + S   ++ 
Sbjct: 245 TFLSMDVDGRVIRADSFSKI--ISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLM 302

Query: 322 ACAALQNPIY------LEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEV 370
               L           +++V +    +++ +        +L     +       F+  +V
Sbjct: 303 ISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADK--WLTGLAEWHVPAAGMFLWIKV 360

Query: 371 TSGMDAKKLKDDLA-KMGVMIR-----HYNNKELKGYVRVS 405
               D K+L ++ A KMGV++      + ++     Y+R S
Sbjct: 361 KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRAS 401

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 73.2 bits (180), Expect = 3e-14
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 45/213 (21%)

Query: 134 LRAALAKDSGLESDHILVGCGADELI--------------DLIMRCVLDPGDKIVDCP-P 178
           +R   A   G+  + +L G  +   I              D +     +   K + CP P
Sbjct: 83  IRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWI-CPVP 141

Query: 179 TFTMYEFDAAVN-----GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN--NPD 231
            +     D   +     G  ++ VP   D   +++ + + V+  + K ++   P   NP 
Sbjct: 142 GY-----DRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMW-VVPVFSNPT 194

Query: 232 GSIINDEDLLKILEMP-----ILVVLDEAYTE--FSG-------LESRMEWVKKHDNLIV 277
           G  + ++   ++  M        VV D AY     +        +    E     +    
Sbjct: 195 GFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWA 254

Query: 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
             + SK   LAG  V +        ++      
Sbjct: 255 FTSTSK-ITLAGAGVSFFLTSAENRKWYTGHAG 286

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.7 bits (141), Expect = 2e-09
 Identities = 69/432 (15%), Positives = 129/432 (29%), Gaps = 152/432 (35%)

Query: 81  LPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAK 140
           + FE    Q   K  DI+ +   E+ +     V           +  D      ++ L+K
Sbjct: 7   MDFETGEHQYQYK--DILSV--FEDAF-----VDN----FDCKDV-QD----MPKSILSK 48

Query: 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF------TMYEF--------- 185
           +   E DHI++   A      +   +L   +++V     F        Y+F         
Sbjct: 49  E---EIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ---KFVEEVLRINYKFLMSPIKTEQ 102

Query: 186 --------------DAAVNGAAVVK---VPRKSDF--------SLNVE------------ 208
                         D   N   V     V R   +         L               
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSG 162

Query: 209 ---LIADAVEREKPKC-----IF-LTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTE- 258
              +  D     K +C     IF L        +  + E +L++L+  +L  +D  +T  
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNL-----KNCNSPETVLEMLQK-LLYQIDPNWTSR 216

Query: 259 ---FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYN 313
               S ++ R+  ++     ++     +               L ++  +  AK    +N
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENC-------------LLVLLNVQNAKAWNAFN 263

Query: 314 V-----------SVAAEVAACAALQNPIYLEKVKEALIK-ERERLF-KLL----KDVP-- 354
           +            V   ++  AA    I L+     L   E + L  K L    +D+P  
Sbjct: 264 LSCKILLTTRFKQVTDFLS--AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 355 --FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHT 412
               NP        L      + A+ ++D LA      +H N  +L   +  S+      
Sbjct: 322 VLTTNP------RRL-----SIIAESIRDGLATWD-NWKHVNCDKLTTIIESSL------ 363

Query: 413 DALMECLM-HLY 423
           + L       ++
Sbjct: 364 NVLEPAEYRKMF 375

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 4e-07
 Identities = 67/477 (14%), Positives = 151/477 (31%), Gaps = 176/477 (36%)

Query: 67  IRSHLRKLKPYQPI--------------------------LPFEVLSIQLGR--KPEDIV 98
           +R  L +L+P + +                          + F++  + L     PE ++
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 99  KI----------------DANENPYGPPPEVREALGQLKFPYIYP----------DPE-- 130
           ++                D + N       ++  L +L     Y           + +  
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259

Query: 131 ------------SR------RLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD 171
                       +R       L AA      +  DH  +    DE+  L+++ +   P D
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTH--ISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317

Query: 172 ---KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV------ELIADAVEREKP--- 219
              +++   P         ++   ++       D   +V       +I  ++   +P   
Sbjct: 318 LPREVLTTNP------RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY 371

Query: 220 -KC-----IFLTSPNNPDGSIINDEDLLKIL--EMP---ILVVLDEAYTEFSGLESRMEW 268
            K      +F      P  + I    LL ++  ++    ++VV+++ +  +S +E   + 
Sbjct: 372 RKMFDRLSVF------PPSAHI-PTILLSLIWFDVIKSDVMVVVNKLHK-YSLVE---KQ 420

Query: 269 VKK-----HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC 323
            K+         I L    K      L         SI+++       YN+    +    
Sbjct: 421 PKESTISIPS--IYLELKVKLENEYALHR-------SIVDH-------YNIPKTFDSDDL 464

Query: 324 AALQNPIY--------LEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFI---LCEVTS 372
                  Y        L+ ++     ER  LF+++    FL+       F+   +   ++
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHP---ERMTLFRMV----FLD-----FRFLEQKIRHDST 512

Query: 373 GMDAK-KLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEH-TDALMECLM----HLY 423
             +A   + + L +    ++ Y     K Y+  +  K E   +A+++ L     +L 
Sbjct: 513 AWNASGSILNTLQQ----LKFY-----KPYICDNDPKYERLVNAILDFLPKIEENLI 560

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 22/120 (18%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLG--RKPEDIVKIDANENPYGPPPEVREALGQLKF 122
           S I  HL+ ++  + +  F ++ +      +     KI  +   +     +   L QLKF
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ-----KIRHDSTAWNASGSILNTLQQLKF 529

Query: 123 --PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELI----DLIMRCVLDPGDKIVD 175
             PYI   DP+  RL  A+           L     + +     DL+   ++   + I +
Sbjct: 530 YKPYICDNDPKYERLVNAIL--------DFLPKIEENLICSKYTDLLRIALMAEDEAIFE 581

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 69/342 (20%), Positives = 137/342 (40%), Gaps = 53/342 (15%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
           P PE++EA+    +     Y Y + +   L  A+        D  +  + IL   G    
Sbjct: 75  PVPEIKEAIINYGREHIFGYNYFNDD---LYQAVIDWERKEHDYAVVKEDILFIDGVVPA 131

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I + ++   + GD ++   P +  Y F   +  N   +V+   +     F ++ E +   
Sbjct: 132 ISIALQAFSEKGDAVLINSPVY--YPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKD 189

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     K   L SP+NP G + +++DL+KI E+     +++V DE           +   
Sbjct: 190 IIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSL 249

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
           + L++  +     D  I+L + +K   +AG +  +            +Y   A   + V 
Sbjct: 250 NTLDASYK-----DFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVP 304

Query: 316 VAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVT 371
               +A  AA Q    +LE++K  +    + + K L+    +       +Y  ++     
Sbjct: 305 TVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY 364

Query: 372 SGMDAKKLKDDL---AKMGVMI-RHYNNKELKGYVRVSVGKP 409
             +   +L + L   AK+ +    H+  KE K + R++V  P
Sbjct: 365 -AIAQPQLSEKLQNEAKVVLNDGAHF-GKEGKYFARLNVATP 404

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 50.2 bits (121), Expect = 6e-07
 Identities = 67/353 (18%), Positives = 134/353 (37%), Gaps = 57/353 (16%)

Query: 109 PPPEVREALGQ-LKFP-YIYPDPESRRLRAALAK------DSGLESDHILVGCGADELID 160
             P + EAL Q L    + Y   ++    AA+A        + ++S  ++ G     ++ 
Sbjct: 42  TAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVS 101

Query: 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADAVE 215
            ++R   + G+ +V   P +    F  A+  N   V+ V  +     +  ++  +   + 
Sbjct: 102 ELIRQWSETGEGVVIHTPAY--DAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA 159

Query: 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEFSG 261
           + + K + L SP NP G +   ++L  + ++     + V+ DE           +  +S 
Sbjct: 160 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN 219

Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-----LSIIEYLWRAKQPYNVSV 316
           +           +  +L + SK   +  L   YG         + +  L       + SV
Sbjct: 220 V--------ARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSV 271

Query: 317 AAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKD-VPFLNPYP---SYSNFILCEV 370
            A  A  AA Q   P +L+ ++  L      +   +    P LN      +Y  ++    
Sbjct: 272 LALTAHIAAYQQGAP-WLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRP 330

Query: 371 TSGMDAKKLKDDL---AKMGVMI-RHYNNKELKGYVRVSVGKPEHTDALMECL 419
              +D   L+  L    K+ +M    Y  +E +G+VR++ G P     L + +
Sbjct: 331 L-NIDDNALQKALIEQEKVAIMPGYTY-GEEGRGFVRLNAGCPRSK--LEKGV 379

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 49.0 bits (118), Expect = 1e-06
 Identities = 60/343 (17%), Positives = 121/343 (35%), Gaps = 54/343 (15%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             PEV++A+    +     Y Y   E   L  A+            + + I+   G    
Sbjct: 45  VMPEVKQAIHDYAEQLVYGYTYASDE---LLQAVLDWEKSEHQYSFDKEDIVFVEGVVPA 101

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I + ++     G+ ++   P +    F  +V  N   +V    K +   F ++ E + + 
Sbjct: 102 ISIAIQAFTKEGEAVLINSPVY--PPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLEND 159

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     K   L +P+NP G +   E L +I  +     +++V DE           +  F
Sbjct: 160 IVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSF 219

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
           + +          D  +VL + +K   +AG +  Y         +  ++       + VS
Sbjct: 220 NTVSPDF-----KDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVS 274

Query: 316 VAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYP---SYSNFILCEV 370
               +A   A +    +L  +K  L +  +   +      P L       +Y  ++    
Sbjct: 275 SLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSD 334

Query: 371 TSGMDAKKLKDDL---AKMGVMI-RHYNNKELKGYVRVSVGKP 409
             G+    L   L   AK+ +     Y   E + + R+++  P
Sbjct: 335 Y-GLTDDALFTLLHDQAKVILNRGSDY-GSEGELHARLNIAAP 375

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 48.3 bits (116), Expect = 3e-06
 Identities = 56/353 (15%), Positives = 123/353 (34%), Gaps = 56/353 (15%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
            PPE+ E L + L      Y  P  E    +  + K         +++D I+   G    
Sbjct: 45  NPPELIEGLKKYLDETVLGYTGPTEE---YKKTVKKWMKDRHQWDIQTDWIINTAGVVPA 101

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           +   +R    PGD ++   P +  Y F  A+      +++         ++++ + +   
Sbjct: 102 VFNAVREFTKPGDGVIIITPVY--YPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKL 159

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
            + +  K +   SP+NP G +   ++L KI ++     +++  DE           +T F
Sbjct: 160 SKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVF 219

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
             ++ ++      D  I     SK   +AG+ +                   A      +
Sbjct: 220 QSIDEQL-----ADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFT 274

Query: 316 VAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYP---SYSNFILCEV 370
                A     +    +L+   + + K +  +    +   P +       +Y  +I    
Sbjct: 275 TLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRA 334

Query: 371 TSGMDAKKLKDDL---AKMGVMI-RHYNNKELKGYVRVSVGKPEHTDALMECL 419
              MD K +++ +   A++       +      G+ R+++  P     + E L
Sbjct: 335 L-KMDHKAMEEFMIHKAQIFFDEGYIF-GDGGIGFERINLAAPSSV--IQESL 383

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 47.9 bits (115), Expect = 4e-06
 Identities = 63/343 (18%), Positives = 126/343 (36%), Gaps = 54/343 (15%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             PE+  ++ + LK     Y     E      A+A        +  + D  +   G    
Sbjct: 41  IAPEIMASMEEKLKVAAFGYESVPAE---YYKAVADWEEIEHRARPKEDWCVFASGVVPA 97

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSD---FSLNVELIADA 213
           I  ++R    PGD+I+   P +    F + +  NG  V+      +   +S+N   + + 
Sbjct: 98  ISAMVRQFTSPGDQILVQEPVY--NMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEK 155

Query: 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE----------AYTEF 259
           +     + +   +P+NP G   ++E++ +I E+     +L++ DE            T  
Sbjct: 156 LATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPA 215

Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRAKQPYNVS 315
             ++   +     + ++ L + SK   LA L       P     +  E  +        +
Sbjct: 216 FTVDWDAK-----NWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPN 270

Query: 316 VAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYP---SYSNFILCEV 370
           + A  AA AA +    +L ++K+ L        + L   VP +       SY  ++    
Sbjct: 271 LLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISA 330

Query: 371 TSGMDAKKLKDDL---AKMGVMI-RHYNNKELKGYVRVSVGKP 409
             GM+A+     L     + +     Y       +VR+++  P
Sbjct: 331 L-GMNAEDFCKYLREKTGLIISAGNGY-RGNGHEFVRINLACP 371

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 46.7 bits (112), Expect = 7e-06
 Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 41/245 (16%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             P V +A+   ++     Y         L  A A+            + I         
Sbjct: 37  TCPAVLQAITDAVQREAFGYQPDGSL---LSQATAEFYADRYGYQARPEWIFPIPDVVRG 93

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVER 216
           + + +        K++   P +    F   +       + +       +N+  +     +
Sbjct: 94  LYIAIDHFTPAQSKVIVPTPAY--PPFFHLLSATQREGIFIDAT--GGINLHDVEKGF-Q 148

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE---------AYTEFSGLE 263
              + I L +P NP G +   E L ++ ++       V++DE          +T  +G+ 
Sbjct: 149 AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVS 208

Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEV 320
                       I +   SK   +AGL+     F        W+   P      S    +
Sbjct: 209 DTAA-----SVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLI 263

Query: 321 AACAA 325
           AA AA
Sbjct: 264 AAEAA 268

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 43.7 bits (104), Expect = 8e-05
 Identities = 56/350 (16%), Positives = 124/350 (35%), Gaps = 69/350 (19%)

Query: 109 PPPEVREALGQ-LKFP---YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
             P + ++L   L+     Y            ++        +  ++S+ ++   G    
Sbjct: 46  AAPCIIDSLKNRLEQEIYGYTTRPDS---YNESIVNWLYRRHNWKIKSEWLIYSPGVIPA 102

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRKS--------DFSLNVE 208
           I L++  +    DKI+   P +    F++ V  N   ++  P +         D+     
Sbjct: 103 ISLLINELTKANDKIMIQEPVY--SPFNSVVKNNNRELIISPLQKLENGNYIMDY----- 155

Query: 209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE-------- 254
              + +E   +  K   L +P+NP G +   ++L K+ ++     + ++ DE        
Sbjct: 156 ---EDIENKIKDVKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK 212

Query: 255 --AYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----LSIIEYLWRA 308
              +   + +           N I     +K   +AGL+  Y   P      +++  +  
Sbjct: 213 KHKHIPMASISKEF-----EKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTR 267

Query: 309 KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPYP---SYS 363
                 +  + VA  A+  N   +LE   E L    +   K + + +P L       +Y 
Sbjct: 268 IDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYL 327

Query: 364 NFILCEVTSGMDAKKLKDDL---AKMGVMI-RHYNNKELKGYVRVSVGKP 409
            ++      G+  ++L+  L    K+ +     +      GY R+++  P
Sbjct: 328 LWVDFSAL-GLSDEELESILVQKGKVALNQGNSF-GIGGSGYQRINLACP 375

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	423
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.98
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.98
1svv_A	359	Threonine aldolase; structural genomics, structura	99.98
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.97
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.97
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.97
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.97
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.97
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.97
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.97
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.97
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.97
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.97
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.97
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.97
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.97
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.97
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.97
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.97
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.97
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.97
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.97
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.97
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.97
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.97
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.97
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.97
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.96
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.96
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.96
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.96
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.96
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.96
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.96
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.96
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.96
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.96
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.96
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.96
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.96
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.96
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.96
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.96
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.96
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.96
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.96
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.96
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.96
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.96
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.96
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.96
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.96
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.96
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.96
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.96
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.95
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.95
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.95
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.95
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.95
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.95
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.95
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.95
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.95
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.95
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.95
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.95
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.94
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.94
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.94
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.94
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.94
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.93
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.93
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.93
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.93
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.93
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.93
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.93
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.93
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.93
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.92
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.92
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.91
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.91
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.91
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.91
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.9
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.84
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.9
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.88
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.88
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.87
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.86
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.86
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.85
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.82
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.72
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.67
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.67
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.62
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.62
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.53
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.4

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=2.2e-49  Score=384.98  Aligned_cols=350  Identities=31%  Similarity=0.469  Sum_probs=306.5

Q ss_pred             HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCC
Q 014492           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLES  146 (423)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~  146 (423)
                      ++.++.+.+|.+......+.+++|.  .++|+|+.|+++++++|++.+++.+. ....+||+.+..++|+++++++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~   84 (363)
T 3ffh_A            7 KKSLAGLSSYKPGKREEEVMAELGL--TKITKLSSNENPLGTSKKVAAIQANSSVETEIYPDGWASSLRKEVADFYQLEE   84 (363)
T ss_dssp             CGGGTTCCC----CHHHHHHHTTTC--SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC----CHHHHHHHHHHHTCCG
T ss_pred             hHHHHhCCCCCCCCCHHHHHHhcCC--CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHhCCCh
Confidence            5567778888777777777776765  57899999999999999999999874 44467888888999999999999999


Q ss_pred             CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS  226 (423)
Q Consensus       147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (423)
                      ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.++++.+|++++++.++ .++++|++++
T Consensus        85 ~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~  163 (363)
T 3ffh_A           85 EELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAID-EKTTIVWICN  163 (363)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCC-TTEEEEEEES
T ss_pred             hhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcc-cCCCEEEEeC
Confidence            999999999999999999999999999999999999999999999999999987788999999999997 6899999999


Q ss_pred             CCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       227 p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      |+||||.+++.+++.+|++.   |+++|+||+|.+|.++.  .........+++++++|+||.+|++|+|+||+++++++
T Consensus       164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  243 (363)
T 3ffh_A          164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI  243 (363)
T ss_dssp             SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHH
T ss_pred             CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHH
Confidence            99999999999999999986   89999999999887521  23344456789999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      ++.+.....+++.+.+++.++..+|++.+++++.+++++++++++.+.|+++.++.+.++.++|+|++++.  +..++.+
T Consensus       244 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~  321 (363)
T 3ffh_A          244 IRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGI--EAGTIFS  321 (363)
T ss_dssp             HHHHHHTCCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSS--CHHHHHH
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCCeEEEEECCC--CHHHHHH
Confidence            99999988899999999999999999888999999999999999999999955577778889999999974  7899999


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|.++||.++++..++.++++||++++.++++++.++|+++
T Consensus       322 ~l~~~gi~v~~g~~~~~~~~iRis~~~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          322 YLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALLEKL  362 (363)
T ss_dssp             HHHHTTEECEETTTTTCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             HHHHCCeEEEeCccCCCCCeEEEECCCHHHHHHHHHHHHHh
Confidence            99999999999887766899999999988889999988764

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=1e-49  Score=386.75  Aligned_cols=339  Identities=31%  Similarity=0.535  Sum_probs=293.2

Q ss_pred             hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCC
Q 014492           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE  145 (423)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~  145 (423)
                      ++++.+..+.+|.+....         ...++|+|+.|+|+++++|.+  +   +....+||+++..++|+++++++|++
T Consensus         9 ~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~~~~~~~~~~~v--a---~~~~~~Y~~~~~~~lr~~la~~~~~~   74 (356)
T 1fg7_A            9 LARENVRNLTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL--T---QQTLNRYPECQPKAVIENYAQYAGVK   74 (356)
T ss_dssp             HSCHHHHHCCCCCCCCCC---------TTTCSEECSSCCCSSCCCCCC--C---CCCTTSCCCSSCHHHHHHHHHHHTSC
T ss_pred             HhhHHHHhcCCCCCCccc---------CCCceEEeeCCCCCCCCCHhH--h---hhhhccCCCccHHHHHHHHHHHhCCC
Confidence            456777788887654321         124679999999999988876  2   23346798888899999999999999


Q ss_pred             CCcEEEeCCHHHHHHHHHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492          146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (423)
Q Consensus       146 ~~~i~~t~G~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (423)
                      +++|++|+|+++++..++++++++| |+|+++.|+|..|...++..|++++.+|.++++.+|++++++.++  ++++|++
T Consensus        75 ~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~--~~~~v~l  152 (356)
T 1fg7_A           75 PEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYV  152 (356)
T ss_dssp             GGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT--TEEEEEE
T ss_pred             hHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc--CCCEEEE
Confidence            9999999999999999999999999 999999999999999999999999999987778899999999886  7899999


Q ss_pred             cCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          225 TSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      ++||||||.+++.+++++|++.   |+++|+||+|.+|....+.....+..+++++++|+||.||++|+|+||+++++++
T Consensus       153 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  232 (356)
T 1fg7_A          153 CSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV  232 (356)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHH
T ss_pred             eCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHH
Confidence            9999999999999999998875   8999999999988732222333345688999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCcHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCCCCCHHH
Q 014492          302 IEYLWRAKQPYNVSVAAEVAACAALQNPIY--LEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSGMDAKK  378 (423)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~~~~~~~  378 (423)
                      ++.+.....+|+.|.++|.++.++|++.++  +++.+++++++++++.+.|++++.+ .+.|+.++|+|++++   +..+
T Consensus       233 ~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~---~~~~  309 (356)
T 1fg7_A          233 INLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK---ASSA  309 (356)
T ss_dssp             HHHHHHHSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET---THHH
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC---CHHH
Confidence            999999888899999999999999987655  8899999999999999999988743 456888999999996   6788


Q ss_pred             HHHHHHhCCcEEEe-CCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          379 LKDDLAKMGVMIRH-YNNKELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       379 l~~~L~~~gI~v~~-~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      +.+.|.++||.+++ +..++.++++||++++.++++++.++|++++
T Consensus       310 l~~~L~~~gI~v~~~g~~~~~~~~iRis~~~~~e~~~~~~~l~~~~  355 (356)
T 1fg7_A          310 VFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQ  355 (356)
T ss_dssp             HHHHHHHTTEECEECTTSTTCTTEEEEECCCHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHCCEEEEECCCCCCCCCeEEEEeCCHHHHHHHHHHHHhhc
Confidence            99999999999999 6656567899999999888999999988753

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=2.5e-49  Score=384.96  Aligned_cols=348  Identities=29%  Similarity=0.505  Sum_probs=311.0

Q ss_pred             HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCC
Q 014492           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES  146 (423)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~  146 (423)
                      ++.++.+.+|.+......++++++.  +++|+|+.|+++++++|.+.+++.+ +....+|+++...++|+++++++|+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~   82 (365)
T 3get_A            5 NEFLNNLSNYEPGKDIEVIAKEYGV--KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQN   82 (365)
T ss_dssp             CGGGGGSCCCCCCCCHHHHHHHTTC--SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHTCCG
T ss_pred             chhHhhcCCCCCCCCHHHHHHhcCC--CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHhCCCc
Confidence            4667788899888888888888776  6789999999999999999999987 344467877655899999999999999


Q ss_pred             CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcCCceEEEEc
Q 014492          147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       147 ~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      ++|++|+|+++++..++..++++||+|+++.|+|..+...++..|++++.+|. ++++ +|++++++.++ +++++|+++
T Consensus        83 ~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~  160 (365)
T 3get_A           83 ENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLC  160 (365)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEE
T ss_pred             ceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEc
Confidence            99999999999999999999999999999999999999999999999999997 6677 99999999997 789999999


Q ss_pred             CCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCcccc---CCC---chhhhhccCCcEEEEccChhhhcccCccccccc
Q 014492          226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFS---GLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (423)
Q Consensus       226 ~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~---~~~---~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~  296 (423)
                      +|+||||.+++.+++.+|++.   |+++|+||+|.++.   .+.   .........+++++++|+||.+|++|+|+||++
T Consensus       161 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  240 (365)
T 3get_A          161 LPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI  240 (365)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE
T ss_pred             CCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEE
Confidence            999999999999999999984   99999999999877   321   233344557899999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCH
Q 014492          297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDA  376 (423)
Q Consensus       297 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~  376 (423)
                      +++++++.+......++.+.+++.++..+|++.+++++.+++++++++++.+.|+++ ++.+.++.++|+|+++++. +.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~-~~  318 (365)
T 3get_A          241 ANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKIIDSYTNFITYFFDEK-NS  318 (365)
T ss_dssp             ECHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSEEEEECSSS-CH
T ss_pred             cCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCCCCeEEEEECCCC-CH
Confidence            999999999999888999999999999999998899999999999999999999988 4667788899999999855 88


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.+.|.++||.++++..++ ++++||++++.++++++.++|+++
T Consensus       319 ~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~~~~~i~~l~~~l~~~  363 (365)
T 3get_A          319 TDLSEKLLKKGIIIRNLKSYG-LNAIRITIGTSYENEKFFTEFDKI  363 (365)
T ss_dssp             HHHHHHHHTTTEECEECGGGT-CSEEEEECCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCEEEEECccCC-CCEEEEEcCCHHHHHHHHHHHHHH
Confidence            999999999999999987655 799999999988899999988764

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=1.2e-47  Score=371.33  Aligned_cols=326  Identities=25%  Similarity=0.388  Sum_probs=292.8

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd  171 (423)
                      .++++|+|+.|++++++++++.+++.+ +....+||+++..++|+++++++|+++++|++|+|+++++..+++.++++||
T Consensus        14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd   93 (354)
T 3ly1_A           14 STDNPIRINFNENPLGMSPKAQAAARDAVVKANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEA   93 (354)
T ss_dssp             CSSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTC
T ss_pred             CCCceEEccCCCCCCCCCHHHHHHHHHHHhhCcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCC
Confidence            456789999999999999999999987 3444778888889999999999999999999999999999999999999999


Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC---C
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM---P  247 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~  247 (423)
                      +|+++.|+|..+...++..|++++.+|.+.++.+|++++++.+++ +++++|++++|+||||.+++.+++.+|++.   |
T Consensus        94 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~  173 (354)
T 3ly1_A           94 QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPAN  173 (354)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTT
T ss_pred             eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCC
Confidence            999999999999999999999999999887889999999999975 589999999999999999999999999986   8


Q ss_pred             CEEEEccCCccccCCC---chhhhhccC-CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 014492          248 ILVVLDEAYTEFSGLE---SRMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC  323 (423)
Q Consensus       248 ~~li~Deay~~~~~~~---~~~~~~~~~-~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~  323 (423)
                      +++|+||+|.++.+.+   ......+.. +++++++|+||.+|++|+|+||+++++++++.+......++.+.+++.++.
T Consensus       174 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  253 (354)
T 3ly1_A          174 TMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGEKINFSGVDAAL  253 (354)
T ss_dssp             EEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTCSCCCHHHHHHHH
T ss_pred             eEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence            9999999999887654   333444455 889999999999999999999999999999999988888999999999999


Q ss_pred             HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014492          324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR  403 (423)
Q Consensus       324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iR  403 (423)
                      ++|++.+++++.+++++++++++.+.|++++ +.+.++.++|+|+++++  +..++.+.|.++||.++ +..+..++++|
T Consensus       254 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~~~~~iR  329 (354)
T 3ly1_A          254 ASMNDSAFITYSKKSNDVSRQILLKALEDLK-LPYLPSEGNFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPPADNWCR  329 (354)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECSS--CHHHHHHHHHHTTEECC-CCCTTCTTEEE
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeECCCCceEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCCCCCEEE
Confidence            9999988999999999999999999998874 55567889999999974  78899999999999998 65555788999


Q ss_pred             EEecChhhHHHHHHHHhhh
Q 014492          404 VSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       404 is~~~~~~~~~l~~al~~l  422 (423)
                      |++++.++++++.++|+++
T Consensus       330 is~~~~~~i~~~~~~l~~~  348 (354)
T 3ly1_A          330 ISLGTPQEMQWVADTMREF  348 (354)
T ss_dssp             EECCCHHHHHHHHHHHHHH
T ss_pred             EEcCCHHHHHHHHHHHHHH
Confidence            9999988888888888764

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=2.3e-47  Score=370.61  Aligned_cols=341  Identities=29%  Similarity=0.468  Sum_probs=297.6

Q ss_pred             hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHH
Q 014492           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF----PYIYPDPESRRLRAALAK  140 (423)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~  140 (423)
                      ++++.++.+.+|.+...        ...+.++|+|+.|+++++++|++.+++.+. ..    ..+|++++..++|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~--------~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~   76 (360)
T 3hdo_A            5 PLRQNIASMKGYIPGYQ--------PPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGE   76 (360)
T ss_dssp             CCCHHHHHCCCCCCCCC--------CSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHH
T ss_pred             hhHHHHHhcCCcCCCCC--------CccccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHH
Confidence            35677888888865432        123467899999999999999999999873 32    357888778999999999


Q ss_pred             HhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492          141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (423)
Q Consensus       141 ~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (423)
                      ++|+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.++++.+  +++++.   .+++
T Consensus        77 ~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~---~~~~  151 (360)
T 3hdo_A           77 LYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPER---YEGK  151 (360)
T ss_dssp             HHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSS---BCSS
T ss_pred             HhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhh---cCCC
Confidence            99999999999999999999999999999999999999999999999999999999998766555  444332   3577


Q ss_pred             EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          221 CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      ++++++|+||||.+++.+++.+|++. |+++|+||+|.+|... .........+++++++|+||.+|++|+|+||+++++
T Consensus       152 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  230 (360)
T 3hdo_A          152 VFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAES-NALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP  230 (360)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSC-CCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH
T ss_pred             EEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCc-chhHHhccCCCEEEEecchHhhcCCccceeeEeeCH
Confidence            99999999999999999999999987 9999999999988543 344444567899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492          300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       300 ~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l  379 (423)
                      ++++.+......++.+++++.++.++|++.+++++.+++++++++++.+.|+++ ++.+.++.++|+|++++ +.+..++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~-~~~~~~l  308 (360)
T 3hdo_A          231 EVIAALDKIRDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVIPSQGNYLFATPP-DRDGKRV  308 (360)
T ss_dssp             HHHHHHHHHSCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSSEEEEECT-TCCHHHH
T ss_pred             HHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEcCCCccEEEEECC-CCCHHHH
Confidence            999999998888999999999999999998889999999999999999999988 46677888999999987 5688999


Q ss_pred             HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.|.++||.+++++.+..++++||++++.+++++|.++|+.+
T Consensus       309 ~~~l~~~gi~v~~~~~~~~~~~iRis~~~~~e~~~l~~al~~~  351 (360)
T 3hdo_A          309 YDGLYARKVLVRHFSDPLLAHGMRISIGTREEMEQTLAALKEI  351 (360)
T ss_dssp             HHHHHHTTEECBCCCSTTTTTSEEEECCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCEEEEECCCCCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence            9999999999999876566789999999999999999999875

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=1.1e-46  Score=366.45  Aligned_cols=341  Identities=34%  Similarity=0.532  Sum_probs=300.3

Q ss_pred             hhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCcchHHHHHHHHHH
Q 014492           65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDPESRRLRAALAKD  141 (423)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~g~~~lr~~ia~~  141 (423)
                      .++++.+..+.+|.+.            .++++|+|+.|++++++++++.+++.+. .  ...+|++++..++|++++++
T Consensus        12 ~~~~~~~~~~~~~~~~------------~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~l~~~la~~   79 (367)
T 3euc_A           12 RIIRDDVRAMGAYHVP------------DSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEV   79 (367)
T ss_dssp             HHSCHHHHHSCCSSCC------------CCTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCC------------CCCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCcHHHHHHHHHHH
Confidence            4556777777777542            2357899999999999999999998762 2  23678888889999999999


Q ss_pred             hCC-CCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492          142 SGL-ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPK  220 (423)
Q Consensus       142 ~g~-~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (423)
                      +|+ ++++|++|+|+++++..+++.++++||+|+++.|+|..+...++..|++++.+|.+.++.+|++++++.+.+.+++
T Consensus        80 ~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~  159 (367)
T 3euc_A           80 MQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA  159 (367)
T ss_dssp             HTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred             hCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence            998 7889999999999999999999999999999999999999999999999999998888899999999999744899


Q ss_pred             EEEEcCCCCCcCcCCCHHHHHHHHcC------CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccc
Q 014492          221 CIFLTSPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~i~~~------~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      +|++++||||||.+++.+++++|++.      |+++|+||+|.+|... .....+...++++++.|+||. +++|+|+||
T Consensus       160 ~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~  237 (367)
T 3euc_A          160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE-SWMSRLTDFGNLLVMRTVSKL-GLAGIRLGY  237 (367)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC-CSGGGGGTCTTEEEEEECCCT-TSCSCCEEE
T ss_pred             EEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc-chHHHHhhCCCEEEEecchhh-cccccCcee
Confidence            99999999999999999988888652      5999999999988743 334455567899999999998 899999999


Q ss_pred             cccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC
Q 014492          295 GAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM  374 (423)
Q Consensus       295 i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~  374 (423)
                      +++++++++.+......++.+.+++.++..+|++.+++++.+++++++++++.+.|++++++.+.++.++|+|++++   
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~---  314 (367)
T 3euc_A          238 VAGDPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVP---  314 (367)
T ss_dssp             EEECHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCCSSSEEEEECS---
T ss_pred             eeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCeEEEEECC---
Confidence            99999999999888888999999999999999998889999999999999999999998767788899999999996   


Q ss_pred             CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          375 DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       375 ~~~~l~~~L~~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +..++.+.|.++||.++++..  ...++++||++++.++++++.++|+++
T Consensus       315 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~~~~~i~~~~~~l~~~  364 (367)
T 3euc_A          315 DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAAS  364 (367)
T ss_dssp             CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecCCHHHHHHHHHHHHHH
Confidence            788999999999999998775  334789999999988899999988764

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.2e-46  Score=359.89  Aligned_cols=318  Identities=26%  Similarity=0.359  Sum_probs=280.1

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd  171 (423)
                      ...++|+|+.|+|+++++|.+.+++.+. ....+||+++..++|+++++++|+++++|++|+|+++++.+++..+  +||
T Consensus        14 ~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd   91 (337)
T 3p1t_A           14 AAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSM   91 (337)
T ss_dssp             CCCCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTS
T ss_pred             CCCCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCC
Confidence            3467899999999999999999999873 3447788888999999999999999999999999999999999977  899


Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l  250 (423)
                      +|+++.|+|..+...++..|++++.+|.++++.+|++++++.   .+++++++++||||||.+++.+++.+|++. +. +
T Consensus        92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~  167 (337)
T 3p1t_A           92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGK-L  167 (337)
T ss_dssp             EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC---CTTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-E
T ss_pred             eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-E
Confidence            999999999999999999999999999888889999999876   368999999999999999999999999997 65 6


Q ss_pred             EEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH
Q 014492          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI  330 (423)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~  330 (423)
                      |+||+|.+|......  .....+++++++|+||.+|++|+|+||+++++++++.+.+....++.+.+++.++..+|++.+
T Consensus       168 ivDea~~~~~~~~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~  245 (337)
T 3p1t_A          168 LIDETYVDYSSFRAR--GLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQWFCNVGTLDLHALEAALDNDR  245 (337)
T ss_dssp             EEECTTGGGSSCSSS--CCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHH
T ss_pred             EEECCChhhcccccc--ccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHH
Confidence            779999987754321  123457889999999999999999999999999999998888888999999999999999877


Q ss_pred             HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChh
Q 014492          331 YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPE  410 (423)
Q Consensus       331 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~  410 (423)
                      ++++.++++.++++++.+.|++++ +.+.++.++|+|+..+   +..++.+.|.++||.++++..+..++++||++++.+
T Consensus       246 ~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~~~~  321 (337)
T 3p1t_A          246 AREAHIAKTLAQRRRVADALRGLG-YRVASSEANFVLVENA---AGERTLRFLRERGIQVKDAGQFGLHHHIRISIGREE  321 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSSEEEEECT---TTHHHHHHHHHTTEECEEGGGGTCCSEEEEECCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCc-CEECCCCCeEEEEEcC---CHHHHHHHHHHCCeEEEECccCCCCCeEEEecCCHH
Confidence            777888888889999999999885 5666778889998886   346788888899999999887666899999999988


Q ss_pred             hHHHHHHHHhhh
Q 014492          411 HTDALMECLMHL  422 (423)
Q Consensus       411 ~~~~l~~al~~l  422 (423)
                      ++++|.++|+++
T Consensus       322 ~~~~l~~al~~~  333 (337)
T 3p1t_A          322 DNDRLLAALAEY  333 (337)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999876

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=5.4e-46  Score=361.45  Aligned_cols=344  Identities=26%  Similarity=0.384  Sum_probs=290.2

Q ss_pred             cCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEe
Q 014492           74 LKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVG  152 (423)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t  152 (423)
                      +.+|.++..+..++.+++.+++++|+|+.|++++++++++.+++.+. ....+|++.+..++|+++++++++++++|++|
T Consensus         3 ~~~~~~g~~~~~~~~~~~~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~v~~~   82 (364)
T 1lc5_A            3 LFNTAHGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAG   82 (364)
T ss_dssp             CCCCSSSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEE
T ss_pred             CcccCCCccHHHHHHhcCCCccceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHCcCHHHEEEC
Confidence            34455555566667778877778999999999999999999998873 33367887788999999999999988999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC-HHHHHHHhhcCCceEEEEcCCCCCc
Q 014492          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-VELIADAVEREKPKCIFLTSPNNPD  231 (423)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~~~l~~~i~~~~~~~i~l~~p~NPt  231 (423)
                      +|+++++..+++.+  +||+|+++.|+|..+...++..|++++.+|.+.+.+++ ++++.+.+. .+++++++++|+|||
T Consensus        83 ~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~-~~~~~v~i~~p~npt  159 (364)
T 1lc5_A           83 NGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPT  159 (364)
T ss_dssp             SSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCC-TTCCEEEEESSCTTT
T ss_pred             CCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhcc-CCCCEEEEeCCCCCC
Confidence            99999999999988  78999999999999999999999999999975422333 466666664 678999999999999


Q ss_pred             CcCCCHHHHHHHHc---C-CCEEEEccCCccccCCC-chhhhhccCCcEEEEccChhhhcccCccccccc-cCHHHHHHH
Q 014492          232 GSIINDEDLLKILE---M-PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYL  305 (423)
Q Consensus       232 G~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~-~~~~~~~~l  305 (423)
                      |.+++.+++++|++   . |+++|+||+|.++.+++ ......+..+++++++|+||.+|++|+|+||++ +++++++.+
T Consensus       160 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l  239 (364)
T 1lc5_A          160 GLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARM  239 (364)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHH
Confidence            99999766666655   3 99999999999887643 233334456789999999999999999999999 999999999


Q ss_pred             HHhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014492          306 WRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK  385 (423)
Q Consensus       306 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~  385 (423)
                      ......++.+++++.++.++|++.+++++.+++++++++++.+.|++++++.+.++.++|+|+++++  +..++.+.|.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~--~~~~l~~~l~~  317 (364)
T 1lc5_A          240 RRQQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCER--EDIDLQRRLLT  317 (364)
T ss_dssp             HHHSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESC--TTCCHHHHHHT
T ss_pred             HHhCCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCC--cHHHHHHHHHH
Confidence            8888889999999999999999888899999999999999999999886677778889999999974  34578899999


Q ss_pred             CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +||.++++..+  ..++++||+++..++++++.++++++
T Consensus       318 ~gi~v~~g~~~~~~~~~~iRis~~~~~~~~~l~~~l~~~  356 (364)
T 1lc5_A          318 QRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNV  356 (364)
T ss_dssp             TTEECEECTTSTTCCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CCcEEeeCcccCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence            99999998763  23689999999988888999999875

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=1.5e-46  Score=368.19  Aligned_cols=326  Identities=24%  Similarity=0.362  Sum_probs=274.2

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM  163 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+.++|+|+.|++++++++.+.+++.+. . ....|++. |..++|+++++++    |  +++++|++|+|+++++.+++
T Consensus        29 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~  108 (385)
T 1b5p_A           29 QGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLF  108 (385)
T ss_dssp             TTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHH
T ss_pred             cCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHH
Confidence            3467899999999999899998887652 2 22568654 7899999999987    4  46789999999999999999


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++++++||+|+++.|+|..|...++..|++++.+|.+  +++.+|++++++.+. .++++|++++||||||.+++.++++
T Consensus       109 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~NPtG~~~~~~~l~  187 (385)
T 1b5p_A          109 QAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNPTGAVYPKEVLE  187 (385)
T ss_dssp             HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcC-CCCEEEEEeCCCCCCCCCcCHHHHH
Confidence            9999999999999999999999999999999999976  367899999999996 5799999999999999999988887


Q ss_pred             HHHcC----CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492          242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (423)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~  313 (423)
                      +|++.    |++||+||+|.++.+++.  ....+.. +++++++||||.||++|+|+||+++++++++.+.+....  ++
T Consensus       188 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~  266 (385)
T 1b5p_A          188 ALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTS  266 (385)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCC
Confidence            77664    999999999999876431  1222323 789999999999999999999999999999988876543  57


Q ss_pred             CcHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC-CCCCHHHHHHHHHhCCc
Q 014492          314 VSVAAEVAACAALQN----PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGV  388 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~-~~~~~~~l~~~L~~~gI  388 (423)
                      ++.++|.++.++|+.    .+++++.+++++++++++.+.|+++++....|.+++|+|++++ .+.+..++.+.|.++||
T Consensus       267 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv  346 (385)
T 1b5p_A          267 PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGV  346 (385)
T ss_dssp             CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTE
T ss_pred             CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCe
Confidence            889999999999965    5678889999999999999999887432234667789999986 25688999999999999


Q ss_pred             EEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          389 MIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++++..++.++++||+++..+  +++.+++++|
T Consensus       347 ~v~~g~~f~~~~~iRis~~~~~--~~i~~~l~~l  378 (385)
T 1b5p_A          347 AVVPGTDFAAFGHVRLSYATSE--ENLRKALERF  378 (385)
T ss_dssp             ECEESGGGTCTTEEEEECCSCH--HHHHHHHHHG
T ss_pred             EEecccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            9999876555789999999543  6688888876

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=1.6e-45  Score=357.17  Aligned_cols=323  Identities=27%  Similarity=0.499  Sum_probs=285.6

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD  171 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd  171 (423)
                      .++++|||+.|+++++++|++.+++.+ +....+||+.+..++|+++++++++++++|++|+|+++++..+++.+    |
T Consensus        24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d   99 (361)
T 3ftb_A           24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----E   99 (361)
T ss_dssp             ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----S
T ss_pred             CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----C
Confidence            457789999999999999999988876 33346788888899999999999999999999999999999999976    8


Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----C
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P  247 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~  247 (423)
                      +|+++.|+|..+...++..|++++.+|.+.+..++++++++.++ . ++++++++|+||||.+++.+++++|++.    |
T Consensus       100 ~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~-~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  177 (361)
T 3ftb_A          100 KILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKID-D-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK  177 (361)
T ss_dssp             EEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTT-T-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred             cEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhcc-C-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcC
Confidence            99999999999999999999999999987767889999999997 4 9999999999999999999998888873    9


Q ss_pred             CEEEEccCCccccCC--CchhhhhccCCcEEEEccChhhhcccCccccccc-cCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014492          248 ILVVLDEAYTEFSGL--ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQPYNVSVAAEVAACA  324 (423)
Q Consensus       248 ~~li~Deay~~~~~~--~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~-~~~~~~~~l~~~~~~~~~~~~~~~a~~~  324 (423)
                      +++|+||+|.++..+  ..........+++++++|+||.+|++|+|+||++ .++++++.+......++.+++++.++.+
T Consensus       178 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (361)
T 3ftb_A          178 KTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN  257 (361)
T ss_dssp             CEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred             CEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence            999999999988864  2333444457889999999999999999999998 8999999999888889999999999999


Q ss_pred             HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--CCCCe
Q 014492          325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--ELKGY  401 (423)
Q Consensus       325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--~~~~~  401 (423)
                      +|++.+++++.+++++++++++.+.|++++++. +.++.++|+|+++++ .+..++.+.|.++||.++++..+  ..+++
T Consensus       258 ~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~  336 (361)
T 3ftb_A          258 CLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFIGLDDSF  336 (361)
T ss_dssp             TSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS-SCHHHHHHHHHTTTEECEECTTSTTCCTTE
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCCCCCCCE
Confidence            999988999999999999999999999998777 778889999999984 68899999999889999998763  34689


Q ss_pred             EEEEecChhhHHHHHHHHhhh
Q 014492          402 VRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       402 iRis~~~~~~~~~l~~al~~l  422 (423)
                      +||++++.++++++.++++++
T Consensus       337 iRis~~~~~~~~~l~~~l~~~  357 (361)
T 3ftb_A          337 VRFAIKDEKKNTKFLRALKGV  357 (361)
T ss_dssp             EEEECCCHHHHHHHHHHHHHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHH
Confidence            999999988889999999876

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=3.7e-45  Score=353.60  Aligned_cols=316  Identities=24%  Similarity=0.377  Sum_probs=274.0

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~  172 (423)
                      ++++|||+.|+++++++|++.+++.+. ....+|+++...++|+++++++++++++|++|+|+++++.++++.++  ||+
T Consensus        14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~   91 (350)
T 3fkd_A           14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSR   91 (350)
T ss_dssp             --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCE
T ss_pred             cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCE
Confidence            467899999999999999999998873 33367877655899999999999999999999999999999999887  999


Q ss_pred             EEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCE
Q 014492          173 IVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PIL  249 (423)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~  249 (423)
                      |+++.|+|..+...++..|++++.+|. ++..++++         .++++|++++|+||||.+++.+++.+|++.  ..+
T Consensus        92 Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~---------~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~  162 (350)
T 3fkd_A           92 SLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF---------SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTT  162 (350)
T ss_dssp             EEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC---------TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSE
T ss_pred             EEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc---------CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCE
Confidence            999999999999999999999999997 54344443         578999999999999999999999999986  479


Q ss_pred             EEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC
Q 014492          250 VVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN  328 (423)
Q Consensus       250 li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~  328 (423)
                      ||+||+|.++.+.+. .....+..+++++++||||.+|++|+|+||+++++++++.+......++++.+++.++..+|++
T Consensus       163 li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  242 (350)
T 3fkd_A          163 FVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILIH  242 (350)
T ss_dssp             EEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHHC
T ss_pred             EEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCCCCCCHHHHHHHHHHHhC
Confidence            999999998876443 2334456789999999999999999999999999999999999888899999999999999987


Q ss_pred             hH-HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCC--CCCCeEEE
Q 014492          329 PI-YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNK--ELKGYVRV  404 (423)
Q Consensus       329 ~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~--~~~~~iRi  404 (423)
                      .+ |.++.++.. ++++++.+.|++++++.+.++.++|+|++++.. +..++.+.|.+ +||.++++..+  ..++++||
T Consensus       243 ~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRi  320 (350)
T 3fkd_A          243 PAQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSGTTFFLLRLKKG-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRI  320 (350)
T ss_dssp             TTTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCSSSEEEEEESSS-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEE
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCCCcEEEEECCCC-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEE
Confidence            65 555555554 889999999998877778888999999999865 88999999997 99999998764  33789999


Q ss_pred             EecChhhHHHHHHHHhhh
Q 014492          405 SVGKPEHTDALMECLMHL  422 (423)
Q Consensus       405 s~~~~~~~~~l~~al~~l  422 (423)
                      ++++.+++++|.++|+++
T Consensus       321 s~~~~~~~~~l~~al~~~  338 (350)
T 3fkd_A          321 TTQRPAQNQLFIKALETF  338 (350)
T ss_dssp             ECCCHHHHHHHHHHHHHH
T ss_pred             EcCCHHHHHHHHHHHHHH
Confidence            999988889999999876

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=3.1e-45  Score=352.13  Aligned_cols=309  Identities=30%  Similarity=0.469  Sum_probs=270.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCCcchHHHHHHHHHHhC---CCCCcEEEeCCHHHHHHHHHHHhcC
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLK---FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCVLD  168 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~~~g~~~lr~~ia~~~g---~~~~~i~~t~G~~~al~~~~~~l~~  168 (423)
                      .++++|+.|++++++++++.+++.+..   ..++|++.+..++|++++++++   +++++|++|+|+++++..+++.+  
T Consensus        19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~--   96 (335)
T 1uu1_A           19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF--   96 (335)
T ss_dssp             CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--
T ss_pred             CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--
Confidence            467999999999999999999998732   2356887778999999999999   88899999999999999999977  


Q ss_pred             CCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C
Q 014492          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (423)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~  247 (423)
                       ||+|+++ |+|..+...++..|++++.+|.++++.+|++++      .++++|++++||||||.+++.+++.+|++. |
T Consensus        97 -gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~  168 (335)
T 1uu1_A           97 -DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV------GEGDVVFIPNPNNPTGHVFEREEIERILKTGA  168 (335)
T ss_dssp             -SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC------CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC
T ss_pred             -CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence             8999999 999999999999999999999877778888776      478999999999999999999999999998 9


Q ss_pred             CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHHHhC
Q 014492          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ  327 (423)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~  327 (423)
                       ++|+||+|.++... .....++..+++++++|+||.+|++|+|+||+++++++++.+......++.+.+++.++.++|+
T Consensus       169 -~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  246 (335)
T 1uu1_A          169 -FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALD  246 (335)
T ss_dssp             -EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHH
T ss_pred             -EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCCCCcCHHHHHHHHHHhC
Confidence             99999999987643 3333345577899999999999999999999999999999998888889999999999999999


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG  407 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~  407 (423)
                      +.+++++.+++++++++++.+.|++++ +.+.|++++|+|+++++ .+..++.+.|.++||.++++     ++++||+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~-----~~~iRis~~  319 (335)
T 1uu1_A          247 HREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFVFMEK-EEKERLLEHLRTKNVAVRSF-----REGVRITIG  319 (335)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCCSSEEEEECCT-HHHHHHHHHHHHHTEEEEEE-----TTEEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCC-cEEcCCCCeEEEEECCC-CCHHHHHHHHHHCCEEEEEC-----CCeEEEEeC
Confidence            877889999999999999999998874 45567889999999974 46778999999999999982     579999999


Q ss_pred             ChhhHHHHHHHHhhh
Q 014492          408 KPEHTDALMECLMHL  422 (423)
Q Consensus       408 ~~~~~~~l~~al~~l  422 (423)
                      ..++++++.++|+++
T Consensus       320 ~~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          320 KREENDMILRELEVF  334 (335)
T ss_dssp             CHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHhh
Confidence            887777777777653

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=1.7e-44  Score=351.58  Aligned_cols=319  Identities=28%  Similarity=0.473  Sum_probs=279.4

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHH------hCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           98 VKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~------~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      |||+.|++++++++++.+++.+. .    ...+|++....++|++++++      +++++++|++|+|+++++..+++++
T Consensus        33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l  112 (369)
T 3cq5_A           33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF  112 (369)
T ss_dssp             EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred             eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHh
Confidence            99999999999999999888762 1    13678766447999999999      5667889999999999999999999


Q ss_pred             cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (423)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~  246 (423)
                      +++||+|+++.|+|+.+...++..|++++.+|.++++.+|++++++.+.+.++++|++++|+||||.+++.+++.+|++.
T Consensus       113 ~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~  192 (369)
T 3cq5_A          113 GGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV  192 (369)
T ss_dssp             CSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             cCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence            99999999999999999999999999999999877788999999999974379999999999999999999999999997


Q ss_pred             -CCEEEEccCCccccCCCchhhhhccCC-cEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHHH
Q 014492          247 -PILVVLDEAYTEFSGLESRMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACA  324 (423)
Q Consensus       247 -~~~li~Deay~~~~~~~~~~~~~~~~~-~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~~  324 (423)
                       ++++|+||+|.++....+.....+..+ +++++.|+||.+|++|+|+||+++++++++.+......++.+.+.+.++.+
T Consensus       193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~  272 (369)
T 3cq5_A          193 APGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIV  272 (369)
T ss_dssp             CSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred             CCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence             899999999998875433333334456 899999999999999999999999999999998888888999999999999


Q ss_pred             HhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014492          325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV  404 (423)
Q Consensus       325 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi  404 (423)
                      +|++.+++++.+++++++++++.+.|++.+ +.+.++.++|+|++++  .+..++.+.|.++||.+++++   .++++||
T Consensus       273 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~~~---~~~~iRi  346 (369)
T 3cq5_A          273 ALRHSADTLGTVEKLSVERVRVAARLEELG-YAVVPSESNFVFFGDF--SDQHAAWQAFLDRGVLIRDVG---IAGHLRT  346 (369)
T ss_dssp             HHHTHHHHHTHHHHHHHHHHHHHHHHHHHT-CEEECCSSSEEEEECC--SSHHHHHHHHHHTTEECBCCS---CTTEEEE
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCCCeEEEEECC--CCHHHHHHHHHHCCEEEEECC---CCCeEEE
Confidence            998888889999999999999999998764 5556788899999986  578899999999999999872   3689999


Q ss_pred             EecChhhHHHHHHHHhhh
Q 014492          405 SVGKPEHTDALMECLMHL  422 (423)
Q Consensus       405 s~~~~~~~~~l~~al~~l  422 (423)
                      ++++.++++++.++|+++
T Consensus       347 s~~~~~~i~~~~~~l~~~  364 (369)
T 3cq5_A          347 TIGVPEENDAFLDAAAEI  364 (369)
T ss_dssp             ECCCHHHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHH
Confidence            999888888888888764

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=1.8e-44  Score=354.04  Aligned_cols=334  Identities=20%  Similarity=0.263  Sum_probs=275.5

Q ss_pred             hHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHhC------CCCCcEEEeC
Q 014492           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDSG------LESDHILVGC  153 (423)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~g------~~~~~i~~t~  153 (423)
                      +...+.++...++++|+|+.|+++++++|++.+++.+. . ...+|++. |..++|++++++++      +++++|++|+
T Consensus        19 ~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~   98 (391)
T 3h14_A           19 VMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITP   98 (391)
T ss_dssp             HHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred             HHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEec
Confidence            33345555556778999999999999999999998873 2 23567654 68999999999974      6789999999


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (423)
Q Consensus       154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (423)
                      |+++++..++++++++||+|+++.|+|..+...++..|++++.+|.+.  ++.+|++++++.    ++++|++++|+|||
T Consensus        99 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~----~~~~v~i~~p~npt  174 (391)
T 3h14_A           99 GSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL----DLAGLMVASPANPT  174 (391)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS----CCSEEEEESSCTTT
T ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc----CCeEEEECCCCCCC
Confidence            999999999999999999999999999999999999999999999753  467899999876    78999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~  307 (423)
                      |.+++.+++++|++.    |+++|+||+|.++.+++.........+++++++|+||.+|++|+|+||+++++++++.+.+
T Consensus       175 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~  254 (391)
T 3h14_A          175 GTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVER  254 (391)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHH
Confidence            999998877777653    9999999999998865543333334678899999999999999999999999999988876


Q ss_pred             hcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHH
Q 014492          308 AKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDL  383 (423)
Q Consensus       308 ~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L  383 (423)
                      ...  .++.+.+++.++.++++..+++++.+++++++++++.+.|+++++... .|.+++|+|++++. +.+..++.+.|
T Consensus       255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  334 (391)
T 3h14_A          255 IAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI  334 (391)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHH
T ss_pred             HHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHH
Confidence            654  467899999999999988888999999999999999999998876553 56677899999986 57899999998


Q ss_pred             Hh-CCcEEEeCCCCC---CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          384 AK-MGVMIRHYNNKE---LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~~-~gI~v~~~~~~~---~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++ +||.++++..+.   .++++||+++..+  +++.+++++|
T Consensus       335 ~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~--~~i~~~l~~l  375 (391)
T 3h14_A          335 LEKAGVAVTPGLDFDPERGAGTLRFSYARAT--ADIEEGLDRL  375 (391)
T ss_dssp             HHHHCEECEEGGGTCTTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHCCEEEcCchhhCCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            75 599999987643   3679999998743  6677777665

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=1.5e-44  Score=355.04  Aligned_cols=326  Identities=21%  Similarity=0.293  Sum_probs=274.0

Q ss_pred             CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----C---CCCC-cEEEeCCHHHHHHH
Q 014492           92 RKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDL  161 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g---~~~~-~i~~t~G~~~al~~  161 (423)
                      .+++++|+|+.|+++++++|.+.+++.+. ....+|++. |..++|+++++++    |   ++++ +|++|+|+++++..
T Consensus        27 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~  106 (396)
T 3jtx_A           27 PEGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFS  106 (396)
T ss_dssp             CTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHH
T ss_pred             ccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHH
Confidence            34678999999999999999999999873 333678664 6889999999886    6   4588 99999999999999


Q ss_pred             HHHHhcCCC-----CeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      +++.++++|     |+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++++. .++++|++++||||||.++
T Consensus       107 ~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~-~~~~~v~l~~p~nptG~~~  185 (396)
T 3jtx_A          107 FVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVW-KRTKLVFVCSPNNPSGSVL  185 (396)
T ss_dssp             HHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HTEEEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhc-cCcEEEEEECCCCCCCCcC
Confidence            999999997     799999999999999999999999999973 456789999999997 4899999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCC-chhhhh-------ccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWV-------KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~-~~~~~~-------~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      +.+++++|++.    |+++|+||+|.++.+.+ ......       ...++++++.|+||.|+++|+|+||+++++++++
T Consensus       186 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (396)
T 3jtx_A          186 DLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLK  265 (396)
T ss_dssp             CHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHH
Confidence            99997777664    99999999999987654 222211       1368899999999999999999999999999999


Q ss_pred             HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          304 YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       304 ~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                      .+.....  .++.+.+++.++..+|++.+++++.+++++++++++.+.|+++. ....|.+++|+|++++. .+..++.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~  343 (396)
T 3jtx_A          266 NFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVF-DVKLPDASFYIWLKVPD-GDDLAFAR  343 (396)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTS-CCCCCSSSSEEEEECTT-SCHHHHHH
T ss_pred             HHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCCeeEEEEEECCC-CCHHHHHH
Confidence            8887654  47889999999999999888999999999999999999998862 22356788999999974 57889999


Q ss_pred             HHH-hCCcEEEeCCCC--------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLA-KMGVMIRHYNNK--------ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~-~~gI~v~~~~~~--------~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|. ++||.+.++..+        ...+++||+++..  .+++.+++++|
T Consensus       344 ~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l  391 (396)
T 3jtx_A          344 NLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVAD--VATCVKAAEDI  391 (396)
T ss_dssp             HHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence            986 679999987653        2468999999863  36677777765

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=6e-44  Score=348.43  Aligned_cols=326  Identities=18%  Similarity=0.255  Sum_probs=274.3

Q ss_pred             CCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCCCc-chHHHHHHHHHHh----CCC--CC-cEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYPDP-ESRRLRAALAKDS----GLE--SD-HILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~Y~~~-g~~~lr~~ia~~~----g~~--~~-~i~~t~G~~~al~  160 (423)
                      .++.++|+|+.|+++++++|.+.+++.+. ..  .++|++. +..++|+++++++    |++  ++ +|++|+|+++++.
T Consensus        22 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~  101 (376)
T 2dou_A           22 ERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA  101 (376)
T ss_dssp             HTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred             ccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence            34567899999999999999999998763 22  3678774 7889999999998    864  45 9999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      .++++++++||+|+++.|+|..+...++..|++++.+|.++++.+|++++++.+. .++++|++++||||||.+++.+++
T Consensus       102 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l  180 (376)
T 2dou_A          102 HLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVW-REAKVLLLNYPNNPTGAVADWGYF  180 (376)
T ss_dssp             HHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHH
T ss_pred             HHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhc-cCceEEEECCCCCCcCccCCHHHH
Confidence            9999999999999999999999999999999999999986666789999999886 578999999999999999998887


Q ss_pred             HHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--
Q 014492          241 LKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--  311 (423)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--  311 (423)
                      ++|++.    |+++|+||+|.++.+++.   .....+..+++++++|+||.+|++|+|+||+++++++++.+......  
T Consensus       181 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~  260 (376)
T 2dou_A          181 EEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVID  260 (376)
T ss_dssp             HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcc
Confidence            776653    999999999999876432   22222335789999999999999999999999999999988765543  


Q ss_pred             CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                      ++.+.+++.++.++|++ .+++++.+++++++++++.+.|+++  +.+. +.+++|+|++++++.+..++.+.|.++||.
T Consensus       261 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~  338 (376)
T 2dou_A          261 FNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEGVDDLEFGLRLVERGVA  338 (376)
T ss_dssp             CCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTTCCHHHHHHHHHHTTEE
T ss_pred             cCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCCCCHHHHHHHHHHCCEE
Confidence            56789999999999988 6788999999999999999999987  4443 556789999998777888999999988999


Q ss_pred             EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++++..+.  .++++||+++..  .+++.+++++|
T Consensus       339 v~~g~~f~~~~~~~~Ris~~~~--~~~i~~~l~~l  371 (376)
T 2dou_A          339 LAPGRGFGPGGKGFVRIALVRP--LEELLEAAKRI  371 (376)
T ss_dssp             CEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             EcCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            99876533  368999999863  36677777665

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=8.6e-44  Score=347.14  Aligned_cols=318  Identities=21%  Similarity=0.250  Sum_probs=268.5

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----g~--~~~~i~~t~G~~~al~~~~~  164 (423)
                      .+ ++|+|+.|++++++++.+.+++.+. .....|++. +..++|+++++++    |+  ++++|++|+|+++++..+++
T Consensus        22 ~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~  100 (376)
T 3ezs_A           22 KK-RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPS  100 (376)
T ss_dssp             SS-CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHH
T ss_pred             cC-CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHH
Confidence            44 8899999999999999999999874 333678664 6889999999987    76  78999999999999999999


Q ss_pred             HhcCC--CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          165 CVLDP--GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       165 ~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      .++++  ||+|+++.|+|..+...++..|++++.+|.+++.++++ ++++.+. .++++|++++||||||.+++.+++++
T Consensus       101 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~v~~~~p~nptG~~~~~~~l~~  178 (376)
T 3ezs_A          101 FVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKEL-QEVDLVILNSPNNPTGRTLSLEELIS  178 (376)
T ss_dssp             HHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHH-HHCSEEEECSSCTTTCCCCCHHHHHH
T ss_pred             HHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhc-cCCCEEEEcCCCCCcCCCCCHHHHHH
Confidence            99999  99999999999999999999999999999765445555 6666665 47899999999999999999999888


Q ss_pred             HHcC----CCEEEEccCCccccCCCchhhh---hc-----cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC
Q 014492          243 ILEM----PILVVLDEAYTEFSGLESRMEW---VK-----KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ  310 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~~~~---~~-----~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~  310 (423)
                      |++.    |+++|+||+|.++.+++.....   ..     ..+++++++|+||.+|++|+|+||+++++++++.+.....
T Consensus       179 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~  258 (376)
T 3ezs_A          179 WVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRA  258 (376)
T ss_dssp             HHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHh
Confidence            8663    9999999999998865432222   21     5789999999999999999999999999999999987765


Q ss_pred             --CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh-CC
Q 014492          311 --PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK-MG  387 (423)
Q Consensus       311 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~-~g  387 (423)
                        .++.+.+++.++.+++++.+++++.+++++++++++.+.|+  + +. .|+.++|+|++++   +..++.+.|.+ +|
T Consensus       259 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~--~-~~-~~~~~~~~~~~~~---~~~~~~~~l~~~~g  331 (376)
T 3ezs_A          259 YLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK--N-TL-IYPYSFYVYLPVQ---NGENFAKTLYQNEG  331 (376)
T ss_dssp             TTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST--T-CC-CCSBSSEEEEECS---CHHHHHHHHHHHHC
T ss_pred             hhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc--C-CC-CCCcceEEEEECC---CHHHHHHHHHHhCC
Confidence              47889999999999999888899999999999999999998  3 33 6788999999997   68899999986 89


Q ss_pred             cEEEeCCCCC----CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNKE----LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~~----~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++++..+.    .++++||+++..  .+++.+++++|
T Consensus       332 i~v~~g~~~~~~~~~~~~iRis~~~~--~~~i~~~l~~l  368 (376)
T 3ezs_A          332 IITLPALYLGRNRIGADYVRLALVYD--TPLLEKPLEII  368 (376)
T ss_dssp             CBCEEGGGGCSTTTTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             EEEeCcHHhCCCCCCCCeEEEEEcCC--HHHHHHHHHHH
Confidence            9999876532    578999999752  25555555544

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.8e-43  Score=349.51  Aligned_cols=333  Identities=22%  Similarity=0.304  Sum_probs=270.4

Q ss_pred             HHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCC-CcchHHHHHHHHHHh----CC--CC-CcEEEeCCH
Q 014492           87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYP-DPESRRLRAALAKDS----GL--ES-DHILVGCGA  155 (423)
Q Consensus        87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~Y~-~~g~~~lr~~ia~~~----g~--~~-~~i~~t~G~  155 (423)
                      ..+++..+.++|+|+.|++++++++.+.+++.+. ..  .++|+ ..+..++|+++++++    |+  ++ ++|++|+|+
T Consensus        29 ~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~  108 (412)
T 2x5d_A           29 KMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGS  108 (412)
T ss_dssp             HHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCH
T ss_pred             HHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCCh
Confidence            3444455678999999999999999999998873 22  24684 567899999999998    74  66 699999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       156 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      ++++..+++.++++||+|+++.|+|+.+...++..|++++.+|.++  ++.+|++++++.+. .++++|++++||||||.
T Consensus       109 ~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~l~~p~nptG~  187 (412)
T 2x5d_A          109 KEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI-PKPRMMILGFPSNPTAQ  187 (412)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE-SCCSEEEEESSCTTTCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc-cCceEEEECCCCCCCCC
Confidence            9999999999999999999999999999999999999999999754  34478999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHH
Q 014492          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (423)
Q Consensus       234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l  305 (423)
                      +++.+++++|++.    |+++|+||+|.++.+.+.   ....+. ..+++++++|+||.+|++|+|+||+++++++++.+
T Consensus       188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l  267 (412)
T 2x5d_A          188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSAL  267 (412)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHH
Confidence            9998877777654    999999999999875331   122222 25789999999999999999999999999999988


Q ss_pred             HHhcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCC---CHHHH
Q 014492          306 WRAKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGM---DAKKL  379 (423)
Q Consensus       306 ~~~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~---~~~~l  379 (423)
                      .....  .++.+.+++.++..+|+. .+++++.+++++++++++.+.|++++.....+.+++|+|++++.+.   +..++
T Consensus       268 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~  347 (412)
T 2x5d_A          268 ARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEF  347 (412)
T ss_dssp             HHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHH
T ss_pred             HHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHH
Confidence            76544  478899999999999986 5788999999999999999999887432234555779999997665   78899


Q ss_pred             HHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          380 KDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.|. ++||.++++..+.  .++++||+++..  .+++.+++++|
T Consensus       348 ~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~--~~~l~~~l~~l  391 (412)
T 2x5d_A          348 AKKLLQDAKVSVSPGIGFGDYGDDHVRFALIEN--RDRLRQAVRGI  391 (412)
T ss_dssp             HHHHHHHHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            99987 5799999886532  368999999873  36777777765

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=2.2e-43  Score=348.11  Aligned_cols=327  Identities=19%  Similarity=0.260  Sum_probs=270.8

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC--CCCCCC-cchHHHHHHHHHHh----CCC--C-CcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-KF--PYIYPD-PESRRLRAALAKDS----GLE--S-DHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~--~~~Y~~-~g~~~lr~~ia~~~----g~~--~-~~i~~t~G~~~al~~  161 (423)
                      ++.++|+|+.|+++++++|.+.+++.+. ..  ..+|++ .+..++|+++++++    |++  + ++|++|+|+++++..
T Consensus        45 ~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~  124 (404)
T 2o1b_A           45 GPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVA  124 (404)
T ss_dssp             CSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHH
T ss_pred             CCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHH
Confidence            4567899999999999899999998773 22  246866 47899999999998    864  4 799999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      ++++++++||+|+++.|+|..+...++..|++++.+|.+. ++.+|++++++.+. .++++|++++|+||||.+++.+++
T Consensus       125 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l  203 (404)
T 2o1b_A          125 VPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQII-DKTKLIYLTYPNNPTGSTATKEVF  203 (404)
T ss_dssp             HHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHH-HHEEEEEECSSCTTTCCCCCHHHH
T ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhc-cCceEEEEcCCCCCCCccCCHHHH
Confidence            9999999999999999999999999999999999999764 56689999999886 578999999999999999998777


Q ss_pred             HHHHc---C-CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--C
Q 014492          241 LKILE---M-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (423)
Q Consensus       241 ~~i~~---~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~  311 (423)
                      ++|++   . |+++|+||+|.++.+++..  .... ...+++++++|+||.+|++|+|+||+++++++++.+.....  .
T Consensus       204 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~  283 (404)
T 2o1b_A          204 DEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTN  283 (404)
T ss_dssp             HHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhcc
Confidence            66655   3 9999999999998764321  1111 12367899999999999999999999999999998876554  4


Q ss_pred             CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcE
Q 014492          312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~  389 (423)
                      ++.+.++|.++.++|++ .+++++.+++++++++++.+.|+++++....+.+++|+|++++++.+..++.+.|. ++||.
T Consensus       284 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~  363 (404)
T 2o1b_A          284 AGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSIL  363 (404)
T ss_dssp             CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEE
T ss_pred             CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEE
Confidence            68899999999999987 67899999999999999999999885333345567789999987778889999987 68999


Q ss_pred             EEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++++..+.  .++++||+++..+  +++.+++++|
T Consensus       364 v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~~l  396 (404)
T 2o1b_A          364 VAPGKPFGENGNRYVRISLALDD--QKLDEAAIRL  396 (404)
T ss_dssp             CEESGGGCGGGTTEEEEECCSCT--THHHHHHHHH
T ss_pred             EeCchhhCcCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence            99986533  3689999998632  4566666654

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-43  Score=351.64  Aligned_cols=327  Identities=19%  Similarity=0.317  Sum_probs=272.4

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC--CCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-LKF--PYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADELIDLI  162 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~--~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~  162 (423)
                      .+.++|+|+.|.+++++++.+.+++.+ +..  ...|++. |..++|+++++++    |  +++++|++|+|+++++..+
T Consensus        55 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~  134 (447)
T 3b46_A           55 QGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSC  134 (447)
T ss_dssp             TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHH
T ss_pred             cCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH
Confidence            345789999999999999999999876 332  2568554 7899999999997    3  4668999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC------------CCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      +++++++||+|+++.|+|..+...++..|++++.+|.+.            ++.+|+++|++.+. .++++|++++||||
T Consensus       135 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~np  213 (447)
T 3b46_A          135 LMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPHNP  213 (447)
T ss_dssp             HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred             HHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCCCC
Confidence            999999999999999999999999999999999999543            46899999999997 68999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc--hhhhh--ccCCcEEEEccChhhhcccCcccccccc-CHHH
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSI  301 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~  301 (423)
                      ||.+++.+++++|++.    |++||+||+|.++.+++.  ....+  +..+++++++|+||.||++|+|+||+++ ++++
T Consensus       214 tG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l  293 (447)
T 3b46_A          214 IGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAEL  293 (447)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHH
T ss_pred             CCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHH
Confidence            9999998888877764    999999999999876542  22222  2357899999999999999999999999 9999


Q ss_pred             HHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC---
Q 014492          302 IEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG---  373 (423)
Q Consensus       302 ~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~---  373 (423)
                      ++.+....  ..++.+++.|.++.++|+.   .+++++.+++++++++++.+.|+++++....|.+++|+|++++..   
T Consensus       294 ~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p  373 (447)
T 3b46_A          294 LSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIP  373 (447)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCC
T ss_pred             HHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCc
Confidence            99887654  3578899999999989976   467889999999999999999998754334577899999999742   


Q ss_pred             ------------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 ------------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ------------~~~~~l~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                                  .+..++++.|. ++||.+.+++.+.       .++++||+++..  .++|.+++++|
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~--~e~l~~~~~~l  440 (447)
T 3b46_A          374 EDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKD--DAYLENAVERL  440 (447)
T ss_dssp             TTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSC--HHHHHHHHHHG
T ss_pred             cccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence                        35668888887 6899999876532       268999999863  36788888776

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=9.8e-43  Score=341.62  Aligned_cols=323  Identities=23%  Similarity=0.324  Sum_probs=269.4

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhc-CC-CCCCCCC-cchHHHHHHHHHHh----CC--CCCcEEEeCCHHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM  163 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y~~-~g~~~lr~~ia~~~----g~--~~~~i~~t~G~~~al~~~~  163 (423)
                      .++++|+|+.|++++++++.+.+++.+ +. ....|++ .+..++|+++++++    |+  ++++|++|+|+++++..++
T Consensus        39 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~  118 (389)
T 1o4s_A           39 KGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAF  118 (389)
T ss_dssp             TTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHH
T ss_pred             cCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHH
Confidence            456789999999998888999998876 22 2346865 47899999999997    65  6789999999999999999


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++++++||+|+++.|+|..+...++..|++++.+|.+.  ++.+|++++++.++ .++++|++++|+||||.+++.++++
T Consensus       119 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~l~  197 (389)
T 1o4s_A          119 MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-GKTKAVLINSPNNPTGVVYRREFLE  197 (389)
T ss_dssp             HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cCceEEEEcCCCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999753  57899999999997 5899999999999999999977666


Q ss_pred             HHHcC----CCEEEEccCCccccCCCc--hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CC
Q 014492          242 KILEM----PILVVLDEAYTEFSGLES--RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY  312 (423)
Q Consensus       242 ~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~  312 (423)
                      +|++.    |+++|+||+|.++.+++.  ....+.. .+++++++|+||.+|++|+|+||+++++++++.+.....  .+
T Consensus       198 ~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~  277 (389)
T 1o4s_A          198 GLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTS  277 (389)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhccc
Confidence            66553    999999999998876432  2222322 578999999999999999999999999999988876654  46


Q ss_pred             CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEE
Q 014492          313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIR  391 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~  391 (423)
                      +.+.+++.++.++|++.  +++.+++++++++++.+.|++++.....+.+++|+|++++  .+..++.+.|. ++||.++
T Consensus       278 ~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~  353 (389)
T 1o4s_A          278 CINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVR--GDDVKFCERLLEEKKVALV  353 (389)
T ss_dssp             SCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECS--SCHHHHHHHHHHHHCEECE
T ss_pred             CCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCC--CCHHHHHHHHHHHCCEEEe
Confidence            78899999999999875  7788899999999999999887432234566788999986  57889999997 8999999


Q ss_pred             eCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          392 HYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       392 ~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++..+..++++||+++..  .+++.+++++|
T Consensus       354 ~g~~f~~~~~~Ris~~~~--~~~l~~~l~~l  382 (389)
T 1o4s_A          354 PGSAFLKPGFVRLSFATS--IERLTEALDRI  382 (389)
T ss_dssp             EGGGGTCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             CchhcCCCCeEEEEEeCC--HHHHHHHHHHH
Confidence            987655567999999863  36777777765

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=7.4e-43  Score=342.07  Aligned_cols=349  Identities=21%  Similarity=0.313  Sum_probs=280.1

Q ss_pred             HhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----
Q 014492           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----  142 (423)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----  142 (423)
                      ++..+.++ +...+.....+....++++++|+.|++++++++.+.+++.+. . ....|++. +..++|+++++++    
T Consensus         6 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~   84 (388)
T 1j32_A            6 RVESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDN   84 (388)
T ss_dssp             HHHTSCCC-SSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             HhHhCCcc-HHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence            34444444 233344444444445678899999999998899999888762 2 23568654 7899999999987    


Q ss_pred             C--CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCC
Q 014492          143 G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREK  218 (423)
Q Consensus       143 g--~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~  218 (423)
                      |  +++++|++|+|+++++..++++++++||+|+++.|+|+.+...++..|++++.+|.+.  ++.+|++++++.++ .+
T Consensus        85 g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~  163 (388)
T 1j32_A           85 GLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-PK  163 (388)
T ss_dssp             CCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-TT
T ss_pred             CCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcC-cC
Confidence            4  4678999999999999999999999999999999999999999999999999999753  67899999999997 58


Q ss_pred             ceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc--cCCcEEEEccChhhhcccC
Q 014492          219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAG  289 (423)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~i~S~SK~~g~~G  289 (423)
                      +++|++++|+||||.+++.+++++|++.    |+++|+||+|.++.+++.   ....+.  ..++++++.|+||.+|++|
T Consensus       164 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G  243 (388)
T 1j32_A          164 TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTG  243 (388)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTT
T ss_pred             ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcc
Confidence            9999999999999999997777776654    999999999999876432   122221  1457899999999999999


Q ss_pred             ccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceE
Q 014492          290 LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNF  365 (423)
Q Consensus       290 ~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~  365 (423)
                      +|+||+++++++++.+.....  .++.+.+++.++..+|+. .+++++.+++++++++++.+.|++++++.+ .+.+++|
T Consensus       244 ~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~  323 (388)
T 1j32_A          244 WRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFY  323 (388)
T ss_dssp             TCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTE
T ss_pred             cceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEE
Confidence            999999999999988876544  367889999988888874 578899999999999999999998855554 4556778


Q ss_pred             EEEEeCC-CCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          366 ILCEVTS-GMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       366 ~~~~~~~-~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|++++. +.+..++.+.|.+ +||.++++..+..++++||+++..  .+++.+++++|
T Consensus       324 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~--~~~i~~~~~~l  380 (388)
T 1j32_A          324 MFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATD--LDTIKRGMERL  380 (388)
T ss_dssp             ECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSC--HHHHHHHHHHH
T ss_pred             EEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCC--HHHHHHHHHHH
Confidence            8888864 5678899999985 799999987655578999999853  35577776655

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=1.7e-42  Score=339.44  Aligned_cols=325  Identities=19%  Similarity=0.322  Sum_probs=271.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.+.+++++++.+.+++.+. .. ...|+.. +..++|+++++++    |  ++++ +|++|+|+++++..+++
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~  109 (386)
T 1u08_A           30 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT  109 (386)
T ss_dssp             TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHH
Confidence            35799999999988899999998763 22 3568654 7899999999995    6  5678 99999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +++++||+|+++.|+|+.+...++..|++++.+|.+. ++.+|++++++.+. .++++|++++|+||||.+++.+++++|
T Consensus       110 ~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i  188 (386)
T 1u08_A          110 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL  188 (386)
T ss_dssp             HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             HhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-ccCEEEEEeCCCCCCCccCCHHHHHHH
Confidence            9999999999999999999999999999999999754 57899999999996 689999999999999999998776666


Q ss_pred             Hc---C-CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492          244 LE---M-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (423)
Q Consensus       244 ~~---~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~  313 (423)
                      ++   . |+++|+||+|.++.+.+.   ....+. ..+++++++|+||.+|++|+|+||+++++++++.+.....  .++
T Consensus       189 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~  268 (386)
T 1u08_A          189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS  268 (386)
T ss_dssp             HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhccC
Confidence            54   4 999999999999876432   122222 3578999999999999999999999999999988876553  578


Q ss_pred             CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCC--CCHHHHHHHHH-hCCc
Q 014492          314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSG--MDAKKLKDDLA-KMGV  388 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~--~~~~~l~~~L~-~~gI  388 (423)
                      .+.+.+.++..+|+. .+++++.+++++++++++.+.|++++ +.+ .+.+++|+|+++++.  .+..++.+.|. ++||
T Consensus       269 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi  347 (386)
T 1u08_A          269 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESR-LEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGV  347 (386)
T ss_dssp             CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSS-CEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCE
T ss_pred             CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCE
Confidence            889999999988876 67889999999999999999999885 444 456678999999854  57889999887 7899


Q ss_pred             EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          389 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       389 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      .++++..+    ..++++||+++..  .+++.+++++|+
T Consensus       348 ~v~~g~~f~~~~~~~~~iRis~~~~--~~~i~~~~~~l~  384 (386)
T 1u08_A          348 AAIPLSVFCADPFPHKLIRLCFAKK--ESTLLAAAERLR  384 (386)
T ss_dssp             ECEEGGGGCSSCCCSCEEEEECCSC--HHHHHHHHHHHT
T ss_pred             EEeCchHhCCCCCCCCEEEEEEcCC--HHHHHHHHHHHh
Confidence            99987642    3568999999863  367888877763

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=1.8e-42  Score=339.43  Aligned_cols=325  Identities=23%  Similarity=0.379  Sum_probs=270.7

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCc-chHHHHHHHHHHh----C--CCCCc-EEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDP-ESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~-i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.+++++++++.+.+++.+. . ....|++. +..++|+++++++    |  +++++ |++|+|+++++..+++
T Consensus        26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~  105 (389)
T 1gd9_A           26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLS  105 (389)
T ss_dssp             SSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHT
T ss_pred             cCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHH
Confidence            46899999999998899999888762 2 23568654 7899999999998    7  46788 9999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      +++++||+|+++.|+|+.+...++..|++++.+|.+.  ++.+|++++++.+. .++++|++++|+||||.+++.+++++
T Consensus       106 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~  184 (389)
T 1gd9_A          106 AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEE  184 (389)
T ss_dssp             TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCCCHHHHHH
Confidence            9999999999999999999999999999999999753  57789999999997 58999999999999999999777777


Q ss_pred             HHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--C
Q 014492          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y  312 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~  312 (423)
                      |++.    |+++|+||+|.++.+.+.   ....+. ..+++++++|+||.+|++|+|+||+++++++++.+......  +
T Consensus       185 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  264 (389)
T 1gd9_A          185 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNAT  264 (389)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhcc
Confidence            6653    999999999999876432   122222 24679999999999999999999999999999988876553  6


Q ss_pred             CCcHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHHH-hCC
Q 014492          313 NVSVAAEVAACAALQN-PI--YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMG  387 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~-~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~g  387 (423)
                      +.+.+.+.++.++|+. .+  ++++.+++++++++++.+.|++++.....+.+++|+|+++++ +.+..++.+.|. ++|
T Consensus       265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  344 (389)
T 1gd9_A          265 CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEAR  344 (389)
T ss_dssp             SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCC
Confidence            7899999999999987 34  788999999999999999999875323345667889999874 568899999998 899


Q ss_pred             cEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++++..+.  .++++||+++..  .+++.+++++|
T Consensus       345 i~v~~g~~~~~~~~~~iRi~~~~~--~~~i~~~l~~l  379 (389)
T 1gd9_A          345 VAVVPGSAFGKAGEGYVRISYATA--YEKLEEAMDRM  379 (389)
T ss_dssp             EECEEGGGGCGGGTTBEEEECCSC--HHHHHHHHHHH
T ss_pred             EEEeCchhhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            9999876532  368999999863  36677777665

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=7.9e-43  Score=346.57  Aligned_cols=327  Identities=19%  Similarity=0.292  Sum_probs=273.2

Q ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHhC-----CCCCcEEEeCCHHHHH
Q 014492           93 KPEDIVKIDANENP----YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI  159 (423)
Q Consensus        93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~g-----~~~~~i~~t~G~~~al  159 (423)
                      +++++|+|+.|.+.    +++++.+.+++.+. .  ....| +..+..++|++++++++     +++++|++|+|+++++
T Consensus        52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al  131 (427)
T 3dyd_A           52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAI  131 (427)
T ss_dssp             TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHH
T ss_pred             CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHH
Confidence            45678999999864    67889999998763 2  23567 55689999999999998     7889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .+++..++++||+|+++.|+|..+...++..|++++.+|.+  .++.+|++++++.++ .++++|++++|+||||.+++.
T Consensus       132 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~  210 (427)
T 3dyd_A          132 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSK  210 (427)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCC-TTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhc-cCCCEEEEECCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999853  467899999999997 579999999999999999996


Q ss_pred             HHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccC-------HHHHH
Q 014492          238 EDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-------LSIIE  303 (423)
Q Consensus       238 ~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-------~~~~~  303 (423)
                      +++++|++.    |+++|+||+|.+|.+++.   ....+....++++++|+||.|+++|+|+||++++       +++++
T Consensus       211 ~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~  290 (427)
T 3dyd_A          211 RHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRD  290 (427)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHH
Confidence            666666553    999999999999876442   2333444567899999999999999999999986       46777


Q ss_pred             HHHHhc-CCCCCcHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-----CC
Q 014492          304 YLWRAK-QPYNVSVAAEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----GM  374 (423)
Q Consensus       304 ~l~~~~-~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-----~~  374 (423)
                      .+.... ..++.+.++|.++.++|+  ..+++++++++++++++++.+.|++++++.+ .|++++|+|+.++.     +.
T Consensus       291 ~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~  370 (427)
T 3dyd_A          291 GLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFE  370 (427)
T ss_dssp             HHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCS
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCC
Confidence            776553 247899999999999998  4678899999999999999999999866654 68889999998862     35


Q ss_pred             CHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          375 DAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       375 ~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +..++++.|. ++||.+.++..+..++++||+++..+  +++.+++++|
T Consensus       371 ~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~--e~i~~~l~~l  417 (427)
T 3dyd_A          371 NDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPE--VMMLEACSRI  417 (427)
T ss_dssp             SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCH--HHHHHHHHHH
Confidence            7888998886 89999999877667899999998543  5676666654

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=5.9e-43  Score=349.43  Aligned_cols=325  Identities=23%  Similarity=0.375  Sum_probs=267.6

Q ss_pred             CCeeEcCCCCCCCC--CCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHh----CC-CCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYG--PPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDS----GL-ESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~~-~~----~~~Y~~-~g~~~lr~~ia~~~----g~-~~~~i~~t~G~~~al~~  161 (423)
                      .++|+|+.|.++..  +++++.+++.+. ..    ...|+. .|..+||+++++++    |+ ++++|++|+|+++++..
T Consensus        76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~  155 (448)
T 3aow_A           76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDL  155 (448)
T ss_dssp             SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHH
T ss_pred             CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHH
Confidence            46899999876543  567788777652 11    146754 47899999999999    88 78899999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh----c-CCceEEE-EcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG~~~  235 (423)
                      ++++++++||.|+++.|+|..+...++..|++++.+|.+++ ++|+++|++.++    + .++++|+ +++|+||||.++
T Consensus       156 ~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~  234 (448)
T 3aow_A          156 IGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTM  234 (448)
T ss_dssp             HHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC
T ss_pred             HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCC
Confidence            99999999999999999999999999999999999997654 599999999986    3 3789985 579999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA  308 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~  308 (423)
                      +.+++++|++.    |++||+||+|.++.+++.   ....++..+++++++||||.++ +|+|+||+++++++++.+...
T Consensus       235 ~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~  313 (448)
T 3aow_A          235 NEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIA  313 (448)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHH
Confidence            99877777664    999999999999876432   2333444578999999999999 999999999999999988776


Q ss_pred             cCC--CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHcc-CC-CCee-cCCCceEEEEEeCCCCCHHHHH
Q 014492          309 KQP--YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKD-VP-FLNP-YPSYSNFILCEVTSGMDAKKLK  380 (423)
Q Consensus       309 ~~~--~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~-~p~~~~~~~~~~~~~~~~~~l~  380 (423)
                      ...  ++.++++|.++.++|++   .+++++.+++++++++++.+.|++ ++ ++.. .|.+|+|+|++++++.+..++.
T Consensus       314 ~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~~~~~l~  393 (448)
T 3aow_A          314 KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKML  393 (448)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTCCHHHHH
T ss_pred             HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCCCHHHHH
Confidence            543  67799999999999987   367888999999999999999987 45 3554 5778999999998778899999


Q ss_pred             HHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          381 DDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       381 ~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.|.++||.+.++..+    ..++++||+++..+ .+++.+++++|
T Consensus       394 ~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~~-~e~i~~~~~~L  438 (448)
T 3aow_A          394 ERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVD-EDKIMEGIKRL  438 (448)
T ss_dssp             HHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSC-THHHHHHHHHH
T ss_pred             HHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCCC-HHHHHHHHHHH
Confidence            9999889999987653    34689999998632 25566666554

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=8.6e-43  Score=339.52  Aligned_cols=318  Identities=20%  Similarity=0.283  Sum_probs=267.8

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCC-cchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELIDLIM  163 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~-~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~~  163 (423)
                      .++++|+|+.+++++++++.+.+++.+. . ....|++ .+..++|++++++++      +++++|++|+|+++++..++
T Consensus        27 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~  106 (370)
T 2z61_A           27 EGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFAL  106 (370)
T ss_dssp             TTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHH
T ss_pred             cCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHH
Confidence            4567899999999998899999888762 2 2356865 478999999999974      67789999999999999999


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      ++++++||+|+++.|+|+.+...++..|++++.+|      +|++++++.++ .++++|++++|+||||.+++.+ +.++
T Consensus       107 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~-l~~~  178 (370)
T 2z61_A          107 SSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALS-DKTKAIIINSPSNPLGEVIDRE-IYEF  178 (370)
T ss_dssp             HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCC-SSEEEEEEESSCTTTCCCCCHH-HHHH
T ss_pred             HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcc-cCceEEEEcCCCCCcCcccCHH-HHHH
Confidence            99999999999999999999999999999999998      78999999997 5899999999999999999999 9999


Q ss_pred             HcC-CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHH
Q 014492          244 LEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVA  317 (423)
Q Consensus       244 ~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~  317 (423)
                      |+. |+++|+||+|.++.+++..  ...+ +..+++++++|+||.+|++|+|+||+++++++++.+.....  .++.+++
T Consensus       179 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (370)
T 2z61_A          179 AYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTI  258 (370)
T ss_dssp             HHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHH
T ss_pred             HHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHH
Confidence            987 9999999999988764322  2222 23578999999999999999999999999999988876554  3578999


Q ss_pred             HHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCC
Q 014492          318 AEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYN  394 (423)
Q Consensus       318 ~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~  394 (423)
                      ++.++.++|+.  .+++++.+++++++++++.+.|++++.....+.+++|+|+++++  +..++.+.|. ++||.++++.
T Consensus       259 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~  336 (370)
T 2z61_A          259 SQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGE--DGREFAYKLLKEKFVALTPGI  336 (370)
T ss_dssp             HHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSS--CHHHHHHHHHHHHCEECEEGG
T ss_pred             HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCC--CHHHHHHHHHHhCCEEEeCch
Confidence            99999999985  56788899999999999999998874322345667889999874  7889999997 7899999876


Q ss_pred             CCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          395 NKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       395 ~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.  .++++||+++..  .+++.+++++|
T Consensus       337 ~f~~~~~~~~Ri~~~~~--~~~i~~~~~~l  364 (370)
T 2z61_A          337 GFGSKGKNYIRISYANS--YENIKEGLERI  364 (370)
T ss_dssp             GGCGGGSSBEEEECCSC--HHHHHHHHHHH
T ss_pred             hhCCCCCCEEEEEEeCC--HHHHHHHHHHH
Confidence            543  368999999953  36677777765

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=1.2e-42  Score=341.78  Aligned_cols=320  Identities=20%  Similarity=0.317  Sum_probs=261.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-----CCCC-CCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF-----PYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-----~~~Y-~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~  161 (423)
                      +++|+|+.|.+++++++.+.+++.+. ..     ...| +..+..++|+++++++    |  +++++|++|+|+++++..
T Consensus        35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~  114 (398)
T 3ele_A           35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI  114 (398)
T ss_dssp             GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred             CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence            56899999988888999999988763 21     2567 4567899999999986    3  678999999999999999


Q ss_pred             HHHHhcCCC-CeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          162 IMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       162 ~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      +++.++++| |+|+++.|+|..+...++..|++++.+|.+ +++.+|++++++.+. .++++|++++||||||.+++.++
T Consensus       115 ~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~  193 (398)
T 3ele_A          115 CFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERIN-AHTRGVIINSPNNPSGTVYSEET  193 (398)
T ss_dssp             HHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCC-TTEEEEEECSSCTTTCCCCCHHH
T ss_pred             HHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhC-cCCCEEEEcCCCCCCCCCCCHHH
Confidence            999999999 999999999999999999999999999975 367899999999997 68999999999999999999888


Q ss_pred             HHHHHc----------CCCEEEEccCCccccCCCchh-hhhccCCcEEEEccChhhhcccCccccccccCHHH------H
Q 014492          240 LLKILE----------MPILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI------I  302 (423)
Q Consensus       240 l~~i~~----------~~~~li~Deay~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~------~  302 (423)
                      +++|++          .|+++|+||+|.+|.+++... ......+++++++|+||.+|++|+|+||+++++++      .
T Consensus       194 l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  273 (398)
T 3ele_A          194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELY  273 (398)
T ss_dssp             HHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHH
T ss_pred             HHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHH
Confidence            876543          489999999999988654222 22344688999999999999999999999998763      3


Q ss_pred             HHHHHh---cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHH
Q 014492          303 EYLWRA---KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       303 ~~l~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l  379 (423)
                      +.+...   ...++.+.+++.++..++++.+    .+++++++++++.+.|++++.....+.+++|+|++++. .+..++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~  348 (398)
T 3ele_A          274 AAVCGAGRALGYVCAPSLFQKMIVKCQGATG----DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALE-DDSNAF  348 (398)
T ss_dssp             HHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC----CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSS-SCHHHH
T ss_pred             HHHHHHhhhccccCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCC-CCHHHH
Confidence            333322   2346788899998888887643    35677888999999998875444556777889999984 478899


Q ss_pred             HHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          380 KDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+.|.++||.++++..+..++++||+++..  .+++.+++++|
T Consensus       349 ~~~l~~~gi~v~~g~~~~~~~~iRis~~~~--~e~i~~~l~~l  389 (398)
T 3ele_A          349 CEKAKEEDVLIVAADGFGCPGWVRISYCVD--REMIKHSMPAF  389 (398)
T ss_dssp             HHHHHTTTEECEESGGGTCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHHHHCCEEEeCccccCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            999999999999988766688999999853  35566665554

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=3.7e-42  Score=338.31  Aligned_cols=333  Identities=15%  Similarity=0.227  Sum_probs=270.7

Q ss_pred             HHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHH
Q 014492           87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADEL  158 (423)
Q Consensus        87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~a  158 (423)
                      ..++|..+.++++|+.+++++++++.+.+++.+. . ....|++. ..++|+++++++    |  +++++|++|+|++++
T Consensus        23 g~~~g~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a  101 (399)
T 1c7n_A           23 YSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPA  101 (399)
T ss_dssp             HHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHH
T ss_pred             hhhccccCCCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence            3445543357899999999999999999988763 1 23568665 789999999985    6  678899999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-C--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      +..++++++++||+|+++.|+|..+...++..|++++.+|.+ +  ++.+|++++++.+++.++++|++++|+||||.++
T Consensus       102 ~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~  181 (399)
T 1c7n_A          102 VFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVW  181 (399)
T ss_dssp             HHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCC
T ss_pred             HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCc
Confidence            999999999999999999999999999999999999999964 2  2459999999999756899999999999999999


Q ss_pred             CHHHHHHHHc---C-CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccC-HHHHHHH
Q 014492          236 NDEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYL  305 (423)
Q Consensus       236 ~~~~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l  305 (423)
                      +.+++++|++   . |+++|+||+|.++.+++.   ....+..  .++++++.|+||.+|++|+|+||++++ +++++.+
T Consensus       182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l  261 (399)
T 1c7n_A          182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERF  261 (399)
T ss_dssp             CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHH
Confidence            9666666554   3 999999999999876432   2222222  478899999999999999999999996 6788888


Q ss_pred             HHhcCCC---CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCC-CCCHHH
Q 014492          306 WRAKQPY---NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDAKK  378 (423)
Q Consensus       306 ~~~~~~~---~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~-~~~~~~  378 (423)
                      ......+   +.+++++.++.++|+. .+++++.+++++++++++.+.|++ ++++.+. +.+++++|+++++ +.+..+
T Consensus       262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (399)
T 1c7n_A          262 TKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKA  341 (399)
T ss_dssp             HHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHH
T ss_pred             HHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHH
Confidence            7655443   6789999998888875 578899999999999999999988 7666644 4556677899975 367889


Q ss_pred             HHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          379 LKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       379 l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.+.|. ++||.++++..+.  .++++||+++..+  +++.+++++|
T Consensus       342 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~l~~~l~~l  386 (399)
T 1c7n_A          342 MEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPS--SVIQESLERL  386 (399)
T ss_dssp             HHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCH--HHHHHHHHHH
Confidence            999997 7899999876532  4689999998763  5677777655

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=9e-43  Score=346.84  Aligned_cols=326  Identities=17%  Similarity=0.133  Sum_probs=274.4

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CC-CCCCCc-chHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K-FP-YIYPDP-ESRRLRAALAKDSG------LESDHILVGCGADELIDLIM  163 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~-~~Y~~~-g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~~  163 (423)
                      +.++|+|+.|++++++++++.+++.+. . .. .+|++. +..++|++++++++      +++++|++|+|+++++.+++
T Consensus        43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~  122 (437)
T 3g0t_A           43 GTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSF  122 (437)
T ss_dssp             TCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred             CCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHH
Confidence            467899999999999999999998763 2 22 568654 67899999999986      67889999999999999999


Q ss_pred             HHhc--CCCC--eEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          164 RCVL--DPGD--KIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       164 ~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ++++  ++||  +|+++.|+|..+...++..|++++.+|.+ +++.+|++++++++.+.++++|++++||||||.+++.+
T Consensus       123 ~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~  202 (437)
T 3g0t_A          123 LVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDE  202 (437)
T ss_dssp             HHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHH
Confidence            9998  9999  99999999999999999999999999974 56678999999999547899999999999999999988


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCc-hh-------hhhcc-CCcEEEEccChhhhcccCccccccccCHHHHH-H
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLES-RM-------EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE-Y  304 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~-~~-------~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~-~  304 (423)
                      ++++|++.    |++||+||+|.++.+++. ..       ..+.. .+++++++|+||.+|++|+|+||+++++++++ .
T Consensus       203 ~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  282 (437)
T 3g0t_A          203 ELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYERE  282 (437)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCB
T ss_pred             HHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhh
Confidence            87777653    999999999998775421 22       23333 78899999999999999999999999999888 6


Q ss_pred             -----------------HHHhcC--CCCCcHHHHHHHHHHhCChH-H---HHHHHHHHHHHHHHHHHHHccCCCCeec--
Q 014492          305 -----------------LWRAKQ--PYNVSVAAEVAACAALQNPI-Y---LEKVKEALIKERERLFKLLKDVPFLNPY--  359 (423)
Q Consensus       305 -----------------l~~~~~--~~~~~~~~~~a~~~~l~~~~-~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~--  359 (423)
                                       +.+...  .++.+.+++.++..+|++.+ |   +++.+++++++++++.+.|++++ +.+.  
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~  361 (437)
T 3g0t_A          283 YPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNG-FNIVYD  361 (437)
T ss_dssp             CGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTT-EEESSC
T ss_pred             hhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CEEecc
Confidence                             554433  47889999999999998754 4   88999999999999999999884 4544  


Q ss_pred             -----C-CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC--CCeEEEEec--ChhhHHHHHHHHhh
Q 014492          360 -----P-SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL--KGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       360 -----p-~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~--~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                           | .+++|+|++++ +.+..++.+.|.++||.++++..+..  ++++||+++  +.++++++.++|++
T Consensus       362 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~  432 (437)
T 3g0t_A          362 KDGNEPLADGFYFTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQM  432 (437)
T ss_dssp             EETTEECCSSSEEEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHH
T ss_pred             ccCCCCCceeEEEEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence                 6 88999999998 78899999999999999999876332  378999998  45666666666654

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=8.1e-43  Score=340.21  Aligned_cols=327  Identities=14%  Similarity=0.131  Sum_probs=271.1

Q ss_pred             HhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHH
Q 014492           89 QLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRRLRAALAKDSG------LESDHILVGCGADELID  160 (423)
Q Consensus        89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~  160 (423)
                      .|+..++++|+|+.|+++++++|++.+++.+. .. ..+|++.+ .++|++++++++      +++++|++|+|+++++.
T Consensus        17 ~~d~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~   95 (377)
T 3fdb_A           17 KWTRYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQPDG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLY   95 (377)
T ss_dssp             HHHSSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCCSS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred             eeeccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHH
Confidence            34556788999999999999999999998763 22 36786655 889999999987      78899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      .+++.++++||+|+++.|+|..+...++..|++++.+|.+.+  +|++++++.++ .+++++++++|+||||.+++.+++
T Consensus        96 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l  172 (377)
T 3fdb_A           96 IAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQ-AGARSILLCNPYNPLGMVFAPEWL  172 (377)
T ss_dssp             HHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHH-TTCCEEEEESSBTTTTBCCCHHHH
T ss_pred             HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999999997665  99999999997 578999999999999999999998


Q ss_pred             HHHHcC----CCEEEEccCCccccCCC--c--hhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHhcC-
Q 014492          241 LKILEM----PILVVLDEAYTEFSGLE--S--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ-  310 (423)
Q Consensus       241 ~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~-  310 (423)
                      ++|++.    |+++|+||+|.++.+.+  .  ....+...+++++++|+||.+|++|+|+||++. ++++++.+..... 
T Consensus       173 ~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~  252 (377)
T 3fdb_A          173 NELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPV  252 (377)
T ss_dssp             HHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHH
T ss_pred             HHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHh
Confidence            888653    99999999999987654  1  122222367889999999999999999998876 7888888876543 


Q ss_pred             -CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCCC-CCHHHHHHHHHh
Q 014492          311 -PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSG-MDAKKLKDDLAK  385 (423)
Q Consensus       311 -~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~~-~~~~~l~~~L~~  385 (423)
                       .++.+++++.++.+++++ .+++++.+++++++++++.+.|++ ++++.+. +.+++++|++++.. .+ .++.+.|.+
T Consensus       253 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~  331 (377)
T 3fdb_A          253 IKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE-GSPSEFFIE  331 (377)
T ss_dssp             HHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC-SCHHHHHHH
T ss_pred             hcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCC-HHHHHHHHH
Confidence             368899999998888876 578899999999999999999988 6666654 45566778999853 33 567777774


Q ss_pred             -CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          386 -MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       386 -~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       +||.++++..+.  .++++||+++..  .+++.+++++|
T Consensus       332 ~~gi~v~~g~~~~~~~~~~~Ris~~~~--~e~i~~~l~~l  369 (377)
T 3fdb_A          332 KAKVAMNDGAWFGEDGTGFCRLNFATS--REVLEEAIDRM  369 (377)
T ss_dssp             HHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             hCCEEecCChhccCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence             599999987633  468999999863  35677776655

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=4.1e-42  Score=341.42  Aligned_cols=325  Identities=19%  Similarity=0.259  Sum_probs=261.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCC-------------CCCCCCCc-chHHHHHHHHHHhC--------CCCCcEEEe
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLK-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHILVG  152 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~-------------~~~~Y~~~-g~~~lr~~ia~~~g--------~~~~~i~~t  152 (423)
                      ..+|+|+.++|++++ +.+.+++.+..             ...+|+++ |..++|++++++++        +++++|++|
T Consensus        36 ~~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~  114 (428)
T 1iay_A           36 NGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMA  114 (428)
T ss_dssp             TSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEE
T ss_pred             CceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEc
Confidence            467999999999975 57778877421             12468766 68999999999986        778999999


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH-HHCCCeEEEecCC--CCCCCCHHHHHHHhhc-----CCceEEEE
Q 014492          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFL  224 (423)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~l  224 (423)
                      +|+++++..++++++++||+|+++.|+|..+...+ +..|++++.+|.+  ++|.+|++++++.+++     .++++|++
T Consensus       115 ~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l  194 (428)
T 1iay_A          115 GGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLIL  194 (428)
T ss_dssp             EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             cChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEE
Confidence            99999999999999999999999999999887744 4689999999975  4568899999998863     37899999


Q ss_pred             cCCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCCccccCCCc---hh-hhhcc-------CCcEEEEccChhhhcccC
Q 014492          225 TSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLES---RM-EWVKK-------HDNLIVLRTFSKRAGLAG  289 (423)
Q Consensus       225 ~~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~---~~-~~~~~-------~~~~i~i~S~SK~~g~~G  289 (423)
                      ++||||||.+++.+++++|++   . |++||+||+|.++.+.+.   .. .....       .++++++.|+||.||++|
T Consensus       195 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G  274 (428)
T 1iay_A          195 TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG  274 (428)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred             cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence            999999999999666665554   4 999999999999765421   12 22222       588999999999999999


Q ss_pred             cccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecC-CCc
Q 014492          290 LRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYP-SYS  363 (423)
Q Consensus       290 ~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~  363 (423)
                      +|+||+++ ++++++.+.+...+++.+.++|.++..+|++.+    ++++.+++++++++++.+.|++++ +.+.+ .++
T Consensus       275 lr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g  353 (428)
T 1iay_A          275 FRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG-IKCLKNNAG  353 (428)
T ss_dssp             GCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCCCSSS
T ss_pred             ceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCee
Confidence            99999998 688999888877778899999999999999865    577888999999999999999885 44444 488


Q ss_pred             eEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCCCC--CCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          364 NFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNNKE--LKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       364 ~~~~~~~~~~~------~~~~l~~~L~~~-gI~v~~~~~~~--~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                      +|+|+++++..      +..++.+.|.++ ||.++++..+.  .++++||+++  +.++++++.++|++
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~  422 (428)
T 1iay_A          354 LFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR  422 (428)
T ss_dssp             SEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHH
T ss_pred             EEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence            99999997422      355788999865 99999876532  2579999998  45555555555443

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=1.2e-42  Score=342.89  Aligned_cols=333  Identities=24%  Similarity=0.350  Sum_probs=272.6

Q ss_pred             HHHHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhc-CCC-CCCCCCc-chHHHHHHHHHHh------CCCCCcEEEeC
Q 014492           86 LSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYPDP-ESRRLRAALAKDS------GLESDHILVGC  153 (423)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~Y~~~-g~~~lr~~ia~~~------g~~~~~i~~t~  153 (423)
                      .+.++...++++|+|+.+.+   ++++++.+.+++.+ +.. ...|++. +..++|+++++++      ++++++|++|+
T Consensus        29 ~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~  108 (406)
T 1xi9_A           29 PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTA  108 (406)
T ss_dssp             CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEES
T ss_pred             HHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcC
Confidence            44455555677899999998   78888999888866 222 2468654 6789999999997      46778999999


Q ss_pred             CHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492          154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (423)
Q Consensus       154 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (423)
                      |+++++..++++++++||+|+++.|+|..+...++..|++++.+|.+  +++.+|++++++.++ .++++|++++|+|||
T Consensus       109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~npt  187 (406)
T 1xi9_A          109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-DRTKAIAVINPNNPT  187 (406)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC-cCceEEEEECCCCCC
Confidence            99999999999999999999999999999999999999999999965  356789999999997 589999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc--hhhhhccCCc-EEEEccChhhhcccCccccccc--cCH---
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGA--FPL---  299 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~-~i~i~S~SK~~g~~G~R~G~i~--~~~---  299 (423)
                      |.+++.+++++|++.    |+++|+||+|.++.+++.  ....++ .++ +++++|+||.+|++|+|+||++  +++   
T Consensus       188 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (406)
T 1xi9_A          188 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKL  266 (406)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTT
T ss_pred             CCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchhH
Confidence            999997777666653    999999999999876322  233333 677 8999999999999999999999  898   


Q ss_pred             -HHHHHHHHhcCC-CCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC--C
Q 014492          300 -SIIEYLWRAKQP-YNVSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--G  373 (423)
Q Consensus       300 -~~~~~l~~~~~~-~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~--~  373 (423)
                       ++++.+...... ++.+.+.+.++.++|+ ..+++++.+++++++++++.+.|++++++.+ .+.+++|+|++++.  +
T Consensus       267 ~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (406)
T 1xi9_A          267 SEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW  346 (406)
T ss_dssp             HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSC
T ss_pred             HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCC
Confidence             898888765433 7888899999999995 4567888999999999999999998865554 45567888888875  5


Q ss_pred             CCHHHHHHHHH-hCCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLA-KMGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~-~~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+..++.+.|. ++||.++++..+.  .++++||+++..  .+++.+++++|
T Consensus       347 ~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~--~~~i~~~~~~l  396 (406)
T 1xi9_A          347 KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPP--IEILEEAMDRF  396 (406)
T ss_dssp             SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSC--HHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            68899999997 8999999886543  268999999843  35677666654

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=1e-41  Score=333.98  Aligned_cols=330  Identities=20%  Similarity=0.264  Sum_probs=270.2

Q ss_pred             hCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHH
Q 014492           90 LGRKPEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDL  161 (423)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~  161 (423)
                      |...++++|+|+.++++++++|++.+++.+. .. .+.|+.. ..++++++++++    |  +++++|++|+|+++++..
T Consensus        22 ~d~~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~  100 (391)
T 3dzz_A           22 WGVLKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV-PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISA  100 (391)
T ss_dssp             TTTCCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC-CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHH
T ss_pred             eeccCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC-CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHH
Confidence            3445668999999999999999999999873 22 3567544 466777776664    5  678899999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ++.+++++||+|+++.|+|..+...++..|++++.+|.+   .++.+|++++++++++.++++|++++|+||||.+++.+
T Consensus       101 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~  180 (391)
T 3dzz_A          101 MVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEE  180 (391)
T ss_dssp             HHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHH
T ss_pred             HHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHH
Confidence            999999999999999999999999999999999999973   23449999999999757899999999999999999998


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccC-HHHHHHHHHh
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA  308 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~  308 (423)
                      ++++|++.    |+++|+||+|.++.+.+.   ....+..  .++++++.|+||.+|++|+|+||++++ +++++.+...
T Consensus       181 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~  260 (391)
T 3dzz_A          181 EVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES  260 (391)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH
Confidence            88888664    999999999998876542   2222221  468899999999999999999999997 8888888765


Q ss_pred             c---CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCee-cCCCceEEEEEeCC-CCCHHHHHH
Q 014492          309 K---QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDAKKLKD  381 (423)
Q Consensus       309 ~---~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~  381 (423)
                      .   ..++.+++++.++..+++. .+++++.+++++++++++.+.|++ ++++.+ .+.+++++|++++. +.+..++.+
T Consensus       261 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (391)
T 3dzz_A          261 FFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCK  340 (391)
T ss_dssp             HHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHH
T ss_pred             HHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHH
Confidence            3   4578888898888888875 577899999999999999999998 776665 45566778899975 578999999


Q ss_pred             HHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          382 DLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .|. ++||.++++..+  ..++++||+++..+  +++.+++++|
T Consensus       341 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l  382 (391)
T 3dzz_A          341 YLREKTGLIISAGNGYRGNGHEFVRINLACPK--ELVIDGMQRL  382 (391)
T ss_dssp             HHHHHHCEECEESGGGCTTGGGEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHhCCEEEeCchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            996 899999998753  33589999998532  5566666654

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=2.9e-42  Score=340.22  Aligned_cols=325  Identities=22%  Similarity=0.316  Sum_probs=270.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-chHHHHHHHHHHhC------CCC-CcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~g------~~~-~~i~~t~G~~~al~~~~  163 (423)
                      .++|+|+.|++++++++.+.+++.+. .  ...+|++. +..++|++++++++      +++ ++|++|+|+++++..++
T Consensus        23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~  102 (410)
T 3e2y_A           23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSI  102 (410)
T ss_dssp             TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHH
Confidence            56799999999999999999998873 2  22578654 68999999999986      677 79999999999999999


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-----------CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----------SDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-----------~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      +.++++||+|+++.|+|..+...++..|++++.++.+           .++.+|++++++.+. .++++|++++|+||||
T Consensus       103 ~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~nptG  181 (410)
T 3e2y_A          103 QGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-SKTKAIILNTPHNPLG  181 (410)
T ss_dssp             HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC-TTEEEEEEESSCTTTC
T ss_pred             HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC-CCceEEEEeCCCCCCC
Confidence            9999999999999999999999999999999999864           345689999999996 6899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (423)
Q Consensus       233 ~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~  304 (423)
                      .+++.+++++|++.    |+++|+||+|.++.+.+.   ....+ ...+++++++|+||.+|++|+|+||+++++++++.
T Consensus       182 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~  261 (410)
T 3e2y_A          182 KVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKH  261 (410)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHH
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHH
Confidence            99998888887764    999999999998876442   12222 23578999999999999999999999999999998


Q ss_pred             HHHhcC--CCCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--
Q 014492          305 LWRAKQ--PYNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--  372 (423)
Q Consensus       305 l~~~~~--~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--  372 (423)
                      +.....  .++.+++++.++..+|++        .+++++.+++++++++++.+.|+++++....|.+++|+|++++.  
T Consensus       262 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~  341 (410)
T 3e2y_A          262 LQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLG  341 (410)
T ss_dssp             HHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGC
T ss_pred             HHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhh
Confidence            876654  578899999999988863        56889999999999999999999986444678889999998853  


Q ss_pred             -CCC--------HHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 -GMD--------AKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 -~~~--------~~~l~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       +.+        ..++.+.|+ ++||.+.+++.+.       ..+++||+++..  .+++.+++++|
T Consensus       342 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~l~~~l~~l  406 (410)
T 3e2y_A          342 ADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKK--DSTLDAAEEIF  406 (410)
T ss_dssp             CCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCC--HHHHHHHHHHH
T ss_pred             cccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCC--HHHHHHHHHHH
Confidence             121        347777665 7899999977532       358999999873  36677777665

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=6.1e-42  Score=334.84  Aligned_cols=319  Identities=23%  Similarity=0.346  Sum_probs=265.1

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      ++|+|+.|++++++++.+.+++.+ +.....|++. +..++|+++++++++++++|++|+|+++++..+++.++++||+|
T Consensus        26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~V  105 (381)
T 1v2d_A           26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEV  105 (381)
T ss_dssp             TCEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEE
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEE
Confidence            479999999999999999999877 3324568655 78999999999999988999999999999999999999999999


Q ss_pred             EEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----
Q 014492          174 VDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----  246 (423)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----  246 (423)
                      +++.|+|+.+...++..|++++.+|.+   +++.+|++++++.+. .++++|++++|+||||.+++.+++++|++.    
T Consensus       106 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~  184 (381)
T 1v2d_A          106 VVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGERELEAIARLARAH  184 (381)
T ss_dssp             EEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred             EEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-cCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc
Confidence            999999999999999999999999975   567899999999996 689999999999999999997777666653    


Q ss_pred             CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHHHHH
Q 014492          247 PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAA  322 (423)
Q Consensus       247 ~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~  322 (423)
                      |+++|+||+|.++.++..  ....+ ..++++++.|+||.+|++|+|+||+++++++++.+.....  .++.+.+.+.++
T Consensus       185 ~~~li~De~~~~~~~g~~~~~~~~~-~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  263 (381)
T 1v2d_A          185 DLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGV  263 (381)
T ss_dssp             TCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHH
T ss_pred             CCEEEEEcCccccccCCCCCCHHHh-cCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHH
Confidence            999999999998865221  22222 5678999999999999999999999999998888876543  578899999998


Q ss_pred             HHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC--
Q 014492          323 CAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE--  397 (423)
Q Consensus       323 ~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~--  397 (423)
                      ..+|+.   .+++++.+++++++++++.+.|++.++....+.+++|+|+++++. +   +.+.|.++||.++++..+.  
T Consensus       264 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-~---~~~~l~~~gi~v~~g~~~~~~  339 (381)
T 1v2d_A          264 AEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGW-D---AFRLVEEARVALIPASAFYLE  339 (381)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTC-C---HHHHHHHTCEECEEGGGGCSS
T ss_pred             HHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChH-h---HHHHHHhCCEEEecchHhCCC
Confidence            888874   467888999999999999999988754334456688999999743 2   6666779999999876532  


Q ss_pred             --CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          398 --LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       398 --~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                        .++++||+++..  .+++.+++++|
T Consensus       340 ~~~~~~iRi~~~~~--~~~i~~~~~~l  364 (381)
T 1v2d_A          340 DPPKDLFRFAFCKT--EEELHLALERL  364 (381)
T ss_dssp             SCCTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             CCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence              468999999862  35666666554

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1.8e-42  Score=343.15  Aligned_cols=325  Identities=19%  Similarity=0.304  Sum_probs=269.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC---CCCCCCc-chHHHHHHHHHHhC------CCC-CcEEEeCCHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF---PYIYPDP-ESRRLRAALAKDSG------LES-DHILVGCGADELIDLI  162 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~---~~~Y~~~-g~~~lr~~ia~~~g------~~~-~~i~~t~G~~~al~~~  162 (423)
                      .++|+|+.|++++++++.+.+++.+. ..   ..+|++. +..++|++++++++      +++ ++|++|+|+++++..+
T Consensus        28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~  107 (422)
T 3fvs_A           28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTA  107 (422)
T ss_dssp             SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHH
T ss_pred             CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHH
Confidence            46799999999999999999998763 22   2578654 78899999999875      666 6999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC------------CCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS------------DFSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~------------~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      ++.++++||+|+++.|+|..+...++..|++++.+|.+.            ++.+|++++++.++ .++++|++++||||
T Consensus       108 ~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~np  186 (422)
T 3fvs_A          108 FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNNP  186 (422)
T ss_dssp             HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC-TTEEEEEEESSCTT
T ss_pred             HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC-CCceEEEECCCCCC
Confidence            999999999999999999999999999999999999653            45689999999997 68999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~  302 (423)
                      ||.+++.+++++|++.    |+++|+||+|.++.+++.   ....+. ..+++++++|+||.||++|+|+||++++++++
T Consensus       187 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~  266 (422)
T 3fvs_A          187 LGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIM  266 (422)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHH
Confidence            9999988777777664    999999999999876542   222222 35789999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492          303 EYLWRAKQ--PYNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  372 (423)
Q Consensus       303 ~~l~~~~~--~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~  372 (423)
                      +.+.....  .++.+++.+.++..++++        .+++++.+++++++++++.+.|++++.....|++++|+|++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~  346 (422)
T 3fvs_A          267 KHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISD  346 (422)
T ss_dssp             HHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHH
T ss_pred             HHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechh
Confidence            98876644  578899999999988863        56889999999999999999999986434678899999998852


Q ss_pred             ---CCC----------HHHHHHHHH-hCCcEEEeCCCC-------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 ---GMD----------AKKLKDDLA-KMGVMIRHYNNK-------ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 ---~~~----------~~~l~~~L~-~~gI~v~~~~~~-------~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                         ..+          ..++++.|. ++||.+.+++.+       ...+++||+++..  .+++.+++++|
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l  415 (422)
T 3fvs_A          347 FKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKD--EATLQAMDEKL  415 (422)
T ss_dssp             HHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCC--HHHHHHHHHHH
T ss_pred             hcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence               011          557888765 689999997653       3578999999873  36677776665

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=6.3e-42  Score=340.09  Aligned_cols=325  Identities=20%  Similarity=0.277  Sum_probs=268.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC----CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF----PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~----~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~  161 (423)
                      .++|+|+.+.+++++++.+.+++.+. ..    ...|+.. +..++|+++++++    |  ++++ +|++|+|+++++..
T Consensus        37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~  116 (429)
T 1yiz_A           37 YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA  116 (429)
T ss_dssp             HCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHH
Confidence            35799999999999999999998762 22    2568654 6889999999986    6  5678 99999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (423)
                      ++++++++||+|+++.|+|+.+...++..|++++.+|.+.          ++.+|++++++.+. .++++|++++|+|||
T Consensus       117 ~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~npt  195 (429)
T 1yiz_A          117 TIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPL  195 (429)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTT
T ss_pred             HHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCC
Confidence            9999999999999999999999999999999999999654          46799999999996 689999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      |.+++.+++++|++.    |+++|+||+|.++.+++.   ....+. ..++++++.|+||.+|++|+|+||+++++++++
T Consensus       196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~  275 (429)
T 1yiz_A          196 GKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLK  275 (429)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHH
Confidence            999997777776654    999999999999876432   222222 356899999999999999999999999999999


Q ss_pred             HHHHhc--CCCCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC
Q 014492          304 YLWRAK--QPYNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG  373 (423)
Q Consensus       304 ~l~~~~--~~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~  373 (423)
                      .+....  ..++.+++.|.++.++|+.        .+++++.+++++++++++.+.|+++++....+.+++|+|+++++.
T Consensus       276 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~  355 (429)
T 1yiz_A          276 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL  355 (429)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSS
T ss_pred             HHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccc
Confidence            887654  3578899999999988876        578899999999999999999988754334566789999999753


Q ss_pred             ------------CCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 ------------MDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ------------~~~~~l~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                                  .+..++.+.|. ++||.++++..+.       .++++||+++..  .+++.+++++|
T Consensus       356 ~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~--~e~i~~~l~~l  422 (429)
T 1yiz_A          356 DSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKK--DENLQKAAEIL  422 (429)
T ss_dssp             CTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             cccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence                        35678888887 8999999875432       268999999853  35676666655

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=5.6e-42  Score=336.99  Aligned_cols=324  Identities=15%  Similarity=0.179  Sum_probs=251.1

Q ss_pred             hHHHHHHhCC-CCCCeeEcCCCCC-----CCCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHh-C-----CC
Q 014492           83 FEVLSIQLGR-KPEDIVKIDANEN-----PYGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LE  145 (423)
Q Consensus        83 ~~~~~~~~~~-~~~~~i~l~~~~~-----~~~~~~~v~~al~~~----~~~~~Y-~~~g~~~lr~~ia~~~-g-----~~  145 (423)
                      +..+..++.. ...++|+|+.|+.     ++.+++.+.++.. +    ...++| |..|.++||+++++++ +     ++
T Consensus        16 i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~   94 (405)
T 3k7y_A           16 ILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIE   94 (405)
T ss_dssp             HHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTT
T ss_pred             HHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCcccc
Confidence            4444444443 2357899999962     2455788888855 3    233678 5569999999999987 2     23


Q ss_pred             CCc--EEEeCCHHHHHHHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecC-C-CCCCCCHHHHHHHhhc-CC
Q 014492          146 SDH--ILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER-EK  218 (423)
Q Consensus       146 ~~~--i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~-~~  218 (423)
                      +++  |++|+|+++++.+++..++.  | |+|++++|+|+.|...++..|++++.+|. + +++++|++++++.+.+ .+
T Consensus        95 ~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~  173 (405)
T 3k7y_A           95 DKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPN  173 (405)
T ss_dssp             TTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCS
T ss_pred             ccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCC
Confidence            454  59999999999999998887  8 99999999999999999999999999996 3 3589999999999974 35


Q ss_pred             ceEEEEcCC-CCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhh-hhccCCcEEEEccChhhhcc
Q 014492          219 PKCIFLTSP-NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       219 ~~~i~l~~p-~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~i~S~SK~~g~  287 (423)
                      ++++++++| |||||.+++.+++++|++.    +++||+||+|.+|.+++.     ... .....+++++++||||.|++
T Consensus       174 ~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l  253 (405)
T 3k7y_A          174 GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSL  253 (405)
T ss_dssp             SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCC
T ss_pred             CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCC
Confidence            678888755 8999999999999998875    999999999999986531     122 22346799999999999999


Q ss_pred             cCcccccccc---CHHHHHHHH----Hh-cCCC-CCcHHHHHHHHHHhCCh----HH---HHHHHHHHHHHHHHHHHHHc
Q 014492          288 AGLRVGYGAF---PLSIIEYLW----RA-KQPY-NVSVAAEVAACAALQNP----IY---LEKVKEALIKERERLFKLLK  351 (423)
Q Consensus       288 ~G~R~G~i~~---~~~~~~~l~----~~-~~~~-~~~~~~~~a~~~~l~~~----~~---~~~~~~~~~~~~~~l~~~L~  351 (423)
                      +|+|+||+++   ++++++++.    .. ...+ +.+.++|.++..+|+++    .|   +++++++++++|+.+.+.|+
T Consensus       254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~  333 (405)
T 3k7y_A          254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE  333 (405)
T ss_dssp             TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999853   666665543    22 2334 56788999999899874    23   45667789999999999999


Q ss_pred             ----cCCC----CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          352 ----DVPF----LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       352 ----~~~~----~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                          +++.    ....|.+|+|+|+.+++     ++++.|.++||.+.|++        |||++  ..++++++.++|++
T Consensus       334 ~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----~~~~~L~~~gV~v~p~~--------Ris~a~~~~~~i~~~~~~i~~  400 (405)
T 3k7y_A          334 TYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----KIAEHLKTHHIYIINNG--------RINVSGITKNNVDYIADKICL  400 (405)
T ss_dssp             HHGGGGTCCCCGGGGSSCCSSEEECGGGG-----GGTTTTTTTTEECCTTS--------EEEGGGCCTTHHHHHHHHHHH
T ss_pred             hhhhhcCCCCCCccccCCceEEEecCCCH-----HHHHHHHHCCEeecCCC--------eEEEeccCHHHHHHHHHHHHH
Confidence                7752    23467889999998752     44566678899999864        99997  35566777777665

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=2.3e-42  Score=345.37  Aligned_cols=320  Identities=17%  Similarity=0.239  Sum_probs=259.3

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-------CCCCCCCC-cchHHHHHHHHHHh----CCCCCcEEEeCCHHHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-------KFPYIYPD-PESRRLRAALAKDS----GLESDHILVGCGADELID  160 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-------~~~~~Y~~-~g~~~lr~~ia~~~----g~~~~~i~~t~G~~~al~  160 (423)
                      ++.++|+|+.|+++++++|.+.+++.+.       ...++|+. .+..+||+++++++    ++++++|++|+|+++++.
T Consensus        67 ~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~  146 (449)
T 3qgu_A           67 PDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIA  146 (449)
T ss_dssp             TTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred             CCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHH
Confidence            4567999999999999999999888652       12356844 67899999999998    788899999999999999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCe----------EEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCC
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPN  228 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~  228 (423)
                      .+ ..++++||.|+++.|+|..+...++..|++          ++.+|.++  ++..|++++      .++++|++++||
T Consensus       147 ~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~l~~p~  219 (449)
T 3qgu_A          147 RI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------KRTDIIFFCSPN  219 (449)
T ss_dssp             HH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC------CCCSEEEEESSC
T ss_pred             HH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc------CCCCEEEEeCCC
Confidence            98 778999999999999999999999999998          99998654  344454321      578999999999


Q ss_pred             CCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHH
Q 014492          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       229 NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      ||||.+++.+++++|++.    |+++|+||+|.+|.+++.   ....+. ..++++++.||||.||++|+|+||++++++
T Consensus       220 NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~  299 (449)
T 3qgu_A          220 NPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA  299 (449)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT
T ss_pred             CCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH
Confidence            999999999988888764    999999999999876542   222222 256789999999999999999999999887


Q ss_pred             HHH--------HHHHh--cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEE
Q 014492          301 IIE--------YLWRA--KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC  368 (423)
Q Consensus       301 ~~~--------~l~~~--~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~  368 (423)
                      +++        .+...  ...++.+.++|.++.+++++  .+++++++++++++++++.+.|+++++....+.+++|+|+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  379 (449)
T 3qgu_A          300 LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWV  379 (449)
T ss_dssp             CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEE
T ss_pred             HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEE
Confidence            764        23222  23357899999999999986  3678899999999999999999988654445677999999


Q ss_pred             EeCCCCCHHHHHHHHHh-CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          369 EVTSGMDAKKLKDDLAK-MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       369 ~~~~~~~~~~l~~~L~~-~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +++ +.+..++++.|++ +||.++++..+  ..++++||++...  .+++.+++++|
T Consensus       380 ~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~--~e~i~~~l~~l  433 (449)
T 3qgu_A          380 GFP-GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGS--RENILEAVRRF  433 (449)
T ss_dssp             ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSC--HHHHHHHHHHH
T ss_pred             ECC-CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            998 7889999988885 59999997653  3468999997642  24566555554

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=4.2e-42  Score=340.82  Aligned_cols=321  Identities=16%  Similarity=0.175  Sum_probs=258.1

Q ss_pred             eeEcCCCCCC---CCCCHHHHHHHhcC----C--CCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHHHH
Q 014492           97 IVKIDANENP---YGPPPEVREALGQL----K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELI--DLIMR  164 (423)
Q Consensus        97 ~i~l~~~~~~---~~~~~~v~~al~~~----~--~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al--~~~~~  164 (423)
                      +|+|+.|+++   +++++.+.+++.+.    .  ...+|+++ |.++||+++++++++++++|++|+|+++++  .++++
T Consensus        34 ~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~  113 (422)
T 3d6k_A           34 SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISW  113 (422)
T ss_dssp             CEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHH
T ss_pred             eEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHH
Confidence            6999999998   88888888877642    1  13578765 699999999999999999999999999987  77778


Q ss_pred             HhcCC------------CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE-EcCCCCCc
Q 014492          165 CVLDP------------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPD  231 (423)
Q Consensus       165 ~l~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPt  231 (423)
                      .+..+            +|+|+++.|+|..|...++..|++++.+|.+++ ++|++++++.+++.++++|+ +++|||||
T Consensus       114 ~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~~~~~NPt  192 (422)
T 3d6k_A          114 SYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE-GPDMGVVRELVKDPQVKGMWTVPVFGNPT  192 (422)
T ss_dssp             HHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHTSTTEEEEEECCSSCTTT
T ss_pred             HhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC-CCCHHHHHHHHhcCCCeEEEEcCCCCCCC
Confidence            77765            347999999999999999999999999997654 59999999999745789988 67999999


Q ss_pred             CcCCCHHHHHHHHc----C-CCEEEEccCCcc--ccCCCc---hh-hh---hccCCcEEEEccChhhhcccCcccccccc
Q 014492          232 GSIINDEDLLKILE----M-PILVVLDEAYTE--FSGLES---RM-EW---VKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       232 G~~~~~~~l~~i~~----~-~~~li~Deay~~--~~~~~~---~~-~~---~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      |.+++.+++++|++    . |++||+||+|.+  |.+.+.   .. ..   .+..+++++++||||. +++|+|+||+++
T Consensus       193 G~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~  271 (422)
T 3d6k_A          193 GVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFAS  271 (422)
T ss_dssp             CCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEEC
T ss_pred             CCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEe
Confidence            99999997777664    4 899999999985  543321   12 11   2356889999999998 779999999999


Q ss_pred             CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC-h---HHHHHHHHHHHHHHHHHHHHHcc----CCCCe-ecCCCceEE
Q 014492          298 PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-P---IYLEKVKEALIKERERLFKLLKD----VPFLN-PYPSYSNFI  366 (423)
Q Consensus       298 ~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~-~---~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~~~  366 (423)
                      ++++++.+......  ++.+.++|.++..+|++ .   +++++.++.++++++++.+.|.+    ++++. ..|++++|+
T Consensus       272 ~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~  351 (422)
T 3d6k_A          272 SKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFI  351 (422)
T ss_dssp             CHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCE
T ss_pred             CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEE
Confidence            99999988876543  67899999999999998 3   56778888899999988888764    44444 467789999


Q ss_pred             EEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEec--ChhhHHHHHHHHh
Q 014492          367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVG--KPEHTDALMECLM  420 (423)
Q Consensus       367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~--~~~~~~~l~~al~  420 (423)
                      |+++++. +...+.+.|.++||.+++++. +     ..++++||+++  +.++++++.+.|+
T Consensus       352 ~~~~~~~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~  412 (422)
T 3d6k_A          352 SVDVVPG-TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFA  412 (422)
T ss_dssp             EEEESTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHH
T ss_pred             EEECCCC-CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence            9999854 677888888899999999432 3     24689999998  4444444444443

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=6.1e-42  Score=336.77  Aligned_cols=325  Identities=21%  Similarity=0.319  Sum_probs=264.7

Q ss_pred             CCeeEcCCCCCCCC--CCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           95 EDIVKIDANENPYG--PPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~~-~~----~~~Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      +++|+|+.+.++..  +++++.+++.+. ..    ...|++ .+..++|+++++++|+++++|++|+|+++++..+++++
T Consensus        32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~  111 (397)
T 2zyj_A           32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVF  111 (397)
T ss_dssp             TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred             CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHh
Confidence            46799998865432  567888887652 11    256754 47899999999999988899999999999999999999


Q ss_pred             cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEE-EcCCCCCcCcCCCHHHHHHHHc
Q 014492          167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILE  245 (423)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~-l~~p~NPtG~~~~~~~l~~i~~  245 (423)
                      +++||+|+++.|+|+.+...++..|++++.+|.+++ ++|++++++.+++.++++|+ +++|+||||.+++.+++++|++
T Consensus       112 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~  190 (397)
T 2zyj_A          112 LDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQ  190 (397)
T ss_dssp             CCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC-CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence            999999999999999999999999999999997554 58999999999755789885 6799999999999997776665


Q ss_pred             C----CCEEEEccCCccccCCCc---hhhhhccC---CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CC
Q 014492          246 M----PILVVLDEAYTEFSGLES---RMEWVKKH---DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN  313 (423)
Q Consensus       246 ~----~~~li~Deay~~~~~~~~---~~~~~~~~---~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~  313 (423)
                      .    |+++|+||+|.++.+.+.   ....++..   +++++++|+||.+| +|+|+||+++++++++.+......  ++
T Consensus       191 ~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~  269 (397)
T 2zyj_A          191 MVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLH  269 (397)
T ss_dssp             HHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSS
T ss_pred             HHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCC
Confidence            3    999999999999876432   22333333   78999999999999 999999999999999888765443  56


Q ss_pred             CcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHcc-CC-CCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014492          314 VSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKD-VP-FLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGV  388 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI  388 (423)
                      .+.+++.++..+|++.  +++++.+++++++++++.+.|++ ++ ++.+ .|++++|+|++++++.+..++.+.|.++||
T Consensus       270 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi  349 (397)
T 2zyj_A          270 TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENV  349 (397)
T ss_dssp             CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTE
T ss_pred             CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCC
Confidence            7999999999999876  56888899999999999999987 45 3554 577899999999877788999999998899


Q ss_pred             EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          389 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++++..+    ..++++||+++.. +.+++.+++++|
T Consensus       350 ~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l  386 (397)
T 2zyj_A          350 AFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRL  386 (397)
T ss_dssp             EEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred             EEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence            99987653    2468999999864 234555555443

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=1.3e-41  Score=336.33  Aligned_cols=325  Identities=17%  Similarity=0.211  Sum_probs=264.8

Q ss_pred             CCeeEcCCCCC----CCCCCHHHHHHHhcC-C--CCCCCCC-cchHHHHHHHHHHhC------------CCCCcEEEeCC
Q 014492           95 EDIVKIDANEN----PYGPPPEVREALGQL-K--FPYIYPD-PESRRLRAALAKDSG------------LESDHILVGCG  154 (423)
Q Consensus        95 ~~~i~l~~~~~----~~~~~~~v~~al~~~-~--~~~~Y~~-~g~~~lr~~ia~~~g------------~~~~~i~~t~G  154 (423)
                      .++|+|+.+.+    .+++++.+.+++.+. .  ...+|++ .+..++|++++++++            +++++|++|+|
T Consensus        33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g  112 (416)
T 1bw0_A           33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSG  112 (416)
T ss_dssp             SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESH
T ss_pred             CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCC
Confidence            56899999975    578889999988762 2  2256855 478999999999998            77899999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      +++++..++++++++||+|+++.|+|+.+...++..|++++.+|.+.  ++.+|++++++.+. .+++++++++|+||||
T Consensus       113 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG  191 (416)
T 1bw0_A          113 GSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNPCG  191 (416)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhc-cCCeEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999999998643  46799999999997 5789999999999999


Q ss_pred             cCCCHHHHHHHHc---C-CCEEEEccCCccccCCCc----h---hhhhccCCcEEEEccChhhhcccCccccccccCHH-
Q 014492          233 SIINDEDLLKILE---M-PILVVLDEAYTEFSGLES----R---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-  300 (423)
Q Consensus       233 ~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~----~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-  300 (423)
                      .+++.+++++|++   . |++||+||+|.++.+.+.    .   ...+...+++++++|+||.|+++|+|+||++++++ 
T Consensus       192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~  271 (416)
T 1bw0_A          192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH  271 (416)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred             cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence            9999666666655   3 999999999999875432    1   22223345689999999999999999999998653 


Q ss_pred             -----HHHHHHHhc-CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC
Q 014492          301 -----IIEYLWRAK-QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT  371 (423)
Q Consensus       301 -----~~~~l~~~~-~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~  371 (423)
                           +...+.+.. ..++.++++|.++.++|+.  .+++++.+++++++++++.+.|++++++.+ .|.+++|+|++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~  351 (416)
T 1bw0_A          272 GNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRID  351 (416)
T ss_dssp             CSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEEC
T ss_pred             hhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCC
Confidence                 333333322 3578899999999999985  678899999999999999999998865554 4667899999986


Q ss_pred             C-----CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          372 S-----GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       372 ~-----~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .     ..+..++.+.|. ++||.++++..+..++++||+++..+  +++.+++++|
T Consensus       352 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~--e~l~~~l~~l  406 (416)
T 1bw0_A          352 LEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPV--EVYREAVERI  406 (416)
T ss_dssp             GGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            3     257888999885 89999999876656789999997543  5677777765

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=1e-41  Score=338.68  Aligned_cols=320  Identities=17%  Similarity=0.180  Sum_probs=263.8

Q ss_pred             CCeeEcCCCCC-CCCCCHHH--HHHHhcC-C--CCCCCCCc-chHHHHHHHHHHh-----CCCCCc---EEEeCCHHHHH
Q 014492           95 EDIVKIDANEN-PYGPPPEV--REALGQL-K--FPYIYPDP-ESRRLRAALAKDS-----GLESDH---ILVGCGADELI  159 (423)
Q Consensus        95 ~~~i~l~~~~~-~~~~~~~v--~~al~~~-~--~~~~Y~~~-g~~~lr~~ia~~~-----g~~~~~---i~~t~G~~~al  159 (423)
                      +++|+|+.|++ +++.+|.+  .+++.+. .  ...+|++. |..++|+++++++     ++++++   |++|+|+++++
T Consensus        47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al  126 (430)
T 2x5f_A           47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGL  126 (430)
T ss_dssp             TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHH
T ss_pred             CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHH
Confidence            56899999999 88877766  7776653 2  23678665 7899999999999     888889   99999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHH-CCCeEEEecCCC-CCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCC
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKS-DFSLNVELIADAVERE--KPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~~-~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~  235 (423)
                      ..++++++++||+|+++.|+|..+...++. .|++++.+|.++ ++.+|++++++.+++.  +++++++++||||||.++
T Consensus       127 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~  206 (430)
T 2x5f_A          127 SLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTP  206 (430)
T ss_dssp             HHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCC
T ss_pred             HHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcC
Confidence            999999999999999999999999999999 999999999654 4689999999999742  789999999999999999


Q ss_pred             CHHHHHHHHc---------CCCEEEEccCCccccCCCc---hhh-hhcc-CCc---EEEEccChhhhcccCcccccccc-
Q 014492          236 NDEDLLKILE---------MPILVVLDEAYTEFSGLES---RME-WVKK-HDN---LIVLRTFSKRAGLAGLRVGYGAF-  297 (423)
Q Consensus       236 ~~~~l~~i~~---------~~~~li~Deay~~~~~~~~---~~~-~~~~-~~~---~i~i~S~SK~~g~~G~R~G~i~~-  297 (423)
                      +.+++++|++         .|+++|+||+|.++.+++.   ... .+.. .++   +++++|+||.||++|+|+||+++ 
T Consensus       207 ~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~  286 (430)
T 2x5f_A          207 THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFG  286 (430)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEB
T ss_pred             CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEe
Confidence            9766666553         5799999999999876432   222 3333 677   99999999999999999999999 


Q ss_pred             --CHHHHHHHHHhc------CCCCCcHHHHHHHHHHhC-ChHHHHH---HHHHHHHHHHHHHHHHc----cCCCCee-cC
Q 014492          298 --PLSIIEYLWRAK------QPYNVSVAAEVAACAALQ-NPIYLEK---VKEALIKERERLFKLLK----DVPFLNP-YP  360 (423)
Q Consensus       298 --~~~~~~~l~~~~------~~~~~~~~~~~a~~~~l~-~~~~~~~---~~~~~~~~~~~l~~~L~----~~~~~~~-~p  360 (423)
                        ++++++.+....      ..++.+.++|.++..+|+ +.+|.+.   .+++++++++++.+.|+    +.+ +.+ .+
T Consensus       287 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~  365 (430)
T 2x5f_A          287 TSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-WQAYDF  365 (430)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-EEECCC
T ss_pred             cCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ceeeCC
Confidence              999998887654      347899999999999998 8766666   89999999999999998    554 443 45


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHHh-CCcEEEeCCCCCCCCeEEEEec-C-hhhHHHHHHHHh
Q 014492          361 SYSNFILCEVTSGMDAKKLKDDLAK-MGVMIRHYNNKELKGYVRVSVG-K-PEHTDALMECLM  420 (423)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~l~~~L~~-~gI~v~~~~~~~~~~~iRis~~-~-~~~~~~l~~al~  420 (423)
                      .+++|+|++++ +.+..++.+.|.+ +||.++++    .++++||+++ . .++++++.++|+
T Consensus       366 ~~g~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~  423 (430)
T 2x5f_A          366 NSGYFMAIKVH-DVDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIA  423 (430)
T ss_dssp             CBSSEEEEEES-SSCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHH
T ss_pred             CceEEEEeCCC-CCCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHH
Confidence            56788999998 7789999999996 99999997    3689999998 4 333444444443

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=3e-41  Score=330.96  Aligned_cols=324  Identities=20%  Similarity=0.240  Sum_probs=261.4

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHH-HHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRR-LRAALAKDS----G--LESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~-lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      +++|+|+.+++++++++++.+++.+. .. ...|++. ..+ +|+++++++    |  +++++|++|+|+++++..++++
T Consensus        28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~  106 (390)
T 1d2f_A           28 ADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW-KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ  106 (390)
T ss_dssp             --CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS-CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred             CCeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC-ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence            46899999999999999999998773 22 3567665 677 999999986    5  6788999999999999999999


Q ss_pred             hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      ++++||+|+++.|+|..+...++..|++++.+|.+.   +|.+|++++++.+++.++++|++++|+||||.+++.+++++
T Consensus       107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~  186 (390)
T 1d2f_A          107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI  186 (390)
T ss_dssp             SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred             hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence            999999999999999999999999999999999643   34589999999997558999999999999999999766666


Q ss_pred             HHc---C-CCEEEEccCCccccCCCch---hhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcC---C
Q 014492          243 ILE---M-PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQ---P  311 (423)
Q Consensus       243 i~~---~-~~~li~Deay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~---~  311 (423)
                      |++   . |+++|+||+|.++.+.+..   ...+...-... +.|+||.+|++|+|+||++++ +++++.+.....   .
T Consensus       187 l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  265 (390)
T 1d2f_A          187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDG  265 (390)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcc
Confidence            554   3 9999999999998764321   11121110023 999999999999999999985 788888776543   3


Q ss_pred             C-CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCCC-CCHHHHHHHHH-h
Q 014492          312 Y-NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSG-MDAKKLKDDLA-K  385 (423)
Q Consensus       312 ~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~~-~~~~~l~~~L~-~  385 (423)
                      + +.+.+++.++.++++. .+++++.+++++++++++.+.|++ ++++.+. +.+++++|+++++. .+..++.+.|. +
T Consensus       266 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  345 (390)
T 1d2f_A          266 LSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQ  345 (390)
T ss_dssp             CCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHT
T ss_pred             cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHHHHHHHH
Confidence            4 7899999988888875 578899999999999999999988 6655544 44556778999753 67889999998 6


Q ss_pred             CCcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +||.++++..+.  .++++||+++..+  +++.+++++|
T Consensus       346 ~gi~v~~g~~f~~~~~~~~Ris~~~~~--~~l~~~l~~l  382 (390)
T 1d2f_A          346 EKVAIMPGYTYGEEGRGFVRLNAGCPR--SKLEKGVAGL  382 (390)
T ss_dssp             TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             cCEEeeCccccCCCCCCeEEEEecCCH--HHHHHHHHHH
Confidence            899999976532  4689999999753  6788887765

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=1.5e-41  Score=337.06  Aligned_cols=347  Identities=18%  Similarity=0.276  Sum_probs=264.8

Q ss_pred             hHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHH--H-------------HHHHhcCCCCCCC-CCc
Q 014492           66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPE--V-------------REALGQLKFPYIY-PDP  129 (423)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~--v-------------~~al~~~~~~~~Y-~~~  129 (423)
                      ++++++..+.++ ++..+...+...   +.++|+|+.|.++....|.  .             .++...   ...| +..
T Consensus         6 ~~s~~~~~~~~~-~~~~~~~~~~~~---~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~   78 (425)
T 2r2n_A            6 FITAASAARNPS-PIRTMTDILSRG---PKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR---ALQYSPSA   78 (425)
T ss_dssp             GSCHHHHTCCCC-SGGGHHHHHHHS---CTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH---HTSCCCTT
T ss_pred             HHHHHHhcCCCc-hHHHHHHHhhcC---CCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh---hcCCCCCC
Confidence            445556555555 233333333322   2467999999887644331  0             011111   1357 445


Q ss_pred             chHHHHHHHHHHh----CCCC---------CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEE
Q 014492          130 ESRRLRAALAKDS----GLES---------DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK  196 (423)
Q Consensus       130 g~~~lr~~ia~~~----g~~~---------~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~  196 (423)
                      |.+++|+++++++    |++.         ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.
T Consensus        79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~  158 (425)
T 2r2n_A           79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIIN  158 (425)
T ss_dssp             CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEE
T ss_pred             CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEE
Confidence            8889999999885    7643         69999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCCHHHHHHHhhc-----------CCceEEEE-cCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCcccc
Q 014492          197 VPRKSDFSLNVELIADAVER-----------EKPKCIFL-TSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS  260 (423)
Q Consensus       197 v~~~~~~~~d~~~l~~~i~~-----------~~~~~i~l-~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~  260 (423)
                      +|.+++ ++|+++|++.+++           .++++|++ ++||||||.+++.+++++|++.    |++||+||+|.++.
T Consensus       159 v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~  237 (425)
T 2r2n_A          159 VASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ  237 (425)
T ss_dssp             ECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred             eCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence            997543 6999999998862           36888877 5999999999999977776653    99999999999887


Q ss_pred             CCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC------h
Q 014492          261 GLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN------P  329 (423)
Q Consensus       261 ~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~------~  329 (423)
                      +.+.   ....++..+++++++||||.++ +|+|+||+++++++++.+.....  .++.+.++|.++..+|++      .
T Consensus       238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~  316 (425)
T 2r2n_A          238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFM  316 (425)
T ss_dssp             SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHH
Confidence            6432   2333444678999999999998 99999999999999998887653  478899999999999976      2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcc-CCCC-e-ecCCCceEEEEEeCCCCCHHH-HHHHHHhCCcEEEeCCCCC-----CCC
Q 014492          330 IYLEKVKEALIKERERLFKLLKD-VPFL-N-PYPSYSNFILCEVTSGMDAKK-LKDDLAKMGVMIRHYNNKE-----LKG  400 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~-~~~~-~-~~p~~~~~~~~~~~~~~~~~~-l~~~L~~~gI~v~~~~~~~-----~~~  400 (423)
                      +|+++++++++++++++.+.|++ ++++ . ..|++|+|+|+++++..+..+ +.+.|.++||.++++..+.     ..+
T Consensus       317 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~  396 (425)
T 2r2n_A          317 AHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSP  396 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCC
Confidence            56788899999999999999987 5544 3 357889999999986556556 5778889999999876532     358


Q ss_pred             eEEEEecChhhHHHHHHHHhhh
Q 014492          401 YVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       401 ~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++||+++.. +.+++.+++++|
T Consensus       397 ~iRis~~~~-~~~~i~~~~~~l  417 (425)
T 2r2n_A          397 YLRASFSSA-SPEQMDVAFQVL  417 (425)
T ss_dssp             EEEEECSSC-CHHHHHHHHHHH
T ss_pred             EEEEEeCCC-CHHHHHHHHHHH
Confidence            999999732 225555555544

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.5e-41  Score=333.80  Aligned_cols=348  Identities=20%  Similarity=0.276  Sum_probs=275.4

Q ss_pred             HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCC-cchHHHHHHHHHHhC-
Q 014492           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDSG-  143 (423)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y~~-~g~~~lr~~ia~~~g-  143 (423)
                      ++++..+.++ +...+.....+....++++|+|+.+++++++++.+.+++ + +.. ...|++ .+..++|++++++++ 
T Consensus        17 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~   94 (409)
T 2gb3_A           17 SDRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKR   94 (409)
T ss_dssp             CHHHHSCCCC-TTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHhhcCCcc-HHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence            4444444444 233333333344344567899999999988889999999 6 432 246865 468899999999973 


Q ss_pred             -----CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC--CCCCCHHHHHHHhhc
Q 014492          144 -----LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVER  216 (423)
Q Consensus       144 -----~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~  216 (423)
                           +++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|++++.+|.+.  ++.+ +++|++.+. 
T Consensus        95 ~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~-  172 (409)
T 2gb3_A           95 RQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN-  172 (409)
T ss_dssp             TSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC-
T ss_pred             HhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC-
Confidence                 5678999999999999999999999999999999999999999999999999999763  4445 889999886 


Q ss_pred             CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhhhcc-CCcEEEEccChhhhcccCcc
Q 014492          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLR  291 (423)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R  291 (423)
                      .++++|++++|+||||.+++.+++++|++.    |+++|+||+|..+.+.+.....+.. .+++++++|+||.+|++|+|
T Consensus       173 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r  252 (409)
T 2gb3_A          173 ERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGAR  252 (409)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGC
T ss_pred             cCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccce
Confidence            589999999999999999998777776653    9999999999988764322222222 46799999999999999999


Q ss_pred             ccccccCH-HHHHHHHHhcCCC-CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEE
Q 014492          292 VGYGAFPL-SIIEYLWRAKQPY-NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFIL  367 (423)
Q Consensus       292 ~G~i~~~~-~~~~~l~~~~~~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~  367 (423)
                      +||+++++ ++++.+......+ +.+++.+.++.++|+. .+++++.+++++++++++.+.|+++++.. ..|.+++|+|
T Consensus       253 ~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  332 (409)
T 2gb3_A          253 VGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYIT  332 (409)
T ss_dssp             CEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEE
T ss_pred             EEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEE
Confidence            99999988 8988887765545 7899999999999965 57788999999999999999998875333 3466788999


Q ss_pred             EEeCCCCCHHHHHHHHHhC------CcEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          368 CEVTSGMDAKKLKDDLAKM------GVMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       368 ~~~~~~~~~~~l~~~L~~~------gI~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++++ +.+..++.+.|.++      ||.++++..+     ..++++||+++..+  +++.+++++|
T Consensus       333 ~~~~-~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~--e~i~~~~~~l  395 (409)
T 2gb3_A          333 AELP-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEK--DLLSRAIDVL  395 (409)
T ss_dssp             EECS-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCH--HHHHHHHHHH
T ss_pred             EEeC-CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCH--HHHHHHHHHH
Confidence            9997 67889999999876      9999987543     23689999998432  4555555543

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=1.2e-40  Score=326.32  Aligned_cols=330  Identities=19%  Similarity=0.309  Sum_probs=266.9

Q ss_pred             HHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCcchHHHHHHHH----HHhC--CCCCcEEEeCCHHH
Q 014492           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDPESRRLRAALA----KDSG--LESDHILVGCGADE  157 (423)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~g~~~lr~~ia----~~~g--~~~~~i~~t~G~~~  157 (423)
                      ..++++  +.++|+|+.++++++++|++.+++.+. .. .+.|+. +..+++++++    +++|  +++++|++|+|+++
T Consensus        25 ~~~~~~--~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~  101 (391)
T 4dq6_A           25 MEKKYG--TNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT-RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIP  101 (391)
T ss_dssp             HHHHHS--CSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred             cccccC--CCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHH
Confidence            445565  367899999999999999999999873 22 355644 2344555555    4567  67899999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC----CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      ++..++++++++||+|+++.|+|..+...++..|++++.+|.+    .++.+|++++++.+++  +++|++++|+||||.
T Consensus       102 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~~p~nptG~  179 (391)
T 4dq6_A          102 AISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILCNPHNPVGR  179 (391)
T ss_dssp             HHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEESSBTTTTB
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEECCCCCCCc
Confidence            9999999999999999999999999999999999999999975    2345899999999974  999999999999999


Q ss_pred             CCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccCH-HHHH
Q 014492          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIE  303 (423)
Q Consensus       234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~  303 (423)
                      +++.+++++|++.    |+++|+||+|.++.+.+.   ....+..  .++++++.|+||.+|++|+|+||+++++ ++++
T Consensus       180 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~  259 (391)
T 4dq6_A          180 VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYK  259 (391)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHH
T ss_pred             CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHH
Confidence            9999888888664    999999999999876442   2222221  4788999999999999999999999875 8888


Q ss_pred             HHHHhc---CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCC-CCCH
Q 014492          304 YLWRAK---QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTS-GMDA  376 (423)
Q Consensus       304 ~l~~~~---~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~-~~~~  376 (423)
                      .+....   ..++.+.+++.++..+++. .+++++.+++++++++++.+.|++ ++++.+. +.+++++|++++. +.+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (391)
T 4dq6_A          260 LLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSD  339 (391)
T ss_dssp             HHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCH
T ss_pred             HHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCH
Confidence            777653   3357889999988888875 577899999999999999999987 6666654 5556777899985 6789


Q ss_pred             HHHHHHHHhC-CcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          377 KKLKDDLAKM-GVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       377 ~~l~~~L~~~-gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.+.|.++ ||.++++..+  ..++++||+++..+  +++.+++++|
T Consensus       340 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~--~~i~~~l~~l  386 (391)
T 4dq6_A          340 EELESILVQKGKVALNQGNSFGIGGSGYQRINLACPR--SMLEEALIRI  386 (391)
T ss_dssp             HHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCH--HHHHHHHHHH
Confidence            9999999977 9999997653  34689999998543  5677777665

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=8.8e-42  Score=338.79  Aligned_cols=325  Identities=20%  Similarity=0.243  Sum_probs=263.4

Q ss_pred             CCeeEcCCCCCCCC--CCHHHHHHHhcC-CC----CCCCCC-cchHHHHHHHHHHh----C---CCCCcEEEeCCHHHHH
Q 014492           95 EDIVKIDANENPYG--PPPEVREALGQL-KF----PYIYPD-PESRRLRAALAKDS----G---LESDHILVGCGADELI  159 (423)
Q Consensus        95 ~~~i~l~~~~~~~~--~~~~v~~al~~~-~~----~~~Y~~-~g~~~lr~~ia~~~----g---~~~~~i~~t~G~~~al  159 (423)
                      +++|+|+.+.++..  +++++.+++.+. ..    ...|++ .+..++|+++++++    |   +++++|++|+|+++++
T Consensus        43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al  122 (425)
T 1vp4_A           43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQAL  122 (425)
T ss_dssp             TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHH
T ss_pred             CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHH
Confidence            46899998876543  567888887652 21    256755 47899999999999    8   6678999999999999


Q ss_pred             HHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-------CCceEEE-EcCCCCCc
Q 014492          160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIF-LTSPNNPD  231 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~~i~-l~~p~NPt  231 (423)
                      ..++++++++||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++.+++       .++++|+ +++|+|||
T Consensus       123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~npt  201 (425)
T 1vp4_A          123 DLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPA  201 (425)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTT
T ss_pred             HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC-CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCC
Confidence            9999999999999999999999999999999999999997554 5999999999874       3789985 68999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~  304 (423)
                      |.+++.+++++|++.    |+++|+||+|.++.+++.   ....++..+++++++|+||.+| +|+|+||+++++++++.
T Consensus       202 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~  280 (425)
T 1vp4_A          202 GVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRK  280 (425)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCHHHHHH
T ss_pred             CCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCHHHHHH
Confidence            999998887776653    999999999999876432   2333344578999999999999 99999999999999988


Q ss_pred             HHHhcCC--CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccC-C---CCee-cCCCceEEEEEeCCCC
Q 014492          305 LWRAKQP--YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDV-P---FLNP-YPSYSNFILCEVTSGM  374 (423)
Q Consensus       305 l~~~~~~--~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~-~---~~~~-~p~~~~~~~~~~~~~~  374 (423)
                      +......  ++.++++|.++..+|++   .+++++.+++++++++++.+.|++. +   ++.+ .|++++|+|++++++.
T Consensus       281 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~  360 (425)
T 1vp4_A          281 IVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF  360 (425)
T ss_dssp             HHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC
T ss_pred             HHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC
Confidence            8765543  56799999999999976   3678889999999999999999874 3   3554 4778999999998666


Q ss_pred             CHHHHHHHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          375 DAKKLKDDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       375 ~~~~l~~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +..++.+.|.++||.++++..+    ..++++||+++.. +.+++.+++++|
T Consensus       361 ~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l  411 (425)
T 1vp4_A          361 DTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRL  411 (425)
T ss_dssp             CTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHH
Confidence            7788999999889999987653    2468999999864 224444444443

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=2.1e-41  Score=336.68  Aligned_cols=319  Identities=18%  Similarity=0.260  Sum_probs=258.4

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C------CCCCCC-CcchHHHHHHHHHHh----CCCCCcEEEeCCHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K------FPYIYP-DPESRRLRAALAKDS----GLESDHILVGCGADELIDL  161 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~------~~~~Y~-~~g~~~lr~~ia~~~----g~~~~~i~~t~G~~~al~~  161 (423)
                      +.++|+|+.|+++++++|.+.+++.+. .      ..++|+ ..+..+||+++++++    ++++++|++|+|+++++..
T Consensus        55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~  134 (432)
T 3ei9_A           55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISR  134 (432)
T ss_dssp             TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred             CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHH
Confidence            467899999999999999999888752 1      124674 457899999999996    7888999999999999997


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCC------------eEEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      + ..++++||.|+++.|+|+.+...++..|.            +++.+|.+.  ++..|+++      ..++++|++++|
T Consensus       135 l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~v~l~~p  207 (432)
T 3ei9_A          135 L-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------VGRTDIIFFCSP  207 (432)
T ss_dssp             H-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------CCCCSEEEEESS
T ss_pred             H-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------CCCCCEEEEeCC
Confidence            5 66889999999999999999998888774            677777643  34445332      257899999999


Q ss_pred             CCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhhhcccCccccccccCHH
Q 014492          228 NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      |||||.+++.+++++|++.    |++||+||+|.+|.+++..  .... ...+++++++||||.||++|+|+||++++++
T Consensus       208 ~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~  287 (432)
T 3ei9_A          208 NNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK  287 (432)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence            9999999999999988654    9999999999998765432  2112 2246789999999999999999999999888


Q ss_pred             H--------HHHHHHhc--CCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEE
Q 014492          301 I--------IEYLWRAK--QPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILC  368 (423)
Q Consensus       301 ~--------~~~l~~~~--~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~  368 (423)
                      +        ++.+.+..  ..++.+.++|.++.+++.+  .+|+++++++++++++++.+.|+++++....+.+++|+|+
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  367 (432)
T 3ei9_A          288 LLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWV  367 (432)
T ss_dssp             CBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEE
T ss_pred             HhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEE
Confidence            7        66665543  3456899999999999875  3678899999999999999999988643344578999999


Q ss_pred             EeCCCCCHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          369 EVTSGMDAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       369 ~~~~~~~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +++ +.+..++++.|+ ++||.++++..+  .+++++||++...+  +++.+++++|
T Consensus       368 ~~~-~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~--e~l~~~l~rl  421 (432)
T 3ei9_A          368 HFP-NQSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHR--ENILEACRRF  421 (432)
T ss_dssp             ECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             ECC-CCCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            998 677888888887 569999998763  34789999987643  6788888876

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.7e-41  Score=333.73  Aligned_cols=323  Identities=23%  Similarity=0.354  Sum_probs=264.0

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCCc-chHHHHHHHHHHh----C--CCCC-cEEEeCCHHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KF-PYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRC  165 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~~-g~~~lr~~ia~~~----g--~~~~-~i~~t~G~~~al~~~~~~  165 (423)
                      ++|+|+.+++++++++.+.+++.+. .. ...|++. +..++|+++++++    |  ++++ +|++|+|+++++..++++
T Consensus        26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~  105 (411)
T 2o0r_A           26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLG  105 (411)
T ss_dssp             TCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHH
T ss_pred             CeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHH
Confidence            4799999999988899999988763 22 3568654 6789999999996    6  4677 999999999999999999


Q ss_pred             hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC---CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      ++++||+|+++.|+|..+...++..|++++.+|.+.   ++.+|++++++.+. .++++|++++|+||||.+++.+++++
T Consensus       106 ~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~~~nptG~~~~~~~l~~  184 (411)
T 2o0r_A          106 LVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVT-PRTRALIINSPHNPTGAVLSATELAA  184 (411)
T ss_dssp             HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             hcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhc-cCceEEEEeCCCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999653   46699999999997 68999999999999999999877666


Q ss_pred             HHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CC
Q 014492          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PY  312 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~  312 (423)
                      |++.    |+++|+||+|.++.+.+.   ....+. ..++++++.|+||.+|++|+|+||+++++++++.+.....  .+
T Consensus       185 i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~  264 (411)
T 2o0r_A          185 IAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSY  264 (411)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccC
Confidence            6553    999999999998876432   122222 2567999999999999999999999999999988876543  46


Q ss_pred             CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC--CCCHHHHHHHHH-hCC
Q 014492          313 NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--GMDAKKLKDDLA-KMG  387 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~--~~~~~~l~~~L~-~~g  387 (423)
                      +.+.+.+.++..+|+. .+++++.+++++++++++.+.|++++ +.+ .+.+++|+|+++++  +.+..++.+.|. ++|
T Consensus       265 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~g  343 (411)
T 2o0r_A          265 VGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIG-FAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVG  343 (411)
T ss_dssp             CCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHT-CEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHS
T ss_pred             CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCC
Confidence            7788888888888875 67889999999999999999998874 443 45567799999974  257888999887 789


Q ss_pred             cEEEeCCCC-C------------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNK-E------------LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~-~------------~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++++..+ .            .++++||+++..  .+++.+++++|
T Consensus       344 i~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~--~e~i~~~~~~l  389 (411)
T 2o0r_A          344 VAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKR--DDTLDEAIRRL  389 (411)
T ss_dssp             EECEEGGGGSCCC--------CCGGGCEEEECCSC--HHHHHHHHHHH
T ss_pred             EEEcChhhhCCCccccccccccCCCCeEEEEecCC--HHHHHHHHHHH
Confidence            999987542 1            357999999853  24566666554

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=4e-41  Score=331.87  Aligned_cols=325  Identities=22%  Similarity=0.333  Sum_probs=261.9

Q ss_pred             CCCCeeEcCCCCCCCC--CCHHHHHHHhcC-C----CCCCCCCc-chHHHHHHHHHHh----C--CCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDANENPYG--PPPEVREALGQL-K----FPYIYPDP-ESRRLRAALAKDS----G--LESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~~-~----~~~~Y~~~-g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~a  158 (423)
                      ++.++|+|+.+.++..  +++++.+++.+. .    ... |++. +..++|+++++++    |  +++++|++|+|++++
T Consensus        32 ~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a  110 (407)
T 2zc0_A           32 KGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGA  110 (407)
T ss_dssp             SSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHH
T ss_pred             CCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHH
Confidence            3457899998876543  567788877652 1    124 7554 7899999999998    8  567899999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh----c-CCceEEE-EcCCCCCcC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----R-EKPKCIF-LTSPNNPDG  232 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~-~~~~~i~-l~~p~NPtG  232 (423)
                      +..++++++++||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++.++    + .++++|+ +++|+||||
T Consensus       111 ~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG  189 (407)
T 2zc0_A          111 LDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMG  189 (407)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTC
T ss_pred             HHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC-CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCC
Confidence            99999999999999999999999999999999999999997554 599999999986    4 3788875 679999999


Q ss_pred             cCCCHHHHHHHHc---C-CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH
Q 014492          233 SIINDEDLLKILE---M-PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL  305 (423)
Q Consensus       233 ~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l  305 (423)
                      .+++.+++++|++   . |+++|+||+|..+.+.+.   ....++..+++++++|+||.++ +|+|+||+++++++++.+
T Consensus       190 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~  268 (407)
T 2zc0_A          190 VTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKV  268 (407)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceEEEecCHHHHHHH
Confidence            9999996666554   4 999999999998875432   1233334468999999999999 999999999999999988


Q ss_pred             HHhcCC--CCCcHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHHHHHHcc-CCCCee-cCCCceEEEEEeCCCCCHH
Q 014492          306 WRAKQP--YNVSVAAEVAACAALQNP----IYLEKVKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTSGMDAK  377 (423)
Q Consensus       306 ~~~~~~--~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~~~~~~~~~~~~~~  377 (423)
                      ......  ++.+++.+.++..+++..    +++++.+++++++++++.+.|++ .+.+.+ .|.+++|+|++++++.+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (407)
T 2zc0_A          269 LMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGADGI  348 (407)
T ss_dssp             HHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTCCHH
T ss_pred             HHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCCCHH
Confidence            876655  457889999999999874    56778888999999999999987 454543 5678899999998777899


Q ss_pred             HHHHHHHhC-CcEEEeCCCC----CCCCeEEEEecC--hhhHHHHHHHHh
Q 014492          378 KLKDDLAKM-GVMIRHYNNK----ELKGYVRVSVGK--PEHTDALMECLM  420 (423)
Q Consensus       378 ~l~~~L~~~-gI~v~~~~~~----~~~~~iRis~~~--~~~~~~l~~al~  420 (423)
                      ++.+.|.++ ||.++++..+    ..++++||+++.  .++++++.++|+
T Consensus       349 ~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~  398 (407)
T 2zc0_A          349 SFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLA  398 (407)
T ss_dssp             HHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHHH
T ss_pred             HHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence            999999876 9999987653    246899999985  344555554444

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=5.9e-41  Score=330.42  Aligned_cols=325  Identities=15%  Similarity=0.230  Sum_probs=264.8

Q ss_pred             CCeeEcCCCC-CCCCCCHHHHHHHhcC-CC--CCCC-CCcchHHHHHHHHHH----hCCC--C-CcEEEeCCHHHHHHHH
Q 014492           95 EDIVKIDANE-NPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKD----SGLE--S-DHILVGCGADELIDLI  162 (423)
Q Consensus        95 ~~~i~l~~~~-~~~~~~~~v~~al~~~-~~--~~~Y-~~~g~~~lr~~ia~~----~g~~--~-~~i~~t~G~~~al~~~  162 (423)
                      .++|+|+.|. ++++++|++++++.+. ..  ...| +..+..+++++++++    +|++  + ++|++|+|+++++..+
T Consensus        39 ~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~  118 (407)
T 3nra_A           39 GRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLA  118 (407)
T ss_dssp             SCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred             CceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence            3589999864 4588899999988763 21  1346 345667777776655    5653  4 7999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC------CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR------KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~------~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      +.+++++||+|+++.|+|..+...++..|++++.+|.      ++++.+|++++++.+. .++++|++++|+||||.+++
T Consensus       119 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~  197 (407)
T 3nra_A          119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFK-AGARVFLFSNPNNPAGVVYS  197 (407)
T ss_dssp             HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHH-TTCCEEEEESSCTTTCCCCC
T ss_pred             HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHh-hCCcEEEEcCCCCCCCcccC
Confidence            9999999999999999999999999999999999997      4678899999999997 58999999999999999999


Q ss_pred             HHHHHHHHc---C-CCEEEEccCCccccCCCch---hhhh--ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH
Q 014492          237 DEDLLKILE---M-PILVVLDEAYTEFSGLESR---MEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR  307 (423)
Q Consensus       237 ~~~l~~i~~---~-~~~li~Deay~~~~~~~~~---~~~~--~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~  307 (423)
                      .+++++|++   . |+++|+||+|..+.+++..   ...+  ...+++++++|+||.+|++|+|+||+++++++++.+..
T Consensus       198 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~  277 (407)
T 3nra_A          198 AEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK  277 (407)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH
Confidence            776666655   3 9999999999988765422   2222  23678999999999999999999999999999998876


Q ss_pred             hcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHH
Q 014492          308 AKQP--YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDD  382 (423)
Q Consensus       308 ~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~  382 (423)
                      ....  ++.+++++.++..+|+. .+++++.+++++++++++.+.|++++++.+ .+.+++|+|++++. +.+..++.+.
T Consensus       278 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (407)
T 3nra_A          278 LQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKI  357 (407)
T ss_dssp             HHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHH
T ss_pred             HHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHH
Confidence            6543  56778888888888875 578889999999999999999999866664 56677999999986 6788999999


Q ss_pred             HH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          383 LA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       383 L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |. ++||.++++..+  ...+++||+++..  .+++.+++++|
T Consensus       358 l~~~~gi~v~~g~~~~~~~~~~iRis~~~~--~~~i~~~~~~l  398 (407)
T 3nra_A          358 LRLQAGVVVTPGTEFSPHTADSVRLNFSQD--HEAAVAAARRI  398 (407)
T ss_dssp             HHHHHCEECEEGGGTCTTCTTBEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHhCCEEEeCchhhCCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence            97 579999987653  3578999999863  35666666654

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=2.5e-40  Score=327.41  Aligned_cols=318  Identities=17%  Similarity=0.191  Sum_probs=255.7

Q ss_pred             CCeeEcCCCCC-----CCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHh-CC-CCC---cEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANEN-----PYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDS-GL-ESD---HILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~-----~~~~~~~v~~al~~~~~--~~~Y~-~~g~~~lr~~ia~~~-g~-~~~---~i~~t~G~~~al~~  161 (423)
                      .++|+|+.|++     ++++++.+.+++.+...  ...|+ ..|..++|+++++++ +. .++   +|++|+|+++++..
T Consensus        38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~  117 (418)
T 3rq1_A           38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHH  117 (418)
T ss_dssp             GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHH
T ss_pred             CCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHH
Confidence            46899999965     88889999999887432  24674 458899999999987 22 356   99999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcC---Cce-EEEEcCC-CCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVERE---KPK-CIFLTSP-NNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~---~~~-~i~l~~p-~NPtG~~~  235 (423)
                      ++++++++||+|+++.|+|..|...++..|++++.+|. ++++.+|++++++.+.+.   +++ ++++++| |||||.++
T Consensus       118 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~  197 (418)
T 3rq1_A          118 LIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI  197 (418)
T ss_dssp             HHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC
T ss_pred             HHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999999999999996 355799999999999741   566 7888899 99999999


Q ss_pred             CHHHHHHHHc---------C-CCEEEEccCCccccCCCchh-hhhc----cCCc--EEEEccChhhhcccCcccccccc-
Q 014492          236 NDEDLLKILE---------M-PILVVLDEAYTEFSGLESRM-EWVK----KHDN--LIVLRTFSKRAGLAGLRVGYGAF-  297 (423)
Q Consensus       236 ~~~~l~~i~~---------~-~~~li~Deay~~~~~~~~~~-~~~~----~~~~--~i~i~S~SK~~g~~G~R~G~i~~-  297 (423)
                      +.+++++|++         . |++||+||+|.+|.+.+... ....    ..++  +++++||||.||++|+|+||+++ 
T Consensus       198 ~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~  277 (418)
T 3rq1_A          198 EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGI  277 (418)
T ss_dssp             CHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEE
T ss_pred             CHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEE
Confidence            9999998876         5 89999999999988654321 1111    1344  58899999999999999999999 


Q ss_pred             --CHHHHHHHHHhcC------CCCCcHHHHHHHHHHhCChH----HH---HHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492          298 --PLSIIEYLWRAKQ------PYNVSVAAEVAACAALQNPI----YL---EKVKEALIKERERLFKLLKDVPFLNPYPSY  362 (423)
Q Consensus       298 --~~~~~~~l~~~~~------~~~~~~~~~~a~~~~l~~~~----~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~  362 (423)
                        ++++++.+.....      ..+++.+++.++..+|++.+    |.   ++++++++++++++.+.|+++++....+.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~  357 (418)
T 3rq1_A          278 SDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRG  357 (418)
T ss_dssp             ESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCS
T ss_pred             eCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence              8999988876532      24688999999999998853    32   356678899999999999887543345677


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      ++|+|++++   +..++++.|.++||.++++.     +++||+++..+ .+++.+++++
T Consensus       358 ~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~-----~~iRis~~~~~-~~~i~~~~~~  407 (418)
T 3rq1_A          358 GFFITIPTD---SANAICEELKKEHIYVIALA-----NGIRIAACGIP-KCQMTGLAEK  407 (418)
T ss_dssp             SSEEEEECT---THHHHHHHHHHTTEECEECS-----SEEEEEGGGSC-HHHHTTHHHH
T ss_pred             eEEEEcCCC---CHHHHHHHHHhCCEEEecCC-----CCeEEEEecCC-HHHHHHHHHH
Confidence            888998874   68899998989999999974     78999987311 2344444443

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=5.7e-40  Score=325.37  Aligned_cols=326  Identities=19%  Similarity=0.309  Sum_probs=266.4

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C-CCCCCCCcchHHHHHHHHHH----hC--CCCCcEEEeCCHHHHHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPDPESRRLRAALAKD----SG--LESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y~~~g~~~lr~~ia~~----~g--~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      +.++|+|+.++++++++|++.+++.+. . ..+.|+... .+++++++++    ++  +++++|++|+|++++++.+++.
T Consensus        60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~-~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~  138 (421)
T 3l8a_A           60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFN-DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQA  138 (421)
T ss_dssp             CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCC-HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred             CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCC-HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence            578999999999999999999999763 2 235665432 5555555555    56  6788999999999999999999


Q ss_pred             hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      ++++||+|+++.|+|..+...++..|.+++.+|.+   .++.+|+++|++++.++++++|++++|+||||.+++.+++++
T Consensus       139 ~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~  218 (421)
T 3l8a_A          139 FSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIK  218 (421)
T ss_dssp             HSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred             hcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHH
Confidence            99999999999999999999999999999999963   345689999999997578999999999999999999988888


Q ss_pred             HHcC----CCEEEEccCCccccCCCc---hhhhhc--cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhc---
Q 014492          243 ILEM----PILVVLDEAYTEFSGLES---RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK---  309 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~---~~~~~~--~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~---  309 (423)
                      |++.    |+++|+||+|.++.+.+.   ....+.  ..++++++.|+||.+|++|+|+||++++ +++++.+....   
T Consensus       219 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~  298 (421)
T 3l8a_A          219 IAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN  298 (421)
T ss_dssp             HHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhc
Confidence            7664    999999999999876442   222222  2478899999999999999999999998 88888877654   


Q ss_pred             CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH-h
Q 014492          310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-K  385 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~-~  385 (423)
                      ..++.+++++.++.++++. .+|+++.+++++++++++.+.|++++.+.+ .+.+++++|++++. +.+..++.+.|. +
T Consensus       299 ~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~  378 (421)
T 3l8a_A          299 NQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNE  378 (421)
T ss_dssp             TCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHT
T ss_pred             ccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHh
Confidence            3357899999999888874 678899999999999999999988755664 45566777899975 567889999997 5


Q ss_pred             CCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +||.+.++..+  ..++++||+++.++  +++.+++++|
T Consensus       379 ~gi~v~~g~~f~~~~~~~iRi~~~~~~--~~i~~~l~~l  415 (421)
T 3l8a_A          379 AKVVLNDGAHFGKEGKYFARLNVATPK--NTVQEALSRI  415 (421)
T ss_dssp             TCEECEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             CCEEEECchhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            79999987653  34689999998643  6677777765

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=3.6e-40  Score=328.15  Aligned_cols=327  Identities=18%  Similarity=0.253  Sum_probs=263.2

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcCCC--C------------CCCCC-cchHHHHHHHHHHhC--------CCCCcEE
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------------YIYPD-PESRRLRAALAKDSG--------LESDHIL  150 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~------------~~Y~~-~g~~~lr~~ia~~~g--------~~~~~i~  150 (423)
                      +..+|.|+.+++++. .+.+.+++.+...  .            .+|++ .|.++||++++++++        +++++|+
T Consensus        37 p~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~  115 (435)
T 3piu_A           37 TNGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLV  115 (435)
T ss_dssp             TTSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEE
T ss_pred             CCCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEE
Confidence            345799999999887 6777788776321  0            35754 478999999999987        6789999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH-HCCCeEEEecCCC--CCCCCHHHHHHHhhc-----CCceEE
Q 014492          151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRKS--DFSLNVELIADAVER-----EKPKCI  222 (423)
Q Consensus       151 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~~l~~~i~~-----~~~~~i  222 (423)
                      +|+|+++++..++.+++++||.|+++.|+|..+...++ ..|++++.++.+.  ++.+|++++++.+.+     .++++|
T Consensus       116 ~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v  195 (435)
T 3piu_A          116 LTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGV  195 (435)
T ss_dssp             EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             EcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence            99999999999999999999999999999999888777 6899999999653  567999999999874     378999


Q ss_pred             EEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc----hhhhhcc---------CCcEEEEccChhhh
Q 014492          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWVKK---------HDNLIVLRTFSKRA  285 (423)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~----~~~~~~~---------~~~~i~i~S~SK~~  285 (423)
                      ++++|+||||.+++.+++++|++.    |+++|+||+|..+.+.+.    .......         .+++++++|+||.|
T Consensus       196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~  275 (435)
T 3piu_A          196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL  275 (435)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred             EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence            999999999999999888887664    999999999998665432    1122222         67889999999999


Q ss_pred             cccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCChH----HHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492          286 GLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI----YLEKVKEALIKERERLFKLLKDVPFLNPYP  360 (423)
Q Consensus       286 g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p  360 (423)
                      |++|+|+||+++ ++++.+.+.+....+..+++.+.++.+++++.+    ++++.+++++++++++.+.|+++++....+
T Consensus       276 g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~  355 (435)
T 3piu_A          276 GLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNG  355 (435)
T ss_dssp             CCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCC
T ss_pred             CCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            999999999999 567888887777778889999999999998865    456778889999999999999885333345


Q ss_pred             CCceEEEEEeCCCC------CHHHHHHHHHhC-CcEEEeCCC--CCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          361 SYSNFILCEVTSGM------DAKKLKDDLAKM-GVMIRHYNN--KELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       361 ~~~~~~~~~~~~~~------~~~~l~~~L~~~-gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+++|+|++++...      +..++.+.|.++ ||.+.++..  ...++++||+++.. +.+++.+++++|
T Consensus       356 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l  425 (435)
T 3piu_A          356 NAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRL  425 (435)
T ss_dssp             CSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHH
T ss_pred             CeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHH
Confidence            56699999997433      456788888755 999998765  34578999999763 235566666554

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.7e-40  Score=328.23  Aligned_cols=323  Identities=15%  Similarity=0.162  Sum_probs=258.8

Q ss_pred             CeeEcCCCCCCCCC---CHHHHHHH--hcC-C----CCCCCCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHH--HHH
Q 014492           96 DIVKIDANENPYGP---PPEVREAL--GQL-K----FPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELI--DLI  162 (423)
Q Consensus        96 ~~i~l~~~~~~~~~---~~~v~~al--~~~-~----~~~~Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al--~~~  162 (423)
                      ..|+|..|.++...   ++.+.+++  .+. .    ....|++ .|..+||+++++++++++++|++|+|+++++  +++
T Consensus        34 ~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~  113 (427)
T 3ppl_A           34 LKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVI  113 (427)
T ss_dssp             CCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHH
T ss_pred             ceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHH
Confidence            46999998876532   23465665  432 1    1367866 4889999999999999999999999999999  588


Q ss_pred             HHHhcC--C----------CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCC
Q 014492          163 MRCVLD--P----------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNN  229 (423)
Q Consensus       163 ~~~l~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~N  229 (423)
                      ++++++  |          ||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++++...++++|+++ +|||
T Consensus       114 ~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~v~~~p~~~N  192 (427)
T 3ppl_A          114 SWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED-GPDMDAVEELVKNPQVKGMWVVPVFSN  192 (427)
T ss_dssp             HHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT-EECHHHHHHHTTSTTEEEEEECCSSCT
T ss_pred             HHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC-CCCHHHHHHHHhcCCCeEEEECCCCCC
Confidence            888877  6          899999999999999999999999999997654 5999999999965689999876 8899


Q ss_pred             CcCcCCCHHHHHHHHc----C-CCEEEEccCCccccCCCc---h--hhhh----ccCCcEEEEccChhhhcccCcccccc
Q 014492          230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLES---R--MEWV----KKHDNLIVLRTFSKRAGLAGLRVGYG  295 (423)
Q Consensus       230 PtG~~~~~~~l~~i~~----~-~~~li~Deay~~~~~~~~---~--~~~~----~~~~~~i~i~S~SK~~g~~G~R~G~i  295 (423)
                      |||.+++.+++++|++    . |++||+||+|.++.+.+.   .  ...+    +..+++++++||||. +++|+|+||+
T Consensus       193 PtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~G~r~G~~  271 (427)
T 3ppl_A          193 PTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI-TLAGAGVSFF  271 (427)
T ss_dssp             TTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-SCTTSSCEEE
T ss_pred             CCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-cCcCccEEEE
Confidence            9999999996666654    3 999999999998654332   1  1111    256889999999998 7799999999


Q ss_pred             ccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-h---HHHHHHHHHHHHHHHHHHHHHcc----CCCCe-ecCCCce
Q 014492          296 AFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-P---IYLEKVKEALIKERERLFKLLKD----VPFLN-PYPSYSN  364 (423)
Q Consensus       296 ~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-~---~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~p~~~~  364 (423)
                      ++++++++.+.....  .++.+.+.|.++..++++ .   +++++.++.++++++.+.+.|.+    ++.+. ..|++++
T Consensus       272 ~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~  351 (427)
T 3ppl_A          272 LTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGY  351 (427)
T ss_dssp             ECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSS
T ss_pred             EcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccE
Confidence            999999998887654  477899999999999998 3   56778888888888888888754    33344 3678899


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~-----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |+|++++++ +..++.+.|.++||.+++++. +     ..++++||+++.. +.+++.+++++|
T Consensus       352 ~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l  413 (427)
T 3ppl_A          352 FISLDVVPG-TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGV  413 (427)
T ss_dssp             CEEEECSTT-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred             EEEEECCcc-hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHH
Confidence            999999855 788899999999999999443 2     2578999999864 236677666654

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=1.3e-39  Score=317.44  Aligned_cols=306  Identities=22%  Similarity=0.303  Sum_probs=252.9

Q ss_pred             HHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH
Q 014492          111 PEVREALGQLKFPYIY-PDPESRRLRAALAKDS-GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA  188 (423)
Q Consensus       111 ~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~-g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~  188 (423)
                      +++.+++....  ..| +..+..++|+++++++ ++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++
T Consensus        46 ~~~~~~~~~~~--~~y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~  123 (375)
T 3op7_A           46 EDFYKKLQGTK--LNYGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPK  123 (375)
T ss_dssp             HHHHHHHHTSC--CSSCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHH
T ss_pred             HHHHHHHhcCC--cCCCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH
Confidence            34555554422  345 5567899999999998 5788999999999999999999999999999999999999999999


Q ss_pred             HCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH---HHHcC-CCEEEEccCCccccCC
Q 014492          189 VNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL---KILEM-PILVVLDEAYTEFSGL  262 (423)
Q Consensus       189 ~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~---~i~~~-~~~li~Deay~~~~~~  262 (423)
                      ..|++++.+|.+  .++.+|+++++++++ +++++|++++|+||||.+++.++++   ++|+. |+++|+||+|.++...
T Consensus       124 ~~g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~  202 (375)
T 3op7_A          124 SLGAEVDLWQIEEENGWLPDLEKLRQLIR-PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL  202 (375)
T ss_dssp             HTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred             HcCCEEEEEeccccCCCCCCHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence            999999999964  456689999999997 6899999999999999999955555   45555 9999999999988765


Q ss_pred             CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC-hHHHHHHHHHH
Q 014492          263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-PIYLEKVKEAL  339 (423)
Q Consensus       263 ~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~-~~~~~~~~~~~  339 (423)
                      + .....+..+++++++||||.+|++|+|+||+++++++++.+......  ++.+.+.+.++..+++. .+++++.++++
T Consensus       203 ~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  281 (375)
T 3op7_A          203 D-VPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHIL  281 (375)
T ss_dssp             C-CCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             C-CCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHH
Confidence            2 22223346788999999999999999999999999999998776553  56788999988888887 45778889999


Q ss_pred             HHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHH
Q 014492          340 IKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALME  417 (423)
Q Consensus       340 ~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~  417 (423)
                      +++++.+.+.|++.+++.. .|.+++++|+.++.+.+..++++.|. ++||.++++..+..++++||+++..+  +++.+
T Consensus       282 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~i~~  359 (375)
T 3op7_A          282 EENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQ--ETLIK  359 (375)
T ss_dssp             HHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCSCH--HHHHH
T ss_pred             HHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecCCH--HHHHH
Confidence            9999999999998766654 46778889999887778899998885 89999999877666899999998754  55666


Q ss_pred             HHhhh
Q 014492          418 CLMHL  422 (423)
Q Consensus       418 al~~l  422 (423)
                      ++++|
T Consensus       360 ~l~~l  364 (375)
T 3op7_A          360 GLEKL  364 (375)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66554

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=3.7e-40  Score=324.46  Aligned_cols=317  Identities=22%  Similarity=0.312  Sum_probs=249.5

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC----C---CCCCC-CCcchHHHHHHHHHH--hC-CCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL----K---FPYIY-PDPESRRLRAALAKD--SG-LESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~----~---~~~~Y-~~~g~~~lr~~ia~~--~g-~~~~~i~~t~G~~~al~~~  162 (423)
                      +.++|+|+.|+++++++|.+.+++.+.    .   ...+| +..+..++|++++++  +| +++++|++|+|+++++..+
T Consensus        32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~  111 (400)
T 3asa_A           32 QHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRL  111 (400)
T ss_dssp             TSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHH
T ss_pred             CCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHH
Confidence            567899999999998999988888652    1   12568 456789999999999  58 7889999999999999997


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCe-EEEecCCC--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      +. ++++||+|+++.|+|..+...++..|.+ ++.+|.++  ++..|+++    +  .++++|++++||||||.+++.++
T Consensus       112 ~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~--~~~~~v~l~~p~nptG~~~~~~~  184 (400)
T 3asa_A          112 LS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D--THIDILCLCSPNNPTGTVLNKDQ  184 (400)
T ss_dssp             HH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T--CCCSEEEEESSCTTTCCCCCHHH
T ss_pred             HH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c--cCccEEEEeCCCCCCCCcCCHHH
Confidence            65 5689999999999999999999999999 99998653  23344321    1  57899999999999999999988


Q ss_pred             HHHHHcC----CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHH-------HHH
Q 014492          240 LLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-------IEY  304 (423)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-------~~~  304 (423)
                      +++|++.    |+++|+||+|.++.+++.   ....++ ..+++++++|+||.||++|+|+||+++++++       ++.
T Consensus       185 l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~  264 (400)
T 3asa_A          185 LRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQ  264 (400)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHH
T ss_pred             HHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHH
Confidence            8777653    999999999998875432   222222 1457899999999999999999999999887       565


Q ss_pred             HHHhc--CC-CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEE-eCCCCCHHHH
Q 014492          305 LWRAK--QP-YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCE-VTSGMDAKKL  379 (423)
Q Consensus       305 l~~~~--~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~-~~~~~~~~~l  379 (423)
                      +....  .. ++.+.++|.++..+|++. ++++.+++++++++++.+.|++++ +.+ .+.+++|+|++ ++++.+..++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (400)
T 3asa_A          265 DWERFLSTTFNGASIPAQEAGVAGLSIL-PQLEAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPTQANISDRDL  342 (400)
T ss_dssp             HHHHHHHHHCCCCCHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHTT-CEEEECSSSSEEEEECCCTTCCTTTH
T ss_pred             HHHHHhccCccCCChHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCceEEEEeccCCCCCHHHH
Confidence            54321  22 368999999999888765 678889999999999999998875 444 45678999999 8766677788


Q ss_pred             HHHHH-hCCcEEEeCCCC--CCCCeEEEEe-cChhhHHHHHHHHhhh
Q 014492          380 KDDLA-KMGVMIRHYNNK--ELKGYVRVSV-GKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~-~~gI~v~~~~~~--~~~~~iRis~-~~~~~~~~l~~al~~l  422 (423)
                      .+.|. ++||.+.++..+  ..++++||++ .+.+   ++.+++++|
T Consensus       343 ~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e---~i~~~l~~l  386 (400)
T 3asa_A          343 FDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKRE---DILAACERL  386 (400)
T ss_dssp             HHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHH---HHHHHHHHH
T ss_pred             HHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHH---HHHHHHHHH
Confidence            88887 569999987653  2468999995 3444   455555543

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=2.1e-39  Score=321.23  Aligned_cols=316  Identities=18%  Similarity=0.187  Sum_probs=250.0

Q ss_pred             CCCeeEcCCC---CCCCCCC--HHHHHHHhcC-C--CCCCCC-CcchHHHHHHHHHHhCC------CCC--cEEEeCCHH
Q 014492           94 PEDIVKIDAN---ENPYGPP--PEVREALGQL-K--FPYIYP-DPESRRLRAALAKDSGL------ESD--HILVGCGAD  156 (423)
Q Consensus        94 ~~~~i~l~~~---~~~~~~~--~~v~~al~~~-~--~~~~Y~-~~g~~~lr~~ia~~~g~------~~~--~i~~t~G~~  156 (423)
                      ..++|+|+.|   +++..++  +.+.+++.+. .  ..+.|+ ..|..++|+++++++..      +++  +|++|+|++
T Consensus        48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t  127 (420)
T 4f4e_A           48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGT  127 (420)
T ss_dssp             CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred             CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccH
Confidence            3578999999   5555444  8999888762 2  235784 45889999999999732      567  899999999


Q ss_pred             HHHHHHH--HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCCC
Q 014492          157 ELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNP  230 (423)
Q Consensus       157 ~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NP  230 (423)
                      +++..++  ..++++||+|+++.|+|..+...++..|++++.+|.  ++++.+|++++++.+++  .+++++++++||||
T Consensus       128 ~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NP  207 (420)
T 4f4e_A          128 GALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNP  207 (420)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred             HHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            9999994  456899999999999999999999999999999997  45788999999999964  46789999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC----chh-hhhccCCcEEEEccChhhhcccCcccccccc---C
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE----SRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF---P  298 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~----~~~-~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~  298 (423)
                      ||.+++.+++++|++.    |+++|+||+|.++.++.    ... ......+++++++||||.||++|+|+||+++   +
T Consensus       208 tG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~  287 (420)
T 4f4e_A          208 TGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDS  287 (420)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred             CCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCC
Confidence            9999999988888764    99999999999998753    112 2223578999999999999999999999863   5


Q ss_pred             HHHHHHH----HHhc--CCCCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccC---CCCe-ecCC
Q 014492          299 LSIIEYL----WRAK--QPYNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDV---PFLN-PYPS  361 (423)
Q Consensus       299 ~~~~~~l----~~~~--~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~---~~~~-~~p~  361 (423)
                      +++++.+    ....  ...+.+.+++.++..++.+.       +++++++++++++++.+.+.|+++   +++. ..|.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  367 (420)
T 4f4e_A          288 KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQ  367 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHS
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCC
Confidence            6655443    2221  23456788888888888873       457888999999999999999987   2333 4577


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                      +++|+|+.+    +.+.+.+.|.++||.+.++.        ||+++  +.++++++.++|++
T Consensus       368 ~g~~~~~~~----~~~~~~~~l~~~gI~v~~~~--------Ris~~~~~~~~i~~~~~~l~~  417 (420)
T 4f4e_A          368 RGMFSYSGL----TSAQVDRLREEFGIYAVSTG--------RICVAALNTRNLDVVANAIAA  417 (420)
T ss_dssp             CSSEEECCC----CHHHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred             ccEEEEeCC----CHHHHHHHHHhCCEEecCCC--------eEEEecCCHHHHHHHHHHHHH
Confidence            899999876    35666677778999999864        99998  45556666666654

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=4.9e-39  Score=315.77  Aligned_cols=327  Identities=15%  Similarity=0.135  Sum_probs=253.1

Q ss_pred             hHHHHHHhCC-CCCCeeEcCCC---CCCCCCC--HHHHHHHhc-C-C--CCCCCCC-cchHHHHHHHHHHhCC------C
Q 014492           83 FEVLSIQLGR-KPEDIVKIDAN---ENPYGPP--PEVREALGQ-L-K--FPYIYPD-PESRRLRAALAKDSGL------E  145 (423)
Q Consensus        83 ~~~~~~~~~~-~~~~~i~l~~~---~~~~~~~--~~v~~al~~-~-~--~~~~Y~~-~g~~~lr~~ia~~~g~------~  145 (423)
                      +..+...+.. ...++|+|+.|   +++..++  +.+.+++.+ . .  ..+.|+. .|..++|++++++++.      +
T Consensus        13 ~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~   92 (397)
T 3fsl_A           13 ILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK   92 (397)
T ss_dssp             HHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             hhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc
Confidence            3334443332 34578999999   4554444  899988876 3 2  2356855 5889999999999842      6


Q ss_pred             CC--cEEEeCCHHHHHHHHH--HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--C
Q 014492          146 SD--HILVGCGADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--E  217 (423)
Q Consensus       146 ~~--~i~~t~G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~  217 (423)
                      ++  +|++|+|+++++..++  ..++++||+|+++.|+|..+...++..|++++.+|.  ++++.+|++++++.+.+  .
T Consensus        93 ~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  172 (397)
T 3fsl_A           93 QQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQA  172 (397)
T ss_dssp             TTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCT
T ss_pred             ccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCC
Confidence            77  8999999999999995  456799999999999999999999999999999997  45788999999999974  4


Q ss_pred             CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC--c--hh-hhhccCCcEEEEccChhhhccc
Q 014492          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RM-EWVKKHDNLIVLRTFSKRAGLA  288 (423)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~--~~-~~~~~~~~~i~i~S~SK~~g~~  288 (423)
                      +++++++++||||||.+++.+++++|++.    |+++|+||+|.++.++.  .  .. ......+++++++||||.+|++
T Consensus       173 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~  252 (397)
T 3fsl_A          173 GSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLY  252 (397)
T ss_dssp             TCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCG
T ss_pred             CCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCc
Confidence            67888889999999999999988877663    99999999999998752  1  12 2224578999999999999999


Q ss_pred             Ccccccccc---CHHHHHHHHHh-----cCC-CCCcHHHHHHHHHHhCC-------hHHHHHHHHHHHHHHHHHHHHHcc
Q 014492          289 GLRVGYGAF---PLSIIEYLWRA-----KQP-YNVSVAAEVAACAALQN-------PIYLEKVKEALIKERERLFKLLKD  352 (423)
Q Consensus       289 G~R~G~i~~---~~~~~~~l~~~-----~~~-~~~~~~~~~a~~~~l~~-------~~~~~~~~~~~~~~~~~l~~~L~~  352 (423)
                      |+|+||+++   +++.++.+...     ... .+++.+++.++..++.+       .+++++.+++++++++++.+.|++
T Consensus       253 G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  332 (397)
T 3fsl_A          253 GERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLST  332 (397)
T ss_dssp             GGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999974   45666544322     123 45678889988888887       356788899999999999999988


Q ss_pred             CC---CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC--hhhHHHHHHHHhh
Q 014492          353 VP---FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK--PEHTDALMECLMH  421 (423)
Q Consensus       353 ~~---~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~--~~~~~~l~~al~~  421 (423)
                      ++   ++. ..|.+++|+|++++    .+.+.+.|.++||.+++++        ||+++.  .++++++.++|++
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~l~~  395 (397)
T 3fsl_A          333 EMPERNFDYLLNQRGMFSYTGLS----AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKAFAA  395 (397)
T ss_dssp             HCTTSCCTHHHHCCSSEEECCCC----HHHHHHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHHHHH
T ss_pred             cCCCCCceeecCCceEEEecCCC----HHHHHHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHHHHh
Confidence            63   333 35678899998763    5666777779999999875        999874  4445555555544

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=1.7e-39  Score=321.96  Aligned_cols=323  Identities=15%  Similarity=0.155  Sum_probs=257.7

Q ss_pred             CeeEcCCCCCC---CCCCHHHHHHHh--cC-CC---CCCC-CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH--HH
Q 014492           96 DIVKIDANENP---YGPPPEVREALG--QL-KF---PYIY-PD-PESRRLRAALAKDSGLESDHILVGCGADELID--LI  162 (423)
Q Consensus        96 ~~i~l~~~~~~---~~~~~~v~~al~--~~-~~---~~~Y-~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~--~~  162 (423)
                      +.|+|+.|.++   ++.++.+.+++.  +. ..   ...| ++ .|.++||+++++++++++++|++|+|+++++.  ++
T Consensus        26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~  105 (423)
T 3ez1_A           26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVL  105 (423)
T ss_dssp             CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHH
T ss_pred             ceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHH
Confidence            35999999988   777778888885  32 21   2568 44 47899999999999999999999999999998  88


Q ss_pred             HHHhcC--C---------CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh-cCCceEEEEc-CCCC
Q 014492          163 MRCVLD--P---------GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNN  229 (423)
Q Consensus       163 ~~~l~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~~i~l~-~p~N  229 (423)
                      +++++.  +         ||+|+++.|+|..+...++..|++++.+|.+++ ++|++++++++. ..++++|+++ +|||
T Consensus       106 ~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-g~d~~~l~~~l~~~~~~~~v~~~~~~~N  184 (423)
T 3ez1_A          106 TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD-GPDVDAVERLAGTDPSVKGILFVPTYSN  184 (423)
T ss_dssp             HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT-EECHHHHHHHHHSCTTEEEEEECSSSCT
T ss_pred             HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC-CCCHHHHHHHHhhCCCceEEEECCCCCC
Confidence            888888  8         599999999999999999999999999997654 699999999995 4689999865 8999


Q ss_pred             CcCcCCCHHHHHHHHc----C-CCEEEEccCCccccCCC-------chhhh---hccCCcEEEEccChhhhcccCccccc
Q 014492          230 PDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLE-------SRMEW---VKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       230 PtG~~~~~~~l~~i~~----~-~~~li~Deay~~~~~~~-------~~~~~---~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      |||.+++.+++++|++    . |++||+||+|..+.+..       +....   .+..+++++++||||. +++|+|+||
T Consensus       185 PtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~  263 (423)
T 3ez1_A          185 PGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGF  263 (423)
T ss_dssp             TTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEE
T ss_pred             CCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEE
Confidence            9999999997777654    3 99999999999643222       11111   1356899999999998 679999999


Q ss_pred             cccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC--h---HHHHHHHHHHHHHHHHHHHHHcc----CC-CCe-ecCC
Q 014492          295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN--P---IYLEKVKEALIKERERLFKLLKD----VP-FLN-PYPS  361 (423)
Q Consensus       295 i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~--~---~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~-~~p~  361 (423)
                      +++++++++.+.....  .++.+.+.|.++..++++  .   +++++.++.++++++.+.+.|.+    ++ .+. ..|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~  343 (423)
T 3ez1_A          264 VASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK  343 (423)
T ss_dssp             EEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCS
T ss_pred             EEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCC
Confidence            9999999998887653  467899999999988876  3   56677777888888777776654    44 334 3578


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEe-CCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRH-YNNK-----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~-~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +++|+|++++++ +.+.+.+.|.++||.+++ +..+     ..++++||+++.. +.+++.+++++|
T Consensus       344 ~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l  408 (423)
T 3ez1_A          344 GGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVV  408 (423)
T ss_dssp             BSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHH
T ss_pred             ccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence            899999999855 788899999999999999 4332     2468999999853 235566666554

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=3.1e-40  Score=324.11  Aligned_cols=306  Identities=22%  Similarity=0.258  Sum_probs=239.8

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC---C---CCCCCCCc-ch-----HHHHHHHHHHhC-----CCC-CcEEEeCC
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL---K---FPYIYPDP-ES-----RRLRAALAKDSG-----LES-DHILVGCG  154 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~---~---~~~~Y~~~-g~-----~~lr~~ia~~~g-----~~~-~~i~~t~G  154 (423)
                      .+.++|+|+.+++++++++.+.+++.+.   .   ...+|++. |.     ++||++++++++     +.+ ++|++|+|
T Consensus        20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G   99 (391)
T 3bwn_A           20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTG   99 (391)
T ss_dssp             TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEH
T ss_pred             CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Confidence            3467899999999987767777776431   1   22568654 66     999999999986     235 69999999


Q ss_pred             HHHHHHHHHHHhcCCCC----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          155 ADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       155 ~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      +++++.+++++++++||    +|++++|+|..|...++..|++++.++.+.+ +++         ..++|+|++++||||
T Consensus       100 ~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~l~---------~~~~k~v~l~~p~NP  169 (391)
T 3bwn_A          100 STQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-GFD---------KKGPYIELVTSPNNP  169 (391)
T ss_dssp             HHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-TCC---------CCSCEEEEEESSCTT
T ss_pred             hHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-HcC---------CCCCEEEEECCCCCC
Confidence            99999999999999999    9999999999999999999999998886432 222         257899999999999


Q ss_pred             cCcCCCHHHHHHHHcC--C--CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHH
Q 014492          231 DGSIINDEDLLKILEM--P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYL  305 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~--~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l  305 (423)
                      ||.+++  +   |++.  +  ++||+||+|.+  .......  ...+++++++||||.||++|+|+||+++ ++++++.+
T Consensus       170 tG~~~~--~---l~~~~~~~~~~ii~De~y~~--~~~~~l~--~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l  240 (391)
T 3bwn_A          170 DGTIRE--T---VVNRPDDDEAKVIHDFAYYW--PHYTPIT--RRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKM  240 (391)
T ss_dssp             TCCCCC--C---CC-----CCCEEEEECTTCS--TTTSCCC--CCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHH
T ss_pred             CchhHH--H---HHHHhhcCCCEEEEeCCCCC--CCCCccc--cCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHH
Confidence            999997  3   3433  4  99999999984  1111111  1457899999999999999999999997 89999988


Q ss_pred             HHhcC--CCCCcHHHHHHHHHHhCC-----------hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-------------
Q 014492          306 WRAKQ--PYNVSVAAEVAACAALQN-----------PIYLEKVKEALIKERERLFKLLKDVPFLNPY-------------  359 (423)
Q Consensus       306 ~~~~~--~~~~~~~~~~a~~~~l~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-------------  359 (423)
                      .....  .++++.++|.++..+|++           .+++++++++++++++++.+.|++++++.+.             
T Consensus       241 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~  320 (391)
T 3bwn_A          241 VEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKS  320 (391)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEE
T ss_pred             HHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccccc
Confidence            87765  478899999999999975           3578999999999999999999987544321             


Q ss_pred             -CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCC-CCeEEEEecChhhHHHHHHHHhhh
Q 014492          360 -PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       360 -p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~-~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                       |.+|+|+|+++++.   +.+.+.|.++||.++++..++. ++++|||++..+  +++.+++++|
T Consensus       321 ~~~~g~~~~~~~~~~---~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~--e~i~~~~~~L  380 (391)
T 3bwn_A          321 LESYPAFAWLGTKEE---TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSRE--DVFNVFLERL  380 (391)
T ss_dssp             ECCCCSEEEEEESSS---CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCH--HHHHHHHHHH
T ss_pred             CCCcceEEEecCCcH---HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence             34566999999742   3556667799999999877543 789999998633  4455555554

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=1.7e-42  Score=340.27  Aligned_cols=324  Identities=18%  Similarity=0.255  Sum_probs=265.8

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCC--CCCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhc
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLK--FPYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~--~~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~  167 (423)
                      ++++|+.++++++++|++.+++.+..  ...+|++. ..++|+++++++    |  +++++|++|+|+++++..++++++
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~  110 (392)
T 3b1d_A           32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFT  110 (392)
Confidence            78999999999999999999988732  23567765 788999999876    4  567899999999999999999999


Q ss_pred             CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-C--CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-S--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                      ++||+|+++.|+|..+...++..|++++.+|.+ .  +|.+|++++++.+.+.++++|++++|+||||.+++.+++++|+
T Consensus       111 ~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~  190 (392)
T 3b1d_A          111 KEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIG  190 (392)
Confidence            999999999999999999999899999999864 2  3568999999998756789999999999999999977777766


Q ss_pred             cC----CCEEEEccCCccccCCCc---hhhhhcc--CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCC--
Q 014492          245 EM----PILVVLDEAYTEFSGLES---RMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY--  312 (423)
Q Consensus       245 ~~----~~~li~Deay~~~~~~~~---~~~~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~--  312 (423)
                      +.    |+++|+||+|.++.+.+.   ....+..  .+++++++|+||.+|++|+|+||+++++ ++++.+......+  
T Consensus       191 ~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  270 (392)
T 3b1d_A          191 HLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNH  270 (392)
Confidence            64    899999999999876432   1222222  5788999999999999999999999975 5888887776655  


Q ss_pred             -CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCee-cCCCceEEEEEeCC-CCCHHHHHHHHH-hC
Q 014492          313 -NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLNP-YPSYSNFILCEVTS-GMDAKKLKDDLA-KM  386 (423)
Q Consensus       313 -~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~-~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~  386 (423)
                       +.+++++.++.++|++ .+++++.+++++++++++.+.|++ ++++.+ .+.+++++|++++. +.+..++.+.|. ++
T Consensus       271 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~  350 (392)
T 3b1d_A          271 HEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQA  350 (392)
Confidence             4688889988888876 578889999999999999999987 655554 34556667899874 356788999996 88


Q ss_pred             CcEEEeCCCCC--CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          387 GVMIRHYNNKE--LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       387 gI~v~~~~~~~--~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ||.++++..+.  .++++||+++..+  +++.+++++|
T Consensus       351 gi~v~~g~~f~~~~~~~iRi~~~~~~--e~i~~~l~~l  386 (392)
T 3b1d_A          351 KVILNRGSDYGSEGELHARLNIAAPK--SLVEEICKRI  386 (392)
Confidence            99999877643  4679999998753  6688887766

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=1.4e-38  Score=314.03  Aligned_cols=316  Identities=17%  Similarity=0.173  Sum_probs=247.6

Q ss_pred             CCCeeEcCCCCC-CCCCCHHHHHHHhcCC--CCCCC-CCcchHHHHHHHHHHh-CCC-----CCcEE--EeCCHHHHHHH
Q 014492           94 PEDIVKIDANEN-PYGPPPEVREALGQLK--FPYIY-PDPESRRLRAALAKDS-GLE-----SDHIL--VGCGADELIDL  161 (423)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~~--~~~~Y-~~~g~~~lr~~ia~~~-g~~-----~~~i~--~t~G~~~al~~  161 (423)
                      ..++|+|+.|++ ++..++.+.+++.+..  ..++| +..|..++|+++++++ |..     +++|.  .+.|+++++..
T Consensus        40 ~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~  119 (409)
T 4eu1_A           40 AKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRI  119 (409)
T ss_dssp             CSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHH
T ss_pred             CcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHH
Confidence            467899999986 7877777778777642  23567 5568899999999986 665     67884  48999999887


Q ss_pred             H---HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcC
Q 014492          162 I---MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       162 ~---~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~  234 (423)
                      +   ++.++++||.|+++.|+|..+...++..|++++.+|.  ++++.+|++++++.+++  .+++++++++||||||.+
T Consensus       120 ~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~  199 (409)
T 4eu1_A          120 GGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVD  199 (409)
T ss_dssp             HHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCC
T ss_pred             HHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCC
Confidence            5   4455789999999999999999999999999999996  45688999999999963  356677779999999999


Q ss_pred             CCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhh-hhccCCcEEEEccChhhhcccCcccccc---ccCHH-
Q 014492          235 INDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIVLRTFSKRAGLAGLRVGYG---AFPLS-  300 (423)
Q Consensus       235 ~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i---~~~~~-  300 (423)
                      ++.+++++|++.    |+++|+||+|.++.+++.     ... ..+..+++++++||||.||++|+|+||+   +.+++ 
T Consensus       200 ~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~  279 (409)
T 4eu1_A          200 PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEE  279 (409)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHH
T ss_pred             CCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHH
Confidence            999997777654    999999999999987651     122 2245678899999999999999999995   56777 


Q ss_pred             ---HHHHHHHhcC--CCCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCCC---Ce-ecCCCce
Q 014492          301 ---IIEYLWRAKQ--PYNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVPF---LN-PYPSYSN  364 (423)
Q Consensus       301 ---~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~---~~-~~p~~~~  364 (423)
                         +++.+.....  .++.+.++|.++..+|++.       +++++.+++++++++++.+.|++++.   +. ..|.+++
T Consensus       280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~  359 (409)
T 4eu1_A          280 AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGM  359 (409)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSS
T ss_pred             HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceE
Confidence               6666655432  2567789999999999874       23677889999999999999998762   33 3567888


Q ss_pred             EEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492          365 FILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  422 (423)
                      |+|+.++    . ++...|+ ++||.+.++.        ||+++  +.++++++.++|+++
T Consensus       360 ~~~~~~~----~-~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~i~~~~~~l~~~  407 (409)
T 4eu1_A          360 MAYTGLT----R-EQVELLRSEYHIYMTLNG--------RAAVSGLNSTNVEYVSQAIHNV  407 (409)
T ss_dssp             EEECCCC----H-HHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             EEEeCCC----H-HHHHHHHHcCCEEEcCCC--------EEEEEecCHhhHHHHHHHHHHH
Confidence            8886653    3 4455655 7899999864        88886  455677777777653

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=9.2e-39  Score=314.41  Aligned_cols=327  Identities=14%  Similarity=0.157  Sum_probs=247.6

Q ss_pred             hHHHHHHhCCC-CCCeeEcCCCCC-CCCCC----HHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHhCC------CC
Q 014492           83 FEVLSIQLGRK-PEDIVKIDANEN-PYGPP----PEVREALGQL---KFPYIYPD-PESRRLRAALAKDSGL------ES  146 (423)
Q Consensus        83 ~~~~~~~~~~~-~~~~i~l~~~~~-~~~~~----~~v~~al~~~---~~~~~Y~~-~g~~~lr~~ia~~~g~------~~  146 (423)
                      +..+...+... ..++|+|+.|.+ ++..+    +.+.+++.+.   .....|+. .|.+++|++++++++.      ++
T Consensus        15 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~   94 (401)
T 7aat_A           15 ILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS   94 (401)
T ss_dssp             HHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred             hHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc
Confidence            44444444333 245799999986 54322    4677777653   13467854 5889999999999853      38


Q ss_pred             CcEEE--eCCHHHHHHHHHHHhc---CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhc--C
Q 014492          147 DHILV--GCGADELIDLIMRCVL---DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER--E  217 (423)
Q Consensus       147 ~~i~~--t~G~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~--~  217 (423)
                      ++|++  |+|+++++.+++..+.   ++||+|++++|+|..|...++..|++++.+|.+  +++++|++++++.+.+  .
T Consensus        95 ~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  174 (401)
T 7aat_A           95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPE  174 (401)
T ss_dssp             TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCT
T ss_pred             CceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCC
Confidence            89977  9999999998887664   899999999999999999999999999999963  3678999988877753  5


Q ss_pred             CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---h--hh-hhccCCcEEEEccChhhhcc
Q 014492          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---R--ME-WVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~--~~-~~~~~~~~i~i~S~SK~~g~  287 (423)
                      +++++++++||||||.+++.+++++|++.    |+++|+||+|.++.+++.   .  .. .....+++++++||||.||+
T Consensus       175 ~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  254 (401)
T 7aat_A          175 KSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGL  254 (401)
T ss_dssp             TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCC
T ss_pred             CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCccccc
Confidence            68899999999999999999998888764    999999999999987542   1  11 12457889999999999999


Q ss_pred             cCcccccccc---CHH----HHHHHHHhcCC--CCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHc
Q 014492          288 AGLRVGYGAF---PLS----IIEYLWRAKQP--YNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLK  351 (423)
Q Consensus       288 ~G~R~G~i~~---~~~----~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~  351 (423)
                      +|+|+||+++   +++    +.+.+......  .+.+..++.++..++++.       +++++.+++++++++++.+.|+
T Consensus       255 ~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~  334 (401)
T 7aat_A          255 YGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK  334 (401)
T ss_dssp             GGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999876   555    44444443332  456677888887788763       3467788899999999999998


Q ss_pred             cCC---CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          352 DVP---FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       352 ~~~---~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                      +++   .+. ..|.+++|+|+.++    .+.+...+.++||.+.++        +||+++  +.++++++.++|++
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~  398 (401)
T 7aat_A          335 KEGSSHNWQHITDQIGMFCFTGLK----PEQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQ  398 (401)
T ss_dssp             HTTCCSCCHHHHHCCSSEEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred             hcCCCCCCceecCCcceEEecCCC----HHHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHH
Confidence            874   233 35678888997663    455544445889999765        499997  34556777777665

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=2.4e-38  Score=310.67  Aligned_cols=315  Identities=15%  Similarity=0.171  Sum_probs=247.8

Q ss_pred             CCeeEcCCCC---CC--CCCCHHHHHHHhcC-C--CCCCC-CCcchHHHHHHHHHHh---C---CCCCcEEE--eCCHHH
Q 014492           95 EDIVKIDANE---NP--YGPPPEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHILV--GCGADE  157 (423)
Q Consensus        95 ~~~i~l~~~~---~~--~~~~~~v~~al~~~-~--~~~~Y-~~~g~~~lr~~ia~~~---g---~~~~~i~~--t~G~~~  157 (423)
                      .++|+|+.|.   +.  ..+++.+.+++.+. .  ..++| +..+..++|+++++++   +   +++++|++  |+|+++
T Consensus        26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~  105 (396)
T 2q7w_A           26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG  105 (396)
T ss_dssp             --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred             CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchh
Confidence            5679999997   22  25678999888763 1  33578 5668899999999998   3   34789998  999999


Q ss_pred             HHHHHHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcC--CceEEEEcCCCCCc
Q 014492          158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPD  231 (423)
Q Consensus       158 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPt  231 (423)
                      +++.+++.+  +.+||+|+++.|+|+.+...++..|++++.+|.+  +++.+|++++++.+.+.  +++++++++|||||
T Consensus       106 a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~npt  185 (396)
T 2q7w_A          106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPT  185 (396)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred             hHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence            999998765  4699999999999999999999999999999974  56789999999999643  46788889999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCC--c--hhhhh-ccCCcEEEEccChhhhcccCcccccccc---CH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL  299 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~  299 (423)
                      |.+++.+++++|++.    |+++|+||+|.++.+++  .  ....+ ...+++++++|+||.+|++|+|+||+++   ++
T Consensus       186 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~  265 (396)
T 2q7w_A          186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADS  265 (396)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence            999999988877764    99999999999988653  1  22222 2357899999999999999999999986   55


Q ss_pred             ----HHHHHHHHh-cCCC-CCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC---CCe-ecCCC
Q 014492          300 ----SIIEYLWRA-KQPY-NVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP---FLN-PYPSY  362 (423)
Q Consensus       300 ----~~~~~l~~~-~~~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~  362 (423)
                          ++++.+... ...+ +.+.+++.++..+|++.       +++++.+++++++++++.+.|++++   .+. ..|.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  345 (396)
T 2q7w_A          266 ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN  345 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC
T ss_pred             HHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCC
Confidence                455555442 2344 45899999999999875       5778888999999999999999876   233 35677


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                      ++|+|++++    .+.+.+.|.++||.+.++        +||+++  +.++++++.++|++
T Consensus       346 ~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~  394 (396)
T 2q7w_A          346 GMFSFSGLT----KEQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVA  394 (396)
T ss_dssp             SSEEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHH
T ss_pred             ceEEEecCC----HHHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHh
Confidence            889888764    455666666899999874        599998  66667777766654

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.1e-38  Score=322.19  Aligned_cols=297  Identities=19%  Similarity=0.239  Sum_probs=234.1

Q ss_pred             CCCCC-cchHHHHHHHHHHh-----CC--CCCcEEEeCCHHHHHHHHHHHhcCCCC----eEEEcCCCchhhHHHHHHCC
Q 014492          124 YIYPD-PESRRLRAALAKDS-----GL--ESDHILVGCGADELIDLIMRCVLDPGD----KIVDCPPTFTMYEFDAAVNG  191 (423)
Q Consensus       124 ~~Y~~-~g~~~lr~~ia~~~-----g~--~~~~i~~t~G~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g  191 (423)
                      ..|++ .|..++|+++++++     |+  ++++|++|+|+++++..+++.++++||    .|+++.|+|+.|...++..|
T Consensus       123 ~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g  202 (498)
T 3ihj_A          123 GSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELD  202 (498)
T ss_dssp             -----CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcC
Confidence            56854 47889999999986     44  678999999999999999999999875    99999999999999999999


Q ss_pred             CeEEEecCC--CCCCCCHHHHHHHhhcC----CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccC
Q 014492          192 AAVVKVPRK--SDFSLNVELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSG  261 (423)
Q Consensus       192 ~~~~~v~~~--~~~~~d~~~l~~~i~~~----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~  261 (423)
                      ++++.++.+  .+|.+|+++|++.+++.    ++++|+++|||||||.+++.+++++|++.    +++||+||+|.++.+
T Consensus       203 ~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~  282 (498)
T 3ihj_A          203 AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY  282 (498)
T ss_dssp             CEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred             CEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence            999999965  35799999999999743    58999999999999999999998888774    999999999999876


Q ss_pred             CCc--h--hhhh-c-------cCCcEEEEccChhhh-cccCccccccc---cCHHHHHHHHHhcCC-CCCcHHHHHHHHH
Q 014492          262 LES--R--MEWV-K-------KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAKQP-YNVSVAAEVAACA  324 (423)
Q Consensus       262 ~~~--~--~~~~-~-------~~~~~i~i~S~SK~~-g~~G~R~G~i~---~~~~~~~~l~~~~~~-~~~~~~~~~a~~~  324 (423)
                      ++.  .  ...+ .       ...++++++||||.| |++|+|+||++   .++++++.+.+.... ++.+.++|.++..
T Consensus       283 ~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~  362 (498)
T 3ihj_A          283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDI  362 (498)
T ss_dssp             CTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence            532  1  1111 1       234589999999999 88999999998   689999888766543 5678899999999


Q ss_pred             HhCC--------hHH---HHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-----------CCCHHHH-H
Q 014492          325 ALQN--------PIY---LEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-----------GMDAKKL-K  380 (423)
Q Consensus       325 ~l~~--------~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-----------~~~~~~l-~  380 (423)
                      +++.        .+|   .++++++++++++++.+.|++++++.+ .|.+++|+|+++..           +.+.+++ +
T Consensus       363 ~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~  442 (498)
T 3ihj_A          363 VVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYC  442 (498)
T ss_dssp             HTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHH
T ss_pred             HhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHH
Confidence            9874        133   356778899999999999999866664 46778889977641           3455664 4


Q ss_pred             HH-HHhCCcEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          381 DD-LAKMGVMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       381 ~~-L~~~gI~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .. |.++||.+++++.+   ...+++||+++..  .+++.+++++|
T Consensus       443 ~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~--~e~l~~~i~~L  486 (498)
T 3ihj_A          443 MKLLEETGICVVPGSGFGQREGTYHFRMTILPP--VEKLKTVLQKV  486 (498)
T ss_dssp             HHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSC--HHHHHHHHHHH
T ss_pred             HHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCC--HHHHHHHHHHH
Confidence            44 55899999997764   3456999999743  25566655554

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=2.9e-38  Score=310.02  Aligned_cols=317  Identities=15%  Similarity=0.166  Sum_probs=250.8

Q ss_pred             CCCeeEcCCCCC---C--CCCCHHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHh-CC--CCCcEEE--eCCHHHHH
Q 014492           94 PEDIVKIDANEN---P--YGPPPEVREALGQL---KFPYIYPD-PESRRLRAALAKDS-GL--ESDHILV--GCGADELI  159 (423)
Q Consensus        94 ~~~~i~l~~~~~---~--~~~~~~v~~al~~~---~~~~~Y~~-~g~~~lr~~ia~~~-g~--~~~~i~~--t~G~~~al  159 (423)
                      +.++|+|+.|++   .  ..+++.+.+++.+.   ...++|++ .+..++|+++++++ +.  ++++|++  |+|+++++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~  104 (394)
T 2ay1_A           25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGAL  104 (394)
T ss_dssp             CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHH
T ss_pred             CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHH
Confidence            456899999973   2  35678999888763   13467854 57899999999997 55  7889999  99999999


Q ss_pred             HHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCc
Q 014492          160 DLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVERE--KPKCIFLTSPNNPDGS  233 (423)
Q Consensus       160 ~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~  233 (423)
                      +.+++.+..  +||+|+++.|+|..+...++..|++++.+|.+  +++.+|++++++.+++.  +++++++++||||||.
T Consensus       105 ~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~  184 (394)
T 2ay1_A          105 RQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA  184 (394)
T ss_dssp             HHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence            999987754  99999999999999999999999999999974  56789999999999743  3567777999999999


Q ss_pred             CCCHHHHHHHHcC----CCEEEEccCCccccCCC--c--hhhhh-ccCCcEEEEccChhhhcccCcccccccc---CHHH
Q 014492          234 IINDEDLLKILEM----PILVVLDEAYTEFSGLE--S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAF---PLSI  301 (423)
Q Consensus       234 ~~~~~~l~~i~~~----~~~li~Deay~~~~~~~--~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~---~~~~  301 (423)
                      +++.+++++|++.    |+++|+||+|.++.+++  .  ....+ ...+++++++|+||.+|++|+|+||+++   ++++
T Consensus       185 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~  264 (394)
T 2ay1_A          185 NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAAT  264 (394)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHH
Confidence            9999988777664    99999999999988642  1  22222 2356899999999999999999999998   6665


Q ss_pred             HHH----HHHh-cCCC-CCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC---CCe-ecCCCce
Q 014492          302 IEY----LWRA-KQPY-NVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP---FLN-PYPSYSN  364 (423)
Q Consensus       302 ~~~----l~~~-~~~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~---~~~-~~p~~~~  364 (423)
                      ++.    +... ...+ +.+++++.++.++|++.       +++++.+++++++++++.+.|++++   .+. ..|.+++
T Consensus       265 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~  344 (394)
T 2ay1_A          265 RELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGM  344 (394)
T ss_dssp             HHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSS
T ss_pred             HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceE
Confidence            443    3222 2334 45888999999999875       4688889999999999999998764   233 3456799


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492          365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  422 (423)
                      |+|++++    .+.+.+.|.++||.+.++        +||+++  +.++++++.++|+++
T Consensus       345 ~~~~~~~----~~~~~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          345 FSRLGAT----PEQVKRIKEEFGIYMVGD--------SRINIAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             EEECCCC----HHHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             EEeeCCC----HHHHHHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHHHHHHc
Confidence            9998774    456666677899999875        499998  677778888777654

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=4.6e-38  Score=314.15  Aligned_cols=330  Identities=15%  Similarity=0.155  Sum_probs=253.1

Q ss_pred             CCchHHHHHHhCCCCC-CeeEcCCCCC-CCC----CCHHHHHHHhcC-----CCCCCC-CCcchHHHHHHHHHHh-CCC-
Q 014492           80 ILPFEVLSIQLGRKPE-DIVKIDANEN-PYG----PPPEVREALGQL-----KFPYIY-PDPESRRLRAALAKDS-GLE-  145 (423)
Q Consensus        80 ~~~~~~~~~~~~~~~~-~~i~l~~~~~-~~~----~~~~v~~al~~~-----~~~~~Y-~~~g~~~lr~~ia~~~-g~~-  145 (423)
                      .+++..+..++...+. +.|+|+.+.+ ++.    ..+.+.+++.++     ...+.| +..|.+++|+++++++ |.+ 
T Consensus        33 ~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~g~~~  112 (448)
T 3meb_A           33 PDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDS  112 (448)
T ss_dssp             CCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHHCTTC
T ss_pred             CChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhcCCCc
Confidence            4445555555554443 4699999976 543    236777774432     233567 4468999999999997 876 


Q ss_pred             ----CCcEEE--eCCHHHHHHH--HHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecC-CC--CCCCCHHHH
Q 014492          146 ----SDHILV--GCGADELIDL--IMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPR-KS--DFSLNVELI  210 (423)
Q Consensus       146 ----~~~i~~--t~G~~~al~~--~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~-~~--~~~~d~~~l  210 (423)
                          +++|++  |+|+++++++  .+..++.+||+|++++|+|..+...++    ..|++++.+|. +.  ++.+|++++
T Consensus       113 ~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l  192 (448)
T 3meb_A          113 KAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNT  192 (448)
T ss_dssp             HHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHH
T ss_pred             cccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHH
Confidence                689999  9999999988  455678899999999999999999999    99999999996 54  489999999


Q ss_pred             HHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc-----hhh-hhccCCcEEEE
Q 014492          211 ADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-----RME-WVKKHDNLIVL  278 (423)
Q Consensus       211 ~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~-----~~~-~~~~~~~~i~i  278 (423)
                      ++.+++  .+++++++++||||||.+++.+++++|++.    |+++|+||+|.+|.+++.     ... .....++++++
T Consensus       193 ~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~  272 (448)
T 3meb_A          193 KKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVA  272 (448)
T ss_dssp             HHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEE
T ss_pred             HHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEE
Confidence            999975  357788889999999999999998777664    999999999999987641     112 22456889999


Q ss_pred             ccChhhhcccCcccccc--cc--------C-H----HHHHHHHHhcC-C-CCCcHHHHHHHHHHhCCh-------HHHHH
Q 014492          279 RTFSKRAGLAGLRVGYG--AF--------P-L----SIIEYLWRAKQ-P-YNVSVAAEVAACAALQNP-------IYLEK  334 (423)
Q Consensus       279 ~S~SK~~g~~G~R~G~i--~~--------~-~----~~~~~l~~~~~-~-~~~~~~~~~a~~~~l~~~-------~~~~~  334 (423)
                      +||||.||++|+|+||+  ++        + +    ++++.+..... . .+++.++|.++..+|.+.       +.+++
T Consensus       273 ~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~  352 (448)
T 3meb_A          273 QSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKE  352 (448)
T ss_dssp             EECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred             ecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence            99999999999999998  65        3 4    56666665332 2 467889999999999885       23778


Q ss_pred             HHHHHHHHHHHHHHHHccC--CC------C-eecCCCceEEEEEeCCCCCHHHHHHHH-HhCCcEEEeCCCCCCCCeEEE
Q 014492          335 VKEALIKERERLFKLLKDV--PF------L-NPYPSYSNFILCEVTSGMDAKKLKDDL-AKMGVMIRHYNNKELKGYVRV  404 (423)
Q Consensus       335 ~~~~~~~~~~~l~~~L~~~--~~------~-~~~p~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~iRi  404 (423)
                      ++++++++++++.+.|+++  +.      + ...|.+++|+|+.++     .++...| .++||.+.+|+       .||
T Consensus       353 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~ll~~~gV~v~~G~-------gRi  420 (448)
T 3meb_A          353 MSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT-----PEHVDYLKEKWSIYLVKAG-------GRM  420 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC-----HHHHHHHHHHHCEEECSGG-------GEE
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC-----HHHHHHHHHhCCEEEeCCC-------cEE
Confidence            8899999999999999887  32      2 245788999998763     3555555 57899999875       199


Q ss_pred             EecC--hhhHHHHHHHHhh
Q 014492          405 SVGK--PEHTDALMECLMH  421 (423)
Q Consensus       405 s~~~--~~~~~~l~~al~~  421 (423)
                      |++.  .++++++.++|++
T Consensus       421 s~a~~~~~~i~~~~~~l~~  439 (448)
T 3meb_A          421 SMCGLTESNCDYVAEAIHD  439 (448)
T ss_dssp             EGGGCCTTTHHHHHHHHHH
T ss_pred             EEecCCHHHHHHHHHHHHH
Confidence            9974  4445555555543

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=8.3e-38  Score=308.70  Aligned_cols=317  Identities=14%  Similarity=0.172  Sum_probs=251.3

Q ss_pred             CCCCeeEcCCCCC--C---CCCCHHHHHHHhcCC----CCCCC-CCcchHHHHHHHHHHh-CC-----CCCcEEE--eCC
Q 014492           93 KPEDIVKIDANEN--P---YGPPPEVREALGQLK----FPYIY-PDPESRRLRAALAKDS-GL-----ESDHILV--GCG  154 (423)
Q Consensus        93 ~~~~~i~l~~~~~--~---~~~~~~v~~al~~~~----~~~~Y-~~~g~~~lr~~ia~~~-g~-----~~~~i~~--t~G  154 (423)
                      .+.++|+|+.|.+  +   ..+++.+.+++.+..    ..++| +..+..++|+++++++ +.     ++++|++  |+|
T Consensus        28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~g  107 (412)
T 1ajs_A           28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLG  107 (412)
T ss_dssp             CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred             CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCC
Confidence            3467899999974  2   245688998887632    33568 6668899999999998 54     6789999  999


Q ss_pred             HHHHHHHHHH--HhcCCC-----CeEEEcCCCchhhHHHHHHCCCe-EEEecCC--CCCCCCHHHHHHHhhc--CCceEE
Q 014492          155 ADELIDLIMR--CVLDPG-----DKIVDCPPTFTMYEFDAAVNGAA-VVKVPRK--SDFSLNVELIADAVER--EKPKCI  222 (423)
Q Consensus       155 ~~~al~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~v~~~--~~~~~d~~~l~~~i~~--~~~~~i  222 (423)
                      +++++.++++  .++++|     |+|+++.|+|..+...++..|++ ++.+|.+  +++.+|++++++.+.+  .+++++
T Consensus       108 g~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v  187 (412)
T 1ajs_A          108 GTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFV  187 (412)
T ss_dssp             HHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEE
T ss_pred             cHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEE
Confidence            9999999964  456899     99999999999999999999999 9999963  5678999999999874  267788


Q ss_pred             EEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC---c--hhhhh-ccCCcEEEEccChhhhcccCccc
Q 014492          223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRV  292 (423)
Q Consensus       223 ~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~~~i~i~S~SK~~g~~G~R~  292 (423)
                      ++++||||||.+++.+++++|++.    |++||+||+|.++.+++   .  ....+ ...++++++.|+||.+|++|+|+
T Consensus       188 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri  267 (412)
T 1ajs_A          188 LHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERV  267 (412)
T ss_dssp             EESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred             EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcce
Confidence            889999999999999988877764    99999999999988753   2  22222 24678999999999999889999


Q ss_pred             ccccc---CHH----HHHHHHH-hcCCCC-CcHHHHHHHHHHhCChH-------HHHHHHHHHHHHHHHHHHHHccCC--
Q 014492          293 GYGAF---PLS----IIEYLWR-AKQPYN-VSVAAEVAACAALQNPI-------YLEKVKEALIKERERLFKLLKDVP--  354 (423)
Q Consensus       293 G~i~~---~~~----~~~~l~~-~~~~~~-~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~~~~--  354 (423)
                      ||+++   +++    +++.+.. ....+. .+.+++.++.++|++.+       ++++.+++++++++++.+.|++++  
T Consensus       268 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  347 (412)
T 1ajs_A          268 GNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTP  347 (412)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99999   887    4554554 334454 58899999999998753       678889999999999999999876  


Q ss_pred             -CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhh
Q 014492          355 -FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMH  421 (423)
Q Consensus       355 -~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~  421 (423)
                       .+. ..|.+++|+|+.++    ...+...|.++||.++++        +||+++  +.++++++.++|++
T Consensus       348 ~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~gv~v~~~--------~Ris~~~~~~~~i~~~~~~l~~  406 (412)
T 1ajs_A          348 GTWNHITDQIGMFSFTGLN----PKQVEYLINQKHIYLLPS--------GRINMCGLTTKNLDYVATSIHE  406 (412)
T ss_dssp             SCCHHHHHCCSSEEECCCC----HHHHHHHHHTTCEECCTT--------SEEEGGGCCTTTHHHHHHHHHH
T ss_pred             CCeeEEcCCCceEEEeCCC----HHHHHHHHHhCCEEecCC--------cEEEeeeCCHHHHHHHHHHHHH
Confidence             233 35678899998663    444555566899999874        499998  56666666655543

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=1.2e-37  Score=307.62  Aligned_cols=318  Identities=16%  Similarity=0.182  Sum_probs=248.4

Q ss_pred             CCCCeeEcCCCCC-CC----CCCHHHHHHHhc-CC---CCCCC-CCcchHHHHHHHHHHh-C-----CCCCcEEE--eCC
Q 014492           93 KPEDIVKIDANEN-PY----GPPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDS-G-----LESDHILV--GCG  154 (423)
Q Consensus        93 ~~~~~i~l~~~~~-~~----~~~~~v~~al~~-~~---~~~~Y-~~~g~~~lr~~ia~~~-g-----~~~~~i~~--t~G  154 (423)
                      .+.++|+|+.|.+ +.    .+++.+.+++.+ ..   ..++| +..|..++|+++++++ +     +++++|++  |+|
T Consensus        27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g  106 (412)
T 1yaa_A           27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLS  106 (412)
T ss_dssp             CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred             CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccc
Confidence            3467899999874 22    467889988876 42   23568 5568899999999998 4     35789999  999


Q ss_pred             HHHHHHHHH--HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-C-CCCCCCHHHHHHHhhcCC-ceEE-EEcCCC
Q 014492          155 ADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVEREK-PKCI-FLTSPN  228 (423)
Q Consensus       155 ~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~~~-~~~i-~l~~p~  228 (423)
                      +++++.+++  ..++.+||+|+++.|+|..+...++..|++++.+|. + +++.+|++++++.+.+.+ .+.+ ++++||
T Consensus       107 ~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~  186 (412)
T 1yaa_A          107 GTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAH  186 (412)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSC
T ss_pred             hHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence            999999883  344579999999999999999999999999999997 3 367899999999987432 3444 458999


Q ss_pred             CCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCC---c--hhhhh-ccCC---cEEEEccChhhhcccCcccccc
Q 014492          229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHD---NLIVLRTFSKRAGLAGLRVGYG  295 (423)
Q Consensus       229 NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~---~--~~~~~-~~~~---~~i~i~S~SK~~g~~G~R~G~i  295 (423)
                      ||||.+++.+++++|++.    |+++|+||+|.++.+++   .  ....+ ...+   ++++++|+||.+|++|+|+||+
T Consensus       187 nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~  266 (412)
T 1yaa_A          187 NPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCF  266 (412)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEE
Confidence            999999999988877664    99999999999887653   2  22222 2345   8999999999999889999999


Q ss_pred             c--c-----CHH----HHHHHHHh-cCCC-CCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC-
Q 014492          296 A--F-----PLS----IIEYLWRA-KQPY-NVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP-  354 (423)
Q Consensus       296 ~--~-----~~~----~~~~l~~~-~~~~-~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~-  354 (423)
                      +  +     +++    +++.+... ...+ +.+.++|.++..+|++.       +++++.+++++++++++.+.|++++ 
T Consensus       267 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  346 (412)
T 1yaa_A          267 HLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGT  346 (412)
T ss_dssp             EEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            8  7     566    77777763 3334 55889999999999876       3688899999999999999998875 


Q ss_pred             --CCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492          355 --FLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  422 (423)
Q Consensus       355 --~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  422 (423)
                        .+. ..|.+++|+|+.+    +...+...|.++||.+.+        ++||+++  +.++++++.++|+++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~--------~~Ris~~~~~~~~i~~~~~~l~~~  407 (412)
T 1yaa_A          347 PGNWDHIVNQCGMFSFTGL----TPQMVKRLEETHAVYLVA--------SGRASIAGLNQGNVEYVAKAIDEV  407 (412)
T ss_dssp             SSCCTHHHHCCSSEEECCC----CHHHHHHHHHHHCEECCT--------TSEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             CCCeeeeccCceEEEeeCC----CHHHHHHHHHhCCEEecc--------CcEEEEccCCHhHHHHHHHHHHHH
Confidence              233 3567788888755    455664445588999987        4699998  667777777777653

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=9.7e-38  Score=307.06  Aligned_cols=338  Identities=15%  Similarity=0.116  Sum_probs=250.8

Q ss_pred             HhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCC---CCC--CCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHH
Q 014492           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANE---NPY--GPPPEVREALGQL---KFPYIY-PDPESRRLRAALAK  140 (423)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~---~~~--~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~  140 (423)
                      ++.++... |.+++..+.+++..+..+.|+|+.|.   ..-  +..|.|++|...+   ...+.| |..|.++||+++++
T Consensus        20 ~~~~v~~~-p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~   98 (420)
T 4h51_A           20 RWQKIQAQ-APDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVK   98 (420)
T ss_dssp             HHHTCCCC-CCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred             HHhCCCCC-CCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHH
Confidence            45555544 55667777777766666689999983   222  3347888876552   334678 77799999999999


Q ss_pred             Hh-C--CCCCc--EEEeCCHHHHHHHHHHHh----cCCCCeEEEcCCCchhhHHHHHHCCCeEE-Eec--CCCCCCCCHH
Q 014492          141 DS-G--LESDH--ILVGCGADELIDLIMRCV----LDPGDKIVDCPPTFTMYEFDAAVNGAAVV-KVP--RKSDFSLNVE  208 (423)
Q Consensus       141 ~~-g--~~~~~--i~~t~G~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-~v~--~~~~~~~d~~  208 (423)
                      ++ |  ...+.  .+.|.|++.++...+..+    ++|||+|++++|+|+.|...++..|++.+ .++  .+.++.+|.+
T Consensus        99 ~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~  178 (420)
T 4h51_A           99 IIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFE  178 (420)
T ss_dssp             HHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHH
T ss_pred             HhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHH
Confidence            85 3  23333  345888888876665543    57999999999999999999999999744 444  2356778999


Q ss_pred             HHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch------hhhhccCCcEE
Q 014492          209 LIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKKHDNLI  276 (423)
Q Consensus       209 ~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~------~~~~~~~~~~i  276 (423)
                      .+.+.+..  ++++++++++||||||.+++.+++++|++.    ++++|+||+|.+|.+++..      ....+..++++
T Consensus       179 ~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (420)
T 4h51_A          179 GMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVL  258 (420)
T ss_dssp             HHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCE
T ss_pred             HHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEE
Confidence            98887753  466788888999999999999999999886    9999999999999876422      12234567899


Q ss_pred             EEccChhhhcccCccccccccCHHHHHH-------HHHhc--CCCCCcHHHHHHHHHHhCChH-------HHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEY-------LWRAK--QPYNVSVAAEVAACAALQNPI-------YLEKVKEALI  340 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~-------l~~~~--~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~  340 (423)
                      ++.||||.|+++|+|+||++++.+..+.       +....  ...+++..+|.++..++.+++       .++.++++++
T Consensus       259 ~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~  338 (420)
T 4h51_A          259 LAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIR  338 (420)
T ss_dssp             EEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999875433222       22222  235678889999999998842       3567788999


Q ss_pred             HHHHHHHHHHccCC----CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhHHH
Q 014492          341 KERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHTDA  414 (423)
Q Consensus       341 ~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~  414 (423)
                      ++|+.+.+.|++++    |..+.++.|+|.|+.+    +. +.++.|.++||++.+++        |||++  +.+++++
T Consensus       339 ~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gl----s~-e~v~~L~e~~Vy~~~~g--------Ris~Agl~~~ni~~  405 (420)
T 4h51_A          339 TMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGL----SK-AQCEYCQNHNIFITVSG--------RANMAGLTHETALM  405 (420)
T ss_dssp             HHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCC----CH-HHHHHHHHTTEECCTTC--------EEEGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeecCCCceEEecCc----CH-HHHHHHHhCCEEEcCCC--------EEEeccCCHHHHHH
Confidence            99999999998864    3334578899998755    44 44577889999988765        99997  4566677


Q ss_pred             HHHHHhh
Q 014492          415 LMECLMH  421 (423)
Q Consensus       415 l~~al~~  421 (423)
                      +.++|.+
T Consensus       406 ~a~aI~~  412 (420)
T 4h51_A          406 LAQTIND  412 (420)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7666654

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=6.2e-38  Score=317.19  Aligned_cols=296  Identities=17%  Similarity=0.277  Sum_probs=235.6

Q ss_pred             CCCCC-cchHHHHHHHHHHhC------CCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhHHHHHHCCCeEE
Q 014492          124 YIYPD-PESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV  195 (423)
Q Consensus       124 ~~Y~~-~g~~~lr~~ia~~~g------~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~  195 (423)
                      ..|++ .|..++|++++++++      +++++|++|+|+++++..++..++ ++||.|+++.|+|..|...++..|++++
T Consensus       128 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~  207 (500)
T 3tcm_A          128 GAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALV  207 (500)
T ss_dssp             SSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEE
T ss_pred             CCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEE
Confidence            56854 578999999999873      678999999999999999999998 8999999999999999999999999999


Q ss_pred             EecCCC--CCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc
Q 014492          196 KVPRKS--DFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES  264 (423)
Q Consensus       196 ~v~~~~--~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~  264 (423)
                      .++.++  +|.+|+++|++.+++.     ++++|++++|+||||.+++.+++++|++.    |+++|+||+|.++.+++.
T Consensus       208 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~  287 (500)
T 3tcm_A          208 PYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDN  287 (500)
T ss_dssp             EEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTT
T ss_pred             EEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCC
Confidence            999654  5799999999999742     78999999999999999999999998664    999999999999876421


Q ss_pred             --h--hh----hh---ccCCcEEEEccChhhh-cccCcccccccc---CHHHHHHHHHhcC-CCCCcHHHHHHHHHHhCC
Q 014492          265 --R--ME----WV---KKHDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQ-PYNVSVAAEVAACAALQN  328 (423)
Q Consensus       265 --~--~~----~~---~~~~~~i~i~S~SK~~-g~~G~R~G~i~~---~~~~~~~l~~~~~-~~~~~~~~~~a~~~~l~~  328 (423)
                        .  ..    .+   ....++++++||||.| |++|+|+||+++   ++++++.+.+... .++.+.++|.++..+++.
T Consensus       288 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~  367 (500)
T 3tcm_A          288 KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNP  367 (500)
T ss_dssp             CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSC
T ss_pred             CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcC
Confidence              1  11    12   2234689999999998 899999999998   8999988877654 467889999999999874


Q ss_pred             h-----------HHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeC--C---------CCCHHH-HH-HHH
Q 014492          329 P-----------IYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVT--S---------GMDAKK-LK-DDL  383 (423)
Q Consensus       329 ~-----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~--~---------~~~~~~-l~-~~L  383 (423)
                      .           ++.++++++++++++++.+.|++++++.+ .|.+++|+|+++.  .         +...++ ++ +.|
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll  447 (500)
T 3tcm_A          368 PKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLL  447 (500)
T ss_dssp             CCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHH
Confidence            2           34567788899999999999999865654 5677888996553  1         112233 33 445


Q ss_pred             HhCCcEEEeCCCC---CCCCeEEEEecChhhHHHHHHHHhh
Q 014492          384 AKMGVMIRHYNNK---ELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       384 ~~~gI~v~~~~~~---~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      .++||.+++++.+   .+.+++||+++..+  +++.+++++
T Consensus       448 ~~~gI~v~pg~~f~~~~g~~~iRis~~~~~--e~i~~~i~~  486 (500)
T 3tcm_A          448 ESTGIVVVPGSGFGQVPGTWHFRCTILPQE--DKIPAVISR  486 (500)
T ss_dssp             HHHCEECEESTTTCCCTTCCBEEEESCSCT--TTHHHHHHH
T ss_pred             HHCCEEEEeCcccCCCCCCCEEEEEECCCH--HHHHHHHHH
Confidence            5889999998774   34569999998432  334444443

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1e-38  Score=325.34  Aligned_cols=320  Identities=16%  Similarity=0.222  Sum_probs=239.7

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc-chHHHHHHHHHHh-------CC---CCCcEEEeCCHHHHHHHHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GL---ESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~-g~~~lr~~ia~~~-------g~---~~~~i~~t~G~~~al~~~~~~  165 (423)
                      +++|+.|++.++ ++.+.+++.+......||++ |..++|+++++.+       ++   ++++|++|+|+++++..++.+
T Consensus       106 ~i~l~~g~~~~~-~~~~~~al~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~  184 (546)
T 2zy4_A          106 SLSYVRDQLGLD-PAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES  184 (546)
T ss_dssp             HHHHHHHTSCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred             hhecccCCCCCC-ChHHHHHHHHhhhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence            688888888874 45666666552223678766 7888998887754       22   358999999999999999987


Q ss_pred             -----hcCCCCeEEEcCCCchhhHHHHHH--CCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          166 -----VLDPGDKIVDCPPTFTMYEFDAAV--NGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       166 -----l~~~gd~Vl~~~p~y~~~~~~~~~--~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                           ++++||.|++++|+|+.|...+..  .|++++.+|.+  .+|.+|++++++.+. .++++|++|+||||||.+++
T Consensus       185 l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~p~NPtG~~~~  263 (546)
T 2zy4_A          185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD-PAIKIFFCVNPSNPPSVKMD  263 (546)
T ss_dssp             HHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-TTEEEEEEESSCSSSCBCCC
T ss_pred             hhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-CCCeEEEEECCCCCCCccCC
Confidence                 478999999999999999988665  46899999864  357799999998875 68999999999999999999


Q ss_pred             HHHHHHHH-----cC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHh-
Q 014492          237 DEDLLKIL-----EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRA-  308 (423)
Q Consensus       237 ~~~l~~i~-----~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~-  308 (423)
                      .+++++|+     +. |++||+||+|.+|.++....... ..+++++++||||.+|++|+|+||++++++ +++++.+. 
T Consensus       264 ~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~  342 (546)
T 2zy4_A          264 QRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAI-CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKL  342 (546)
T ss_dssp             HHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHH-CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHh-CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhc
Confidence            98877654     33 89999999999987643222222 236899999999999999999999999875 77766321 


Q ss_pred             ------------c-------------------------CCCCCcHHHHHHH-----HHHhCC-hHHHHHHHHHHHHHHHH
Q 014492          309 ------------K-------------------------QPYNVSVAAEVAA-----CAALQN-PIYLEKVKEALIKERER  345 (423)
Q Consensus       309 ------------~-------------------------~~~~~~~~~~~a~-----~~~l~~-~~~~~~~~~~~~~~~~~  345 (423)
                                  .                         ...+++.+.|.++     .+++++ ..|.+++++.++++++.
T Consensus       343 p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~  422 (546)
T 2zy4_A          343 QESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETT  422 (546)
T ss_dssp             CHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence                        1                         1135677877763     344554 57889999999999999


Q ss_pred             HHHHHccCCCCeecCCCceEEEEEeCC----------------CCCH-HHHHHHHHhCCcEEEeCCCCC-CCCeEEEEec
Q 014492          346 LFKLLKDVPFLNPYPSYSNFILCEVTS----------------GMDA-KKLKDDLAKMGVMIRHYNNKE-LKGYVRVSVG  407 (423)
Q Consensus       346 l~~~L~~~~~~~~~p~~~~~~~~~~~~----------------~~~~-~~l~~~L~~~gI~v~~~~~~~-~~~~iRis~~  407 (423)
                      +.+.|. +++....+.+++|+|++++.                +.+. +.+.+.|.++||.+.||..++ .++++||+++
T Consensus       423 l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~  501 (546)
T 2zy4_A          423 LYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA  501 (546)
T ss_dssp             HHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS
T ss_pred             HHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec
Confidence            999986 54322345677889999852                1223 335566679999999988743 4679999998


Q ss_pred             C--hhhHHHHHHHHh
Q 014492          408 K--PEHTDALMECLM  420 (423)
Q Consensus       408 ~--~~~~~~l~~al~  420 (423)
                      .  .++.+++.++|+
T Consensus       502 ~~~~e~i~~~~~~l~  516 (546)
T 2zy4_A          502 NLNEYEYAAIGRALR  516 (546)
T ss_dssp             SSCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH
Confidence            5  333334444444

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=2.1e-38  Score=313.32  Aligned_cols=322  Identities=17%  Similarity=0.192  Sum_probs=243.2

Q ss_pred             CCeeEcCCCCCCCCCC--HHHHHHHhcC-CC------CCCCCC-cchHHHHHHHHHHh------CCCCCcEEEeCCHHHH
Q 014492           95 EDIVKIDANENPYGPP--PEVREALGQL-KF------PYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADEL  158 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~--~~v~~al~~~-~~------~~~Y~~-~g~~~lr~~ia~~~------g~~~~~i~~t~G~~~a  158 (423)
                      .++|+|+.+.++..++  +.+.+++.+. ..      ...|++ .|..++|+++++++      ++++++|++|+|++++
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~a  110 (417)
T 3g7q_A           31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSA  110 (417)
T ss_dssp             -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHH
Confidence            5689999998877433  4556666553 11      136854 47899999999997      5788999999999999


Q ss_pred             HHHHHHHhcCCCC-----eEEEc-CCCchhhHHHHHH------CCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEc
Q 014492          159 IDLIMRCVLDPGD-----KIVDC-PPTFTMYEFDAAV------NGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       159 l~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~------~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      ++++++.++++||     .|+++ .|+|..+...+..      .+..+..++.+ .++.+|+++++  +. +++++|+++
T Consensus       111 l~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~  187 (417)
T 3g7q_A          111 FFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVS  187 (417)
T ss_dssp             HHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEE
T ss_pred             HHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc-cCceEEEEC
Confidence            9999999999987     89997 9999988766532      34455666543 24678999888  54 689999999


Q ss_pred             CCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh-hhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492          226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       226 ~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      +||||||.+++.+++++|++.    |+++|+||+|..+........ .....+++++++|||| ++++|+|+||++++++
T Consensus       188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~~  266 (417)
T 3g7q_A          188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGIIIANDK  266 (417)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEEECCHH
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEEEeCHH
Confidence            999999999998777777653    999999999986432111111 1123578999999999 7889999999999999


Q ss_pred             HHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHH---H-HHHHHHHHHHHHHHHHcc-CCC--Ce-ecCCCceEEEEEe
Q 014492          301 IIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLE---K-VKEALIKERERLFKLLKD-VPF--LN-PYPSYSNFILCEV  370 (423)
Q Consensus       301 ~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~---~-~~~~~~~~~~~l~~~L~~-~~~--~~-~~p~~~~~~~~~~  370 (423)
                      +++.+.....  .++.+.+++.++..++++.++.+   + ++++++++++.+.+.|++ ++.  +. ..|.+++|+|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~  346 (417)
T 3g7q_A          267 TITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWF  346 (417)
T ss_dssp             HHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEEC
T ss_pred             HHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEc
Confidence            9998887654  35678899999999998765433   3 667788888888888866 442  34 3578899999999


Q ss_pred             CC-CCCHHHHHHHHHhCCcEEEeCCCCC--C-------CCeEEEEecChhhHHHHHHHHhhh
Q 014492          371 TS-GMDAKKLKDDLAKMGVMIRHYNNKE--L-------KGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       371 ~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~-------~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +. +.+..++.+.|.++||.++++..+.  .       ++++||+++.  +.+++.+++++|
T Consensus       347 ~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l  406 (417)
T 3g7q_A          347 KDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKIL  406 (417)
T ss_dssp             TTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHH
Confidence            86 6789999999999999999876521  1       5799999986  246677777665

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=2.3e-39  Score=321.32  Aligned_cols=308  Identities=16%  Similarity=0.114  Sum_probs=246.4

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhc-C-CC-CCC--CCCc--c---hHHHHHHHHHHhC------CCCCcEEEeCCHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQ-L-KF-PYI--YPDP--E---SRRLRAALAKDSG------LESDHILVGCGADE  157 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~-~~-~~~--Y~~~--g---~~~lr~~ia~~~g------~~~~~i~~t~G~~~  157 (423)
                      +..+|+|+.+++++++++.+.+++.+ + .. ...  |++.  |   ..+||++++++++      +++++|++|+|+++
T Consensus        55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~  134 (427)
T 2hox_A           55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQ  134 (427)
T ss_dssp             TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHH
T ss_pred             CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHH
Confidence            34679999999999877777777765 2 12 233  8654  6   7999999999985      67899999999999


Q ss_pred             HHHHHHHHh--------cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492          158 LIDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (423)
Q Consensus       158 al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (423)
                      ++.+++.++        +++||.|+++.|+|..|...++..|++++.      +.+|+++|++.+. .++|+|++++|||
T Consensus       135 al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~-~~~k~v~l~~p~N  207 (427)
T 2hox_A          135 LIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSN-PEQYIEMVTSPNN  207 (427)
T ss_dssp             HHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSC-GGGEEEEEESSCT
T ss_pred             HHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee------ecCCHHHHHHhhc-CCceEEEEcCCCC
Confidence            999999999        899999999999999999999999988764      3467788888876 5789999999999


Q ss_pred             CcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccccc-CHHHHHHHHHh
Q 014492          230 PDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRA  308 (423)
Q Consensus       230 PtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~  308 (423)
                      |||.+++ +.+    + ++..+.|++|.+   .......+. .+++++++||||.+|++|+|+||+++ ++++++++.+.
T Consensus       208 PtG~~~~-~~l----~-~~~~i~d~~~~~---~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~  277 (427)
T 2hox_A          208 PEGLLRH-AVI----K-GCKSIYDMVYYW---PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY  277 (427)
T ss_dssp             TTCCCCC-CSS----T-TCEEEEECTTCS---TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH
T ss_pred             CcccccH-HHH----c-CCCEEEeecccC---CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHH
Confidence            9999999 533    2 567888888753   111111122 57889999999999999999999999 58999988876


Q ss_pred             cCC--CCCcHHHHHHHHHHhCCh------------HHHHHHHHHHHHHHHHHHHHHccCCCCee---------------c
Q 014492          309 KQP--YNVSVAAEVAACAALQNP------------IYLEKVKEALIKERERLFKLLKDVPFLNP---------------Y  359 (423)
Q Consensus       309 ~~~--~~~~~~~~~a~~~~l~~~------------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---------------~  359 (423)
                      ...  ++++.++|.++..+|++.            +++++.+++++++++++.+.|++++++.+               .
T Consensus       278 ~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~  357 (427)
T 2hox_A          278 MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMR  357 (427)
T ss_dssp             HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEE
T ss_pred             HHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccC
Confidence            643  578999999998888752            35667889999999999999998743332               3


Q ss_pred             CCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCC-CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          360 PSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKE-LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       360 p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~-~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.+++|+|++++.  +..++++.|+ ++||.++++..++ .++++|||++..  .++|.+++++|
T Consensus       358 p~~g~f~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~--~e~l~~~l~~l  418 (427)
T 2hox_A          358 PPSPSYAWVKCEW--EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKT--QDDFDQLMYYL  418 (427)
T ss_dssp             CCCCSEEEEEECS--GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSC--HHHHHHHHHHH
T ss_pred             CCCceEEEEECCC--cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCC--HHHHHHHHHHH
Confidence            5569999999974  4566778775 8999999987644 378999999974  36788888776

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=1.6e-38  Score=323.68  Aligned_cols=322  Identities=19%  Similarity=0.196  Sum_probs=247.9

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHh-cCCCCCCC-CCcchHHHHHHHHHHh-----C-CC---CCcEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALG-QLKFPYIY-PDPESRRLRAALAKDS-----G-LE---SDHILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~-~~~~~~~Y-~~~g~~~lr~~ia~~~-----g-~~---~~~i~~t~G~~~al~~~~~  164 (423)
                      ++++|+.+.++++ +|++++++. .+.....| |..|..++|+++++++     + +.   +++|++|+|+++++..++.
T Consensus       104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~  182 (533)
T 3f6t_A          104 DAVNYCHTELGLN-RDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFH  182 (533)
T ss_dssp             HHHHHHHHTTCCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHH
T ss_pred             hheeccCCCCCcC-CcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHH
Confidence            4688888888886 455554443 33322223 4567899999999987     2 22   3699999999999999999


Q ss_pred             H-----hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC----CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR----KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~----~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      +     ++++||+|+++.|+|..+...++..|++++.++.    ++++.+|++++++.+. +++++|++++|+||||.++
T Consensus       183 ~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-~~~k~v~l~~p~NPtG~~~  261 (533)
T 3f6t_A          183 SLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-PSIKALIVVNPTNPTSKEF  261 (533)
T ss_dssp             HHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-TTEEEEEEESSCTTTCBCC
T ss_pred             HhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-CCCeEEEEeCCCCCCcccc
Confidence            8     7899999999999999999888889999999986    3468899999999996 6899999999999999999


Q ss_pred             CHHHHHHHHc----C-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-----HHHHH
Q 014492          236 NDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----IIEYL  305 (423)
Q Consensus       236 ~~~~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-----~~~~l  305 (423)
                      +.+++++|++    . ++++|+||+|.++.++....... ..+++++++||||.+|++|+|+||++++++     +++.+
T Consensus       262 ~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l  340 (533)
T 3f6t_A          262 DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV-VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHL  340 (533)
T ss_dssp             CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH-SGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTS
T ss_pred             CHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc-CCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhc
Confidence            9997776655    5 99999999999988654333332 347899999999999999999999999765     33322


Q ss_pred             --------------------------------HHhcC--CCCCcHHHHHH----HHHHhC-------ChHHHHHHHHHHH
Q 014492          306 --------------------------------WRAKQ--PYNVSVAAEVA----ACAALQ-------NPIYLEKVKEALI  340 (423)
Q Consensus       306 --------------------------------~~~~~--~~~~~~~~~~a----~~~~l~-------~~~~~~~~~~~~~  340 (423)
                                                      .+...  ..+.+.+.|.+    +..+|.       ..+++++++++++
T Consensus       341 ~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~  420 (533)
T 3f6t_A          341 DKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVS  420 (533)
T ss_dssp             CHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHH
T ss_pred             chhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHH
Confidence                                            11111  24678888877    556664       2478899999999


Q ss_pred             HHHHHHHHHHccCCCCeecCCCceEEEEEeCC------C----------CCHHHHHHHHH-hCCcEEEeCCCC-CCCCeE
Q 014492          341 KERERLFKLLKDVPFLNPYPSYSNFILCEVTS------G----------MDAKKLKDDLA-KMGVMIRHYNNK-ELKGYV  402 (423)
Q Consensus       341 ~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~------~----------~~~~~l~~~L~-~~gI~v~~~~~~-~~~~~i  402 (423)
                      ++++.+.+.|. +++....|.+++|+|++++.      +          .+..++...|+ ++||.+.+++.+ ..++++
T Consensus       421 ~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~i  499 (533)
T 3f6t_A          421 ERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGEL  499 (533)
T ss_dssp             HHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEE
T ss_pred             HHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEE
Confidence            99999999997 76544567889999998863      1          35667776665 889999987763 336899


Q ss_pred             EEEecChhhHHHHHHHHhhh
Q 014492          403 RVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       403 Ris~~~~~~~~~l~~al~~l  422 (423)
                      ||+++..+ .+++.+++++|
T Consensus       500 Rls~a~~~-~e~i~~~i~~L  518 (533)
T 3f6t_A          500 RVSQANLP-TEDYALIGKQV  518 (533)
T ss_dssp             EEESSSSC-HHHHHHHHHHH
T ss_pred             EEEEeeCC-HHHHHHHHHHH
Confidence            99998532 24566655554

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=1.2e-37  Score=310.51  Aligned_cols=324  Identities=18%  Similarity=0.186  Sum_probs=248.5

Q ss_pred             CCee-EcCCCCCCCCCC--HHHHHHHhcC-CC-------C------CCCCC-cchHHHHHHHHHHh------CCCCCcEE
Q 014492           95 EDIV-KIDANENPYGPP--PEVREALGQL-KF-------P------YIYPD-PESRRLRAALAKDS------GLESDHIL  150 (423)
Q Consensus        95 ~~~i-~l~~~~~~~~~~--~~v~~al~~~-~~-------~------~~Y~~-~g~~~lr~~ia~~~------g~~~~~i~  150 (423)
                      +++| +|+.+.++..++  +.+.+++.+. ..       .      .+|++ .+.+++|+++++++      ++++++|+
T Consensus        31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~  110 (444)
T 3if2_A           31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIA  110 (444)
T ss_dssp             SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEE
T ss_pred             chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEE
Confidence            5679 999998877432  3455555542 22       1      45754 47899999999997      57889999


Q ss_pred             EeCCHHHHHHHHHHHhcCCCC--------------eEEEc-CCCchhhHHH------HHHCCCeEEEecCCC-----CCC
Q 014492          151 VGCGADELIDLIMRCVLDPGD--------------KIVDC-PPTFTMYEFD------AAVNGAAVVKVPRKS-----DFS  204 (423)
Q Consensus       151 ~t~G~~~al~~~~~~l~~~gd--------------~Vl~~-~p~y~~~~~~------~~~~g~~~~~v~~~~-----~~~  204 (423)
                      +|+|+++++++++++++++||              .|+++ .|+|..|...      ....|..++.++.+.     ++.
T Consensus       111 ~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  190 (444)
T 3if2_A          111 LTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYR  190 (444)
T ss_dssp             EESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEE
T ss_pred             EecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccC
Confidence            999999999999999999988              78775 9999988763      334688888888653     257


Q ss_pred             CCHHHHHHH---hhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc---C-CCEEEEccCCccccCCCchhh-hhccCCcEE
Q 014492          205 LNVELIADA---VEREKPKCIFLTSPNNPDGSIINDEDLLKILE---M-PILVVLDEAYTEFSGLESRME-WVKKHDNLI  276 (423)
Q Consensus       205 ~d~~~l~~~---i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~~~-~~~~~~~~i  276 (423)
                      +|+++|+++   +. +++++|++++||||||.+++.+++++|++   . |++||+||+|..+........ .....++++
T Consensus       191 ~d~~~l~~~l~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i  269 (444)
T 3if2_A          191 VDFEALENLPALKE-GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTI  269 (444)
T ss_dssp             CCHHHHHTCHHHHT-TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEE
T ss_pred             CCHHHHHHHHHhcC-CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEE
Confidence            999999998   44 68999999999999999999777777654   3 999999999986432111111 012357899


Q ss_pred             EEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHH---HH-HHHHHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL---EK-VKEALIKERERLFKLL  350 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~---~~-~~~~~~~~~~~l~~~L  350 (423)
                      ++.|+||. +++|+|+||+++++++++.+......  ++.+++.+.++..+++..++.   .+ .+++++++++.+.+.|
T Consensus       270 ~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (444)
T 3if2_A          270 LCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLL  348 (444)
T ss_dssp             EEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999996 78999999999999999988776543  677889999999999875543   33 5667888888888887


Q ss_pred             cc-CCC--Ce-ecCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCC--C--------CCCeEEEEecChhhHHHH
Q 014492          351 KD-VPF--LN-PYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNK--E--------LKGYVRVSVGKPEHTDAL  415 (423)
Q Consensus       351 ~~-~~~--~~-~~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~--~--------~~~~iRis~~~~~~~~~l  415 (423)
                      .+ ++.  +. ..|.+++|+|++++. +.+..++.+.|.++||.++++..+  +        ..+++||+++.  +.+++
T Consensus       349 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i  426 (444)
T 3if2_A          349 KQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTL  426 (444)
T ss_dssp             HHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHH
T ss_pred             HHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHH
Confidence            65 442  23 357789999999986 678999999999999999987653  1        13689999987  23667


Q ss_pred             HHHHhhh
Q 014492          416 MECLMHL  422 (423)
Q Consensus       416 ~~al~~l  422 (423)
                      .+++++|
T Consensus       427 ~~~l~~l  433 (444)
T 3if2_A          427 IDGIKVI  433 (444)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7766654

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=2.4e-36  Score=296.81  Aligned_cols=317  Identities=16%  Similarity=0.083  Sum_probs=247.6

Q ss_pred             CCCCeeEcCCCCC-CCCCCHHHHHHHhcC----CCC-CCCCC-cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANEN-PYGPPPEVREALGQL----KFP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~~-~~Y~~-~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      .+.++++|+.|++ ++++++.+.+++.+.    ... ..|+. .|    ..++++.+++++|.  +++++|+|+++++..
T Consensus        41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~  118 (398)
T 3a2b_A           41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG  118 (398)
T ss_dssp             TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred             CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence            3467899999987 666788888887652    111 22322 12    45678888888886  589999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCcCcCCCHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ++++++++||.|+++.|+|..+...++..|++++.+|.     +|++++++.+.+.   ++++|++++|+||||.+++.+
T Consensus       119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~  193 (398)
T 3a2b_A          119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLP  193 (398)
T ss_dssp             HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHH
T ss_pred             HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHH
Confidence            99999999999999999999999999999999999984     5899999998743   789999999999999999999


Q ss_pred             HHHHHHcC-CCEEEEccCCccccCCCc---hhhhhccCCc-EEEEccChhhhcccCccccccccCHHHHHHHHHhcC---
Q 014492          239 DLLKILEM-PILVVLDEAYTEFSGLES---RMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---  310 (423)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~~~~-~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---  310 (423)
                      ++.++|+. |+++|+||+|..+.++..   .....+..++ +++++|+||.++++|   ||+++++++++.+.....   
T Consensus       194 ~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~  270 (398)
T 3a2b_A          194 ELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVM  270 (398)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccce
Confidence            99999998 999999999998765321   1122222234 599999999999778   999999999988876421   


Q ss_pred             CCCCcHHHH-HHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          311 PYNVSVAAE-VAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       311 ~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                      ..+.+.+.+ .++..+|+..+++++.+++++++++++.+.|++++ +.+.++.++|+|+.++++.+..++.+.|.++||.
T Consensus       271 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~  349 (398)
T 3a2b_A          271 FSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHG-FDLGATESPILPIFIRSNEKTFWVTKMLQDDGVF  349 (398)
T ss_dssp             SSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHTT-CCBCSCCSSEEEEECCCHHHHHHHHHHHHHTTEE
T ss_pred             ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhcC-CCcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCcE
Confidence            122333444 45667776655567888999999999999999884 4545566899999997555678899999988999


Q ss_pred             EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHh
Q 014492          390 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       390 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      ++++..+.   .++++||+++   +.++++++.++|+
T Consensus       350 v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~  386 (398)
T 3a2b_A          350 VNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMV  386 (398)
T ss_dssp             CEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             EEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHH
Confidence            99887542   3689999998   4555555555554

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=2.7e-36  Score=295.04  Aligned_cols=318  Identities=15%  Similarity=0.111  Sum_probs=251.3

Q ss_pred             CCCCeeEcCCCCC-CCCCCHHHHHHHhcC----CC---CCCCCC---cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANEN-PYGPPPEVREALGQL----KF---PYIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~---~~~Y~~---~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ++.+++||+.+++ ++++++++.+++.+.    ..   ...|+.   .+..++|+++++++|++ +.|++++| ++++..
T Consensus        37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-t~a~~~  114 (384)
T 1bs0_A           37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYS-RALLFISG-FAANQA  114 (384)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHH
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-cEEEeCCc-HHHHHH
Confidence            3567899999886 556788988888652    11   123432   45789999999999985 56666666 789999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      +++.++++||.|+++.|+|..+...++..|++++.+|.     .|++++++.+++.  +++++++++|+||||.+++.++
T Consensus       115 ~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~  189 (384)
T 1bs0_A          115 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE  189 (384)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred             HHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHH
Confidence            99999999999999999999999999999999999983     5799999998743  3788888999999999999999


Q ss_pred             HHHHHcC-CCEEEEccCCccccCC---CchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----  311 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----  311 (423)
                      +.++|+. |+++|+||+|..+..+   .......+. +..++++|+||.+|++|   ||+++++++++.+......    
T Consensus       190 i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~  265 (384)
T 1bs0_A          190 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYS  265 (384)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred             HHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCHHHHHHHHHhchhhhcC
Confidence            9999987 9999999999876532   111222222 23489999999999777   9999999999888764322    


Q ss_pred             CCCcHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          312 YNVSVAAEVAACAALQNPI--YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                      .+.+++.+.++.++++..+  +.++.+++++++++++.+.|++++ +.+.++.++|+|++++++.+..++.+.|.++||.
T Consensus       266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~  344 (384)
T 1bs0_A          266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-FTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCW  344 (384)
T ss_dssp             BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-CEECSCCSSBCCEEEESHHHHHHHHHHHHHTTEE
T ss_pred             CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCEEEEEeCCHHHHHHHHHHHHHCCcE
Confidence            2578888888888887644  778889999999999999999885 5666677888899887555678899999989999


Q ss_pred             EEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          390 IRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ++++..+.   ..+++||+++   +.++++++.++|+++
T Consensus       345 v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          345 VTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             CCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            99876532   3479999998   566666666666654

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=1.7e-36  Score=296.61  Aligned_cols=317  Identities=15%  Similarity=0.115  Sum_probs=248.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CC----C-C---CCCC--cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KF----P-Y---IYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~----~-~---~Y~~--~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +.++|+.+.. .+.++.+.+++.+. ..    + .   .|++  .+..++|+++++++|+++++|++|+|+++++..+++
T Consensus        16 ~~i~l~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~   94 (390)
T 1elu_A           16 NKTYFNFGGQ-GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLW   94 (390)
T ss_dssp             TSEECCTTTC-CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHH
T ss_pred             CeEEecCCcc-CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHh
Confidence            4689988763 34567888888652 11    1 1   4655  567899999999999988899999999999999999


Q ss_pred             Hh-cCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          165 CV-LDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       165 ~l-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      ++ +++||+|+++.|+|..+...    ++..|++++.+|.+  +++.+|++++++.+. .++++|++++|+||||.+++.
T Consensus        95 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~  173 (390)
T 1elu_A           95 GLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPL  173 (390)
T ss_dssp             HSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCH
T ss_pred             CCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC-CCceEEEEeccccCCceecCH
Confidence            98 89999999999999986643    56679999999975  577899999999997 689999999999999999999


Q ss_pred             HHHHHHHc----C-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh----
Q 014492          238 EDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA----  308 (423)
Q Consensus       238 ~~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~----  308 (423)
                      +++.++|+    . |+++|+||+|.....   .. .+...+.++++.|+||.+ .+|.++||+++++++++.+...    
T Consensus       174 ~~i~~l~~~~~~~~~~~li~Dea~~~g~~---~~-~~~~~~~d~~~~s~~K~~-~~~~g~G~~~~~~~~~~~~~~~~~g~  248 (390)
T 1elu_A          174 AEIMAVCRRHQGNYPVRVLVDGAQSAGSL---PL-DFSRLEVDYYAFTGHKWF-AGPAGVGGLYIHGDCLGEINPTYVGW  248 (390)
T ss_dssp             HHHHHHHHHCCSSSCCEEEEECTTTBTTB---CC-CTTTSCCSEEEEESSSTT-CCCTTCEEEEECTTTGGGCCCCSCCT
T ss_pred             HHHHHHHhhhhhhcCcEEEEEcccccCCc---CC-ChhhcCCCEEEccccccc-cCCCceEEEEECHHhHhhcCCccccC
Confidence            99999999    7 999999999984321   11 122345568999999933 3567799999998887765431    


Q ss_pred             --------------------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CCC
Q 014492          309 --------------------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY---PSY  362 (423)
Q Consensus       309 --------------------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~~  362 (423)
                                          ...++.+...+.++..+++.   .+++++.+++++++++++.+.|++++++.+.   ++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  328 (390)
T 1elu_A          249 RSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQ  328 (390)
T ss_dssp             TTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCS
T ss_pred             CcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCcccc
Confidence                                12345676777666665543   3457889999999999999999988555554   456


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          363 SNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      ++|++++++++.+..++.+.|.++||.++++.   .++++||++   .+.++++++.++|+++
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          329 AGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF  388 (390)
T ss_dssp             SSEEEEEECSSSCHHHHHHHHHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             ccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence            77887899767788999999999999999876   358999998   4566666666666554

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=1.1e-35  Score=291.49  Aligned_cols=311  Identities=16%  Similarity=0.146  Sum_probs=250.3

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc---chHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          104 ENPYGPPPEVREALGQLKFPYIYPDP---ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Y~~~---g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      .++.+.++++.+++.+... ..|+..   ...++++.+++++|++++ +|++|+|+++++..++.+++++||+|+++.|+
T Consensus        40 ~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~  118 (393)
T 1vjo_A           40 PGPSNAHPSVLQAMNVSPV-GHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAG  118 (393)
T ss_dssp             SSCCCCCHHHHHHHSSCCC-CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CCCCCCCHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCC
Confidence            4566778999999987433 245432   245788888888999888 99999999999999999999999999999999


Q ss_pred             chh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492          180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (423)
Q Consensus       180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay  256 (423)
                      |..  +...++..|++++.+|.+.++.+|++++++.+.+.++++|++++|+||||.+++.+++.++|+. |+++|+||+|
T Consensus       119 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~  198 (393)
T 1vjo_A          119 YFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVT  198 (393)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTT
T ss_pred             hhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCc
Confidence            998  8888899999999999877778999999999973278999999999999999999999999998 9999999999


Q ss_pred             ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------------------cCCC-CC
Q 014492          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------------------KQPY-NV  314 (423)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------------------~~~~-~~  314 (423)
                      . +...+  . .+...+.++++.|+||.++.+| |+||+++++++++.+...                     ...+ +.
T Consensus       199 ~-~g~~~--~-~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  273 (393)
T 1vjo_A          199 S-LGGVP--I-FLDAWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTA  273 (393)
T ss_dssp             T-TTTSC--C-CTTTTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCC
T ss_pred             c-ccCcC--C-cccccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCC
Confidence            9 32211  1 1223456799999999998777 999999999998887532                     1223 67


Q ss_pred             cHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHHhC-C
Q 014492          315 SVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM-G  387 (423)
Q Consensus       315 ~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~~~-g  387 (423)
                      +.+.+.++..+++..  +++++.+++++++++++.+.|++++ +.+.++.    ++++++.++.+.+..++.+.|.++ |
T Consensus       274 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  352 (393)
T 1vjo_A          274 PINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHN  352 (393)
T ss_dssp             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCC
Confidence            888999888888762  3477889999999999999998874 4443333    367888887677899999999976 9


Q ss_pred             cEEEeCCCCCCCCeEEEEe-c--Chh-hHHHHHHHHhh
Q 014492          388 VMIRHYNNKELKGYVRVSV-G--KPE-HTDALMECLMH  421 (423)
Q Consensus       388 I~v~~~~~~~~~~~iRis~-~--~~~-~~~~l~~al~~  421 (423)
                      |.++++..+..++++||++ +  ..+ +.+++.++|++
T Consensus       353 i~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~  390 (393)
T 1vjo_A          353 IEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQ  390 (393)
T ss_dssp             EECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             EEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHH
Confidence            9999987655678999994 3  333 35566666554

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=3.2e-35  Score=287.07  Aligned_cols=316  Identities=16%  Similarity=0.133  Sum_probs=251.6

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           98 VKIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~---~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      +.++. ..+...++++.+++.+... ..|+.   .-..++++.+++++|++ ++++++|+|+++++..++.+++++||+|
T Consensus        21 ~~l~~-~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~v   98 (386)
T 2dr1_A           21 YKLFT-AGPVACFPEVLEIMKVQMF-SHRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKV   98 (386)
T ss_dssp             SEECC-SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEE
T ss_pred             ceeec-CCCcCCcHHHHHHHhcccc-cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeE
Confidence            34443 3345667899999987433 24532   23567888888899987 6789999999999999999999999999


Q ss_pred             EEcCCCchh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCE
Q 014492          174 VDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (423)
Q Consensus       174 l~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~  249 (423)
                      +++.|+|..  +...++..|++++.++.+.++.+|++++++.+++ .++++|++++|+||||.+.+.+++.++|+. |++
T Consensus        99 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~  178 (386)
T 2dr1_A           99 LVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKL  178 (386)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCE
T ss_pred             EEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCe
Confidence            999999987  8888889999999999877778999999999953 589999999999999999999999999987 999


Q ss_pred             EEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHH----------------H----hc
Q 014492          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW----------------R----AK  309 (423)
Q Consensus       250 li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~----------------~----~~  309 (423)
                      +|+||+|..+.....    +...+.++++.|+||.++.++ ++||+++++++++.+.                .    ..
T Consensus       179 li~D~a~~~~~~~~~----~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (386)
T 2dr1_A          179 VFVDAVSAMGGADIK----FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKES  253 (386)
T ss_dssp             EEEECTTTBTTBCCC----TTTTTCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSS
T ss_pred             EEEEccccccCcccc----ccccCCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCC
Confidence            999999997653211    223456799999999998652 4899999999887662                1    13


Q ss_pred             CCCCCcHHHHHHHHHHhCCh-H--HHHHHHHHHHHHHHHHHHHHccCCCCeecCC----CceEEEEEeCCCCCHHHHHHH
Q 014492          310 QPYNVSVAAEVAACAALQNP-I--YLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLKDD  382 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~~-~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~~~~~~~~~~~~~~~l~~~  382 (423)
                      ..++.+.+.+.++..+|+.. +  ++++.+++++++++++.+.|++++ +.+.++    .++++|++++.+.+..++.+.
T Consensus       254 ~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (386)
T 2dr1_A          254 TPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPGIKGDEVYEA  332 (386)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTTCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCCCCHHHHHHH
Confidence            34678888998888888652 2  367889999999999999999874 444333    478899999877789999999


Q ss_pred             HHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          383 LAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       383 L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      |.++||.++++..+..++++||+++   +.++++++.++|++
T Consensus       333 l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  374 (386)
T 2dr1_A          333 MRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLRE  374 (386)
T ss_dssp             HHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             HHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            9988999999875445689999998   55555666555543

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=2.5e-35  Score=291.15  Aligned_cols=319  Identities=19%  Similarity=0.203  Sum_probs=250.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC--------CCCCCC---cchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF--------PYIYPD---PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~--------~~~Y~~---~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~  161 (423)
                      +++++|+.++++ +.++.+.+++.+. ..        .+.|+.   .+..++|+++++++|. ++++|++|+|+++++..
T Consensus        27 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~  105 (420)
T 1t3i_A           27 HPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINL  105 (420)
T ss_dssp             EECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHH
Confidence            357999999988 6778898888752 11        123442   4578899999999998 78899999999999999


Q ss_pred             HHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      ++.++    +++||+|+++.|+|+.    +...++..|++++.+|.++++.+|++++++++. .++++|++++|+||||.
T Consensus       106 ~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~  184 (420)
T 1t3i_A          106 VAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLGC  184 (420)
T ss_dssp             HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTCB
T ss_pred             HHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhC-CCceEEEEeCCcccccC
Confidence            99999    8999999999999987    566777889999999987778899999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-  311 (423)
                      +++.+++.++|+. |+++|+||+|..+..... ..   ..+.++++.|+||.+|.+|  +||+++++++++.+...... 
T Consensus       185 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~---~~~~di~~~s~sK~~~~~g--~G~~~~~~~~~~~~~~~~~~~  258 (420)
T 1t3i_A          185 VNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD-VQ---LIDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFFGGG  258 (420)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HH---HHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCSCST
T ss_pred             cCCHHHHHHHHHHcCCEEEEEhhhccCCccCc-hh---hcCCCEEEEehhhhcCCCc--eEEEEEchHHHhhcCceecCC
Confidence            9999999999987 999999999986543211 11   2245689999999888777  89999999988877654321 


Q ss_pred             ---------------------CCCcHHHHHHHHH-HhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC-----
Q 014492          312 ---------------------YNVSVAAEVAACA-ALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY-PS-----  361 (423)
Q Consensus       312 ---------------------~~~~~~~~~a~~~-~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~-----  361 (423)
                                           .+.+.+.+.++.. +++..  .++++.+++++++++++.+.|++++++.+. +.     
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~  338 (420)
T 1t3i_A          259 EMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGD  338 (420)
T ss_dssp             TSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSC
T ss_pred             CccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccc
Confidence                                 1244455544333 44331  236788889999999999999988656543 32     


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .++++++.++ +.+..++.+.|.++||.++++..        .+.++++||+++   +.++++++.++|+++
T Consensus       339 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~  409 (420)
T 1t3i_A          339 RAALASFNVA-GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT  409 (420)
T ss_dssp             BCSEEEEEET-TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEEEC-CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence            3777777887 46788899999999999998743        123689999998   566677777777653

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=3e-35  Score=286.91  Aligned_cols=314  Identities=20%  Similarity=0.217  Sum_probs=242.0

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-CCCC-------C--C-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           98 VKIDANENPYGPPPEVREALGQL-KFPY-------I--Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~~~-------~--Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      +.|+.+.+. ++++++.+++.+. ...+       .  | +..+..++++++++++|+++++|++|+|+++++..+++++
T Consensus         3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~   81 (384)
T 1eg5_A            3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV   81 (384)
T ss_dssp             EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred             EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhh
Confidence            677777776 6788999888763 2111       0  1 1123578999999999998899999999999999999998


Q ss_pred             c----CCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          167 L----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      +    ++||+|+++.|+|+.+...+   +..|++++.+|.+.++.+|++++++.+. .++++|++++|+||||.+++.++
T Consensus        82 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~  160 (384)
T 1eg5_A           82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED  160 (384)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred             hhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC-CCCeEEEEECCCCCcccccCHHH
Confidence            7    79999999999998776655   6789999999987778899999999997 58999999999999999999999


Q ss_pred             HHHHHcC-C--CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH--HHHHHHh-----c
Q 014492          240 LLKILEM-P--ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI--IEYLWRA-----K  309 (423)
Q Consensus       240 l~~i~~~-~--~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~--~~~l~~~-----~  309 (423)
                      +.++|+. |  ++||+||+|. +...+  . .+...+.++++.|+||.+|++|  +||+++++++  ...+...     .
T Consensus       161 i~~l~~~~~~~~~li~Dea~~-~~~~~--~-~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~  234 (384)
T 1eg5_A          161 VTRIVKKKNKETLVHVDAVQT-IGKIP--F-SLEKLEVDYASFSAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGL  234 (384)
T ss_dssp             HHHHHHHHCTTCEEEEECTTT-TTTSC--C-CCTTTCCSEEEEEGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTT
T ss_pred             HHHHHHhcCCceEEEEEhhhh-cCCcc--c-CchhcCCCEEEecHHHhcCCCc--eEEEEEcCCCccccccccCcccccc
Confidence            9999987 8  9999999998 22111  1 1222356789999999998888  7999998875  2222111     1


Q ss_pred             CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC---CceEEEEEeCCCCCHHHHHHHHH
Q 014492          310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS---YSNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~---~~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      ..++.+.+.+.++..+|+. .+++++.+++++++++++.+.|++.+ +.+. +.   .+.++++.++ +.+..++.+.|.
T Consensus       235 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  312 (384)
T 1eg5_A          235 RSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFP-NIRGSTLQNLLS  312 (384)
T ss_dssp             BCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECT-TCCHHHHHHHHH
T ss_pred             cCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeC-CCCHHHHHHHHh
Confidence            2357888899888888876 45678899999999999999998843 4443 22   2457778777 467889999999


Q ss_pred             hCCcEEEeCCCCC-------------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          385 KMGVMIRHYNNKE-------------------LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       385 ~~gI~v~~~~~~~-------------------~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++||.++++..+.                   ..+++||+++   +.++++++.++|++
T Consensus       313 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  371 (384)
T 1eg5_A          313 GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEE  371 (384)
T ss_dssp             HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence            9999999865321                   1379999998   56666666666654

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=3.9e-35  Score=287.71  Aligned_cols=316  Identities=16%  Similarity=0.156  Sum_probs=247.1

Q ss_pred             cCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEEEc
Q 014492          100 IDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDC  176 (423)
Q Consensus       100 l~~~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~  176 (423)
                      +..++++.+.++++.+++.+....+.++.  ....++|+++++++|.+++ +|++|+|+++++..++.+++++||+|+++
T Consensus        20 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~   99 (396)
T 2ch1_A           20 IMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIA   99 (396)
T ss_dssp             BCCSSSSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             eeecCCCCCCCHHHHHHhccccccCCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEE
Confidence            34567788889999999987433222232  2378899999999999888 89999999999999999999999999999


Q ss_pred             CCCchhhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEc
Q 014492          177 PPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD  253 (423)
Q Consensus       177 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~D  253 (423)
                      .|+|..+.  ..++..|++++.++.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++|+|
T Consensus       100 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D  179 (396)
T 2ch1_A          100 VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVD  179 (396)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEE
T ss_pred             cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE
Confidence            99999885  46788999999999877788999999999974379999999999999999999999999987 9999999


Q ss_pred             cCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------------------------
Q 014492          254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------------------------  308 (423)
Q Consensus       254 eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------------------------  308 (423)
                      |+|.... .+  . .+...+..+++.|++|.++ ++.++|++++++++++.+...                         
T Consensus       180 ea~~~g~-~~--~-~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (396)
T 2ch1_A          180 AVASLCG-VP--F-YMDKWEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPK  254 (396)
T ss_dssp             CTTTBTT-BC--C-CTTTTTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCC
T ss_pred             ccccccC-Cc--c-chhhcCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccC
Confidence            9998321 11  1 1222333577789999765 344569999999888877531                         


Q ss_pred             cCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc-----eEEEEEeCCCCCHHHHHH
Q 014492          309 KQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS-----NFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       309 ~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~-----~~~~~~~~~~~~~~~l~~  381 (423)
                      ...++.+..++.++.++++..  +++++.+++++++++++.+.|++++ +.+.++.+     .+++++++++.+..++.+
T Consensus       255 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (396)
T 2ch1_A          255 RYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMG-LDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQ  333 (396)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCBSSCSGGGBCTTEEEEECCTTCCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CeeccCCccccCCceEEEEcCCCCCHHHHHH
Confidence            112457788888888888652  4577889999999999999998874 44444333     488999976778999999


Q ss_pred             HHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492          382 DLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  421 (423)
Q Consensus       382 ~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  421 (423)
                      .|.+ +||.++++..+..++++||++ +   +.++++++.++|++
T Consensus       334 ~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~  378 (396)
T 2ch1_A          334 YAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKE  378 (396)
T ss_dssp             HHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHH
Confidence            9985 599999876544578999998 4   45566676666654

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=8.8e-35  Score=285.77  Aligned_cols=319  Identities=17%  Similarity=0.172  Sum_probs=248.9

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-C---CCCC-------CCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-F---PYIY-------PDPESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~---~~~Y-------~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~  161 (423)
                      .++++|+.+.++ +.++++.+++.+. . .   .+.|       +..+..++|+++++++|. ++++|++|+|+++++..
T Consensus        22 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~  100 (406)
T 1kmj_A           22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL  100 (406)
T ss_dssp             EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHH
Confidence            357999999887 5678888888652 1 1   1211       233567899999999998 67899999999999999


Q ss_pred             HHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      ++.++    +++||+|+++.|+|+.    +...++..|++++.+|.++++.+|++++++.+. .++++|++++|+||||.
T Consensus       101 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~  179 (406)
T 1kmj_A          101 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT  179 (406)
T ss_dssp             HHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred             HHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhc-cCCeEEEEeCCCccccC
Confidence            99999    8999999999999864    445567789999999987778899999999997 68999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-  311 (423)
                      +++.+++.++|+. |+++|+||+|..+.....    +...+.++++.|+||.+|++|  +||+++++++++.+...... 
T Consensus       180 ~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~----~~~~~~d~~~~s~~K~~g~~G--~G~~~~~~~~~~~~~~~~~~~  253 (406)
T 1kmj_A          180 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD----VQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG  253 (406)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHCCCSSCST
T ss_pred             cCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc----ccccCCCEEEEEchhccCCCC--cEEEEEeHHHHhhcCCcccCC
Confidence            9999999999987 999999999986542111    122346689999999998888  89999999988877543311 


Q ss_pred             ----------------------CCCcHHHHHHHH-HHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--Cce
Q 014492          312 ----------------------YNVSVAAEVAAC-AALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSN  364 (423)
Q Consensus       312 ----------------------~~~~~~~~~a~~-~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~  364 (423)
                                            .+.+.+.+.++. .+++..  .++++.+++++++++++.+.|++++++.+.++  .++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  333 (406)
T 1kmj_A          254 SMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG  333 (406)
T ss_dssp             TSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCS
T ss_pred             CceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCC
Confidence                                  123444444433 455432  25678888999999999999999865665444  577


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      |+++.++ +.+..++.+.|.++||.++++..        .+.++++||+++   +.++++++.++|+++
T Consensus       334 ~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~  401 (406)
T 1kmj_A          334 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI  401 (406)
T ss_dssp             EEEEEET-TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEEC-CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHH
Confidence            7777886 56788899999999999998763        233689999998   666777787777653

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=4.2e-35  Score=288.19  Aligned_cols=317  Identities=17%  Similarity=0.198  Sum_probs=247.9

Q ss_pred             CCCCeeEcCCCCCCCC--CCHHHHHHHhcC-C-CC-----CCCC---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           93 KPEDIVKIDANENPYG--PPPEVREALGQL-K-FP-----YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~~-~-~~-----~~Y~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ++.++|||+.+ ++++  ++|++.+++.+. . ++     +.|+   ..+..++|+++++++|++ ++|++++| ++++.
T Consensus        43 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-s~a~~  119 (401)
T 1fc4_A           43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME-DAILYSSC-FDANG  119 (401)
T ss_dssp             TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHH
T ss_pred             CCccEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC-cEEEeCCh-HHHHH
Confidence            45678999998 5676  489998888762 1 11     1232   345789999999999987 67777666 56888


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCC
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~  235 (423)
                      .++++++++||.|+++.|+|..+...++..|++++.++     ..|++++++.+++.     ++++|++++|+||||.++
T Consensus       120 ~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~  194 (401)
T 1fc4_A          120 GLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIA  194 (401)
T ss_dssp             TTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEEC-----TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEEC
T ss_pred             HHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEEC-----CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCC
Confidence            89999999999999999999888888888999999998     35789999888631     789999999999999999


Q ss_pred             CHHHHHHHHcC-CCEEEEccCCc-cccC-CCch-hhhhc-cCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhc
Q 014492          236 NDEDLLKILEM-PILVVLDEAYT-EFSG-LESR-MEWVK-KHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK  309 (423)
Q Consensus       236 ~~~~l~~i~~~-~~~li~Deay~-~~~~-~~~~-~~~~~-~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~  309 (423)
                      +.+++.++|+. |+++|+||+|+ ++.+ .+.. ....+ ..+.+++++|+||.+ |.+|   ||+++++++++.+....
T Consensus       195 ~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~~~~~~~l~~~~  271 (401)
T 1fc4_A          195 NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAARKEVVEWLRQRS  271 (401)
T ss_dssp             CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEECHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcCHHHHHHHHHhC
Confidence            99999999987 99999999995 7653 2222 21122 124569999999998 5555   99999999999887654


Q ss_pred             C----CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHh
Q 014492          310 Q----PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAK  385 (423)
Q Consensus       310 ~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~  385 (423)
                      .    .++.+.+.+.++.++|+..+..++.+++++++++++.+.|++++ +.+.++.++|+|++++++.+..++.+.|.+
T Consensus       272 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  350 (401)
T 1fc4_A          272 RPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG-FTLAGADHAIIPVMLGDAVVAQKFARELQK  350 (401)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT-CCBCCSSSSEEEEEEECHHHHHHHHHHHHH
T ss_pred             cCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCEEEEEcCChHHHHHHHHHHHH
Confidence            2    34788999999888886533346788899999999999999885 455578899999999754567889999999


Q ss_pred             CCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          386 MGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       386 ~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +||.++++..+.   ..+++||+++   +.++++++.++|++
T Consensus       351 ~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  392 (401)
T 1fc4_A          351 EGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTR  392 (401)
T ss_dssp             TTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            999999876532   3468999998   56666666666554

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=8.5e-35  Score=280.52  Aligned_cols=307  Identities=15%  Similarity=0.128  Sum_probs=239.6

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      .++.++++++.+++.+....+.|+..  ...++|+++++++|+++++|++|+|+++++..++++++++||+|+++.|+|+
T Consensus         7 ~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~   86 (352)
T 1iug_A            7 PGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKF   86 (352)
T ss_dssp             SSSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHH
T ss_pred             CCCCCCCHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCch
Confidence            45677889999999874332344432  4678999999999998889999999999999999999999999999999998


Q ss_pred             hhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCC
Q 014492          182 MYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAY  256 (423)
Q Consensus       182 ~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay  256 (423)
                      .+.  ..++..|++++.+|.+.++.+|++++++    +++++|++++|+||||.+++.+++.++|+.   |+++|+||+|
T Consensus        87 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~  162 (352)
T 1iug_A           87 SERFYEIALEAGLVVERLDYPYGDTPRPEDVAK----EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVT  162 (352)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC----SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred             hHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc----cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCc
Confidence            865  4456689999999987777789888876    478999999999999999999999999974   8999999999


Q ss_pred             ccccCCCchhhhhccCCcEEEEccChhh-hcccCccccccccCHHHHHH---------HH-------HhcCCCCCcHHHH
Q 014492          257 TEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEY---------LW-------RAKQPYNVSVAAE  319 (423)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~-~g~~G~R~G~i~~~~~~~~~---------l~-------~~~~~~~~~~~~~  319 (423)
                      ..... +  .. +...+..+++.|+||. +|.+|  +||++++++.++.         +.       .....++.+...+
T Consensus       163 ~~~~~-~--~~-~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (352)
T 1iug_A          163 SLLVG-E--VA-LEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLV  236 (352)
T ss_dssp             TBTTB-C--CC-SGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHH
T ss_pred             cccCc-c--ee-ccccCeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHH
Confidence            73221 1  11 1122455889999995 44334  7999999987654         22       1122356778888


Q ss_pred             HHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014492          320 VAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK  396 (423)
Q Consensus       320 ~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~  396 (423)
                      .++.++++. .+++++.+++++++++++.+.|+++ ++.+.++  .++++|++++++.+..++.+.|.++||.++++..+
T Consensus       237 ~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~  315 (352)
T 1iug_A          237 LAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGP  315 (352)
T ss_dssp             HHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCc
Confidence            777777764 2347888999999999999999987 4555443  67899999986778999999999899999988744


Q ss_pred             CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          397 ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       397 ~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ..++++||+++   +.++++++.++|++
T Consensus       316 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~  343 (352)
T 1iug_A          316 LKGKVFRLSLMGAYDRYEALGVAGMFRE  343 (352)
T ss_dssp             GTTTEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEccccCCHHHHHHHHHHHHH
Confidence            45689999998   45666666666654

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=1.8e-35  Score=290.31  Aligned_cols=317  Identities=16%  Similarity=0.168  Sum_probs=246.2

Q ss_pred             CCCeeEcCCCCCCC--CCCHHHHHHHhcC----CC---CCCCC--C-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           94 PEDIVKIDANENPY--GPPPEVREALGQL----KF---PYIYP--D-PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        94 ~~~~i~l~~~~~~~--~~~~~v~~al~~~----~~---~~~Y~--~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.++|||+.+ +++  .++|++.+++.+.    ..   ..+|+  . ....++++++++++|.+ ++|++++| ++++..
T Consensus        42 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~  118 (399)
T 3tqx_A           42 EKEVLNFCAN-NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-DTILYSSC-FDANGG  118 (399)
T ss_dssp             TEEEEECSSC-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-EEEEESCH-HHHHHT
T ss_pred             CeeEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-cEEEECch-HHHHHH
Confidence            4678999998 444  4578888877652    11   12222  2 24689999999999975 57777666 679999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++.+++++||.|+++.|+|..+...++..|++++.+|.     .|++++++.+++.     ++++|++++|+||||.+++
T Consensus       119 ~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~  193 (399)
T 3tqx_A          119 LFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD  193 (399)
T ss_dssp             THHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC
T ss_pred             HHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC
Confidence            99999999999999999999999999999999999984     4667888877631     7999999999999999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCC---chhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      .+++.++|+. |+++|+||+|.....+.   ......+ ..+.+++++|+||.++  |++.||+++++++++.+......
T Consensus       194 l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~~~~~~~~~~~~~~  271 (399)
T 3tqx_A          194 LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGHKEIIEWLRNRSRP  271 (399)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEECHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcCHHHHHHHHHhCcc
Confidence            9999999987 99999999996332221   1122222 1355699999999987  44559999999999988775432


Q ss_pred             ----CCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhC
Q 014492          312 ----YNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKM  386 (423)
Q Consensus       312 ----~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~  386 (423)
                          .+.+...+.++..+++.. ++.++.+++++++++++.+.|++++ +.+.++.++|+|+.+++..+..++.+.|.++
T Consensus       272 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  350 (399)
T 3tqx_A          272 YLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLG-FQLVPGNHPIIPVMLGDAQLATNMADHLLQE  350 (399)
T ss_dssp             HHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSEEEEEEECHHHHHHHHHHHHHT
T ss_pred             eeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-CCcCCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence                367888888888888765 6678999999999999999999885 4445788899999997655778999999999


Q ss_pred             CcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          387 GVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       387 gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ||.++++..   ...++++||+++   +.++++++.++|++
T Consensus       351 gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  391 (399)
T 3tqx_A          351 GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQ  391 (399)
T ss_dssp             TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHH
Confidence            999997654   234579999997   55555555555543

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=3e-34  Score=281.02  Aligned_cols=317  Identities=14%  Similarity=0.105  Sum_probs=244.6

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      .+.|+.+ ++.++++.+.+++.+....+.|+.  ....++|+++++++|+++++|++|+|+++++..++++++++||+|+
T Consensus         9 ~~yl~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl   87 (392)
T 2z9v_A            9 PVITLTA-GPVNAYPEVLRGLGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVL   87 (392)
T ss_dssp             CSEECSS-SCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEE
T ss_pred             cceeecC-CCcCCCHHHHHHHhccccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEE
Confidence            3667665 356778999999987433233332  2467899999999999889999999999999999999999999999


Q ss_pred             EcCCCchhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492          175 DCPPTFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (423)
Q Consensus       175 ~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l  250 (423)
                      ++.|+|+.+  ...++..|++++.+|.+.++.+|++++++.+++ .++++|++++|+||||.+++.+++.++|+. |+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l  167 (392)
T 2z9v_A           88 NLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYL  167 (392)
T ss_dssp             EEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEE
T ss_pred             EecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeE
Confidence            999999865  344455799999999877777999999999953 579999999999999999999999999987 9999


Q ss_pred             EEccCCccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhc--------------------
Q 014492          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAK--------------------  309 (423)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~--------------------  309 (423)
                      |+||+|..... +  .. +...+..+++.|+||.+ |.+|  +||+++++++++.+....                    
T Consensus       168 i~D~a~~~g~~-~--~~-~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~  241 (392)
T 2z9v_A          168 IVDAVSSFGGM-K--TH-PEDCKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRD  241 (392)
T ss_dssp             EEECTTTBTTB-S--CC-GGGGTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTT
T ss_pred             EEEcccccCCc-c--cc-cccccceEEEecCcccccCCCc--eeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhccc
Confidence            99999984221 1  11 12234558899999954 4455  599999999988876421                    


Q ss_pred             --CCCCCcHHHHHHHHHHhCC-hHH-HHHHHHHHHHHHHHHHHHHccCCCCeecC-C----CceEEEEEeCCCCCHHHHH
Q 014492          310 --QPYNVSVAAEVAACAALQN-PIY-LEKVKEALIKERERLFKLLKDVPFLNPYP-S----YSNFILCEVTSGMDAKKLK  380 (423)
Q Consensus       310 --~~~~~~~~~~~a~~~~l~~-~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~----~~~~~~~~~~~~~~~~~l~  380 (423)
                        ..++.+...+.++..+++. .++ +++.+++++++++++.+.|++++ +.+.+ .    .+++++++++++.+..++.
T Consensus       242 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  320 (392)
T 2z9v_A          242 KPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTAVRTPDGVDEKALR  320 (392)
T ss_dssp             SCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEEEECCTTCCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEEEECCCCCCHHHHH
Confidence              1234566777766667654 233 67888999999999999998874 44433 3    4678899997677889999


Q ss_pred             HHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492          381 DDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  421 (423)
Q Consensus       381 ~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  421 (423)
                      +.|.++ ||.++++..+..++++||++ +   +.++++++.++|++
T Consensus       321 ~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~  366 (392)
T 2z9v_A          321 QAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGG  366 (392)
T ss_dssp             HHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHH
Confidence            999976 99999887545578999994 5   55566666665553

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=3.2e-34  Score=277.70  Aligned_cols=315  Identities=10%  Similarity=0.033  Sum_probs=245.6

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcCCCC
Q 014492           97 IVKIDANENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGD  171 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~---~g~~~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~~gd  171 (423)
                      +++|+.|  +++++|++.+++.+. ..+.|+.   .+..++|+++++++|.+  ++++++|+|+++++..++++++++||
T Consensus         5 ~~~~~~g--p~~~~~~v~~a~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd   81 (366)
T 1m32_A            5 YLLLTPG--PLTTSRTVKEAMLFD-SCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQD   81 (366)
T ss_dssp             CEECSSS--SCCCCHHHHHTTCCC-CCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTC
T ss_pred             cccccCC--CcCCCHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCC
Confidence            5788777  567889999999874 2244543   56789999999999932  24799999999999999999999999


Q ss_pred             eEEEcC-CCchh-hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C
Q 014492          172 KIVDCP-PTFTM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM-P  247 (423)
Q Consensus       172 ~Vl~~~-p~y~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~  247 (423)
                      +|++.+ ++|+. +...++..|++++.+|.+.++.+|++++++.+++. ++++|++++|+||||.+++.+++.++|+. |
T Consensus        82 ~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~  161 (366)
T 1m32_A           82 KVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYG  161 (366)
T ss_dssp             CEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHT
T ss_pred             eEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcC
Confidence            987765 66654 66677788999999998777789999999999753 68999999999999999999999999998 9


Q ss_pred             CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc------------------
Q 014492          248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------------------  309 (423)
Q Consensus       248 ~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~------------------  309 (423)
                      +++|+||+|..+.....    +...+.++++.|+||.++ .+.++||+++++++++.+....                  
T Consensus       162 ~~li~Dea~~~~~~~~~----~~~~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (366)
T 1m32_A          162 KTYIVDAMSSFGGIPMD----IAALHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNH  236 (366)
T ss_dssp             CEEEEECTTTTTTSCCC----TTTTTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTT
T ss_pred             CEEEEECCccccCcCcc----ccccCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccC
Confidence            99999999985432111    222345689999999763 2344799999998876554321                  


Q ss_pred             --CCCCCcHHHHHHHHHHhCCh-HH--HHHHHHHHHHHHHHHHHHHccCCCCeec-C---CCceEEEEEeCC--CCCHHH
Q 014492          310 --QPYNVSVAAEVAACAALQNP-IY--LEKVKEALIKERERLFKLLKDVPFLNPY-P---SYSNFILCEVTS--GMDAKK  378 (423)
Q Consensus       310 --~~~~~~~~~~~a~~~~l~~~-~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p---~~~~~~~~~~~~--~~~~~~  378 (423)
                        ..++.+..++.++.++++.. ++  +++.+++++++++++.+.|++++ +.+. +   ..++++|+++++  +.+..+
T Consensus       237 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (366)
T 1m32_A          237 GKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALG-FNTLLDDELHSPIITAFYSPEDPQYRFSE  315 (366)
T ss_dssp             TCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCCCTTCCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCC-CeeccCchhcCceEEEEEcCccCCCCHHH
Confidence              12567788887777777652 33  67788999999999999998874 4433 2   245689999986  678899


Q ss_pred             HHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          379 LKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       379 l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +.+.|.++||.++++..+ ..+++||+++   +.++++++.++|++
T Consensus       316 ~~~~l~~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~  360 (366)
T 1m32_A          316 FYRRLKEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRT  360 (366)
T ss_dssp             HHHHHHHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            999999999999987654 4689999998   56666666666654

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=4.7e-34  Score=278.46  Aligned_cols=310  Identities=13%  Similarity=0.067  Sum_probs=242.9

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCC--CcchHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014492          103 NENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (423)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Y~--~~g~~~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (423)
                      +..+.++++++.+++.+....+.++  .....++++++++++|+++  ++|++|+|+++++. ++..++++||+|+++.|
T Consensus         7 ~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~   85 (384)
T 3zrp_A            7 HVGPTTIKEDVLVAGLENNVGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSN   85 (384)
T ss_dssp             CSSCSCCCHHHHHHTTCCSCCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECS
T ss_pred             cCCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecC
Confidence            3456777899999998743222222  2246789999999999987  89999999999999 99989999999999999


Q ss_pred             Cchh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492          179 TFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       179 ~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea  255 (423)
                      +|..  +...++..|++++.+|.+.++.+|++++++.+.+.++++|++++|+||||.+++.+++.++|+. |+++|+|++
T Consensus        86 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a  165 (384)
T 3zrp_A           86 GVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGV  165 (384)
T ss_dssp             SHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECT
T ss_pred             CcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECc
Confidence            9965  5566677899999999887888999999999986589999999999999999999999999998 999999999


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH-------------HH-----------hcCC
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------WR-----------AKQP  311 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l-------------~~-----------~~~~  311 (423)
                      |.......    .....+.++++.|+||.++ ++.++||+++++++++.+             ..           ....
T Consensus       166 ~~~~~~~~----~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (384)
T 3zrp_A          166 SSVGAEEV----KAEEWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAY  240 (384)
T ss_dssp             TTTTTSCC----CTTTTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCC
T ss_pred             ccccCccc----cccccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCc
Confidence            98543211    1123345689999999875 334589999999988777             11           1222


Q ss_pred             C-CCcHHHHHHHHHHhCC-h-HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----CceEEEEEeCCCCCHHHHHHHH
Q 014492          312 Y-NVSVAAEVAACAALQN-P-IYLEKVKEALIKERERLFKLLKDVPFLNPYPS-----YSNFILCEVTSGMDAKKLKDDL  383 (423)
Q Consensus       312 ~-~~~~~~~~a~~~~l~~-~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~~~~~~~~~~~~~~~~~l~~~L  383 (423)
                      + +.+...+.++..+++. . ..+++.+++++++++++.+.|++++ +.+.+.     .++++++.+++ .+..++.+.|
T Consensus       241 ~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l  318 (384)
T 3zrp_A          241 FATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILKV-ADPQKVLAGT  318 (384)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECSS-SCHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECCC-CCHHHHHHHH
Confidence            3 5677777766666654 2 2367889999999999999999884 444433     36788899985 7899999999


Q ss_pred             HhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          384 AKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       384 ~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .++||.++++..... +++||++.   +.++++++.++|++
T Consensus       319 ~~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~  358 (384)
T 3zrp_A          319 VNEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIER  358 (384)
T ss_dssp             HTTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             HHCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHH
Confidence            988999998774323 89999987   55666666666654

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.7e-34  Score=284.19  Aligned_cols=317  Identities=15%  Similarity=0.126  Sum_probs=244.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CC----C-CCCC-----CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KF----P-YIYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~----~-~~Y~-----~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +.++|+.+.+. ++++++.+++.+. ..    . ..|+     .....++|+++++++|+++++|++|+|+++++.+++.
T Consensus        26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~  104 (406)
T 3cai_A           26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAE  104 (406)
T ss_dssp             SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHH
T ss_pred             CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHH
Confidence            46899988877 6788888888752 11    1 1242     2346789999999999988999999999999999999


Q ss_pred             Hh---cCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          165 CV---LDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       165 ~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++   +++||+|+++.|+|..+...+.    ..|++++.+|.+ +++.+|++++++.++ +++++|++++|+||||.+++
T Consensus       105 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~  183 (406)
T 3cai_A          105 ASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-KSTRLVAVNSASGTLGGVTD  183 (406)
T ss_dssp             HTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC-TTEEEEEEESBCTTTCBBCC
T ss_pred             HHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC-CCceEEEEeCCcCCccccCC
Confidence            87   7899999999999986544433    379999999976 667889999999997 68999999999999999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcC----
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQ----  310 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~----  310 (423)
                      .+++.++|+. |+++|+|++|........ ..   ..+.++++.|+||.+| ++  +| |+++++++++++.....    
T Consensus       184 l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~---~~~~d~~~~s~~K~~g-~~--~G~~~~~~~~~~~~l~~~~~~~~~  256 (406)
T 3cai_A          184 LRAMTKLVHDVGALVVVDHSAAAPYRLLD-IR---ETDADVVTVNAHAWGG-PP--IGAMVFRDPSVMNSFGSVSTNPYA  256 (406)
T ss_dssp             CHHHHHHHHHTTCEEEEECTTTTTTCCCC-HH---HHCCSEEEEEGGGGTS-CS--CEEEEESCHHHHHTSCCCCSCTTC
T ss_pred             HHHHHHHHHHcCCEEEEEcccccCCCCCC-ch---hcCCCEEEeehhhhcC-CC--cCeEEEEehHHHhhcCCcccCCCC
Confidence            9999999987 999999999984322111 11   2245688999999776 44  89 99999988877654421    


Q ss_pred             -------CCCCcHHHHHHHHHHhCCh-H---------------HHHHHHHHHHHHHHHHHHHHccCCCCeecCC---Cce
Q 014492          311 -------PYNVSVAAEVAACAALQNP-I---------------YLEKVKEALIKERERLFKLLKDVPFLNPYPS---YSN  364 (423)
Q Consensus       311 -------~~~~~~~~~~a~~~~l~~~-~---------------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~  364 (423)
                             .++.+...+.++..+++.. +               ++++.+++++++++++.+.|++++++.+.++   .++
T Consensus       257 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  336 (406)
T 3cai_A          257 TGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP  336 (406)
T ss_dssp             CGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS
T ss_pred             CccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC
Confidence                   3456666665555555421 1               5788899999999999999998866655433   255


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC---------CCCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492          365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN---------KELKGYVRVSVGK---PEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~---------~~~~~~iRis~~~---~~~~~~l~~al~~l  422 (423)
                      ++++.++ +.+..++.+.|.++||.++++..         ....+++||+++.   .++++++.++|+++
T Consensus       337 ~~~~~~~-~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          337 VVSFAVH-KVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             EEEEEET-TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             EEEEEEC-CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence            7888887 46788999999999999998761         1235899999984   66677777777654

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=100.00  E-value=9.7e-36  Score=289.36  Aligned_cols=313  Identities=15%  Similarity=0.136  Sum_probs=242.2

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCC----------CCC-CCcchHHHHHH-HHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFP----------YIY-PDPESRRLRAA-LAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~----------~~Y-~~~g~~~lr~~-ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +++++|+.+.+..++++++.+++.+. ...          ..| +..+..+++++ +++++|.+  +|++|+|+++++..
T Consensus         7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~   84 (371)
T 2e7j_A            7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFA   84 (371)
T ss_dssp             -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHH
T ss_pred             CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHH
Confidence            45789998777777889999999873 211          112 55678999999 99999986  99999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEec--CCCCCCCCHHHHHHHhhc----CCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.+++++||+|+++.|+|..+...++..|++++.+|  .++++.+|++++++.+++    +++++|++++|+||||.++
T Consensus        85 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~  164 (371)
T 2e7j_A           85 VMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP  164 (371)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccC
Confidence            9999999999999999999999988999999999999  777789999999999963    5789999999999999999


Q ss_pred             CHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH-HHHhcC---
Q 014492          236 NDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQ---  310 (423)
Q Consensus       236 ~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~-l~~~~~---  310 (423)
                      +.+++.++|+. |+++|+||+|..+..... ..   ..+..+++.|+||.++. |.|+||+++++++++. +.....   
T Consensus       165 ~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~---~~~~di~~~s~sK~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~  239 (371)
T 2e7j_A          165 DVKKIAKVCSEYDVPLLVNGAYAIGRMPVS-LK---EIGADFIVGSGHKSMAA-SGPIGVMGMKEEWAEIVLRRSEKYKN  239 (371)
T ss_dssp             CHHHHHHHHHTTTCCEEEECTTTBTTBCCC-HH---HHTCSEEEEEHHHHSSC-CSSCEEEEECTTTTTTTTCBCSSCTT
T ss_pred             CHHHHHHHHHHcCCeEEEECccccCCCCCC-hh---hcCCCEEEecCCcCCCC-CCCcEEEEEechhhhhhccccccCcc
Confidence            99999999998 999999999997654211 11   12344899999999874 4599999999988776 654433   


Q ss_pred             ------CCCCcHHHHHHHHHHhCChHHHHHHHHHH--HHHHHHHHHHHccCCCCeec-CC--CceEEEEEeCCCCCHHHH
Q 014492          311 ------PYNVSVAAEVAACAALQNPIYLEKVKEAL--IKERERLFKLLKDVPFLNPY-PS--YSNFILCEVTSGMDAKKL  379 (423)
Q Consensus       311 ------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~-p~--~~~~~~~~~~~~~~~~~l  379 (423)
                            .++.+...+.++..+++..+.  +..+++  +++++++.+.|+++ ++.+. +.  .++++|++++   +..++
T Consensus       240 ~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~  313 (371)
T 2e7j_A          240 KEVELLGCTARGATIITLMASFPHVRE--RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE---VLYEI  313 (371)
T ss_dssp             SBGGGTTCCCCSHHHHHHHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH---HHHHH
T ss_pred             cccccccCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC---CHHHH
Confidence                  345566666666666643221  566777  88999999999887 45543 32  4779999986   67889


Q ss_pred             HHHHHhCCcEEEeCCCC-----C-CCCeEE-EEecC----hhhHHHHHHHHhh
Q 014492          380 KDDLAKMGVMIRHYNNK-----E-LKGYVR-VSVGK----PEHTDALMECLMH  421 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~-----~-~~~~iR-is~~~----~~~~~~l~~al~~  421 (423)
                      .+.|.++||.+.+ ..+     + .++++| |+++.    .++++++.++|++
T Consensus       314 ~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~  365 (371)
T 2e7j_A          314 SKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKE  365 (371)
T ss_dssp             HHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHH
Confidence            9998899999987 321     1 168999 99873    4455555555543

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=7.5e-34  Score=279.83  Aligned_cols=313  Identities=14%  Similarity=0.047  Sum_probs=246.5

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCCc-EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc
Q 014492          104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPTF  180 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~~-i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y  180 (423)
                      ..|.++++++.+++.+....+.++..  ...++++.+++++|.+.++ +++++|+++++..++..++++||+|+++.|+|
T Consensus        19 pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~   98 (411)
T 3nnk_A           19 PGPINADPRVLRAMSSQLIGQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGR   98 (411)
T ss_dssp             SSCCCCCHHHHHHHTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSH
T ss_pred             CCCCCCCHHHHHHhhccccccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCc
Confidence            46778889999999874332333321  2578999999999987765 88899999999999999999999999999999


Q ss_pred             hh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc
Q 014492          181 TM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT  257 (423)
Q Consensus       181 ~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~  257 (423)
                      ..  +...++..|++++.+|.+.++.+|++++++.+.+.++++|++++|+||||.+.+.+++.++|+. |+++|+||+|.
T Consensus        99 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~  178 (411)
T 3nnk_A           99 FGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATAS  178 (411)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTT
T ss_pred             hHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcc
Confidence            76  8888889999999999888888999999999974589999999999999999999999999997 99999999987


Q ss_pred             cccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc----------------------------
Q 014492          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----------------------------  309 (423)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~----------------------------  309 (423)
                      .....    ......+.++++.|++|.++ ++.++||+++++++++.+....                            
T Consensus       179 ~~~~~----~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~  253 (411)
T 3nnk_A          179 LGGNP----LETDVWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGM  253 (411)
T ss_dssp             BTTBC----CCTTTTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHH
T ss_pred             cCCcc----cchhccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHH
Confidence            43211    11122345689999999743 3446899999999998887643                            


Q ss_pred             ----------CCCCCcHHHHHHHHHHhCC-hHH-HHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCCCC
Q 014492          310 ----------QPYNVSVAAEVAACAALQN-PIY-LEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGM  374 (423)
Q Consensus       310 ----------~~~~~~~~~~~a~~~~l~~-~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~~~  374 (423)
                                ..++.+..++.++..+++. .++ +++.+++++++++++.+.|++++.....+.   .++++++.+|++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~  333 (411)
T 3nnk_A          254 VMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGI  333 (411)
T ss_dssp             HHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTC
T ss_pred             HHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCC
Confidence                      1245677777777777764 233 788899999999999999998753222232   3678899998778


Q ss_pred             CHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492          375 DAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  421 (423)
Q Consensus       375 ~~~~l~~~L~~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  421 (423)
                      +..++.+.|.++ ||.++++.....++++||++ +   +.++++++.++|++
T Consensus       334 ~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~  385 (411)
T 3nnk_A          334 NGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEA  385 (411)
T ss_dssp             CHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence            899999999865 99999875544568999998 5   34556666665554

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=2.8e-34  Score=276.74  Aligned_cols=310  Identities=16%  Similarity=0.080  Sum_probs=241.4

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014492          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (423)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (423)
                      +.+++++++++.+++.+....+.|+..  ...++|+++++++|++  +++|++|+|+++++..+++.+++  |+|+++.|
T Consensus         5 ~~gp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~   82 (353)
T 2yrr_A            5 TPGPTPIPERVQKALLRPMRGHLDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVN   82 (353)
T ss_dssp             SSSSCCCCHHHHGGGGSCCCCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEEC
T ss_pred             CCCCCCCCHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcC
Confidence            346677889999999874332455432  4789999999999985  67899999999999999998876  88999999


Q ss_pred             Cchhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492          179 TFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       179 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea  255 (423)
                      +|+.+  ...++..|++++.+|.++++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++|+||+
T Consensus        83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a  162 (353)
T 2yrr_A           83 GAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAV  162 (353)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECT
T ss_pred             CCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcC
Confidence            99874  455677899999999877778999999999974389999999999999999999999999998 999999999


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHH-----------------HhcCCCCCcHH
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW-----------------RAKQPYNVSVA  317 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~-----------------~~~~~~~~~~~  317 (423)
                      |..... +....   ..+..+++.|++|.+ |.+|  +||+++++++++.+.                 .....++.+..
T Consensus       163 ~~~~~~-~~~~~---~~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (353)
T 2yrr_A          163 TTLGML-PFSMR---AMGVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVL  236 (353)
T ss_dssp             TTTTTS-CCCHH---HHTCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHH
T ss_pred             cccccc-ccccc---ccCceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHH
Confidence            963322 11111   223347888999954 4456  799999999887653                 11223567777


Q ss_pred             HHHHHHHHhCCh-HH-HHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCCCCCHHHHHHHHHhCCcEEEe
Q 014492          318 AEVAACAALQNP-IY-LEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLAKMGVMIRH  392 (423)
Q Consensus       318 ~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~  392 (423)
                      .+.++.++++.. ++ +++.+++++++++++.+.|+++ ++.+.++   .+++++++++++.+..++.+.|.++||.+++
T Consensus       237 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~  315 (353)
T 2yrr_A          237 LHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAG  315 (353)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEE
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeC
Confidence            777777777542 22 6788899999999999999887 4554433   4566789987677899999999999999998


Q ss_pred             CCCCCCCCeEEEEe---cChhhHH-HHHHHHhh
Q 014492          393 YNNKELKGYVRVSV---GKPEHTD-ALMECLMH  421 (423)
Q Consensus       393 ~~~~~~~~~iRis~---~~~~~~~-~l~~al~~  421 (423)
                      +..+..++++||++   .+.++.+ ++.++|++
T Consensus       316 g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~  348 (353)
T 2yrr_A          316 GIGPTRGQVLRLGLMGEGARREAYQAFLKALDR  348 (353)
T ss_dssp             CCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHH
T ss_pred             CccccCCCeEEEecCccCCHHHHHHHHHHHHHH
Confidence            87655578999998   4566666 67676654

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=4.5e-34  Score=279.86  Aligned_cols=316  Identities=17%  Similarity=0.147  Sum_probs=243.9

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCCCCCCCC--CcchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           97 IVKIDANENPYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~--~~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      .+.+..  +++++++++.+++.+....+.++  .....++++++++++|++++ +|++|+|+++++..++.+++++||+|
T Consensus        20 ~~~~~~--g~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v   97 (393)
T 2huf_A           20 KLLMGP--GPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVI   97 (393)
T ss_dssp             CEECSS--SCCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             eEEecC--CCCCCCHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEE
Confidence            345544  46778899999998743322222  23578999999999999876 89999999999999999999999999


Q ss_pred             EEcCCCchhhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492          174 VDCPPTFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (423)
Q Consensus       174 l~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l  250 (423)
                      +++.|+|+.+.  ..++..|++++.+|.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++
T Consensus        98 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~l  177 (393)
T 2huf_A           98 LIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLL  177 (393)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEE
T ss_pred             EEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEE
Confidence            99999998743  34566899999999877778999999999973379999999999999999999999999987 9999


Q ss_pred             EEccCCccccCCCchhhhhccCCcEEEEccChhh-hcccCccccccccCHHHHHHHHHhc---CC---------------
Q 014492          251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR-AGLAGLRVGYGAFPLSIIEYLWRAK---QP---------------  311 (423)
Q Consensus       251 i~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~-~g~~G~R~G~i~~~~~~~~~l~~~~---~~---------------  311 (423)
                      |+||+|.....   ... +...+.++++.|+||. +|++|+  ||+++++++++.+.+..   .+               
T Consensus       178 i~D~a~~~~~~---~~~-~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (393)
T 2huf_A          178 IVDTVASLGGA---PMF-MDRWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCF  251 (393)
T ss_dssp             EEECTTTBTTB---CCC-TTTTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCS
T ss_pred             EEEcccccCCC---Ccc-hhhcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccc
Confidence            99999863221   111 2234567899999997 456776  99999999998887541   11               


Q ss_pred             -------CCCcHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHHHccCCCCeecCC----CceEEEEEeCCCCCHHH
Q 014492          312 -------YNVSVAAEVAACAALQNP-I-YLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKK  378 (423)
Q Consensus       312 -------~~~~~~~~~a~~~~l~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~~~~~~~~~~~~~~~  378 (423)
                             .+.+..++.++.++++.. + .+++.+++++++++++.+.|++++ +.+.++    .+++++++++.+.+..+
T Consensus       252 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (393)
T 2huf_A          252 GRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAG-FELYADPKDRLSTVTTIKVPQGVDWLK  330 (393)
T ss_dssp             SSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCTTEEEEECCTTCCHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCccccCCcEEEEEcCCCCCHHH
Confidence                   245667777676677542 2 367888999999999999998874 444332    24588899876778899


Q ss_pred             HHHHHHh-CCcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492          379 LKDDLAK-MGVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  421 (423)
Q Consensus       379 l~~~L~~-~gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  421 (423)
                      +.+.|.+ +||.++++..+..++++||++ +   +.++++++.++|++
T Consensus       331 ~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~  378 (393)
T 2huf_A          331 AAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQE  378 (393)
T ss_dssp             HHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHH
Confidence            9999985 599999876554578999999 4   34456666666654

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=6.3e-34  Score=277.07  Aligned_cols=312  Identities=16%  Similarity=0.108  Sum_probs=234.5

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc----------chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           98 VKIDANENPYGPPPEVREALGQL-KFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~----------g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      ++|+.+.+ .++++.+.+++.+. .....+|..          ...++++++++++|+++++|++|+|+++++.++++++
T Consensus         2 iyld~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~   80 (382)
T 4hvk_A            2 AYFDYTSA-KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             CBCBTTTC-CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred             EeecCCCc-CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHh
Confidence            45665544 35678888888762 221222221          2348999999999998889999999999999999998


Q ss_pred             c----CCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      +    ++||.|+++.++|+.+...++.   .|++++.+|.++++.+|++++++.+. +++++|++++|+||||.+++.++
T Consensus        81 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~  159 (382)
T 4hvk_A           81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE  159 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred             hhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhc-cCceEEEEECCCCCceeeCCHHH
Confidence            8    9999999999999987765544   69999999988888899999999997 68999999999999999999999


Q ss_pred             HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------c
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------K  309 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~  309 (423)
                      +.++|+. |+ +|+|++|........    ....+.++++.|+||.+|.+|  +|+++++++.  .+...         .
T Consensus       160 i~~l~~~~~~-li~D~a~~~~~~~~~----~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~~~~~~~~~~~  230 (382)
T 4hvk_A          160 ISEVLAGKAA-LHIDATASVGQIEVD----VEKIGADMLTISSNDIYGPKG--VGALWIRKEA--KLQPVILGGGQENGL  230 (382)
T ss_dssp             HHHHHSSSSE-EEEECTTTBTTBCCC----HHHHTCSEEEEESGGGTSCTT--CEEEEEETTC--CCCCSSCSSCTGGGT
T ss_pred             HHHHHHHcCE-EEEEhHHhcCCCCCC----chhcCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcccccCCCcCcc
Confidence            9999998 99 999999874321111    112234589999999877666  6777765543  11111         1


Q ss_pred             CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHH
Q 014492          310 QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      ..++.+...+.++.++++. .+++++.+++++++++++.+.|++++++.+.+..    ++++++.++ +.+..++.+.|.
T Consensus       231 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  309 (382)
T 4hvk_A          231 RSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLD  309 (382)
T ss_dssp             SCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TCCHHHHHHHHH
T ss_pred             ccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC-CCCHHHHHHHHH
Confidence            1344567777777666653 3577889999999999999999988766654332    357778886 678899999999


Q ss_pred             hCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492          385 KMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       385 ~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++||.++++..+..                   ++++||+++   +.++++++.++|++
T Consensus       310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~  368 (382)
T 4hvk_A          310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG  368 (382)
T ss_dssp             HTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHH
Confidence            99999998754211                   589999998   56666777766654

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=1e-33  Score=280.14  Aligned_cols=318  Identities=15%  Similarity=0.103  Sum_probs=245.2

Q ss_pred             CCCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc-----------chHHHHHHHHHHhCCCCCcEEEeCCHHHH
Q 014492           93 KPEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-----------ESRRLRAALAKDSGLESDHILVGCGADEL  158 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~-----------g~~~lr~~ia~~~g~~~~~i~~t~G~~~a  158 (423)
                      ++.+.++|+.+.+. ++++++.+++.+. .  ....+|..           ...++++++++++|+++++|++|+|++++
T Consensus        19 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a   97 (423)
T 3lvm_A           19 AMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATES   97 (423)
T ss_dssp             -CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHH
T ss_pred             ccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHH
Confidence            45678999987775 6789999999873 3  12222221           23689999999999988999999999999


Q ss_pred             HHHHHHHhcC----CCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492          159 IDLIMRCVLD----PGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (423)
Q Consensus       159 l~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (423)
                      +.++++++++    +||.|+++.|+|+.+...+   +..|++++.+|.+.++.+|++++++.+. +++++|++++|+|||
T Consensus        98 ~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~npt  176 (423)
T 3lvm_A           98 DNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEI  176 (423)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTT
T ss_pred             HHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcC-CCcEEEEEeCCCCCC
Confidence            9999998874    7999999999999887766   4459999999988888899999999997 689999999999999


Q ss_pred             CcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc-
Q 014492          232 GSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-  309 (423)
Q Consensus       232 G~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~-  309 (423)
                      |.+++.++|.++|+. |++||+||+|......    ......+.++++.|+||.+|.+|  +||++++++.++.+.... 
T Consensus       177 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~----~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~~~~~~~  250 (423)
T 3lvm_A          177 GVVQDIAAIGEMCRARGIIYHVDATQSVGKLP----IDLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMH  250 (423)
T ss_dssp             CBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC----CCTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSC
T ss_pred             ccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC----cChhhcCCCEEEechHHhcCCCC--eEEEEEeccccCCCCcccc
Confidence            999999999999988 9999999998753321    11123345689999999887666  899999877665554332 


Q ss_pred             --------CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCH
Q 014492          310 --------QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDA  376 (423)
Q Consensus       310 --------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~  376 (423)
                              ..++.+...+.++..+++. .+++++.+++++++++++.+.|++++++.+.+..    ++++++.++ +.+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  329 (423)
T 3lvm_A          251 GGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN-YVEG  329 (423)
T ss_dssp             SSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEET-TSCH
T ss_pred             CCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeC-CCCH
Confidence                    2345677777777666654 3457888999999999999999998766654333    356777775 6788


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCC-------------------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492          377 KKLKDDLAKMGVMIRHYNNKEL-------------------KGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       377 ~~l~~~L~~~gI~v~~~~~~~~-------------------~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .++.+.|.+  |.++++..+..                   .+++||+++   +.++++++.++|++
T Consensus       330 ~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~  394 (423)
T 3lvm_A          330 ESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRK  394 (423)
T ss_dssp             HHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHH
Confidence            889888876  88877653111                   489999998   55666777666654

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=2.7e-33  Score=276.30  Aligned_cols=311  Identities=13%  Similarity=0.043  Sum_probs=244.9

Q ss_pred             CCCCCCCHHHHHHHhcCCCCCCCCC---cchHHHHHHHHHHhCCCCCcEE-EeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          104 ENPYGPPPEVREALGQLKFPYIYPD---PESRRLRAALAKDSGLESDHIL-VGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~~~~Y~~---~g~~~lr~~ia~~~g~~~~~i~-~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      ..+.+.++.+.+++.+... ..|+.   ....++++++++++|.++++++ +++|+++++..++.+++++||+|+++.|+
T Consensus        17 p~p~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~   95 (416)
T 3isl_A           17 PGPVEVDPRVLRVMSTPVV-GQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYG   95 (416)
T ss_dssp             SSSCCCCHHHHHHTTSCCC-CTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CCCcCcCHHHHHHhcccCC-CCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCC
Confidence            3566678899998877432 22322   2367899999999999877665 88999999999999999999999999999


Q ss_pred             chh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492          180 FTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (423)
Q Consensus       180 y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay  256 (423)
                      |..  +...++..|++++.+|.+.++.+|++++++++++.++++|++++|+||||.+++.+++.++|+. |+++|+|++|
T Consensus        96 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~  175 (416)
T 3isl_A           96 RFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVA  175 (416)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTT
T ss_pred             cccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCc
Confidence            987  7777888999999999887888999999999975589999999999999999999999999987 9999999998


Q ss_pred             ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc---------------------------
Q 014492          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------------------------  309 (423)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~---------------------------  309 (423)
                      .......    .....+.++++.|++|.++ ++.++|++++++++++.+...+                           
T Consensus       176 ~~~~~~~----~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~  250 (416)
T 3isl_A          176 TIGGCEV----KVDEWKIDAAIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFD  250 (416)
T ss_dssp             TTTTSCC----CTTTTTCSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTC
T ss_pred             cccCCCc----chhhcCCCEEEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccc
Confidence            7433211    1122345689999999743 3445899999999988876421                           


Q ss_pred             -------------CCCCCcHHHHHHHHHHhCC-hHH-HHHHHHHHHHHHHHHHHHHccCCCCeecCC-C---ceEEEEEe
Q 014492          310 -------------QPYNVSVAAEVAACAALQN-PIY-LEKVKEALIKERERLFKLLKDVPFLNPYPS-Y---SNFILCEV  370 (423)
Q Consensus       310 -------------~~~~~~~~~~~a~~~~l~~-~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-~---~~~~~~~~  370 (423)
                                   ..++.+...+.++.++++. .++ +++.+++++++++++.+.|++++ +.+.+. .   ++++++.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~  329 (416)
T 3isl_A          251 LSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMG-LRLFGDDSCKMPVVTCVEI  329 (416)
T ss_dssp             HHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBCSCGGGBCTTEEEEEC
T ss_pred             hHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCccccCCcEEEEeC
Confidence                         1235677777777777765 334 78899999999999999999874 443332 2   57888999


Q ss_pred             CCCCCHHHHHHHHHhC-CcEEEeCCCCCCCCeEEEEe---cChhh-HHHHHHHHhh
Q 014492          371 TSGMDAKKLKDDLAKM-GVMIRHYNNKELKGYVRVSV---GKPEH-TDALMECLMH  421 (423)
Q Consensus       371 ~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~iRis~---~~~~~-~~~l~~al~~  421 (423)
                      +++.+..++.+.|.++ ||.++++..+..++++||++   .+.++ ++++.++|++
T Consensus       330 ~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~  385 (416)
T 3isl_A          330 PGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEA  385 (416)
T ss_dssp             CTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHH
Confidence            8778899999999865 99999877555678999999   45554 6666666654

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=1e-33  Score=276.96  Aligned_cols=313  Identities=14%  Similarity=0.131  Sum_probs=244.5

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014492          103 NENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPT  179 (423)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~  179 (423)
                      +..+.++++++.+++.+....+.++.  ....+++++++++++.+.+ +|++|+|+++++..++++++++||+|+++.++
T Consensus        28 ~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~  107 (393)
T 3kgw_A           28 GPGPSNLAPRVLAAGSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNG  107 (393)
T ss_dssp             SSSCCCCCHHHHHHTTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESS
T ss_pred             cCCCCCCCHHHHHHhcccccCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCC
Confidence            34677788999999987433233333  2356899999999998655 59999999999999999999999999999888


Q ss_pred             ch--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492          180 FT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (423)
Q Consensus       180 y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay  256 (423)
                      |.  .+...++..|++++.+|.+.++.+|++++++.+++.++++|++++|+||||.+++.+++.++|+. |+++|+||+|
T Consensus       108 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~  187 (393)
T 3kgw_A          108 IWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVA  187 (393)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTT
T ss_pred             chhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCc
Confidence            85  34667788999999999877778999999999984489999999999999999999999999987 9999999999


Q ss_pred             ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-------------------------C
Q 014492          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------------------P  311 (423)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-------------------------~  311 (423)
                      .......    .....+..+++.|+||.++ ++.++||+++++++++.+.....                         .
T Consensus       188 ~~g~~~~----~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (393)
T 3kgw_A          188 SLGGVPI----YMDQQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIH  262 (393)
T ss_dssp             TTTTSCC----CTTTTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCC
T ss_pred             cccCccc----chhhcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCC
Confidence            7432111    1123345688899999764 33448999999999988865332                         2


Q ss_pred             CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC----CceEEEEEeCCCCCHHHHHHHHH
Q 014492          312 YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS----YSNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~----~~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      ++.+..++.++.++++.  .+++++.+++++++++++.+.|++++ +.+. +.    .+.++++.++++.+..++.+.|.
T Consensus       263 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  341 (393)
T 3kgw_A          263 HTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMG-LKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVL  341 (393)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHH
Confidence            35677777777777764  23478889999999999999999884 4433 22    24677889887788999999998


Q ss_pred             hC-CcEEEeCCCCCCCCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492          385 KM-GVMIRHYNNKELKGYVRVSV-G---KPEHTDALMECLMH  421 (423)
Q Consensus       385 ~~-gI~v~~~~~~~~~~~iRis~-~---~~~~~~~l~~al~~  421 (423)
                      ++ ||.++++..+..++++||++ +   +.++++++.++|++
T Consensus       342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~  383 (393)
T 3kgw_A          342 DHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALRE  383 (393)
T ss_dssp             HHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred             HhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHH
Confidence            76 99999887655678999998 4   45566666666554

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=5.5e-34  Score=277.93  Aligned_cols=314  Identities=16%  Similarity=0.118  Sum_probs=237.8

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-CC----CC-CCCC-----cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           98 VKIDANENPYGPPPEVREALGQL-KF----PY-IYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~----~~-~Y~~-----~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      +.|+.+.+. ++++.+++++.+. ..    .+ .|+.     ....++|+++++++|+++++|++|+|+++++.+++.++
T Consensus         2 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l   80 (382)
T 4eb5_A            2 AYFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGY   80 (382)
T ss_dssp             CBCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHH
T ss_pred             eeeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHH
Confidence            456665554 5788998888762 21    11 2421     24578999999999998889999999999999999998


Q ss_pred             c----CCCCeEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          167 L----DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       167 ~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      .    ++||+|++++|+|+.+...++.   .|++++.+|.++++.+|++++++.++ .++++|++++|+||||.+++.++
T Consensus        81 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~  159 (382)
T 4eb5_A           81 AMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR-DDTILVSVQHANNEIGTIQPVEE  159 (382)
T ss_dssp             HHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC-TTEEEEECCSBCTTTCBBCCHHH
T ss_pred             HhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc-CCCeEEEEeccCCCccccCCHHH
Confidence            8    8999999999999987766653   69999999987777899999999997 58999999999999999999999


Q ss_pred             HHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH-HHHHH------HhcCC
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLW------RAKQP  311 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~-~~~l~------~~~~~  311 (423)
                      +.++|+. |++ |+||+|..... +..   +...+.++++.|+||.+|.+|  +||++++++. +....      .....
T Consensus       160 i~~l~~~~~~~-i~D~a~~~g~~-~~~---~~~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~  232 (382)
T 4eb5_A          160 ISEVLAGKAAL-HIDATASVGQI-EVD---VEKIGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRS  232 (382)
T ss_dssp             HHHHHTTSSEE-EEECTTTBTTB-CCC---HHHHTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSC
T ss_pred             HHHHHHHCCCE-EEEcchhcCCc-ccC---ccccCCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccC
Confidence            9999998 999 99999983211 111   112245689999999887666  6898887663 21110      11123


Q ss_pred             CCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCCCHHHHHHHHHhC
Q 014492          312 YNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGMDAKKLKDDLAKM  386 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~~~~~l~~~L~~~  386 (423)
                      ++.+...+.++..+++. .+++++.+++++++++++.+.|++++++.+.++.    ++++++.++ +.+..++.+.|.++
T Consensus       233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~  311 (382)
T 4eb5_A          233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS-YIEGESIVLSLDMA  311 (382)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET-TSCHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC-CcCHHHHHHHHHHC
Confidence            45666666666666654 3457888999999999999999988655554332    568888887 67889999999999


Q ss_pred             CcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          387 GVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       387 gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ||.++++..+              +     .++++||+++   +.++++++.++|++
T Consensus       312 gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  368 (382)
T 4eb5_A          312 GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPG  368 (382)
T ss_dssp             TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence            9999987531              1     2579999998   55666666666554

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=3.5e-34  Score=281.74  Aligned_cols=318  Identities=19%  Similarity=0.124  Sum_probs=240.9

Q ss_pred             CCCeeEcCCCCC-CCCCCHHHHHHHhcC----CC-----CCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDANEN-PYGPPPEVREALGQL----KF-----PYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~~~-~~~~~~~v~~al~~~----~~-----~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +++++++..+++ .++++|++.+++.+.    ..     ...|+.. +..++|+++++++|. +++|++++|++ ++..+
T Consensus        45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~~sG~~-a~~~~  122 (401)
T 2bwn_A           45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVFSSAYN-ANDAT  122 (401)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEESCHHH-HHHHH
T ss_pred             CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEECCcHH-HHHHH
Confidence            355788887766 566788888888652    11     1234443 678999999999996 57899988887 66666


Q ss_pred             HHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCH
Q 014492          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      +..++  .+||.|+++.|+|+.+...++..|++++.+|.+     |++++++.+..   +++++|++++|+||||.+++.
T Consensus       123 ~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l  197 (401)
T 2bwn_A          123 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI  197 (401)
T ss_dssp             HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred             HHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCH
Confidence            66553  589999999999999999899999999999963     78888888753   478999999999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-  311 (423)
                      +++.++|+. |+++|+||+|..+.+++.   .....+. .+.+++++|+||.+|++|   ||+++++++++.+...... 
T Consensus       198 ~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~  274 (401)
T 2bwn_A          198 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGF  274 (401)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCc
Confidence            999999998 999999999995443221   1111111 123688999999999888   9999999998887654321 


Q ss_pred             ---CCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014492          312 ---YNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-K  385 (423)
Q Consensus       312 ---~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~  385 (423)
                         .+.+++.+.++.++++..  ..+++.+++++++++++.+.|++++ +.+.++.++++|+.++++.+..++.+.|. +
T Consensus       275 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~  353 (401)
T 2bwn_A          275 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHGSHIVPVVIGDPVHTKAVSDMLLSD  353 (401)
T ss_dssp             HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSSSCEEEECCCHHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCeEEEEeCChHHHHHHHHHHHhc
Confidence               234557777777777542  2247888899999999999998874 45445556799999975456788999996 8


Q ss_pred             CCcEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      +||.++++..+.   +.+++||+++   +.++++++.++|+++
T Consensus       354 ~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~  396 (401)
T 2bwn_A          354 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  396 (401)
T ss_dssp             HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHH
Confidence            899998876533   2369999998   566667777666653

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=1e-33  Score=280.89  Aligned_cols=318  Identities=15%  Similarity=0.089  Sum_probs=243.5

Q ss_pred             CCCCeeEcCCCCC-CCCCCHHHHHHHhcC-C-CCCC---C----C-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANEN-PYGPPPEVREALGQL-K-FPYI---Y----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~~-~-~~~~---Y----~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ++.++|||+.|.+ .+.++|++.+++.+. . ++..   |    + .....++++.+++++|.+ +.+ +++++++++..
T Consensus        62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~-~~i-~~~sGs~a~~~  139 (427)
T 2w8t_A           62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT-GAI-VFSTGYMANLG  139 (427)
T ss_dssp             TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS-EEE-EESCHHHHHHH
T ss_pred             CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC-ceE-EecCcHHHHHH
Confidence            4567899999864 445788888887652 1 1111   2    1 233578999999999974 444 45555568888


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC---CceEEEEcCCCCCcCcCCCHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ++.+++++||.|+++.|+|..+...++..|++++.+|     ..|++++++.+.+.   ++++|++++++||||.+++.+
T Consensus       140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~  214 (427)
T 2w8t_A          140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFR-----HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLK  214 (427)
T ss_dssp             HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEEC-----TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHH
T ss_pred             HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeC-----CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence            8998999999999999999999999999999999988     36899999998742   789999999999999999999


Q ss_pred             HHHHHHcC-CCEEEEccCCccccCCC---chhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc----
Q 014492          239 DLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (423)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~----  309 (423)
                      +|.++|+. |+++|+||+|..+..+.   ......+ ..+.+++++||||.+|++|   ||+++++++++.+....    
T Consensus       215 ~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~l~~~~~~~~  291 (427)
T 2w8t_A          215 EMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEAVRLACRPYI  291 (427)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGGGGGTCHHHH
T ss_pred             HHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHHHHHhccccc
Confidence            99999987 99999999999876542   1222122 2345799999999998777   99999988887765432    


Q ss_pred             CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC-CceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          310 QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS-YSNFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~-~~~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      ..++.++..+.++.++|+..+..++.+++++++++++.+.|++++ +.+. ++ .++++|+.++++.+..++.+.|.++|
T Consensus       292 ~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G  370 (427)
T 2w8t_A          292 FTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMG-FRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGG  370 (427)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHT-CEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred             ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence            234677777777777776533357788899999999999998874 4444 55 77899999975456788999999899


Q ss_pred             cEEEeCCCCC---CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          388 VMIRHYNNKE---LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       388 I~v~~~~~~~---~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      |.+.++..+.   ..+++||+++   +.++++++.++|++
T Consensus       371 i~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~  410 (427)
T 2w8t_A          371 LYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQA  410 (427)
T ss_dssp             EECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             eEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence            9999876532   3469999998   45555555555543

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=8.2e-34  Score=276.36  Aligned_cols=308  Identities=14%  Similarity=0.158  Sum_probs=233.9

Q ss_pred             CCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           93 KPEDIVKIDANE--NPYG-PPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      .+..++||+.+.  ++++ +++.+.+++.+. .    ....|++.+..++++++++++|+ +++|++|+|+++++..++.
T Consensus        26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~  104 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIK  104 (375)
T ss_dssp             TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHH
Confidence            456789998875  5777 789998888762 1    12467777788999999999998 4899999999999999987


Q ss_pred             H---hc---CCC-CeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492          165 C---VL---DPG-DKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (423)
Q Consensus       165 ~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (423)
                      .   ++   ++| |+|++++|+|+.+...+...+..             +..+|.     .|++++++.++ +++++|++
T Consensus       105 ~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~  178 (375)
T 2eh6_A          105 LARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLD-EETAGIII  178 (375)
T ss_dssp             HHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCC-TTEEEEEE
T ss_pred             HHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhc-CCeEEEEE
Confidence            4   35   788 99999999998776655443322             333331     58999999997 68999999


Q ss_pred             cCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492          225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       225 ~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      ++|+||||.+.+    .+++.++|+. |+++|+||+|.+|...+..  ....+...+++   ||||.++ +|+|+||+++
T Consensus       179 ~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~---s~SK~~~-~g~~~G~~~~  254 (375)
T 2eh6_A          179 EVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI---ALAKGLG-GGVPIGAILA  254 (375)
T ss_dssp             CSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred             eCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE---EEccccc-CCCCeEEEEE
Confidence            999999999976    5666666665 9999999999977543321  22222223433   7889998 7999999999


Q ss_pred             CHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCC
Q 014492          298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMD  375 (423)
Q Consensus       298 ~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~  375 (423)
                      ++++++.+..  ....++.+++.+.++.++|+..+   +..++++++++++.+.|++++. ...++.++|+|+++++  +
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~~~~~~~--~  328 (375)
T 2eh6_A          255 REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVE---KLLPHVREVGNYFKEKLKELGK-GKVKGRGLMLGLELER--E  328 (375)
T ss_dssp             EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTS-SEEEEETTEEEEECSS--C
T ss_pred             cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEEEEEEcC--c
Confidence            9988877655  23346778888888888875433   6778888999999999988765 3345678999999963  5


Q ss_pred             HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          376 AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       376 ~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ..++++.|.++||.+.++.    ++++||+++   +.++++++.++|++
T Consensus       329 ~~~~~~~l~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~  373 (375)
T 2eh6_A          329 CKDYVLKALEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLRE  373 (375)
T ss_dssp             CHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            6789999999999999864    689999965   45555555555554

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=100.00  E-value=3.8e-33  Score=274.76  Aligned_cols=305  Identities=16%  Similarity=0.117  Sum_probs=228.0

Q ss_pred             eEcCCCCCCCCCCHHHH----HHHh---cCCCCCCCCCcch---HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc
Q 014492           98 VKIDANENPYGPPPEVR----EALG---QLKFPYIYPDPES---RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~----~al~---~~~~~~~Y~~~g~---~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~  167 (423)
                      ..++.+++++.+++.+.    +++.   .-...++|+..+.   .++++++++++|.+  ++++++|+++++..++.+++
T Consensus        21 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~--~~i~~~~g~~ai~~~~~~l~   98 (404)
T 1e5e_A           21 QFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTE--ACVATSSGMGAIAATVLTIL   98 (404)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHC
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCC--cEEEeCChHHHHHHHHHHHh
Confidence            45677788887665433    3332   1122356755443   48999999999974  67777888899999999999


Q ss_pred             CCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          168 DPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       168 ~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      ++||.|+++.|+|..+..    .++..|++++.+|.+     |++++++.++ +++++|++++|+||||.+++.+++.++
T Consensus        99 ~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~t~~v~l~~p~NptG~v~~l~~i~~l  172 (404)
T 1e5e_A           99 KAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKD  172 (404)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             CCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcC-CCCcEEEEECCCCCCCcccCHHHHHHH
Confidence            999999999999998877    678899999999864     7889999997 689999999999999999999999999


Q ss_pred             HcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccc-cccccCHHHHH-HHHHhcCCC---CCcH
Q 014492          244 LEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQPY---NVSV  316 (423)
Q Consensus       244 ~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~~~~---~~~~  316 (423)
                      |+.  |+++|+||+|..+.+.. ..    ..++++++.|+||.|+++|+|+ ||+++++++++ .+......+   +.++
T Consensus       173 a~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~  247 (404)
T 1e5e_A          173 AHSQEGVLVIADNTFCSPMITN-PV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISP  247 (404)
T ss_dssp             HHTSTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCH
T ss_pred             HHhhcCCEEEEECCCchhhhCC-cc----ccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCH
Confidence            976  89999999999877532 22    2367799999999999999998 99999999888 777766554   5788


Q ss_pred             HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC--------------eec----CCCceEEEEEeCCCCCHHH
Q 014492          317 AAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL--------------NPY----PSYSNFILCEVTSGMDAKK  378 (423)
Q Consensus       317 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~----p~~~~~~~~~~~~~~~~~~  378 (423)
                      +.+.++..+++..   ....++..++.+.+.+.|++.+.+              .+.    .+.++|+.+++++  ..++
T Consensus       248 ~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~  322 (404)
T 1e5e_A          248 HDAWLITRGLSTL---NIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--GFEG  322 (404)
T ss_dssp             HHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--HHHH
T ss_pred             HHHHHHHHhHhHH---HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--CHHH
Confidence            8898888888763   334444556666666666554311              111    1236666668863  1344


Q ss_pred             HHHHHHhCCcEEEeCCCC------------------------CC--CCeEEEEecChhhHHHHHHHHhh
Q 014492          379 LKDDLAKMGVMIRHYNNK------------------------EL--KGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       379 l~~~L~~~gI~v~~~~~~------------------------~~--~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      +.+.|.+.||.+...+..                        .+  ++++|||++. ++++++.+.|++
T Consensus       323 ~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-e~~~~li~~l~~  390 (404)
T 1e5e_A          323 AKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-EDADELIADFKQ  390 (404)
T ss_dssp             HHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-SCHHHHHHHHHH
T ss_pred             HHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-CCHHHHHHHHHH
Confidence            556666889955532110                        11  5899999998 667888888765

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=1.4e-32  Score=268.93  Aligned_cols=306  Identities=19%  Similarity=0.133  Sum_probs=234.8

Q ss_pred             CCCCHHHHHHHhcC-CCCCCCCC--cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCC----------
Q 014492          107 YGPPPEVREALGQL-KFPYIYPD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP----------  169 (423)
Q Consensus       107 ~~~~~~v~~al~~~-~~~~~Y~~--~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~----------  169 (423)
                      .+++|++.+++.+. ......+.  ++    ..++++.+++++|+++++|++|+|+++++..++.+++.+          
T Consensus        40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~  119 (397)
T 3f9t_A           40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLS  119 (397)
T ss_dssp             CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhccc
Confidence            34567888888763 22111111  11    346889999999999999999999999999999988776          


Q ss_pred             ---CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492          170 ---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (423)
Q Consensus       170 ---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~  246 (423)
                         ||+|+++.|+|..+...++..|++++.+|.++++.+|++++++.+.+.++++|++++|+||||.+.+.+++.++|+.
T Consensus       120 ~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~  199 (397)
T 3f9t_A          120 KNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKE  199 (397)
T ss_dssp             CCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred             CCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence               99999999999999999999999999999888888999999999984489999999999999999999999999998


Q ss_pred             -CCEEEEccCCccccCC--Cc--------hhhhhccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHhcCC---
Q 014492          247 -PILVVLDEAYTEFSGL--ES--------RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAKQP---  311 (423)
Q Consensus       247 -~~~li~Deay~~~~~~--~~--------~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~---  311 (423)
                       |+++|+||+|..+...  +.        ....... +..+++.|++|.++ +|.|+|+++++++ +.+.+......   
T Consensus       200 ~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~  277 (397)
T 3f9t_A          200 NNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTE  277 (397)
T ss_dssp             HTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSS
T ss_pred             hCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccC
Confidence             9999999999865421  11        0111122 45688999999654 7889999888554 44433221111   


Q ss_pred             ----------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHH
Q 014492          312 ----------YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       312 ----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  381 (423)
                                ...+..++.++...+. ..++++..++++++++++.+.|++++...+.++.++++++.++   +..++.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---~~~~~~~  353 (397)
T 3f9t_A          278 TRQATILGTRVGFGGACTYAVLRYLG-REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDE---DYKEVCK  353 (397)
T ss_dssp             SEECSSCSSCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECT---THHHHHH
T ss_pred             CCccccccccccchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeC---CHHHHHH
Confidence                      1124456666666553 3556788888899999999999988543356677889999886   3788999


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          382 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .|.++||.++++..   ++++||+++   +.++++++.++|++
T Consensus       354 ~l~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~  393 (397)
T 3f9t_A          354 KLRDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNS  393 (397)
T ss_dssp             HHHHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHHhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence            99999999998763   589999998   55666666666654

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=100.00  E-value=4e-33  Score=268.61  Aligned_cols=310  Identities=17%  Similarity=0.197  Sum_probs=223.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCCC-CCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLKF-PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~-~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~  172 (423)
                      .++|+|+.+.+++ +++.+.+++.+... ...| ++++..+||+++++++|.+  ++++++|+++++.+++.+++++||+
T Consensus         3 ~~~i~~~~~~~~~-p~~~~~~a~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~~~~~~~~~gd~   79 (347)
T 1jg8_A            3 HMMIDLRSDTVTK-PTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE--AALFVPSGTMGNQVSIMAHTQRGDE   79 (347)
T ss_dssp             --CEECSCGGGCC-CCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHCCTTCE
T ss_pred             ceEEEeccccCCC-CCHHHHHHHhcCCCCCcccCCChHHHHHHHHHHHHhCCc--eEEEecCcHHHHHHHHHHhcCCCCE
Confidence            5679999999988 67899999976422 2245 6778889999999999963  6777888889999999999999999


Q ss_pred             EEEcCCCchh-hH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCc-CcCCCHHHHHHH
Q 014492          173 IVDCPPTFTM-YE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKI  243 (423)
Q Consensus       173 Vl~~~p~y~~-~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPt-G~~~~~~~l~~i  243 (423)
                      |+++.|+|.. |.  ..++..|++++.+ .++++.+|++++++++++     .++++|++++||||| |.+++.+++++|
T Consensus        80 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i  158 (347)
T 1jg8_A           80 VILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEI  158 (347)
T ss_dssp             EEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHH
T ss_pred             EEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHH
Confidence            9999999964 33  2567789999998 545566899999999974     268999999999999 999999877766


Q ss_pred             HcC----CCEEEEccCCcccc--C-CCchhhhhccCCcEEEEccChhhhcccCcccc-ccccCHHHHHHHHHhcCC----
Q 014492          244 LEM----PILVVLDEAYTEFS--G-LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQP----  311 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~--~-~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G-~i~~~~~~~~~l~~~~~~----  311 (423)
                      ++.    |+++|+||+|..+.  . +..........+.  ++.|+||.++++   +| |++.++++++++.+.+..    
T Consensus       159 ~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~--~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~  233 (347)
T 1jg8_A          159 CTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADS--VMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGG  233 (347)
T ss_dssp             HHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSE--EEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccE--EEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCc
Confidence            553    99999999985321  1 1122222222343  345899988743   67 566788888877654322    


Q ss_pred             CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEEeCC-CCCHHHHHHHHHhCCc
Q 014492          312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTS-GMDAKKLKDDLAKMGV  388 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI  388 (423)
                      ...+...+.++..+++.  +.+.+. +..++++++.+.|++++ +.+  .+..++|+|++++. +.+..++.+.|.++||
T Consensus       234 ~~~~~~~~~~~~~~l~~--~~~~~~-~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi  309 (347)
T 1jg8_A          234 MRQAGVLAAAGIIALTK--MVDRLK-EDHENARFLALKLKEIG-YSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGV  309 (347)
T ss_dssp             CSSTHHHHHHHHHHHHH--SSTTHH-HHHHHHHHHHHHHHHHT-CBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTE
T ss_pred             hhHHHHHHHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHhcC-ceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCC
Confidence            23455555555555542  111222 22346677788887663 332  45678899999974 5678999999999999


Q ss_pred             EEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          389 MIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       389 ~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .+++++    .+++||++.   +.++++++.++|++
T Consensus       310 ~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~  341 (347)
T 1jg8_A          310 LANAVS----DTEIRLVTHKDVSRNDIEEALNIFEK  341 (347)
T ss_dssp             ECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             EEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            999864    578999986   56666666666554

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=8.6e-33  Score=269.14  Aligned_cols=311  Identities=10%  Similarity=0.064  Sum_probs=232.2

Q ss_pred             CCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCC--CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014492          103 NENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPP  178 (423)
Q Consensus       103 ~~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~--~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p  178 (423)
                      +..+.+.++++.+++.+....+.++..  ...++++.+++++|++.  +.+++|+|++++++.++++++++||+|+++.|
T Consensus        24 ~pgp~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~  103 (376)
T 3f0h_A           24 TVGPVMSSEEVRAIGAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDG  103 (376)
T ss_dssp             SSSSCCCCHHHHHHHTSCCCCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEES
T ss_pred             cCCCCCCcHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeC
Confidence            345677889999999874333344432  24678999999999865  34555999999999999999999999999998


Q ss_pred             CchhhH--HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccC
Q 014492          179 TFTMYE--FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA  255 (423)
Q Consensus       179 ~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Dea  255 (423)
                      .|....  ..+...|++++.++.+.++.+|++++++.+. +++++|++++|+||||.+++.+++.++|+. |+++|+|++
T Consensus       104 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~  182 (376)
T 3f0h_A          104 GSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-QNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCV  182 (376)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-SCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred             ChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-cCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcC
Confidence            776543  3466789999999988788999999999876 789999999999999999999999999987 999999999


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhc-------------------CCCCCc
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAK-------------------QPYNVS  315 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~-------------------~~~~~~  315 (423)
                      |..+.....    ....+.++++.|+||.++ .+|  +|++++++++++.+....                   .+++.+
T Consensus       183 ~~~~~~~~~----~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (376)
T 3f0h_A          183 SAFLADPFN----MNECGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPA  256 (376)
T ss_dssp             TTTTTSCCC----HHHHTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCC
T ss_pred             ccccCcccc----ccccCccEEEecCcccccCCCc--eEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCc
Confidence            986543211    112234588999999997 556  688899999988876422                   123455


Q ss_pred             HHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-CCceEEEEEeCCCCCHHHHHHHHHhC-CcEE
Q 014492          316 VAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVTSGMDAKKLKDDLAKM-GVMI  390 (423)
Q Consensus       316 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v  390 (423)
                      ...+.++.++++.   ...+++.+++++++++++.+.|++++ +.+.+ ...++++...+.+.+..++.+.|.++ ||.+
T Consensus       257 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v  335 (376)
T 3f0h_A          257 VGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP-FELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWI  335 (376)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS-EEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEEC
T ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEE
Confidence            5444445555442   22578889999999999999999886 33332 22333332224467899999999976 9999


Q ss_pred             EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          391 RHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       391 ~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +++.....++++||++.   +.++++++.++|++
T Consensus       336 ~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~  369 (376)
T 3f0h_A          336 CPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKD  369 (376)
T ss_dssp             EECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHH
T ss_pred             ecCccccCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            98854445789999985   45566666666654

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=1.4e-32  Score=271.16  Aligned_cols=318  Identities=14%  Similarity=0.100  Sum_probs=241.2

Q ss_pred             CCCCCeeEcCCCC-CCCCCCHHHHHHHhcC--CCC---CCC----CC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDANE-NPYGPPPEVREALGQL--KFP---YIY----PD-PESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~---~~Y----~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      .++++++||+.+. ..++++|++.+++.+.  .++   ..|    +. ....++++++++++|.+. .+++ +++++++.
T Consensus        56 ~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-~i~~-~sGt~a~~  133 (409)
T 3kki_A           56 QASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDE-CLLS-QSGWNANV  133 (409)
T ss_dssp             CCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSE-EEEE-SCHHHHHH
T ss_pred             CCCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCe-EEEe-cchHHHHH
Confidence            3467899998874 2356789998888762  111   111    11 235689999999999753 4555 45569999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                      .++.+++++||.|+++.|+|..+...++..|++++.++.     .|++++++.+.+.++++|++++|+||||.+++.+++
T Consensus       134 ~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l  208 (409)
T 3kki_A          134 GLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAEL  208 (409)
T ss_dssp             HHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHH
T ss_pred             HHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHH
Confidence            999999999999999999999999999999999999873     689999999975568999999999999999999999


Q ss_pred             HHHHcC-CCEEEEccCCccccCCCc---hhhhhcc-CCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----
Q 014492          241 LKILEM-PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----  311 (423)
Q Consensus       241 ~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----  311 (423)
                      .++|+. |++||+||+|..+.++..   .....+. .+.++++.|+||.++++|   ||+++++++++.+......    
T Consensus       209 ~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~~~~~~~~~~~~~~~~~  285 (409)
T 3kki_A          209 VNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVNRCVPFISYPAIFS  285 (409)
T ss_dssp             HHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGGGTHHHHCHHHHHS
T ss_pred             HHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECHHHHHHHHHhCcCcccc
Confidence            999998 999999999987543321   1122211 234588999999998665   9999999888777654332    


Q ss_pred             CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014492          312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIR  391 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~  391 (423)
                      ...++..+.++.++++..+..++.+++++++++++.+.|+++++ .+. +.++++|+.++...+..++.+.|.++||.+.
T Consensus       286 ~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~  363 (409)
T 3kki_A          286 STLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGL-TIR-SESQIIGLETGDERNTEKVRDYLESNGVFGS  363 (409)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTTC-CCC-CSSSEEEEEEESHHHHHHHHHHHHHTTEECE
T ss_pred             CCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC-ccC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEe
Confidence            24567777777777765444467888999999999999998864 333 5788999998754456789999998999998


Q ss_pred             eCCC---CCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          392 HYNN---KELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       392 ~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++..   +...+++||+++   +.++++++.++|++
T Consensus       364 ~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~  399 (409)
T 3kki_A          364 VFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSD  399 (409)
T ss_dssp             EECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             eeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHH
Confidence            7554   234679999997   45555555555543

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=1e-32  Score=270.46  Aligned_cols=311  Identities=15%  Similarity=0.213  Sum_probs=235.6

Q ss_pred             CCCCCeeEcCCCCCCCC---CCHHHHHHHhcC-C---CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K---FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~---~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..+++++|+..+.++..   .+|++.+++.+. .   +. ..|+++...++++.+++++|  ++++++++|+++++..++
T Consensus        33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~al  110 (392)
T 3ruy_A           33 PEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETAI  110 (392)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHHH
Confidence            45677899988755543   579999888762 2   11 22445567899999999998  689999999999999999


Q ss_pred             HHhcCC----------CCeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCCCHHHHHHHhhcCCce
Q 014492          164 RCVLDP----------GDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK  220 (423)
Q Consensus       164 ~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~  220 (423)
                      +.+..+          +|.|++..|+|+.+...+...+.             .+..++.     .|++++++.++ .+++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~  184 (392)
T 3ruy_A          111 KTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-----GDLEALKAAIT-PNTA  184 (392)
T ss_dssp             HHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-----TCHHHHHHHCC-TTEE
T ss_pred             HHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-----ccHHHHHHHhc-cCeE
Confidence            977644          67999999999766555544322             2444442     27999999997 7899


Q ss_pred             EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchh--hhhccCCcEEEEccChhhhcccC-ccc
Q 014492          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAG-LRV  292 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~g~~G-~R~  292 (423)
                      +|++++|+||||.+++    .+++.++|+. |+++|+||+|.+|...+...  ...+...+++   |+||.++ +| +|+
T Consensus       185 ~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---~~SK~l~-gG~~~~  260 (392)
T 3ruy_A          185 AFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMY---ILGKALG-GGVFPI  260 (392)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTTSCC
T ss_pred             EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEE---EEchhhh-CChhhh
Confidence            9999999999999998    8888888887 99999999998776543222  2222223433   6789875 46 999


Q ss_pred             cccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC--CCeecCCCceEEEE
Q 014492          293 GYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFILC  368 (423)
Q Consensus       293 G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~p~~~~~~~~  368 (423)
                      ||+++++++++.+.....  .++.+++++.++.++++..+. ++.+++++++++++.+.|++++  .+...++.++|+++
T Consensus       261 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~  339 (392)
T 3ruy_A          261 SCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEE-EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGI  339 (392)
T ss_dssp             EEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEE
T ss_pred             EEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEE
Confidence            999999998887765443  478899999999999875433 6778889999999999999874  33344556888888


Q ss_pred             EeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          369 EVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       369 ~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .+++  +..++.+.|.++||.+++++    ++++||+++   +.++++++.++|++
T Consensus       340 ~~~~--~~~~l~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~  389 (392)
T 3ruy_A          340 ELNE--PARPYCEQLKAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKA  389 (392)
T ss_dssp             EESS--CSHHHHHHHHTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             EEcc--hHHHHHHHHHHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            8874  77899999999999999876    689999944   45555555555554

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=4.6e-33  Score=275.80  Aligned_cols=322  Identities=13%  Similarity=0.100  Sum_probs=225.2

Q ss_pred             CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCC-C----CCCCCcchHHHHHHHHHHh-CCCCCcEEEeCCHHHHHHH
Q 014492           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDS-GLESDHILVGCGADELIDL  161 (423)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~-~----~~Y~~~g~~~lr~~ia~~~-g~~~~~i~~t~G~~~al~~  161 (423)
                      ..+.+++|+..+.+  +++ ++|++.+++.+ +.. .    ..|+..+..+|++++++++ +-.+++|++|+|+++++..
T Consensus        38 ~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~  117 (426)
T 1sff_A           38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVEN  117 (426)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHH
Confidence            34567899987754  555 67889998876 321 1    1246667889999999999 5224899999999999999


Q ss_pred             HHH---HhcCCCCeEEEcCCCchhhH-HHHHHCCCe-------------EEEecCCC-----CCCCCHHHHHHHhhc---
Q 014492          162 IMR---CVLDPGDKIVDCPPTFTMYE-FDAAVNGAA-------------VVKVPRKS-----DFSLNVELIADAVER---  216 (423)
Q Consensus       162 ~~~---~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~-------------~~~v~~~~-----~~~~d~~~l~~~i~~---  216 (423)
                      +++   .++++| .|++.+|+|+.+. ......|.+             ++.+|.+.     ++.+|++++++.+++   
T Consensus       118 ~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~  196 (426)
T 1sff_A          118 AVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAA  196 (426)
T ss_dssp             HHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccC
Confidence            988   677776 8999999997644 455556653             67777543     223689999998863   


Q ss_pred             -CCceEEEEc-CCCCCcC-cCCCHHHHHHH---HcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC
Q 014492          217 -EKPKCIFLT-SPNNPDG-SIINDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG  289 (423)
Q Consensus       217 -~~~~~i~l~-~p~NPtG-~~~~~~~l~~i---~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G  289 (423)
                       .++++|+++ +++| || .+++.+++++|   |+. |++||+||+|.+|.+.+... ..+..+..+.+.||||.+|. |
T Consensus       197 ~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~di~s~sK~~~~-G  273 (426)
T 1sff_A          197 PEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVAPDLTTFAKSIAG-G  273 (426)
T ss_dssp             GGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSCCSEEEECGGGGT-S
T ss_pred             CCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCCCCCEEEEcccccC-C
Confidence             467788875 6678 99 55565555555   444 99999999999876533211 11122222334499999996 9


Q ss_pred             ccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCc
Q 014492          290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYS  363 (423)
Q Consensus       290 ~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~  363 (423)
                      +|+||+++++++++.+...  ...++.+++++.++.++|+..+. +...++++++++++.+.|++    ++.+...++.|
T Consensus       274 lriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g  352 (426)
T 1sff_A          274 FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ-ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLG  352 (426)
T ss_dssp             SCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEET
T ss_pred             CceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE
Confidence            9999999999988776532  23467899999998887753211 23456667777777777755    44333233458


Q ss_pred             eEEEEEeC--------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          364 NFILCEVT--------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       364 ~~~~~~~~--------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      +|+|++++        .+.+..++.+.|.++||.++++..  .++++||+++   +.++++++.++|+
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~  418 (426)
T 1sff_A          353 AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIIS  418 (426)
T ss_dssp             TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECCccCCHHHHHHHHHHHH
Confidence            99999984        223567899999999999999764  2689999986   4555555555444

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=3.3e-32  Score=267.86  Aligned_cols=317  Identities=15%  Similarity=0.169  Sum_probs=240.1

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc----chH---HHH----HHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP----ESR---RLR----AALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~----g~~---~lr----~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      .++++|..+++++  +|.+.+++.+. .  ...+||+.    |.+   .++    +.+++++|.++++|++++|+. ++.
T Consensus        23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~-a~~   99 (407)
T 2dkj_A           23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQ-ANM   99 (407)
T ss_dssp             HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHH-HHH
T ss_pred             hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHH-HHH
Confidence            3579999999988  79999999873 2  23456543    222   233    488899998876777788765 999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhh---HHHHHHCCC--eEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMY---EFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      .+++.++++||+|+++.|+|+.+   ...++..|.  ..+.++.+ +++.+|++++++.+.+.++++|++++|+||  .+
T Consensus       100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~  177 (407)
T 2dkj_A          100 AVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RF  177 (407)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SC
T ss_pred             HHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CC
Confidence            99999999999999999999877   333444455  45555543 367899999999997447999999999997  78


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP  311 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~  311 (423)
                      .+.+++.++|+. |+++|+||+|.. +.+.+.......  ..++++.|+||.  ++|.|+||++++ +++++.+......
T Consensus       178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~--l~g~~~G~~~~~~~~~~~~l~~~~~~  253 (407)
T 2dkj_A          178 WDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP--YAHVVTSTTHKT--LRGPRGGLILSNDPELGKRIDKLIFP  253 (407)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT--TCSEEEEESSGG--GCCCSCEEEEESCHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc--cccEEEEecccc--CCCCCceEEEECCHHHHHHHHhhhcc
Confidence            899999999988 999999999987 432221111111  246889999994  468999999999 8999888776654


Q ss_pred             C---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCceEEEEEeCC-CCCHHHHHHHH
Q 014492          312 Y---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTS-GMDAKKLKDDL  383 (423)
Q Consensus       312 ~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~~~~~~~~~-~~~~~~l~~~L  383 (423)
                      +   +.+.....++.++++.  .+++++.+++++++++++.+.|++++ +.+.  ++.++|+|+++++ +.+..++.+.|
T Consensus       254 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  332 (407)
T 2dkj_A          254 GIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG-YRIVTGGTDNHLFLVDLRPKGLTGKEAEERL  332 (407)
T ss_dssp             TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-ceeecCCCCceEEEEECcccCCCHHHHHHHH
Confidence            3   3444444455666654  35778899999999999999999884 5544  5688999999974 45788999999


Q ss_pred             HhCCcEEEeCCC------CCCCCeEEEEe-------cChhhHHHHHHHHhh
Q 014492          384 AKMGVMIRHYNN------KELKGYVRVSV-------GKPEHTDALMECLMH  421 (423)
Q Consensus       384 ~~~gI~v~~~~~------~~~~~~iRis~-------~~~~~~~~l~~al~~  421 (423)
                      .++||.++++..      ...++++||++       .+.++++++.++|++
T Consensus       333 ~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~  383 (407)
T 2dkj_A          333 DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR  383 (407)
T ss_dssp             HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred             HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence            999999998753      22467999998       467777888777765

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=1.8e-32  Score=271.27  Aligned_cols=313  Identities=16%  Similarity=0.171  Sum_probs=222.2

Q ss_pred             CCCCCeeEcCCCC--CCCCC--CHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYGP--PPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~~--~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      ..+..++|+..+.  ++++.  +|++.+++.+ +...     ..|+++...++++.+++++|++ +++|++|+|+++++.
T Consensus        39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~  118 (419)
T 2eo5_A           39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIE  118 (419)
T ss_dssp             TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHH
Confidence            3456789998876  56765  6999998876 2211     2366655678999999999987 789999999999999


Q ss_pred             HHHHHhcC-CCCeEEEcCCCchhhHHH-HHHCC-------------CeEEEecCCCCCC----------------CCHHH
Q 014492          161 LIMRCVLD-PGDKIVDCPPTFTMYEFD-AAVNG-------------AAVVKVPRKSDFS----------------LNVEL  209 (423)
Q Consensus       161 ~~~~~l~~-~gd~Vl~~~p~y~~~~~~-~~~~g-------------~~~~~v~~~~~~~----------------~d~~~  209 (423)
                      .+++.+.. +||+|++..|+|+.+... ....|             ..++.+|.++++.                +|+++
T Consensus       119 ~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~  198 (419)
T 2eo5_A          119 ASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEF  198 (419)
T ss_dssp             HHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHH
Confidence            99987654 389999999999754433 22222             3577777654432                36889


Q ss_pred             HH-HHhhc----CCceEEEEcCC-CCCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEE
Q 014492          210 IA-DAVER----EKPKCIFLTSP-NNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLI  276 (423)
Q Consensus       210 l~-~~i~~----~~~~~i~l~~p-~NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i  276 (423)
                      ++ +.+++    .++++|+ ++| |||||.+. +   .+++.++|+. |+++|+||+|.+|...+.  ........++++
T Consensus       199 l~~~~i~~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~  277 (419)
T 2eo5_A          199 IEDYIFVNLVPPEEVAGIF-FEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI  277 (419)
T ss_dssp             HHHTHHHHTCCGGGEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred             HHHHHHhhccCCCCEEEEE-EeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE
Confidence            99 88863    2455555 555 56789755 5   4455555554 999999999998864332  122223334433


Q ss_pred             EEccChhhhcccC-ccccccccCHHHHHHHH-HhcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       277 ~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                         ||||.++ +| +|+||++++++++ .+. ....+++.+++++.++.++|+.   .++.+++++++++++.+.|+++ 
T Consensus       278 ---t~sK~~~-~G~~riG~~~~~~~~~-~~~~~~~~t~~~n~~~~~aa~aal~~---~~~~~~~~~~~~~~l~~~L~~~-  348 (419)
T 2eo5_A          278 ---TLAKALG-GGIMPIGATIFRKDLD-FKPGMHSNTFGGNALACAIGSKVIDI---VKDLLPHVNEIGKIFAEELQGL-  348 (419)
T ss_dssp             ---EECGGGG-TTTSCCEEEEEEGGGC-CC------CCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTS-
T ss_pred             ---Eeccccc-CCccceEEEEEchHhh-cCCcccCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHh-
Confidence               7999999 59 9999999998877 552 2234578899999999999864   2337888999999999999887 


Q ss_pred             CCeecCCCceEEEEEeC-CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          355 FLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       355 ~~~~~p~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                       +...++.|+|+++++. ...... +.+.|.++||.+++++    ++++||+++   +.++++++.++|+
T Consensus       349 -~~~~~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~  412 (419)
T 2eo5_A          349 -ADDVRGIGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILK  412 (419)
T ss_dssp             -SSEEEEETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             -hhheEeeeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence             3333567889999983 212345 8888889999999875    579999865   4555555555544

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=5.7e-32  Score=268.43  Aligned_cols=320  Identities=13%  Similarity=0.134  Sum_probs=227.6

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-C-CC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQL-K-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~-~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+..++|+..+.  ++++ .+|++.+++.+. . ..    .+|+.....++++++++++++++++|++|+|++++++.+
T Consensus        40 ~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~a  119 (429)
T 1s0a_A           40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA  119 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHH
Confidence            3456789998876  5666 579999888762 1 11    245555567899999999998889999999999999999


Q ss_pred             HHHhc---C----CCCeEEEcCCCchhhHHHHHH-C---------------CCeEEEecCC---CCC-CCCHHHHHHHhh
Q 014492          163 MRCVL---D----PGDKIVDCPPTFTMYEFDAAV-N---------------GAAVVKVPRK---SDF-SLNVELIADAVE  215 (423)
Q Consensus       163 ~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~-~---------------g~~~~~v~~~---~~~-~~d~~~l~~~i~  215 (423)
                      ++.+.   +    |||+|++..|+|+.+...+.. .               +...+.++..   +.+ .+|++++++.++
T Consensus       120 i~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~  199 (429)
T 1s0a_A          120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA  199 (429)
T ss_dssp             HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred             HHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHH
Confidence            98653   2    689999999999865443322 1               2344444321   133 489999999986


Q ss_pred             c--CCceEEEEcCC-CCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhh
Q 014492          216 R--EKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRA  285 (423)
Q Consensus       216 ~--~~~~~i~l~~p-~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~  285 (423)
                      +  .++++|+++.+ +||||.+.+    .+++.++|+. |+++|+||+|.+|...+.  .........+++   |+||.+
T Consensus       200 ~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~---t~sK~l  276 (429)
T 1s0a_A          200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL---CLGKAL  276 (429)
T ss_dssp             HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGG
T ss_pred             hCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE---Eecccc
Confidence            4  45666665444 699997665    5555566665 999999999998754332  122222233433   789999


Q ss_pred             cccC-ccccccccCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC---C
Q 014492          286 GLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV---P  354 (423)
Q Consensus       286 g~~G-~R~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~  354 (423)
                      + +| +|+||+++++++++.+...       ...++.|++++.++.++++..+- +...++++++++++.+.|+++   +
T Consensus       277 ~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~  354 (429)
T 1s0a_A          277 T-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES-GDWQQQVADIEVQLREQLAPARDAE  354 (429)
T ss_dssp             G-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHGGGGGCT
T ss_pred             c-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            8 68 9999999999999888763       23467899999988888863110 245677778888999888775   3


Q ss_pred             CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          355 FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       355 ~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .+...++.|+|+|++++++.+..++.+.|.++||.++++     .+++||+++   +.++++++.++|++
T Consensus       355 ~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~  419 (429)
T 1s0a_A          355 MVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNR  419 (429)
T ss_dssp             TEEEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CEEEEEEeeEEEEEEECCcccHHHHHHHHHHCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            333334567899999976567889999999999999875     279999954   55566666666554

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=9.2e-33  Score=274.25  Aligned_cols=325  Identities=14%  Similarity=0.097  Sum_probs=214.4

Q ss_pred             CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CC-CC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK-FP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~-~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..++.++|+..+  .++++. +|++.+++.+ +. ..    ..|+++...+++++++++++.++++|++|+|+++++..+
T Consensus        26 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a  105 (430)
T 3i4j_A           26 DAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESA  105 (430)
T ss_dssp             TTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHH
Confidence            345778999887  667765 8899888865 21 11    234555567899999999998889999999999999999


Q ss_pred             HHHhc--------CCCCeEEEcCCCchhhHHHHHHCCC---------------eEEEecCCCC---CCCCHHHHHHHhhc
Q 014492          163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGA---------------AVVKVPRKSD---FSLNVELIADAVER  216 (423)
Q Consensus       163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~v~~~~~---~~~d~~~l~~~i~~  216 (423)
                      ++.++        .+++.|++.+|+|+.+...+...+.               .+..+|.++.   ...|+++|++.+++
T Consensus       106 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~  185 (430)
T 3i4j_A          106 VKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLER  185 (430)
T ss_dssp             HHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHh
Confidence            99876        3478999999999877765544333               2233332222   12366888888863


Q ss_pred             ---CCceEEEEcCCCC-CcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhh-ccCCcEEEEccChhh
Q 014492          217 ---EKPKCIFLTSPNN-PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKR  284 (423)
Q Consensus       217 ---~~~~~i~l~~p~N-PtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~  284 (423)
                         .++++|+++.++| ++|...+    .+++.++|+. |++||+||+|.+|...+..  .... +..++   +.+|||.
T Consensus       186 ~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~d---i~t~sK~  262 (430)
T 3i4j_A          186 EGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPD---IAVLGKG  262 (430)
T ss_dssp             HCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCS---EEEECGG
T ss_pred             cCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCc---EEEEccc
Confidence               3455666556667 8998665    5556666666 9999999999988654322  1222 22233   3368999


Q ss_pred             hcccC-ccccccccCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          285 AGLAG-LRVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       285 ~g~~G-~R~G~i~~~~~~~~~l~~~------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      ++ +| +|+||+++++++++.+.+.      ..+++.+++++.++.++|+.   +++.++.++..+..++.+.+.+++++
T Consensus       263 l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  341 (430)
T 3i4j_A          263 LA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFP  341 (430)
T ss_dssp             GT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cc-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            98 59 9999999999999999863      34578899999999998874   34455555555555566666555666


Q ss_pred             CCeecCCCceEEEEEeCCC---------CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHH
Q 014492          355 FLNPYPSYSNFILCEVTSG---------MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECL  419 (423)
Q Consensus       355 ~~~~~p~~~~~~~~~~~~~---------~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al  419 (423)
                      .+...++.|+|+++.+++.         ....++++.|.++||.++++..   ...++++||+++   +.++++++.++|
T Consensus       342 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l  421 (430)
T 3i4j_A          342 QMMQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALL  421 (430)
T ss_dssp             TEEEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CeEEEEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence            6665667788999988521         1236789999999999998732   223679999976   344444444444


Q ss_pred             h
Q 014492          420 M  420 (423)
Q Consensus       420 ~  420 (423)
                      +
T Consensus       422 ~  422 (430)
T 3i4j_A          422 A  422 (430)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=2.7e-32  Score=267.66  Aligned_cols=312  Identities=17%  Similarity=0.167  Sum_probs=232.4

Q ss_pred             CCCCeeEcCCCC--CCCC-CCHHHHHHHhcC----CC-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           93 KPEDIVKIDANE--NPYG-PPPEVREALGQL----KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        93 ~~~~~i~l~~~~--~~~~-~~~~v~~al~~~----~~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      .+..++|++.+.  ++++ ++|.+.+++.+.    .. ...|+.+...++++++++++++++++|++|+|+++++..+++
T Consensus        43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~  122 (395)
T 1vef_A           43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALK  122 (395)
T ss_dssp             TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHH
Confidence            456789998875  6776 789998888762    11 123566667899999999998888899999999999999998


Q ss_pred             Hhc--CCCCeEEEcCCCchh-hHHHHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492          165 CVL--DPGDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN  229 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (423)
                      ++.  .+||.|++.+|+|+. +...++..|.+            +..++     ..|++++++.++ .++++|++++++|
T Consensus       123 ~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~-----~~d~~~l~~~i~-~~~~~v~~~~~~~  196 (395)
T 1vef_A          123 FARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIP-----YNDVEALKRAVD-EETAAVILEPVQG  196 (395)
T ss_dssp             HHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEEC-----TTCHHHHHHHCC-TTEEEEEECSEET
T ss_pred             HHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeC-----CCcHHHHHHHhc-cCEEEEEEeCccC
Confidence            764  578999999999964 44455666765            33333     248999999997 6889988877789


Q ss_pred             CcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492          230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (423)
Q Consensus       230 PtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~  302 (423)
                      |||.+++    .+++.++|+. |++||+||+|.++...+..  ....+...+++   ||||.++. |+|+||++++++++
T Consensus       197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~~~~  272 (395)
T 1vef_A          197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL---TLAKALGG-GVPLGVAVMREEVA  272 (395)
T ss_dssp             TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGGT-TSSCEEEEEEHHHH
T ss_pred             CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE---EEcccccC-CCceEEEEehHHHH
Confidence            9999876    6667777776 9999999999976533221  22222233433   78999995 99999999999887


Q ss_pred             HHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--CeecCCCceEEEEEeCCCCCHHH
Q 014492          303 EYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDAKK  378 (423)
Q Consensus       303 ~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~~~~~~~~~~~~~~~  378 (423)
                      +.+..  ....++.+++++.++.++++..+. +...++++++++++.+.|++++.  +...++.++|+|+++++  +..+
T Consensus       273 ~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~--~~~~  349 (395)
T 1vef_A          273 RSMPKGGHGTTFGGNPLAMAAGVAAIRYLER-TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE--KAAP  349 (395)
T ss_dssp             HTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS--CSHH
T ss_pred             hhhccCCcCCCcCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC--hHHH
Confidence            76654  233467889999888888864332 45678888999999999988754  12234567899999974  3678


Q ss_pred             HHHHHH-hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          379 LKDDLA-KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       379 l~~~L~-~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +.+.|. ++||.+++++    ++++||+++   +.++++++.++|++
T Consensus       350 l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~  392 (395)
T 1vef_A          350 YIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRA  392 (395)
T ss_dssp             HHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            999999 9999999864    689999875   44455555555543

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=100.00  E-value=2.5e-31  Score=259.32  Aligned_cols=312  Identities=15%  Similarity=0.100  Sum_probs=237.2

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCC----CCCcEEEeCCHHHHHHHHHHHhc---C
Q 014492           98 VKIDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGL----ESDHILVGCGADELIDLIMRCVL---D  168 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~----~~~~i~~t~G~~~al~~~~~~l~---~  168 (423)
                      +.|..  .+.+.++++.+++.+....+++|..  ...+++++++++++.    ++++|++|+|+++++..++.+++   +
T Consensus         7 ~~~~p--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~   84 (385)
T 2bkw_A            7 TLLIP--GPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKA   84 (385)
T ss_dssp             EECSS--SSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTC
T ss_pred             eeecC--CCcCchHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCC
Confidence            55554  4566789999999874332334432  356788999998864    46899999999999999999987   8


Q ss_pred             CCCeEEEc-CCCchhh-HHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492          169 PGDKIVDC-PPTFTMY-EFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (423)
Q Consensus       169 ~gd~Vl~~-~p~y~~~-~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~  245 (423)
                      +||+|++. .|.|..+ ...++..|++++.+|. +.++.+|++++++++++.++++|++++|+||||.+++.+++.++|+
T Consensus        85 ~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~  164 (385)
T 2bkw_A           85 PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIK  164 (385)
T ss_dssp             SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred             CCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHH
Confidence            99999877 5566655 3667789999999998 7777899999999997447999999999999999999999999998


Q ss_pred             C---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHH-HHH--------------
Q 014492          246 M---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIE-YLW--------------  306 (423)
Q Consensus       246 ~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~-~l~--------------  306 (423)
                      .   |+++|+||+|..... +  .. +...+.++++.|+||.++ .+|  +||++++++.++ .+.              
T Consensus       165 ~~~~~~~li~D~a~~~~~~-~--~~-~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~  238 (385)
T 2bkw_A          165 QTSPETFFVVDAVCSIGCE-E--FE-FDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSL  238 (385)
T ss_dssp             HHCTTSEEEEECTTTTTTS-C--CC-TTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCH
T ss_pred             hhCCCCEEEEECccccCCc-c--cc-ccccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecH
Confidence            5   899999999974321 1  11 223345688999999654 566  499999988776 431              


Q ss_pred             --------HhcC-----CCCCcHHHHHHHHHHhCCh-HH-HHHHHHHHHHHHHHHHHHH-ccCCCCeecC------CCce
Q 014492          307 --------RAKQ-----PYNVSVAAEVAACAALQNP-IY-LEKVKEALIKERERLFKLL-KDVPFLNPYP------SYSN  364 (423)
Q Consensus       307 --------~~~~-----~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~l~~~L-~~~~~~~~~p------~~~~  364 (423)
                              ....     .++.+..++.++..+++.. ++ +++.+++++++++++.+.| ++++ +.+.+      ..++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~  317 (385)
T 2bkw_A          239 RRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ-LTSVSRYPSNMSAHG  317 (385)
T ss_dssp             HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC-CEESSCSSSTTBCSS
T ss_pred             HHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC-ceecccCcccccCCc
Confidence                    1111     2467777777777777642 23 6778889999999999999 8884 55442      2478


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE-ec------ChhhHHHHHHHHhh
Q 014492          365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS-VG------KPEHTDALMECLMH  421 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis-~~------~~~~~~~l~~al~~  421 (423)
                      ++++.+++   ..++.+.|.++||.++++..+ ...+++||+ ++      +.++++++.++|++
T Consensus       318 ~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~  379 (385)
T 2bkw_A          318 LTAVYVAD---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKL  379 (385)
T ss_dssp             CEEEECSC---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHH
T ss_pred             eEEEecCC---HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHH
Confidence            89999873   788999999999999987652 346799999 65      56667777777664

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=2.7e-33  Score=274.97  Aligned_cols=316  Identities=16%  Similarity=0.060  Sum_probs=225.8

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C----CCC-CCC-----CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K----FPY-IYP-----DPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~-~Y~-----~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+.++|+.+.+. ++++++.+++.+. .    ... .|.     .....++++++++++|+++++|++|+|+++++.++
T Consensus        18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~   96 (400)
T 3vax_A           18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIA   96 (400)
T ss_dssp             ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHH
T ss_pred             cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHH
Confidence            3556888887765 6678888888762 1    111 111     12256899999999999889999999999999999


Q ss_pred             HHHhc----CCCC-eEEEcCCCchhhHHHHHH---CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          163 MRCVL----DPGD-KIVDCPPTFTMYEFDAAV---NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       163 ~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      +++++    ++|| .|+++.++|+.+...+..   .|++++.+|.+.++.+|++++++++. +++++|++++|+||||.+
T Consensus        97 ~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~nptG~~  175 (400)
T 3vax_A           97 LLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-PDTLLVSLMHVNNETGVI  175 (400)
T ss_dssp             HHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC-TTEEEEECCSBCTTTCBB
T ss_pred             HHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC-CCceEEEEECCCCCceee
Confidence            99887    8999 999999999877655544   69999999988888899999999997 689999999999999999


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccc-cCH-HHH---HHHHH-
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPL-SII---EYLWR-  307 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~-~~~-~~~---~~l~~-  307 (423)
                      ++.++|.++|+. |+++|+||+|.....   .. .+... ..+++.|+||.+|.+|  +|+++ +++ ++.   ..+.. 
T Consensus       176 ~~l~~i~~la~~~~~~li~D~a~~~~~~---~~-~~~~~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~  248 (400)
T 3vax_A          176 QPVAELAQQLRATPTYLHVDAAQGYGKV---PG-DLTTP-IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPI  248 (400)
T ss_dssp             CCHHHHHHHHTTSSCEEEEECTTTTTTS---GG-GGGSC-CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCS
T ss_pred             CcHHHHHHHHHhcCCEEEEEhhhhcCCC---Cc-Chhhc-CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCce
Confidence            999999999998 999999999984332   11 12222 4588999999777656  56666 544 111   11111 


Q ss_pred             --------hcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ceEEEEEeCCCC
Q 014492          308 --------AKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SNFILCEVTSGM  374 (423)
Q Consensus       308 --------~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~~~~~~~~~~~  374 (423)
                              ....++.+...+.++..+++. .+++++.+++++++++++.+.|+ .+++.+.+..    ++++++.++ +.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~-~~  326 (400)
T 3vax_A          249 MFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFE-DV  326 (400)
T ss_dssp             SCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECT-TC
T ss_pred             ecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeC-CC
Confidence                    112345677777777676654 34578899999999999999998 7666654333    367888887 57


Q ss_pred             CHHHHHHHHHhCCcEEEeCCCC--------------CC-----CCeEEEEe-c---ChhhHHHHHHHHhh
Q 014492          375 DAKKLKDDLAKMGVMIRHYNNK--------------EL-----KGYVRVSV-G---KPEHTDALMECLMH  421 (423)
Q Consensus       375 ~~~~l~~~L~~~gI~v~~~~~~--------------~~-----~~~iRis~-~---~~~~~~~l~~al~~  421 (423)
                      +.+++.+.|. +||.++++..+              +.     ++++||++ +   +.++++++.++|++
T Consensus       327 ~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~  395 (400)
T 3vax_A          327 DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK  395 (400)
T ss_dssp             CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred             CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence            8899999999 99998876421              11     48999999 6   34455556655554

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=100.00  E-value=2.7e-32  Score=270.90  Aligned_cols=316  Identities=19%  Similarity=0.117  Sum_probs=220.0

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcc----------hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPE----------SRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g----------~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      .+.++|+.+.+. ++++.+++++.+. ....+||...          ..++|+++++++|+++++|++|+|+++++..++
T Consensus        17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~   95 (432)
T 3a9z_A           17 NRKVYMDYNATT-PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVI   95 (432)
T ss_dssp             -CCEECBTTTCC-CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHH
T ss_pred             CCcEEeeCCccC-CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHH
Confidence            456899998887 6789999888762 2223444322          358999999999998899999999999999999


Q ss_pred             HHhc--------CCCCeEEEcCCCchhh-----------------HHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcC
Q 014492          164 RCVL--------DPGDKIVDCPPTFTMY-----------------EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVERE  217 (423)
Q Consensus       164 ~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~  217 (423)
                      .+++        ++||+|+++.|+|..+                 ...++..|++++.+|.+. ++.+|++++++++. .
T Consensus        96 ~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~-~  174 (432)
T 3a9z_A           96 HSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVR-P  174 (432)
T ss_dssp             HHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCC-T
T ss_pred             HHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhcc-C
Confidence            9886        5899999999999765                 344556799999999764 66799999999997 6


Q ss_pred             CceEEEEcCCCCCcCcCCCHHHHHHHHcC-C----------CEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492          218 KPKCIFLTSPNNPDGSIINDEDLLKILEM-P----------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       218 ~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~----------~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      ++++|++++|+||||.+++.+++.++|+. +          +++|+||+|..+..... ...  ... .+++.|+||.+ 
T Consensus       175 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~--~~~-d~~~~s~~K~~-  249 (432)
T 3a9z_A          175 TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED--LGV-DFLTIVGHKFY-  249 (432)
T ss_dssp             TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH--HCC-SEEEEEGGGTT-
T ss_pred             CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh--cCC-CEEEEehhHhc-
Confidence            89999999999999999999999999987 7          99999999986532111 111  122 26689999966 


Q ss_pred             ccCccccccccCHHH-HHHHH---------HhcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          287 LAGLRVGYGAFPLSI-IEYLW---------RAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       287 ~~G~R~G~i~~~~~~-~~~l~---------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                        |.|+||++++++. ...+.         +....++.+..++.++.++++. .+++++.+++++++++++.+.|+++.+
T Consensus       250 --g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g  327 (432)
T 3a9z_A          250 --GPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFG  327 (432)
T ss_dssp             --CCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --CCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence              4569999998765 22222         1123356788888777777764 456788899999999999999987532


Q ss_pred             Cee---cC-----CCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC---------------CCC-----CCeEEEEe
Q 014492          356 LNP---YP-----SYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN---------------KEL-----KGYVRVSV  406 (423)
Q Consensus       356 ~~~---~p-----~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~---------------~~~-----~~~iRis~  406 (423)
                      ..+   .+     ..+..+++.+++ +.+..++.+.+  .++.++.+..               .+.     .+++||++
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~  405 (432)
T 3a9z_A          328 KRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSV  405 (432)
T ss_dssp             GGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEEC
T ss_pred             CcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEc
Confidence            222   12     123456666764 34566676655  3666665422               111     37999999


Q ss_pred             c---ChhhHHHHHHHHhh
Q 014492          407 G---KPEHTDALMECLMH  421 (423)
Q Consensus       407 ~---~~~~~~~l~~al~~  421 (423)
                      +   +.++++++.++|++
T Consensus       406 ~~~~t~eei~~~~~~l~~  423 (432)
T 3a9z_A          406 GRSTTRAEVDLIVQDLKQ  423 (432)
T ss_dssp             CTTCCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHH
Confidence            8   56677777776654

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=4.6e-32  Score=262.21  Aligned_cols=310  Identities=13%  Similarity=0.056  Sum_probs=235.9

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhc----CC--CCCCCCCc--chHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhc
Q 014492           97 IVKIDANENPYGPPPEVREALGQ----LK--FPYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVL  167 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~----~~--~~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~  167 (423)
                      .+.|..  .+.+.++++.+++.+    -.  ..+.|+..  ...++++.+++++|.+ +++|++|+|+++++.+++.+++
T Consensus         5 ~~~~~p--~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~   82 (362)
T 3ffr_A            5 KIYFTP--GPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV   82 (362)
T ss_dssp             CEEECS--SSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC
T ss_pred             ceeccC--CCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc
Confidence            355544  455566777755543    11  12233332  2467899999999884 6789999999999999999999


Q ss_pred             CCCCeEEEcCCCch-hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492          168 DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (423)
Q Consensus       168 ~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~  246 (423)
                      ++ +.+++..+.|. .+...++..|++++.++.++++.+|+++++  +. +++++|++++|+||||.+++.+++.++|+.
T Consensus        83 ~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~  158 (362)
T 3ffr_A           83 EK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP-ADAEIICLTHNETSSGVSMPVEDINTFRDK  158 (362)
T ss_dssp             SS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-TTCCEEEEESEETTTTEECCHHHHTTSGGG
T ss_pred             CC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-CCccEEEEEcCCCCcceeCCHHHHHHHHHh
Confidence            88 55666666666 334566778999999998878899999998  54 789999999999999999999999999974


Q ss_pred             --CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhcC-------------
Q 014492          247 --PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQ-------------  310 (423)
Q Consensus       247 --~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~-------------  310 (423)
                        |+++|+|++|..+..... .     ....+++.|+||.++ ++|  +|++++++++++++.....             
T Consensus       159 ~p~~~li~D~a~~~~~~~~~-~-----~~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~  230 (362)
T 3ffr_A          159 NKDALIFVDAVSSLPYPKFD-W-----TKIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKSIGTYHTIPS  230 (362)
T ss_dssp             STTSEEEEECTTTTTSSCCC-T-----TSCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHH
T ss_pred             CCCCEEEEecccccCCcccC-h-----hHCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCCCcccccHHH
Confidence              899999999986542211 1     113488999999998 677  5778889998887776542             


Q ss_pred             ----------CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-----CCceEEEEEeCCC
Q 014492          311 ----------PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-----SYSNFILCEVTSG  373 (423)
Q Consensus       311 ----------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~~~~~~~~~~  373 (423)
                                .++.+..++.++..+++.  ...+++.+++++++++++.+.|++++++.+.+     ..+.++++.+++ 
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-  309 (362)
T 3ffr_A          231 MLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-  309 (362)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-
T ss_pred             HHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-
Confidence                      456777777777777753  22267888999999999999999986666544     235678888875 


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                       +..++.+.|.++||.++++..+..++++||+++   +.++++++.++|+++
T Consensus       310 -~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~  360 (362)
T 3ffr_A          310 -LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK  360 (362)
T ss_dssp             -CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence             889999999988999998765556789999987   566777777777764

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=3.1e-32  Score=267.50  Aligned_cols=311  Identities=14%  Similarity=0.130  Sum_probs=230.4

Q ss_pred             CCCCeeEcCCC--CCCCC-CCHHHHHHHhcC-C---C-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           93 KPEDIVKIDAN--ENPYG-PPPEVREALGQL-K---F-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~---~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      .+..++|++.+  .++++ ++|++.+++.+. .   . ...|+.+...++++.+++++|  +++|++++|+++++..+++
T Consensus        38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~  115 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIK  115 (397)
T ss_dssp             TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHH
T ss_pred             CCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHH
Confidence            45678899876  35555 478888888762 1   1 123554557889999999998  5799999999999999999


Q ss_pred             HhcC------C-CCeEEEcCCCchh-hHHHHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEEEE
Q 014492          165 CVLD------P-GDKIVDCPPTFTM-YEFDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCIFL  224 (423)
Q Consensus       165 ~l~~------~-gd~Vl~~~p~y~~-~~~~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l  224 (423)
                      .+..      + ++.|++.+|+|+. +...++..|.+            ++.+|.     .|++++++.++ +++++|++
T Consensus       116 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~~  189 (397)
T 2ord_A          116 IARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-----NNVEDLRRKMS-EDVCAVFL  189 (397)
T ss_dssp             HHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-----TCHHHHHHHCC-TTEEEEEE
T ss_pred             HHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-----CCHHHHHHHhh-cCeEEEEE
Confidence            8763      5 4789999999964 44466777776            777774     28999999997 68999999


Q ss_pred             cCCCCCcCc-CCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492          225 TSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       225 ~~p~NPtG~-~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      ++|+||||. +++.+++++|++.    |+++|+||+|.++.+.+..  ....+...+++   ||||.++ +|+|+||+++
T Consensus       190 ~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~r~G~~~~  265 (397)
T 2ord_A          190 EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL---TTAKGLG-GGVPIGAVIV  265 (397)
T ss_dssp             CSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEEEE
T ss_pred             ecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee---eeccccC-CCcCeEEEEE
Confidence            999999999 8888888877664    9999999999977643322  22233223333   7899999 8999999999


Q ss_pred             CHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEEEEEeC
Q 014492          298 PLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVT  371 (423)
Q Consensus       298 ~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~~~~~~  371 (423)
                      +++++ .+..  ....++.+++++.++.++|+..+. ++.+++++++++++.+.|+++    +.+...++.++|++++++
T Consensus       266 ~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~  343 (397)
T 2ord_A          266 NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK-EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFR  343 (397)
T ss_dssp             CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC
T ss_pred             chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEEC
Confidence            88876 5542  223467889999888888864222 456778888888888888764    322223456789999998


Q ss_pred             CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          372 SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       372 ~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +..+..++.+.|.++||.+++++    ++++||+++   +.++++++.++|++
T Consensus       344 ~~~~~~~l~~~l~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~  392 (397)
T 2ord_A          344 EEVSNREVATKCFENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKK  392 (397)
T ss_dssp             TTSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHH
Confidence            65678999999999999999874    679999954   45555555555543

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=100.00  E-value=5.3e-31  Score=254.32  Aligned_cols=311  Identities=16%  Similarity=0.141  Sum_probs=228.9

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcCCC--CCCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQLKF--PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG  170 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~g  170 (423)
                      .+++|||+.+ ++.+++|++.+++.+...  ...|+ ++...++++.+++++| .+++|++|+|+++++..++..++++|
T Consensus         6 ~~~~id~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~~~g   83 (356)
T 1v72_A            6 RPPALGFSSD-NIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMTPPW   83 (356)
T ss_dssp             CCCCCBCSCG-GGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSCCTT
T ss_pred             CCceEeeccC-CccCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhcCCC
Confidence            3567999986 456778999999987432  34564 3456789999999999 55569999999999999999999999


Q ss_pred             CeEEEcCCCchhhHHH--HHHC--CCeEEEecCCCCCCCCHHHHHH-HhhcC------CceEEEEcCCCCCcCcCCCHHH
Q 014492          171 DKIVDCPPTFTMYEFD--AAVN--GAAVVKVPRKSDFSLNVELIAD-AVERE------KPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       171 d~Vl~~~p~y~~~~~~--~~~~--g~~~~~v~~~~~~~~d~~~l~~-~i~~~------~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      |.|+++.|+|..+...  ++..  |++++.+|.+ ++.+|++++++ .+.+.      ++++|++++|+| ||.+++.++
T Consensus        84 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~  161 (356)
T 1v72_A           84 GNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDE  161 (356)
T ss_dssp             EEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHH
T ss_pred             CEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHH
Confidence            9999999999765443  5555  9999999975 46899999999 88641      689999999987 999999888


Q ss_pred             HHHHHcC----CCEEEEccCCccccC--CCchhhhh--ccCCcEEEEccChhhhcccCcccc--ccccCHHHHHHHHHhc
Q 014492          240 LLKILEM----PILVVLDEAYTEFSG--LESRMEWV--KKHDNLIVLRTFSKRAGLAGLRVG--YGAFPLSIIEYLWRAK  309 (423)
Q Consensus       240 l~~i~~~----~~~li~Deay~~~~~--~~~~~~~~--~~~~~~i~i~S~SK~~g~~G~R~G--~i~~~~~~~~~l~~~~  309 (423)
                      +++|++.    |+++|+|++|..+..  .+......  ..... +++.|+||. |   .|+|  |+++++++++++....
T Consensus       162 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~-g---~~~G~g~~~~~~~~~~~~~~~~  236 (356)
T 1v72_A          162 IEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD-ALSFGATKN-G---VLAAEAIVLFNTSLATEMSYRR  236 (356)
T ss_dssp             HHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCC-EEEECCGGG-T---CSSCEEEEESSGGGHHHHHHHH
T ss_pred             HHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCC-EEEEecccC-C---CcCccEEEEECHHHHhhHHHHh
Confidence            8877664    999999999975421  11111111  11222 445689996 3   3556  8888988887765442


Q ss_pred             C---C-CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHH
Q 014492          310 Q---P-YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       310 ~---~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      .   . ...+..++.++...+++ +.+.+..++++++++++.+.|++++++.+ .|..++|+|++++     .++.+.|.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~l~  310 (356)
T 1v72_A          237 KRAGHLSSKMRFLSAQIDAYLTD-DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----SAMIDALL  310 (356)
T ss_dssp             HHTTCCCSSTHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----HHHHHHHH
T ss_pred             hccCchhhhHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----HHHHHHHH
Confidence            1   1 12233444445566665 33455677788999999999988755554 5788899999986     37899999


Q ss_pred             hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          385 KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       385 ~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ++||.++++. ++ ++++||+++   +.++++++.++|++
T Consensus       311 ~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~  348 (356)
T 1v72_A          311 KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRL  348 (356)
T ss_dssp             HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            9999999866 33 789999986   45566666666654

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=2.2e-31  Score=261.97  Aligned_cols=311  Identities=16%  Similarity=0.215  Sum_probs=230.2

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..+++++|+..+  .++++ .+|++.+++.+ +..    ...|+++...++++.++++++.  ++|++|+|+++++..++
T Consensus        36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~v~~~~gg~~a~~~al  113 (406)
T 4adb_A           36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANEAAL  113 (406)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSC--SEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCC--CeEEEeCcHHHHHHHHH
Confidence            456778999877  34454 47888888876 221    1345666678999999999985  49999999999999999


Q ss_pred             HHhcC-------CC-CeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492          164 RCVLD-------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPKCI  222 (423)
Q Consensus       164 ~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (423)
                      +.++.       +| |.|++.+|+|+.+...+...+.             .+..+|.     .|++++++.+. .++++|
T Consensus       114 ~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v  187 (406)
T 4adb_A          114 KLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALID-DSTCAV  187 (406)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCS-TTEEEE
T ss_pred             HHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhc-CCeEEE
Confidence            98765       66 9999999999877655544443             3444442     47999999997 789999


Q ss_pred             EEcCCCCCcCcCC--CHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccc
Q 014492          223 FLTSPNNPDGSII--NDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       223 ~l~~p~NPtG~~~--~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      +++ |+||||.++  +.+++++|++.    |++||+||+|.+|...+..  ....+...+++   ||||.++ +|+|+||
T Consensus       188 ~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~r~G~  262 (406)
T 4adb_A          188 IVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL---TTAKALG-GGFPVGA  262 (406)
T ss_dssp             EEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEE
T ss_pred             EEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE---Eechhhc-CCCCeEE
Confidence            988 999999988  77777666553    9999999999977654332  22333344444   6799999 9999999


Q ss_pred             cccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCCceEEEE
Q 014492          295 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP----FLNPYPSYSNFILC  368 (423)
Q Consensus       295 i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~~~~~~~  368 (423)
                      +++++++++.+....  ..++.+++++.++.++|+..+. ++..++++++++++.+.|+++.    .....++.++++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~  341 (406)
T 4adb_A          263 LLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT-PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGC  341 (406)
T ss_dssp             EEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEE
T ss_pred             EEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEE
Confidence            999999988876554  3467899999999888864221 5677778888888888887642    22223456889999


Q ss_pred             EeCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          369 EVTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       369 ~~~~~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      .+++..  +..++.+.|.++||.+++++    ++++||+++   +.++++++.++|+
T Consensus       342 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~  394 (406)
T 4adb_A          342 VLNADYAGQAKQISQEAAKAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA  394 (406)
T ss_dssp             EECTTTTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHHHCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence            997543  68899999999999999875    689999654   3444444444443

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.98  E-value=3.7e-31  Score=259.68  Aligned_cols=316  Identities=16%  Similarity=0.149  Sum_probs=228.6

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC-CC---CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PY---IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~---~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..+++++||..|  .++++ .+|++.+++.+ +.. .+   .|+++...++++++++++|  +++|++++|+++++..++
T Consensus        33 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al  110 (395)
T 3nx3_A           33 DKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAM  110 (395)
T ss_dssp             TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHH
Confidence            456789999988  67776 47899988876 222 12   2455557789999999998  589999999999999999


Q ss_pred             HHhc-------CCCCeEEEcCCCchhhHHHHHHCC-------------CeEEEecCCCCCCCCHHHHHHHhhcCCceEEE
Q 014492          164 RCVL-------DPGDKIVDCPPTFTMYEFDAAVNG-------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIF  223 (423)
Q Consensus       164 ~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~  223 (423)
                      +.+.       .+++.|++.+|+|+.+...+...+             ..+..+|.     .|++++++.++ +++++|+
T Consensus       111 ~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~~~v~  184 (395)
T 3nx3_A          111 KTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-----NDISSVEKLVN-EKTCAII  184 (395)
T ss_dssp             HHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-----TCHHHHHTTCC-TTEEEEE
T ss_pred             HHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-----CCHHHHHHhcc-CCeEEEE
Confidence            8765       357999999999986654443322             34555552     27999999997 6889999


Q ss_pred             EcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC
Q 014492          224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP  298 (423)
Q Consensus       224 l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~  298 (423)
                      +++++|++|.+.+    .+++.++|+. |+++|+||+|.+|...+.... ....+....+.|+||.++ +|+|+||++++
T Consensus       185 ~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~-~~~~~~~~d~~t~sK~~~-~G~~~G~~~~~  262 (395)
T 3nx3_A          185 LESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFA-YEHAQILPDIMTSAKALG-CGLSVGAFVIN  262 (395)
T ss_dssp             EESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGGTCCCSEEEECGGGT-TTSCCEEEEEC
T ss_pred             EeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchh-HHhcCCCCCEEEeccccc-CCCceEEEEEc
Confidence            8888888898765    5555566665 999999999998764332111 111121222447899998 59999999999


Q ss_pred             HHH-HHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC
Q 014492          299 LSI-IEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS  372 (423)
Q Consensus       299 ~~~-~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~  372 (423)
                      +++ ++.+....  ..++.+++++.++.++|+.   +++.++.++..+..++.+.+.+.+++.+...++.++|+++.+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~  342 (395)
T 3nx3_A          263 QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDK  342 (395)
T ss_dssp             HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECT
T ss_pred             hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCC
Confidence            998 77775543  3477899999999888863   34455555555555556655555566555556778999999986


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ..+..++.+.|.++||.+++++    ++++||+++   +.++++++.++|++
T Consensus       343 ~~~~~~~~~~l~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~  390 (395)
T 3nx3_A          343 SVKVAKVIQKCQENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRK  390 (395)
T ss_dssp             TSCHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            6678999999999999999875    689999854   44555555555543

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.98  E-value=2.1e-31  Score=264.72  Aligned_cols=324  Identities=16%  Similarity=0.123  Sum_probs=221.1

Q ss_pred             CCCCCeeEcCCCCC--CCCC-CHHHHHHHhcC-C----CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANEN--PYGP-PPEVREALGQL-K----FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~~-~~~v~~al~~~-~----~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..++.++|+..+.+  +++. +|++.+++.+. .    ...+|+.....++++.++++++.++++|++|+|+++++..++
T Consensus        40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~  119 (433)
T 1zod_A           40 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAI  119 (433)
T ss_dssp             TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHH
T ss_pred             CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHH
Confidence            34567889876643  5553 78898888652 1    123566555678999999999988899999999999999999


Q ss_pred             HHhc--CCCCeEEEcCCCchhhHHHHHHC--------------CCeEEEecCC--CCCC--------CCHHHHHHHhhc-
Q 014492          164 RCVL--DPGDKIVDCPPTFTMYEFDAAVN--------------GAAVVKVPRK--SDFS--------LNVELIADAVER-  216 (423)
Q Consensus       164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~--------------g~~~~~v~~~--~~~~--------~d~~~l~~~i~~-  216 (423)
                      +.+.  ..++.|++.+|+|+.+...+...              |+..+.+|..  ..++        +|++++++.+++ 
T Consensus       120 ~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~  199 (433)
T 1zod_A          120 RMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ  199 (433)
T ss_dssp             HHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc
Confidence            8653  23578999999997655433321              3344433321  1122        369999999864 


Q ss_pred             --CCceEEEEcCCCCCcCcCC-C---HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcc
Q 014492          217 --EKPKCIFLTSPNNPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       217 --~~~~~i~l~~p~NPtG~~~-~---~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~  287 (423)
                        .++++|+++..+||||.+. +   .+++.++|+. |+++|+||+|.+|...+.  .........+   +.||||.|+.
T Consensus       200 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~d---i~s~sK~~~~  276 (433)
T 1zod_A          200 SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPD---ILTLSKTLGA  276 (433)
T ss_dssp             CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECHHHHT
T ss_pred             CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCC---EEEecccccC
Confidence              4566666544468899755 4   5555566665 999999999998764332  1222222333   3489999994


Q ss_pred             cCccccccccCHHHHHHHHHh--c--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeec
Q 014492          288 AGLRVGYGAFPLSIIEYLWRA--K--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPY  359 (423)
Q Consensus       288 ~G~R~G~i~~~~~~~~~l~~~--~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~  359 (423)
                       |+|+||+++++++++.+...  .  ..++.+++++.++.++|+..+- +...++++++++++.+.|++    ++.+...
T Consensus       277 -G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~  354 (433)
T 1zod_A          277 -GLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR-DGLVARANVMGDRLRRGLLDLMERFDCIGDV  354 (433)
T ss_dssp             -TSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             -CCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence             99999999999999988763  2  4467799999988888863111 23456666667777776655    3544444


Q ss_pred             CCCceEEEEEeCCC--------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          360 PSYSNFILCEVTSG--------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       360 p~~~~~~~~~~~~~--------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      ++.|+|+|+++++.        .+..++.+.|.++||.+.++..++.++++||+++   +.++++++.++|+
T Consensus       355 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~  426 (433)
T 1zod_A          355 RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLG  426 (433)
T ss_dssp             EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHH
Confidence            56788999988631        2367899999999999998775444589999865   3444444444443

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.98  E-value=1.7e-31  Score=257.93  Aligned_cols=313  Identities=12%  Similarity=0.081  Sum_probs=223.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCC--CCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPY--IYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~--~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~  172 (423)
                      ++++|+.+.+. ++++++.+++.+....+  .++ ..-..++++.+++++|.++++|++|+|+++++..+++.++++||+
T Consensus        14 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~   92 (359)
T 1svv_A           14 KPYSFVNDYSV-GMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEA   92 (359)
T ss_dssp             -CEECSCSCSS-CCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEE
T ss_pred             eeEEecCCCcC-CCCHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCE
Confidence            46999997776 77899999998732211  111 223567888888889988899999999999999999999999999


Q ss_pred             EEEcCCCchhhHH--HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC------CceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          173 IVDCPPTFTMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVERE------KPKCIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       173 Vl~~~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                      |+++.|+|..+..  .++..|++++.+|.+ ++.+|++++++.+++.      ++++|++++| ||||.+++.+++++|+
T Consensus        93 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~  170 (359)
T 1svv_A           93 VIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDIS  170 (359)
T ss_dssp             EEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHH
T ss_pred             EEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHH
Confidence            9999999998776  477899999999975 6789999999999754      3899999999 7999999966655554


Q ss_pred             ---cC-CCEEEEccCCccccCC--Cchhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc--CC--CC
Q 014492          245 ---EM-PILVVLDEAYTEFSGL--ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--QP--YN  313 (423)
Q Consensus       245 ---~~-~~~li~Deay~~~~~~--~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--~~--~~  313 (423)
                         +. |+++|+||+|..|..+  +.....+. .....+++.|++|..+  ..++|+++.++++++.+....  ..  +.
T Consensus       171 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  248 (359)
T 1svv_A          171 ASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNARHLIKQRGALMA  248 (359)
T ss_dssp             HHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHHHHHHHTTCCCT
T ss_pred             HHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHHHHHhcCCcccc
Confidence               44 9999999999554211  11001000 0112267778899533  345788888888877665432  22  22


Q ss_pred             CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhC-CcEEE
Q 014492          314 VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKM-GVMIR  391 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~  391 (423)
                      .+.....++..++++ +.+++.+++++++++++.+.| +.+++.+ .|.+++|+|++++     .++.+.|.++ ||.+.
T Consensus       249 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~gi~v~  321 (359)
T 1svv_A          249 KGWLLGIQFEVLMKD-NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE-----NTMIAELNNDFDMYTV  321 (359)
T ss_dssp             TTHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE-----HHHHHHHTTTEECEEE
T ss_pred             cchhhHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC-----HHHHHHHHHhcCEEEE
Confidence            233333334456665 446788889999999999999 4444454 4778899998885     5788999877 99994


Q ss_pred             eCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          392 HYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       392 ~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +.. +..++++||+++   +.++++++.++|++
T Consensus       322 ~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~  353 (359)
T 1svv_A          322 EPL-KDGTCIMRLCTSWATEEKECHRFVEVLKR  353 (359)
T ss_dssp             EEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             ecc-cCCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence            321 234679999875   34455555555543

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.97  E-value=2.9e-30  Score=252.63  Aligned_cols=306  Identities=18%  Similarity=0.168  Sum_probs=230.0

Q ss_pred             CCCCCCC-C---HHHHHHHhcC-CCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEE
Q 014492          103 NENPYGP-P---PEVREALGQL-KFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIV  174 (423)
Q Consensus       103 ~~~~~~~-~---~~v~~al~~~-~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl  174 (423)
                      .+++|++ |   +++.+++.+. ..+ ..| +.++..++|+++++++|.+ ++|++++| ++++.+++.++ +++||+|+
T Consensus         5 ~~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi   82 (388)
T 1b9h_A            5 KAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAA-HALAVTNG-THALELALQVMGVGPGTEVI   82 (388)
T ss_dssp             CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTTCS-EEEEESCH-HHHHHHHHHHTTCCTTCEEE
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhCCC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEE
Confidence            3556665 5   7888888762 221 234 6667899999999999975 67878877 89999999998 89999999


Q ss_pred             EcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEE
Q 014492          175 DCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (423)
Q Consensus       175 ~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~  252 (423)
                      ++.|+|..+...++..|++++.++.+. ++.+|++++++.++ .++++|+   |+||||.+.+.+++.++|+. |++||+
T Consensus        83 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~  158 (388)
T 1b9h_A           83 VPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQ  158 (388)
T ss_dssp             EESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCE
T ss_pred             ECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEE
Confidence            999999999999999999999999764 47899999999996 6788777   99999999999999999998 999999


Q ss_pred             ccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-H--HHHHHHhcC-----------------C
Q 014492          253 DEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I--IEYLWRAKQ-----------------P  311 (423)
Q Consensus       253 Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~--~~~l~~~~~-----------------~  311 (423)
                      |++|..+. +.+....   ..+ ++.+.||||..+++|.|+||++++++ +  ++.+.....                 .
T Consensus       159 D~a~~~g~~~~~~~~~---~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  234 (388)
T 1b9h_A          159 DAAHAHGARWQGKRVG---ELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSN  234 (388)
T ss_dssp             ECTTCTTCEETTEEGG---GSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCB
T ss_pred             ecchhcCCccCCeecc---ccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeeccccc
Confidence            99998643 2222222   222 57889999776777789999998875 6  566644321                 0


Q ss_pred             CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-------CCceEEEEEeCCC--CCHHHHHHH
Q 014492          312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP-------SYSNFILCEVTSG--MDAKKLKDD  382 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-------~~~~~~~~~~~~~--~~~~~l~~~  382 (423)
                      +.++.+...++...+   +++++..++++++++++.+.|++++++.+.+       ..++++|+++++.  .+.+++.+.
T Consensus       235 ~~~~~~~~a~~~~~~---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  311 (388)
T 1b9h_A          235 MRLNEFSASVLRAQL---ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDR  311 (388)
T ss_dssp             CBCBHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHH
Confidence            124555444433333   4567788888899999999999886666542       3478999999742  257889999


Q ss_pred             HHhCCcEEEeCCCCC----------------------C-------CCeEEEEec----ChhhHHHHHHHHhh
Q 014492          383 LAKMGVMIRHYNNKE----------------------L-------KGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       383 L~~~gI~v~~~~~~~----------------------~-------~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      |.++||.++.+..+.                      .       .+.|||++.    +.++++++.++|++
T Consensus       312 L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~  383 (388)
T 1b9h_A          312 LVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIAD  383 (388)
T ss_dssp             HHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHH
T ss_pred             HHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHH
Confidence            999999998764321                      0       135999975    45566777777665

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.97  E-value=7.2e-31  Score=258.08  Aligned_cols=310  Identities=15%  Similarity=0.168  Sum_probs=236.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCe
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDK  172 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~  172 (423)
                      .+++||+.+.++++  +++.+++.+......| +..+..++|+++++++|.+  ++++++|+++++..+++++ +++||+
T Consensus        30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~~y~~~~~~~~l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~~gd~  105 (399)
T 2oga_A           30 VPFLDLKAAYEELR--AETDAAIARVLDSGRYLLGPELEGFEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIGPGDE  105 (399)
T ss_dssp             BCSCCHHHHHHHTH--HHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCCTTCE
T ss_pred             CcccccCcCCCCCC--HHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCCCcCE
Confidence            45788888887765  8888888763211245 4567889999999999975  5677777799999999998 899999


Q ss_pred             EEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEE
Q 014492          173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILV  250 (423)
Q Consensus       173 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~l  250 (423)
                      |+++.|+|..+...++..|++++.+|.++ ++.+|++++++.++ .++++|+   |+||||.+.+.+++.++|+. |+++
T Consensus       106 vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~l  181 (399)
T 2oga_A          106 VIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAIT-PRTRALL---PVHLYGHPADMDALRELADRHGLHI  181 (399)
T ss_dssp             EEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEE
T ss_pred             EEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcC-CCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEE
Confidence            99999999999999999999999999765 57899999999997 5788877   67899999999999999998 9999


Q ss_pred             EEccCCcccc-CCCchhhhhccCCcEEEEccC--hhhhcccCccccccccC-HHHHHHHHHhcCC--------------C
Q 014492          251 VLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------Y  312 (423)
Q Consensus       251 i~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------~  312 (423)
                      |+||+|..+. +......   .. ..+++.|+  ||.+|.+| |.||++.+ +++++++......              +
T Consensus       182 i~Dea~~~g~~~~~~~~~---~~-~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~  256 (399)
T 2oga_A          182 VEDAAQAHGARYRGRRIG---AG-SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNS  256 (399)
T ss_dssp             CEECTTCTTCEETTEETT---CT-TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBC
T ss_pred             EEECcccccCccCCeecc---cc-cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCC
Confidence            9999998663 2222111   11 24888888  79999779 99999986 8888877654321              3


Q ss_pred             CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEE--EEeCCCCCHHHHHHHHHhCCc
Q 014492          313 NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFIL--CEVTSGMDAKKLKDDLAKMGV  388 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~--~~~~~~~~~~~l~~~L~~~gI  388 (423)
                      .++.+.+.++.++++.   +++..++.+++++++.+.|++++++.+  .|+.++++|  +.+. ..+..++.+.|.++||
T Consensus       257 ~~~~~~~a~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI  332 (399)
T 2oga_A          257 RLDEMQAAVLRIRLAH---LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVR-TERRDELRSHLDARGI  332 (399)
T ss_dssp             CCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEE-CSSHHHHHHHHHHTTB
T ss_pred             CcCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEE-CCCHHHHHHHHHHCCC
Confidence            4577777777777754   345566667788889999988765543  345566665  3332 2478899999999999


Q ss_pred             EEEeCCCCC----------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492          389 MIRHYNNKE----------------L-------KGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       389 ~v~~~~~~~----------------~-------~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .++++....                .       .+++||++.   +.++++++.++|++
T Consensus       333 ~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  391 (399)
T 2oga_A          333 DTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVRE  391 (399)
T ss_dssp             CCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred             ceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence            998743210                0       268999987   67777777777765

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.97  E-value=1.7e-31  Score=258.91  Aligned_cols=305  Identities=15%  Similarity=0.079  Sum_probs=223.1

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcCC------------CCCCCCCc--chHHHHHHHHHHhCCCCC-c-EEEeCCHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQLK------------FPYIYPDP--ESRRLRAALAKDSGLESD-H-ILVGCGADELIDL  161 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~------------~~~~Y~~~--g~~~lr~~ia~~~g~~~~-~-i~~t~G~~~al~~  161 (423)
                      +.+..+  +.++++.+++++.+..            ..++|+..  -.+++++.+++++|++++ + +++|+|+++++..
T Consensus         6 ~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~   83 (362)
T 2c0r_A            6 YNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAM   83 (362)
T ss_dssp             EECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHH
T ss_pred             eeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHH
Confidence            444443  5778899999987632            12233332  245789999999999764 6 5788999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchh--hHHHHHHCCCeEEEecCC--CCCC--CCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRK--SDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~--~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.+++++||+|++..+.+..  +...++..| +++.++.+  .+++  +|.++++  ++ +++|+|++++|+||||.++
T Consensus        84 ~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~~~~~~n~tG~~~  159 (362)
T 2c0r_A           84 IPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLHLTSNETIEGAQF  159 (362)
T ss_dssp             HHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEEEESEETTTTEEC
T ss_pred             HHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEEEeCCcCccceec
Confidence            999999999999887766443  245667789 99999865  2233  4666553  54 6899999999999999974


Q ss_pred             CHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh-------
Q 014492          236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-------  308 (423)
Q Consensus       236 ~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~-------  308 (423)
                      +  ++++|  .|+++|+|++|..+.....    +...  .+++.|+||.+|++|  +||+++++++++.+.+.       
T Consensus       160 ~--~l~~i--~~~~vivD~a~~~~~~~~~----~~~~--d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~~  227 (362)
T 2c0r_A          160 K--AFPDT--GSVPLIGDMSSDILSRPFD----LNQF--GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLRY  227 (362)
T ss_dssp             S--SCCCC--TTSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGCH
T ss_pred             c--ccccc--CCCEEEEEChhhccCCccc----hhHC--cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHhH
Confidence            4  23333  6999999999986643211    2223  377889999999888  89999988876555321       


Q ss_pred             -------cCCCCCcHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHHHHccCCCC-eec----CCCceEEEEEeCCC
Q 014492          309 -------KQPYNVSVAAEVAACAALQN-PI--YLEKVKEALIKERERLFKLLKDVPFL-NPY----PSYSNFILCEVTSG  373 (423)
Q Consensus       309 -------~~~~~~~~~~~~a~~~~l~~-~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~----p~~~~~~~~~~~~~  373 (423)
                             ...++++...+.++..+|+. .+  ++++.+++++++++++.+.|++++.+ .+.    ...+.++++.++++
T Consensus       228 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (362)
T 2c0r_A          228 DTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE  307 (362)
T ss_dssp             HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH
T ss_pred             HHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc
Confidence                   23467888888888888875 22  57889999999999999999988733 432    12345678888755


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+..++.+.|.++||.+.++...  .+++|||++   +.++++++.++|+++
T Consensus       308 ~~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~  357 (362)
T 2c0r_A          308 ELEKEFVKASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHF  357 (362)
T ss_dssp             HHHHHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            56788999999999988776533  468999997   577777777777653

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.97  E-value=1.2e-30  Score=258.40  Aligned_cols=313  Identities=15%  Similarity=0.196  Sum_probs=227.5

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhcC-CC----CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~-~~----~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..++.++||..+.  ++++ .+|++.+++.+. ..    ...|+.+...++++.+++++|  .++|++++|+++++..++
T Consensus        54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al  131 (420)
T 2pb2_A           54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANETAF  131 (420)
T ss_dssp             TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHH
Confidence            4567789998763  5555 478888888762 21    123555556789999999998  579999999999999999


Q ss_pred             HHhcC-------CC-CeEEEcCCCchhhHH-HHHHCCCe------------EEEecCCCCCCCCHHHHHHHhhcCCceEE
Q 014492          164 RCVLD-------PG-DKIVDCPPTFTMYEF-DAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKPKCI  222 (423)
Q Consensus       164 ~~l~~-------~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~v~~~~~~~~d~~~l~~~i~~~~~~~i  222 (423)
                      +.+..       +| +.|++.+|+|+.+.. .....|.+            +..+|.     .|++++++.+. +++++|
T Consensus       132 ~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~le~~i~-~~~~~v  205 (420)
T 2pb2_A          132 KLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-----NDLHAVKAVMD-DHTCAV  205 (420)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-----TCHHHHHHHCC-TTEEEE
T ss_pred             HHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-----CCHHHHHHHhc-cCceEE
Confidence            98765       67 589999999976543 34445543            555553     38999999997 689999


Q ss_pred             EEcCCCCCcCc-CCCHHHHHHHHcC----CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccccc
Q 014492          223 FLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (423)
Q Consensus       223 ~l~~p~NPtG~-~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i  295 (423)
                      ++++++|++|. +++.+.+++|++.    |+++|+||+|.+|...+..  ....+..++++   ||||.++ +|+|+||+
T Consensus       206 i~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii---t~sK~l~-~G~~iG~~  281 (420)
T 2pb2_A          206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL---TSAKALG-GGFPVSAM  281 (420)
T ss_dssp             EECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE---EECGGGG-TTSCCEEE
T ss_pred             EEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE---Eeccccc-CCCceEEE
Confidence            99988998884 5787777666553    9999999999877654332  22233334444   6899999 89999999


Q ss_pred             ccCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEEEEE
Q 014492          296 AFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCE  369 (423)
Q Consensus       296 ~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~~~~  369 (423)
                      ++++++++.+..  ....++.+++++.++.++|+..+. ++..++++++++++.+.|+++    +.+...++.|+|++++
T Consensus       282 ~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~  360 (420)
T 2pb2_A          282 LTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAE  360 (420)
T ss_dssp             EECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEE
T ss_pred             EEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEE
Confidence            999988776654  233467899999988888764221 456677788888888888664    4333334568899999


Q ss_pred             eCCCC--CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          370 VTSGM--DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       370 ~~~~~--~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +++..  +..++.+.|.++||.+.+++    ++++||+++   +.++++++.+.|++
T Consensus       361 ~~~~~~~~~~~l~~~l~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~  413 (420)
T 2pb2_A          361 LKPKYKGRARDFLYAGAEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ  413 (420)
T ss_dssp             ECGGGTTCHHHHHHHHHHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             ECCCchHHHHHHHHHHHHCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            87432  68889999999999999875    579999954   45555555555543

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.97  E-value=1.3e-30  Score=258.30  Aligned_cols=280  Identities=14%  Similarity=0.106  Sum_probs=218.4

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcCCCCCCCCC--cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEc
Q 014492           99 KIDANENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC  176 (423)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~--~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~  176 (423)
                      +|+.+++++++++++.+++.+......|++  .+..++|++++++++.  ++|++|+|+++++..++.++. +||+|+++
T Consensus        20 ~l~~~~p~~~~p~~~~~a~~~~~~~~~y~~~~~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~   96 (424)
T 2po3_A           20 PLLVGRPNRIDRARLYERLDRALDSQWLSNGGPLVREFEERVAGLAGV--RHAVATCNATAGLQLLAHAAG-LTGEVIMP   96 (424)
T ss_dssp             CEETTCCCCCCHHHHHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHHTS--SEEEEESCHHHHHHHHHHHHT-CCSEEEEE
T ss_pred             cccccCCCCCChHHHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcC-CCCEEEEC
Confidence            678889999988899888876321135765  5789999999999996  589999999999999999875 78999999


Q ss_pred             CCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEcc
Q 014492          177 PPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE  254 (423)
Q Consensus       177 ~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~De  254 (423)
                      .|+|..+...++..|++++.++.+. ++.+|++++++.+. .++++|++++   |||...+.+++.++|+. |++||+||
T Consensus        97 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~De  172 (424)
T 2po3_A           97 SMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVT-PRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDA  172 (424)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCC-TTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred             CCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhC-cCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEEC
Confidence            9999999999999999999999764 67899999999997 5899999864   89999999999999987 99999999


Q ss_pred             CCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC-----C---------CCcHHH
Q 014492          255 AYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-----Y---------NVSVAA  318 (423)
Q Consensus       255 ay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~-----~---------~~~~~~  318 (423)
                      +|.. +.+.+....   ...+ +++.||||..+++|.|+||++++ +++++++......     +         .++.+.
T Consensus       173 a~~~g~~~~~~~~~---~~~d-i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~  248 (424)
T 2po3_A          173 AHALGCAVDGRPAG---SLGD-AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAA  248 (424)
T ss_dssp             TTCTTCEETTEETT---SSSS-EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHH
T ss_pred             ccccCCeECCeecc---cccC-EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHH
Confidence            9994 544332221   2223 89999996667778999999998 8888888765432     1         123333


Q ss_pred             HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCc----eEEEEEeCC---CCCHHHHHHHHHhCCcE
Q 014492          319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYS----NFILCEVTS---GMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~----~~~~~~~~~---~~~~~~l~~~L~~~gI~  389 (423)
                      ..++   +...+++++..++.+++++++.+.|++++++.+.+  .++    .++++.+++   +.+..++.+.|.++||.
T Consensus       249 aa~~---l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~  325 (424)
T 2po3_A          249 AAMG---LTSLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVH  325 (424)
T ss_dssp             HHHH---HHHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEE
T ss_pred             HHHH---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCc
Confidence            3322   22335567788888889999999999886565543  222    234477764   56789999999999999


Q ss_pred             EEe
Q 014492          390 IRH  392 (423)
Q Consensus       390 v~~  392 (423)
                      +++
T Consensus       326 v~~  328 (424)
T 2po3_A          326 TRA  328 (424)
T ss_dssp             CBC
T ss_pred             eec
Confidence            987

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.97  E-value=7.3e-31  Score=261.24  Aligned_cols=321  Identities=13%  Similarity=0.119  Sum_probs=221.2

Q ss_pred             CCCCCeeEcCCCCC--CCC-CCHHHHHHHhc-CCCCC-----CCCCcchHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHH
Q 014492           92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDL  161 (423)
Q Consensus        92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~-----~Y~~~g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~  161 (423)
                      ..+++++|+..+.+  +++ .+|++.+++.+ +....     .|++....++++.++++++... +++++|+|+++++..
T Consensus        40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~  119 (439)
T 3dxv_A           40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEA  119 (439)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHH
Confidence            45677899998865  455 78999988875 22211     2233446789999999987656 799999999999999


Q ss_pred             HHHHh--cCCCCeEEEcCCCchhhHHHHHHCCCe-E--------------EEecCCCCCCC-----CHHHHHHHhh---c
Q 014492          162 IMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAA-V--------------VKVPRKSDFSL-----NVELIADAVE---R  216 (423)
Q Consensus       162 ~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~--------------~~v~~~~~~~~-----d~~~l~~~i~---~  216 (423)
                      +++.+  ..+++.|++.+|+|+.+...+...+.. .              ..+|.++.+..     |+++|++.+.   .
T Consensus       120 al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  199 (439)
T 3dxv_A          120 AYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPA  199 (439)
T ss_dssp             HHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCC
Confidence            99975  335678888899987555444433222 1              23333222222     6999999984   3


Q ss_pred             CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccC
Q 014492          217 EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAG  289 (423)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G  289 (423)
                      .++++|++++++|++|.+.+    .+++.++|+. |++||+||+|.+|...+.  .....+...+++   ||||.++ +|
T Consensus       200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~---s~sK~~~-~G  275 (439)
T 3dxv_A          200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL---VLGKGLG-GG  275 (439)
T ss_dssp             TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE---EECGGGG-TT
T ss_pred             CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE---EEcchhc-CC
Confidence            57888998888999999988    7778888876 999999999997754332  122222233333   8999999 69


Q ss_pred             ccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc----cCCCCeecCCCc
Q 014492          290 LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK----DVPFLNPYPSYS  363 (423)
Q Consensus       290 ~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~p~~~  363 (423)
                      +|+||+++++++++.+...  ...+ .+++++.++.++|+..+. ++..++++++++++.+.|+    +++.+...++.|
T Consensus       276 ~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  353 (439)
T 3dxv_A          276 LPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRG  353 (439)
T ss_dssp             SCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET
T ss_pred             cceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE
Confidence            9999999999998877654  3447 899999998888864211 2334444445555544444    456555556778


Q ss_pred             eEEEEEe--------CCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          364 NFILCEV--------TSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       364 ~~~~~~~--------~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      +|+++++        +++.+..++.+.|.++||.+++++.  ..+++||+++   +.++++++.++|+
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~  419 (439)
T 3dxv_A          354 LACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLD  419 (439)
T ss_dssp             TEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence            8998887        3334467889999989999998753  2589999865   3444444444443

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.97  E-value=1.3e-29  Score=248.34  Aligned_cols=308  Identities=16%  Similarity=0.176  Sum_probs=233.8

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI  173 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~V  173 (423)
                      ++|+|+.  +.+  ++++.+++.+. .....++.++..++|+++++++|.  +++++++|+++++..++.++ +++||+|
T Consensus         9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~al~~~~~~~~~~~gd~V   82 (393)
T 1mdo_A            9 DFLPFSR--PAM--GAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEV   82 (393)
T ss_dssp             CCBCSCC--CCC--CHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             cccccCC--CCC--CHHHHHHHHHHHhcCCcCCChHHHHHHHHHHHHhCC--CcEEEecChHHHHHHHHHHcCCCCCCEE
Confidence            4677775  443  47777887663 222223556788999999999996  48999999999999999999 8999999


Q ss_pred             EEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (423)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li  251 (423)
                      +++.|+|..+...++..|++++.++.++ ++.+|++++++.++ .++++|+++   ||||.+.+.+++.++|+. |+++|
T Consensus        83 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li  158 (393)
T 1mdo_A           83 ITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVI  158 (393)
T ss_dssp             EEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBC
T ss_pred             EeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcC-CCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEE
Confidence            9999999999999999999999999764 46799999999997 588998876   489999999999999988 99999


Q ss_pred             EccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCC------------------
Q 014492          252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP------------------  311 (423)
Q Consensus       252 ~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~------------------  311 (423)
                      +||+|..+. +.....   ..  .++++.|+||..+++|.|+||++.+ +++++.+......                  
T Consensus       159 ~D~a~~~g~~~~~~~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  233 (393)
T 1mdo_A          159 EDAAHATGTSYKGRHI---GA--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQA  233 (393)
T ss_dssp             EECTTCTTCEETTEET---TS--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CC
T ss_pred             EECccccCCeECCeec---CC--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccc
Confidence            999999643 222211   11  5689999994444456699999986 7888887754321                  


Q ss_pred             --------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec--C-----CCceEEEEEeCC---C
Q 014492          312 --------YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY--P-----SYSNFILCEVTS---G  373 (423)
Q Consensus       312 --------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p-----~~~~~~~~~~~~---~  373 (423)
                              +.++.+...++...++   .+++..++.+++++++.+.|++++ +.+.  +     ..++++|+.+++   +
T Consensus       234 ~~~~~g~~~~~~~~~~a~~~~~l~---~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~  309 (393)
T 1mdo_A          234 EVLAPGYKYNLPDLNAAIALAQLQ---KLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCG  309 (393)
T ss_dssp             EESSCCCBCCCCHHHHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHS
T ss_pred             cccccCccCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccccc
Confidence                    1235555444444443   355666777788899999998887 4432  2     345688999974   5


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCC--------------C-------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNNK--------------E-------LKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~~--------------~-------~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+..++.+.|.++||.++++..+              .       ..+++||++.   +.++++++.++|+++
T Consensus       310 ~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  382 (393)
T 1mdo_A          310 ITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI  382 (393)
T ss_dssp             SCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence            68899999999999999876532              1       1348999997   677778888777653

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.97  E-value=2.3e-31  Score=257.47  Aligned_cols=307  Identities=10%  Similarity=0.029  Sum_probs=223.4

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC-CC-----------CCCCCCc--chHHHHHHHHHHhCCC-CCcEEEeCCH-HHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQL-KF-----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGCGA-DELID  160 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~~-----------~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~t~G~-~~al~  160 (423)
                      ++.++.+.  .++++.+++++.+. ..           .++|+..  ...++++.+++++|++ +++|++|+|+ ++++.
T Consensus         4 ~~~~~~g~--~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~   81 (360)
T 1w23_A            4 VFNFNAGP--SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT   81 (360)
T ss_dssp             CEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eEeecCCC--cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHH
Confidence            46666654  47789999998763 21           0112211  2568999999999986 5699999999 99999


Q ss_pred             HHHHHhcCC---CCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHH-HhhcCCceEEEEcCCCCCcCcCC
Q 014492          161 LIMRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       161 ~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~-~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      .++..++.+   ||.|+++.++|..+ ..++..| +++.+|.+. ++.+|++++++ .++ +++|+|++++|+||||.++
T Consensus        82 ~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~-~~~k~v~~~~~~nptG~~~  158 (360)
T 1w23_A           82 MLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANSYQSIPDFSEFQLN-ENDAYLHITSNNTIYGTQY  158 (360)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-TTEEEEEEESEETTTTEEC
T ss_pred             HHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccCcCCccchHhhccC-CCCCEEEEeCCCCCcceec
Confidence            999988865   55677666666543 3456789 999999753 34579999998 885 6899999999999999998


Q ss_pred             CHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc------
Q 014492          236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------  309 (423)
Q Consensus       236 ~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~------  309 (423)
                      +  ++.+  +.|++||+||+|..+.....    +...  .++++|+||.+|++|  +||+++++++++++....      
T Consensus       159 ~--~i~~--~~~~~li~D~a~~~~~~~~~----~~~~--di~~~s~sK~~~~~G--~G~~~~~~~~~~~~~~~~~~~~~~  226 (360)
T 1w23_A          159 Q--NFPE--INHAPLIADMSSDILSRPLK----VNQF--GMIYAGAQKNLGPSG--VTVVIVKKDLLNTKVEQVPTMLQY  226 (360)
T ss_dssp             S--SCCC--CCSSCEEEECTTTTTSSCCC----GGGC--SEEEEETTTTTSCTT--CEEEEEEHHHHCSCCTTCCGGGCH
T ss_pred             c--cccc--cCCceEEEechhhcCCCCcC----cccC--CEEEEEcccccCCCC--cEEEEEcHHHHhhcccCCcchhhh
Confidence            7  3433  34999999999987653211    1222  278999999998666  899999988876554321      


Q ss_pred             -------C-CCCCcHHHHHHHHHHhCCh--H-HHHHHHHHHHHHHHHHHHHHccCCCC-eec--CC--CceEEEEEeCCC
Q 014492          310 -------Q-PYNVSVAAEVAACAALQNP--I-YLEKVKEALIKERERLFKLLKDVPFL-NPY--PS--YSNFILCEVTSG  373 (423)
Q Consensus       310 -------~-~~~~~~~~~~a~~~~l~~~--~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~--p~--~~~~~~~~~~~~  373 (423)
                             . ..+.+..++.++..+++..  . ++++.+++++++++++.+.|++++.+ ...  |+  .+.++|+++++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (360)
T 1w23_A          227 ATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE  306 (360)
T ss_dssp             HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH
T ss_pred             hhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC
Confidence                   1 1245666667676666541  2 67888999999999999999988743 432  32  245899999754


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+..++.+.|.++||.+.++..  .++++||+++   +.++++++.++|+++
T Consensus       307 ~~~~~~~~~l~~~gi~~~~~~~--~~~~iRis~~~~~~~~~i~~~~~~l~~~  356 (360)
T 1w23_A          307 ELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIYNAVPIDACIALRELMIQF  356 (360)
T ss_dssp             HHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHCCeeeecCCC--CCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4567888888899999987653  2689999997   566667777766653

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.97  E-value=5e-30  Score=251.96  Aligned_cols=308  Identities=14%  Similarity=0.112  Sum_probs=225.0

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CC--CCCCCCc--chHHHHHHHHHHhCCC-CCcEEE-eCCHHHHHHHHHHHh
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCV  166 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~--~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~-t~G~~~al~~~~~~l  166 (423)
                      +++.+..  .+.++++++++++.+.   ..  .+.|++.  ..+++|+.+++++|++ +++|++ |+|+++++.++++++
T Consensus        40 ~~~~~~~--~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l  117 (398)
T 2fyf_A           40 RDGRFGS--GPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGL  117 (398)
T ss_dssp             SSCBCCS--SSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHT
T ss_pred             CCccccC--CCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHh
Confidence            3455554  4567789999999772   11  1344443  2578999999999997 468998 999999999999999


Q ss_pred             cCCCCeEEEcCCCchh-hHHHHHHC--CCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          167 LDPGDKIVDCPPTFTM-YEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       167 ~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +++| .+++..+.|.. ....+...  |++++.++.++++..+.     .+. .++++|++++|+||||.+++.+++.++
T Consensus       118 ~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~  190 (398)
T 2fyf_A          118 IDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPGSAPEP-----QTD-PSVDVIAWAHNETSTGVAVAVRRPEGS  190 (398)
T ss_dssp             CSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTTCCCCC-----CCC-TTCSEEEEESEETTTTEECCCCCCTTC
T ss_pred             cCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCCCCCCc-----ccc-CCCCEEEEeCcCCCcceecchHHhhhh
Confidence            9887 22333444421 12244555  88888888765444432     243 689999999999999999999988776


Q ss_pred             HcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------------
Q 014492          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------------  308 (423)
Q Consensus       244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------------  308 (423)
                        .|+++|+|++|..+.....    +..  ..+++.|+||.+|++| ++||+++++++++++.+.               
T Consensus       191 --~~~~vivD~a~~~~~~~~~----~~~--~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~  261 (398)
T 2fyf_A          191 --DDALVVIDATSGAGGLPVD----IAE--TDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPI  261 (398)
T ss_dssp             --C-CEEEEECTTTTTTSCCC----GGG--CSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHH
T ss_pred             --cCCeEEEEeccccCCcccC----ccc--CcEEEEecCcccCCCC-ceEEEEECHHHHHHhhcccccCCCCCcEEehHH
Confidence              6999999999987653211    111  3478999999999775 599999999998877432               


Q ss_pred             --------cCCCCCcHHHHHHHHHHhCC-hHH--HHHHHHHHHHHHHHHHHHHccCCCCeec---C-CCce-EEEEEeCC
Q 014492          309 --------KQPYNVSVAAEVAACAALQN-PIY--LEKVKEALIKERERLFKLLKDVPFLNPY---P-SYSN-FILCEVTS  372 (423)
Q Consensus       309 --------~~~~~~~~~~~~a~~~~l~~-~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p-~~~~-~~~~~~~~  372 (423)
                              ...++.+..++.++..+++. .+.  +++.+++++++++++.+.|++++++.+.   | ..++ ++|+++++
T Consensus       262 ~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~  341 (398)
T 2fyf_A          262 AVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD  341 (398)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT
T ss_pred             HhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC
Confidence                    12245677777777777764 222  7888999999999999999988656554   3 1344 89999987


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      +.+..++.+.|.++||.++++.....++++||+++   +.++++++.++|++
T Consensus       342 ~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~  393 (398)
T 2fyf_A          342 DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDW  393 (398)
T ss_dssp             TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHH
Confidence            78899999999988999987633223579999998   66777777777664

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.97  E-value=8.6e-31  Score=253.48  Aligned_cols=315  Identities=15%  Similarity=0.022  Sum_probs=225.4

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe--
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK--  172 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~--  172 (423)
                      ..+-+..++|+++++|++.+++.+......| ++++..++++++++++|.+. . ++++|+++++..+++.++.+||.  
T Consensus        14 ~~~~~~~~~~~~g~~p~v~~ai~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~-i~~~~g~~a~~~a~~~~~~~g~~~v   91 (359)
T 3pj0_A           14 PYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQS-A-VFFPSGTMAQQIALRIWADRKENRR   91 (359)
T ss_dssp             SEESSSSSCCBHHHHHHHTTTSCTTCBCCBTTBSHHHHHHHHHHHHHHTCSE-E-EEESCHHHHHHHHHHHHHHHHTCCE
T ss_pred             chhhcCCCccccCCCHHHHHHHHhhcccCcccCCHHHHHHHHHHHHHhCCCc-E-EEeCCHHHHHHHHHHHHHhcCCCcE
Confidence            4467778899999999999998873222345 66778999999999999753 3 44577788999999999888886  


Q ss_pred             EEEcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc-CcCCCHHHHHHHHc---
Q 014492          173 IVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILE---  245 (423)
Q Consensus       173 Vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~---  245 (423)
                      |+++.+.|....   ..+...|++++.+|. +++.+|++++++. . +++++|++++|+||+ |.+++.+++++|++   
T Consensus        92 vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~-~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~  168 (359)
T 3pj0_A           92 VAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-R-EPVSSVLIELPQREIGGQLPAFEELEKISEYCH  168 (359)
T ss_dssp             EEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-S-SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred             EEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-c-CCceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence            555555554221   223457999999997 4568999999998 4 789999999999998 79999999966655   


Q ss_pred             C-CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----CCCcHH
Q 014492          246 M-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVA  317 (423)
Q Consensus       246 ~-~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----~~~~~~  317 (423)
                      . |++||+|++|..+..   +....... ... .+++.|+||.++.++ . ||++.++++++.+.+....    ......
T Consensus       169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~-d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~  244 (359)
T 3pj0_A          169 EQGISLHLDGARLWEITPFYQKSAEEIC-ALF-DSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKRRYGGDLISLYP  244 (359)
T ss_dssp             HHTCEEEEEETTCGGGHHHHTCCHHHHH-TTC-SEEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHH
T ss_pred             HcCCEEEEECcchhcchhhhCCCHHHhh-ccC-CEEEEeccccCCCcc-e-EEEECCHHHHHHHHHHHHHhCCCcchhHH
Confidence            3 999999999875531   11122221 222 245568999887553 2 7888899999988764321    122233


Q ss_pred             HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeC
Q 014492          318 AEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHY  393 (423)
Q Consensus       318 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~  393 (423)
                      .+.++..++++  .. +..++++++++++.+.|++++++.+  .|+.++|+|++++..  .+..++.+.|.++||.++++
T Consensus       245 ~~~a~~~~l~~--~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g  321 (359)
T 3pj0_A          245 YILSADYYFEK--RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGY  321 (359)
T ss_dssp             HHHHHHHHHHH--HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSC
T ss_pred             HHHHHHHHHHH--HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCC
Confidence            33333344432  22 3344567888999999999876665  468899999998632  24678888999999999998


Q ss_pred             CCC--CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492          394 NNK--ELKGYVRVSVGK---PEHTDALMECLMHL  422 (423)
Q Consensus       394 ~~~--~~~~~iRis~~~---~~~~~~l~~al~~l  422 (423)
                      ..+  ...+++|++++.   ..+.+++.+++++|
T Consensus       322 ~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l  355 (359)
T 3pj0_A          322 LQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCL  355 (359)
T ss_dssp             CEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHH
T ss_pred             ccccCCCceEEEEEecCccccCCHHHHHHHHHHH
Confidence            653  345689999863   23468888888876

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.97  E-value=2.9e-30  Score=258.52  Aligned_cols=322  Identities=13%  Similarity=0.079  Sum_probs=229.6

Q ss_pred             CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-C---CCC---CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-L---KFP---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~---~~~---~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..++++||+..|  .++++. +|++.+++.+ +   ...   ..|+++...+|++.++++++.+.++|++|+|+++++..
T Consensus        48 ~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~  127 (460)
T 3gju_A           48 NNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET  127 (460)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence            456789999887  566664 5888888765 2   111   23455556789999999988778899999999999999


Q ss_pred             HHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCC-----CCCCC--------H
Q 014492          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKS-----DFSLN--------V  207 (423)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~-----~~~~d--------~  207 (423)
                      +++.+..        +++.|++..|+|+.+...+...+.             .+..+|.+.     +++.+        +
T Consensus       128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~  207 (460)
T 3gju_A          128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCA  207 (460)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHH
Confidence            9998764        468999999999866655443221             344455221     22344        5


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      ++|++.+.+   .++++|+++.++|++|.+.+    .+++.++|+. |++||+||+|.+|...+..  ....+..+.+  
T Consensus       208 ~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi--  285 (460)
T 3gju_A          208 DKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDL--  285 (460)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSE--
T ss_pred             HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe--
Confidence            888888863   45677887777888888554    5556666665 9999999999988643321  2222233333  


Q ss_pred             EccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERE  344 (423)
Q Consensus       278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~  344 (423)
                       .+|||+++ .| +|+||+++++++++.+...         ...|+.+++++.++.++|+.   +++.++.++..+..++
T Consensus       286 -~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~  363 (460)
T 3gju_A          286 -ITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRA  363 (460)
T ss_dssp             -EEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             -eeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence             36889987 46 8999999999999988632         23578899999999998873   4566777777777788


Q ss_pred             HHHHHHccCCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492          345 RLFKLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE  410 (423)
Q Consensus       345 ~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~  410 (423)
                      .+.+.+++++.+...++.|.|+++.+.+..+           ..++.+.|.++||.+++++   ..+++||++.   +.+
T Consensus       364 ~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e  440 (460)
T 3gju_A          364 ELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLTRE  440 (460)
T ss_dssp             HHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHH
T ss_pred             HHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHH
Confidence            8888888877665566778899988863221           5678899999999999876   3589999954   444


Q ss_pred             hHHHHHHHHh
Q 014492          411 HTDALMECLM  420 (423)
Q Consensus       411 ~~~~l~~al~  420 (423)
                      +++++.++|+
T Consensus       441 ~i~~~l~~l~  450 (460)
T 3gju_A          441 QADIVVSKTA  450 (460)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            5555554444

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.97  E-value=1.5e-30  Score=258.69  Aligned_cols=316  Identities=16%  Similarity=0.113  Sum_probs=220.5

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +..+++++|+..+.  ++++ .+|++.+++.+ +.  ...+|+++...+|+++++++++ .+++|++++|+++++..+++
T Consensus        51 d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~  129 (434)
T 3l44_A           51 DVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIR  129 (434)
T ss_dssp             ETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence            34567899998774  6676 48999988876 22  2245787778899999999997 68899999999999999998


Q ss_pred             HhcC--CCCeEEEcCCCchhhHHHHHHCCC--------------------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492          165 CVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (423)
Q Consensus       165 ~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (423)
                      .+..  +++.|++..|+|+.+...+...+.                    .++.+|.     .|++++++.+.+  .+++
T Consensus       130 ~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~  204 (434)
T 3l44_A          130 VARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF-----NNVETLKEALDKWGHEVA  204 (434)
T ss_dssp             HHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEE
T ss_pred             HHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc-----ccHHHHHHHHHhCCCCEE
Confidence            7654  678999999999865543332222                    1222221     189999998863  3566


Q ss_pred             EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCcccc
Q 014492          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G  293 (423)
                      +|+++.++|++|.+.+    .+++.++|+. |++||+||+|.+| ..+..  ....+....   +.||||.++ +|+|+|
T Consensus       205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG  279 (434)
T 3l44_A          205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPD---LTALGKVIG-GGLPIG  279 (434)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCS---EEEEEGGGG-TTSSCE
T ss_pred             EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCC---eeehhhhhc-CCcCee
Confidence            7776666777888886    7777778877 9999999999988 33221  222222233   447899998 899999


Q ss_pred             ccccCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE
Q 014492          294 YGAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF  365 (423)
Q Consensus       294 ~i~~~~~~~~~l~~-----~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~  365 (423)
                      |+++++++++.+.+     ...+++.+++++.++.++|+.   +++.++.++..+..++.|.+.+...+.....++.++|
T Consensus       280 ~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~  359 (434)
T 3l44_A          280 AYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGA  359 (434)
T ss_dssp             EEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTE
T ss_pred             eEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccE
Confidence            99999999988765     234578899999998888863   3344444444444444444444445554445667888


Q ss_pred             EEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492          366 ILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  421 (423)
Q Consensus       366 ~~~~~~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  421 (423)
                      +++.+.+.             ....++.+.|.++||.+++++    .+++|+++. +.++++++.++|++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~  425 (434)
T 3l44_A          360 LTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGR  425 (434)
T ss_dssp             EEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST----TCCEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC----CCcEEEecccCHHHHHHHHHHHHH
Confidence            88887421             123678888999999999875    357899754 44455555555443

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=4.7e-30  Score=253.29  Aligned_cols=306  Identities=13%  Similarity=0.094  Sum_probs=226.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-------C---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIY-------P---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y-------~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ++.++|+.+.+. ++++.+.+++.+. ....++       +   .....++++++++++|+++++|++|+|+++++..++
T Consensus        27 ~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al  105 (416)
T 1qz9_A           27 EGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL  105 (416)
T ss_dssp             TTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred             CCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHH
Confidence            346899988776 5567777877652 211111       1   123578999999999998899999999999999888


Q ss_pred             HHhc------CCCCe-EEEcCCCchhhHHH----HHHC--CCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          164 RCVL------DPGDK-IVDCPPTFTMYEFD----AAVN--GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       164 ~~l~------~~gd~-Vl~~~p~y~~~~~~----~~~~--g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      ..++      ++||+ |++..++|+.+...    ++..  |++++.+|.       ++++++.+. .++++|++++|+||
T Consensus       106 ~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~-~~~~~v~~~~~~np  177 (416)
T 1qz9_A          106 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAID-QDTAVVMLTHVNYK  177 (416)
T ss_dssp             HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCS-TTEEEEEEESBCTT
T ss_pred             HhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhC-CCceEEEEeccccC
Confidence            8776      89987 55556688754433    3334  999999985       688888886 68999999999999


Q ss_pred             cCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccc-cccccCHHHHHHHHHh
Q 014492          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA  308 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~i~~~~~~~~~l~~~  308 (423)
                      ||.+++.+++.++|+. |+++|+||+|..... +....   ..+..+++.|++|.++ +|.++ ||+++++++++.+...
T Consensus       178 tG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~---~~~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~~~l~~~  252 (416)
T 1qz9_A          178 TGYMHDMQALTALSHECGALAIWDLAHSAGAV-PVDLH---QAGADYAIGCTYKYLN-GGPGSQAFVWVSPQLCDLVPQP  252 (416)
T ss_dssp             TCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-CCCHH---HHTCSEEEECSSSTTC-CCTTCCCEEEECTTTTTTSCCS
T ss_pred             cccccCHHHHHHHHHHcCCEEEEEccccccCc-CCChh---hcCCCEEEecCcccCC-CCCCCeEEEEECHHHHhccCCC
Confidence            9999999999999998 999999999984322 11111   1234488899999874 67888 9999998876655431


Q ss_pred             -------------------------cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccC-C--CCee
Q 014492          309 -------------------------KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDV-P--FLNP  358 (423)
Q Consensus       309 -------------------------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~--~~~~  358 (423)
                                               ...++.+..++.++.++++.  .+++++.+++++++++++.+.|+++ +  ++.+
T Consensus       253 ~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~  332 (416)
T 1qz9_A          253 LSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTL  332 (416)
T ss_dssp             CCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred             ccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEE
Confidence                                     11235677777776666654  2457788999999999999999875 4  4554


Q ss_pred             cCC-----CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          359 YPS-----YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       359 ~p~-----~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      .++     .+++++++++   +..++.+.|.++||.+...    .++++||+++    +.++++++.++|++
T Consensus       333 ~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~~gi~~~~~----~~~~lRis~~~~~~t~~~i~~~~~~l~~  397 (416)
T 1qz9_A          333 VTPREHAKRGSHVSFEHP---EGYAVIQALIDRGVIGDYR----EPRIMRFGFTPLYTTFTEVWDAVQILGE  397 (416)
T ss_dssp             CSCSSGGGBCSEEEEECT---THHHHHHHHHTTTEECEEE----TTTEEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             eCCCCHHHcCCEEEEecC---CHHHHHHHHHhCCcEeccC----CCCeEEEeCcccCCCHHHHHHHHHHHHH
Confidence            333     3678899986   3788999999999998653    2589999986    56666666666654

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.97  E-value=6.7e-30  Score=255.32  Aligned_cols=324  Identities=11%  Similarity=0.065  Sum_probs=222.5

Q ss_pred             CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      ..++++||+..|  .+.++. +|++.+++.+ +...    ..|++....++++.++++++.+.+ |++|+|+++++..++
T Consensus        46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al  124 (452)
T 3n5m_A           46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAF  124 (452)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHH
Confidence            456789999887  456654 6899988876 3221    234444567899999999987666 999999999999999


Q ss_pred             HHhc-----C---CCCeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCCCCC---C---------HHHH
Q 014492          164 RCVL-----D---PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSL---N---------VELI  210 (423)
Q Consensus       164 ~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~~---d---------~~~l  210 (423)
                      +.++     .   +++.|++..|+|+.+...+...+..             +..++....+..   |         +++|
T Consensus       125 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  204 (452)
T 3n5m_A          125 KIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEV  204 (452)
T ss_dssp             HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHH
Confidence            9876     4   7799999999998776555544322             334442211111   2         8999


Q ss_pred             HHHhh---cCCceEEEEcCC-CCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEc
Q 014492          211 ADAVE---REKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLR  279 (423)
Q Consensus       211 ~~~i~---~~~~~~i~l~~p-~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~  279 (423)
                      ++.+.   ..++++|+++.+ +| ||.+++    ++++.++|+. |++||+||+|.+|...+..  ....+....   +.
T Consensus       205 e~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~d---i~  280 (452)
T 3n5m_A          205 DRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPD---II  280 (452)
T ss_dssp             HHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCS---EE
T ss_pred             HHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCC---EE
Confidence            99886   346778888877 89 998875    5556666666 9999999999988643322  122222223   33


Q ss_pred             cChhhhcccC-ccccccccCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHH
Q 014492          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLF  347 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~--------~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~  347 (423)
                      +|||.++. | +|+||+++++++++.+..        ....++.+++++.++.++|+.   +++.++.++..+..++.|.
T Consensus       281 t~sK~l~~-G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~  359 (452)
T 3n5m_A          281 TMAKGITS-AYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLK  359 (452)
T ss_dssp             EECGGGGT-TSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             eecccccC-CCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            68999985 9 999999999999988743        123477899999999988874   2344444444455555555


Q ss_pred             HHHccCCCCeecCCCceEEEEEeCCCC---------CHHHHHHHHHhCCcEEEeCCC--CCCCCeEEEEecChhhHHHHH
Q 014492          348 KLLKDVPFLNPYPSYSNFILCEVTSGM---------DAKKLKDDLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALM  416 (423)
Q Consensus       348 ~~L~~~~~~~~~p~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~~~~--~~~~~~iRis~~~~~~~~~l~  416 (423)
                      +.+++++.+...++.|.|+++.+.+..         ...++++.|.++||.++++..  ...++++||+++...+.+++.
T Consensus       360 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~  439 (452)
T 3n5m_A          360 EEIGEHPLVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIA  439 (452)
T ss_dssp             HHHTTCTTEEEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHH
T ss_pred             HHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHH
Confidence            555566655555677888888774211         135688888999999998764  334689999765332234444


Q ss_pred             HHHhh
Q 014492          417 ECLMH  421 (423)
Q Consensus       417 ~al~~  421 (423)
                      +++++
T Consensus       440 ~~l~~  444 (452)
T 3n5m_A          440 FVIGT  444 (452)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44444

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.97  E-value=1.5e-29  Score=248.61  Aligned_cols=308  Identities=15%  Similarity=0.155  Sum_probs=217.7

Q ss_pred             EcCCCCCCCCCC----HHHHHHHhcC---CCCCC---CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC
Q 014492           99 KIDANENPYGPP----PEVREALGQL---KFPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD  168 (423)
Q Consensus        99 ~l~~~~~~~~~~----~~v~~al~~~---~~~~~---Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~  168 (423)
                      .++.+++++.++    +.+.+++...   ...+.   |+++...++++++++++|.+ +.+ +++++++++..++.++++
T Consensus        24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~i-~~~sG~~a~~~~l~~~~~  101 (398)
T 2rfv_A           24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE-AGL-ATASGISAITTTLLTLCQ  101 (398)
T ss_dssp             TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCS-EEE-EESSHHHHHHHHHHHHCC
T ss_pred             CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCC-cEE-EECCHHHHHHHHHHHHhC
Confidence            345556666543    3444554411   11122   35566789999999999975 444 455556999999999999


Q ss_pred             CCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          169 PGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                      +||+|+++.|+|+.+...+    +..|++++.+|.+     |++++++.++ +++++|++++|+||||.+++.+++.++|
T Consensus       102 ~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~  175 (398)
T 2rfv_A          102 QGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIA  175 (398)
T ss_dssp             TTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCC-TTEEEEEEESSBTTTTBCCCHHHHHHHH
T ss_pred             CCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHH
Confidence            9999999999999877765    7789999999853     8999999997 6899999999999999999999999999


Q ss_pred             cC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccc-cccccCHHHHH-HHHHhcC---CCCCcHHH
Q 014492          245 EM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQ---PYNVSVAA  318 (423)
Q Consensus       245 ~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~~---~~~~~~~~  318 (423)
                      +. |+++|+||+|..+.... ..    ..+.++++.|+||.++.+|+|+ ||+++++++++ .+.....   .++.+++.
T Consensus       176 ~~~~~~li~De~~~~~~~~~-~~----~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (398)
T 2rfv_A          176 HQQGALLVVDNTFMSPYCQQ-PL----QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFN  250 (398)
T ss_dssp             HHTTCEEEEECTTTCTTTCC-GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHH
T ss_pred             HHcCCEEEEECCCcccccCC-ch----hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHH
Confidence            87 99999999999766532 21    2346799999999998899998 99999998877 5553332   35788899


Q ss_pred             HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--------------Ceec----CCCceEEEEEeCCC-CCHHHH
Q 014492          319 EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--------------LNPY----PSYSNFILCEVTSG-MDAKKL  379 (423)
Q Consensus       319 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--------------~~~~----p~~~~~~~~~~~~~-~~~~~l  379 (423)
                      +.++.++++..   ....++..++.+.+.+.|++.+.              +.+.    .+.++++++++++. .+...+
T Consensus       251 ~~~~~~~l~~~---~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  327 (398)
T 2rfv_A          251 AWLTLRGVKTL---GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRM  327 (398)
T ss_dssp             HHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHH
T ss_pred             HHHHHhhhhhH---HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHH
Confidence            99988888762   23334455566666676665431              1111    13577888898631 122233


Q ss_pred             HHHHHhCCcEEEeCCCC-----------------------CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492          380 KDDLAKMGVMIRHYNNK-----------------------ELKGYVRVSVGK---PEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~-----------------------~~~~~iRis~~~---~~~~~~l~~al~~l  422 (423)
                      .+.+...|+.+++|+.+                       ..++++|||++.   .++.++|.++|+++
T Consensus       328 ~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~  396 (398)
T 2rfv_A          328 INSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA  396 (398)
T ss_dssp             HTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             HHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence            33333346766666321                       116899999985   44555566666543

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.97  E-value=2.9e-30  Score=257.83  Aligned_cols=310  Identities=16%  Similarity=0.158  Sum_probs=221.2

Q ss_pred             CeeEcCCC-CCCCCCCHHHHHHHhcC-----CC-CCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           96 DIVKIDAN-ENPYGPPPEVREALGQL-----KF-PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        96 ~~i~l~~~-~~~~~~~~~v~~al~~~-----~~-~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      +++.++.+ +++++.++.+.++....     .. .+.|   +++...++++.+++++|.+  ++++++|+++++..++. 
T Consensus        90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~--~~i~~~sGt~al~~~l~-  166 (464)
T 1ibj_A           90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKAD--RAFCFTSGMAALSAVTH-  166 (464)
T ss_dssp             HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHT-
T ss_pred             eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHH-
Confidence            46778776 66777777776666531     11 2345   3344567899999999864  66777777889998886 


Q ss_pred             hcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          166 VLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       166 l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                      ++++||+|+++.|+|+.+...    ++..|++++.+|.+     |++++++++. +++++|++++|+||||.+++.+++.
T Consensus       167 ~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~-~~tk~v~l~~p~NptG~v~~l~~i~  240 (464)
T 1ibj_A          167 LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIS  240 (464)
T ss_dssp             TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHHH
T ss_pred             HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhc-cCceEEEEeCCCCCCCEeecHHHHH
Confidence            889999999999999988754    45679999999853     8999999997 6899999999999999999999999


Q ss_pred             HHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc-CccccccccC-HHHHHHHHHhc--CCCCCcH
Q 014492          242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFP-LSIIEYLWRAK--QPYNVSV  316 (423)
Q Consensus       242 ~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G~R~G~i~~~-~~~~~~l~~~~--~~~~~~~  316 (423)
                      ++|+. |+++|+||+|...... ...    ..++++++.|+||.++.+ |+|+||++++ +++++.+....  ..++.++
T Consensus       241 ~la~~~gi~livDea~~~g~~~-~~~----~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~  315 (464)
T 1ibj_A          241 EMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAP  315 (464)
T ss_dssp             HHHHTTTCEEEEECTTTCTTTC-CGG----GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCH
T ss_pred             HHHHHcCCEEEEECCCcccccC-Chh----hcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCH
Confidence            99998 9999999999853221 111    146789999999988644 8999999998 47888877655  3467788


Q ss_pred             HHHHHHHHHhCChH-HHHHHHHHHHHHHHHHH----------HHHccCCCCeecC----CCceEEEEEeCCCCC-HHHHH
Q 014492          317 AAEVAACAALQNPI-YLEKVKEALIKERERLF----------KLLKDVPFLNPYP----SYSNFILCEVTSGMD-AKKLK  380 (423)
Q Consensus       317 ~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~l~----------~~L~~~~~~~~~p----~~~~~~~~~~~~~~~-~~~l~  380 (423)
                      +.+.++.++++... .+++..+......+++.          +.|++++.+.+.+    +.+++++++++ +.+ ...+.
T Consensus       316 ~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~  394 (464)
T 1ibj_A          316 FDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHLV  394 (464)
T ss_dssp             HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHHHH
T ss_pred             HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHHHH
Confidence            88988888887632 22322222222222222          1233333333322    23678999885 322 34577


Q ss_pred             HHHHhCCcEEEeCC------------C----------C-CCCCeEEEEecChhhHHHHHHHHhh
Q 014492          381 DDLAKMGVMIRHYN------------N----------K-ELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       381 ~~L~~~gI~v~~~~------------~----------~-~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      +.|...||.++.|.            .          . ..++++||+++. ++++++.+.|++
T Consensus       395 ~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~-edi~~li~~L~~  457 (464)
T 1ibj_A          395 ETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI-EDVDDLISDLDI  457 (464)
T ss_dssp             HHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS-SCHHHHHHHHHH
T ss_pred             HhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC-CCHHHHHHHHHH
Confidence            77777788887764            1          0 125799999998 667888777765

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.97  E-value=9.4e-30  Score=252.82  Aligned_cols=314  Identities=16%  Similarity=0.139  Sum_probs=217.6

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ...++.++|+..+  .++++ ++|++.+++.+ +...    ..|+.+...++++.+++++|  .++|++++|+++++..+
T Consensus        61 d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a  138 (433)
T 1z7d_A           61 DVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETA  138 (433)
T ss_dssp             ETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHH
Confidence            3456788999875  56777 88999999876 2221    23444456789999999998  57999999999999999


Q ss_pred             HHHhc---------CCC-CeEEEcCCCchhhHHH-HHHCC------------CeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492          163 MRCVL---------DPG-DKIVDCPPTFTMYEFD-AAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP  219 (423)
Q Consensus       163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~~-~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (423)
                      ++.+.         .+| |.|++.+|+|+.+... ....|            ..++.+|.     .|++++++.++.+++
T Consensus       139 l~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~  213 (433)
T 1z7d_A          139 YKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-----DDLEALEEELKDPNV  213 (433)
T ss_dssp             HHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-----TCHHHHHHHHTSTTE
T ss_pred             HHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence            98653         467 9999999999865432 23333            34555553     389999999953678


Q ss_pred             eEEEEcCCCCCcCcCC----CHHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-cc
Q 014492          220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR  291 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~----~~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R  291 (423)
                      ++|+++..+|++|.+.    ..+++.++|+. |++||+||+|.+|...+..  ....+...+++   ||||.+| +| +|
T Consensus       214 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~---t~sK~l~-~G~~~  289 (433)
T 1z7d_A          214 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI---LLGKALS-GGHYP  289 (433)
T ss_dssp             EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred             EEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE---EECcccc-CCCCC
Confidence            8877766678899865    44556666665 9999999999877543322  12222233333   8899999 89 99


Q ss_pred             ccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceE
Q 014492          292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNF  365 (423)
Q Consensus       292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~  365 (423)
                      +||+++++++++.+...  ...|+.+++++.++.++|+..+. ++..++++++++++.+.|+++    +.+...++.|+|
T Consensus       290 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~  368 (433)
T 1z7d_A          290 ISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN-EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLL  368 (433)
T ss_dssp             CEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTE
T ss_pred             eEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeE
Confidence            99999999988776542  23467889999888888864221 245666777777777777654    332334567889


Q ss_pred             EEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          366 ILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       366 ~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      +++++++. .+..++.+.|.++||.+.++.    .+++||+++   +.++++++.++|+
T Consensus       369 ~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~  423 (433)
T 1z7d_A          369 CAIEFKNELVNVLDICLKLKENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIV  423 (433)
T ss_dssp             EEEEECTTTCCHHHHHHHHHHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEccChhHHHHHHHHHHHCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHH
Confidence            99999753 468899999999999999863    579999875   4445555555444

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.97  E-value=5.4e-30  Score=256.52  Aligned_cols=320  Identities=13%  Similarity=0.112  Sum_probs=225.6

Q ss_pred             CCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-C---C--CC-CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-L---K--FP-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~---~--~~-~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..++.++|+..|  .+.++. +|++.+|+.+ +   .  +. .+|+++...++++.++++++.+.++|++|+|+++++..
T Consensus        47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~  126 (459)
T 4a6r_A           47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDT  126 (459)
T ss_dssp             TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred             CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence            456789999887  666764 5889888865 2   2  11 13455556789999999998888999999999999999


Q ss_pred             HHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCC-----CCCCC--------H
Q 014492          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKS-----DFSLN--------V  207 (423)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~-----~~~~d--------~  207 (423)
                      +++.++.        +++.|++..|+|+.+...+...+.             .+..++.+.     ++ .|        +
T Consensus       127 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~  205 (459)
T 4a6r_A          127 MIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAA  205 (459)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHH
Confidence            9998875        468999999999877655544322             233344221     12 45        7


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      ++|++.+.+   .++++|+++.++|++|.+.+    .+++.++|+. |++||+||+|.+|...+..  ....+..++++ 
T Consensus       206 ~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~-  284 (459)
T 4a6r_A          206 RWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLF-  284 (459)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE-
T ss_pred             HHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee-
Confidence            888888863   34566666566677777664    5556666665 9999999999988654321  22233333433 


Q ss_pred             EccChhhhcccCccccccccCHHHHHHHHH-----hcCCCCCcHHHHHHHHHHhCC---hHHHHHHH-HHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-----AKQPYNVSVAAEVAACAALQN---PIYLEKVK-EALIKERERLFK  348 (423)
Q Consensus       278 i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~-----~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~-~~~~~~~~~l~~  348 (423)
                        +|||.++.+|+|+||+++++++++.+..     ....|+.+++++.++.++|+.   +++.++.+ +.....++.|.+
T Consensus       285 --t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~  362 (459)
T 4a6r_A          285 --TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRE  362 (459)
T ss_dssp             --EECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHH
T ss_pred             --ehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence              5789988555999999999999998872     223478899999999999873   34555555 555666666666


Q ss_pred             HHccCCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014492          349 LLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA  414 (423)
Q Consensus       349 ~L~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~  414 (423)
                      .|++++.+...++.|+|+++++.+...           ..++.+.|+++||.+++++     +++||++.   +.+++++
T Consensus       363 ~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~~~~~~t~e~i~~  437 (459)
T 4a6r_A          363 TFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-----DHIVSAPPLVMTRAEVDE  437 (459)
T ss_dssp             HHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHHHHH
T ss_pred             HHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-----CEEEEECCCCCCHHHHHH
Confidence            677676665566778899988863211           6778899999999999874     79999944   4555555


Q ss_pred             HHHHHh
Q 014492          415 LMECLM  420 (423)
Q Consensus       415 l~~al~  420 (423)
                      +.++|+
T Consensus       438 ~l~~l~  443 (459)
T 4a6r_A          438 MLAVAE  443 (459)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554444

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.97  E-value=5.4e-29  Score=248.93  Aligned_cols=314  Identities=12%  Similarity=0.099  Sum_probs=218.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeE
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI  173 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~V  173 (423)
                      ..++|+..+.++.+.++.+.+++....  ..| ++++..+||++++++++.  +++++++|+++++..++++++++||  
T Consensus        42 ~~ylD~~~~~~~~~~~~~~~~a~~~~~--~~y~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~al~~l~~~gd--  115 (456)
T 2ez2_A           42 DIYIDLLTDSGTNAMSDKQWAGMMMGD--EAYAGSENFYHLERTVQELFGF--KHIVPTHQGRGAENLLSQLAIKPGQ--  115 (456)
T ss_dssp             GCSEECSCSSSCCCCCHHHHHHHTTCC--CCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTC--
T ss_pred             cceeeeccccCCccCCHHHHHHhhcch--hhcccChhHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHHHHhCCCCC--
Confidence            456888888877777888888887422  345 556788999999999986  4899999999999999999999999  


Q ss_pred             EEcCCCc-hhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhcC---CceEEEEcCCCC-CcCcCCCHH
Q 014492          174 VDCPPTF-TMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN-PDGSIINDE  238 (423)
Q Consensus       174 l~~~p~y-~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~---~~~~i~l~~p~N-PtG~~~~~~  238 (423)
                      +++.|+| ..+...++..|++++.++.+.          ++.+|+++|++++.+.   ++++|++++|+| |||.+++.+
T Consensus       116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~  195 (456)
T 2ez2_A          116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMA  195 (456)
T ss_dssp             EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHH
T ss_pred             EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHH
Confidence            7888999 787888889999999998652          3688999999999632   248999999999 999999965


Q ss_pred             HHHHHH---cC-CCEEEEccCCcc----------ccCCCchhh----hhccCCcEEEEccChhhhcccCcccccccc-CH
Q 014492          239 DLLKIL---EM-PILVVLDEAYTE----------FSGLESRME----WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PL  299 (423)
Q Consensus       239 ~l~~i~---~~-~~~li~Deay~~----------~~~~~~~~~----~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~~  299 (423)
                      ++++|+   +. |++||+||+|..          +.+.+....    ......+++++ |++|.+ .+| |.||+++ ++
T Consensus       196 ~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~~-~~~-~gG~~~~~~~  272 (456)
T 2ez2_A          196 NMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKDC-LVN-IGGFLCMNDD  272 (456)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTTT-CCS-SCEEEEESCH
T ss_pred             HHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCcccC-CCC-ceeEEEECCH
Confidence            555554   43 999999999986          233332211    12233455555 778854 467 7899998 68


Q ss_pred             HHHHHHHHhcC-------CCCCcHHHHHH-HHHHhCChHHH-HHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEe
Q 014492          300 SIIEYLWRAKQ-------PYNVSVAAEVA-ACAALQNPIYL-EKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEV  370 (423)
Q Consensus       300 ~~~~~l~~~~~-------~~~~~~~~~~a-~~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~  370 (423)
                      ++++.+.....       ..+.+.....+ +...+   +.+ ++..++.+++.+++.+.|++.+...+.|.+++|+|+++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~  349 (456)
T 2ez2_A          273 EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLR---EAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDA  349 (456)
T ss_dssp             HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHH---HHTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEH
T ss_pred             HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEh
Confidence            88887765432       12234333333 33333   222 34455556667778888877643234577889999987


Q ss_pred             C---CCCCHHHH-----HHHH-HhCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHh
Q 014492          371 T---SGMDAKKL-----KDDL-AKMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLM  420 (423)
Q Consensus       371 ~---~~~~~~~l-----~~~L-~~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~  420 (423)
                      +   .+.+..++     .+.| .++||.+.+.+.             ....+++||+++    +.++++++.++|+
T Consensus       350 ~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~  425 (456)
T 2ez2_A          350 RRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGII  425 (456)
T ss_dssp             HHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             HHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHH
Confidence            3   24444555     7777 588998755221             123479999987    3444455544444

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.97  E-value=8.4e-29  Score=242.27  Aligned_cols=281  Identities=17%  Similarity=0.172  Sum_probs=216.1

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~  199 (423)
                      .+|++++..+++++++++++.+ +.|++++| ++++..+++.++++||+|+++.|+|.....    .++..|++++.++.
T Consensus        47 ~~~~~~~~~~l~~~la~~~~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  124 (386)
T 1cs1_A           47 SRRGNPTRDVVQRALAELEGGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ  124 (386)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred             eCCCCccHHHHHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC
Confidence            4567788899999999999976 67777776 899999999999999999999999986333    34668999999985


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                      +     |++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|..+.... ..    ..+.++++
T Consensus       125 ~-----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~-~~----~~~~di~~  193 (386)
T 1cs1_A          125 G-----DEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQN-PL----ALGADLVL  193 (386)
T ss_dssp             T-----CHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-GG----GGTCSEEE
T ss_pred             C-----CHHHHHHhhc-cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-cc----ccCceEEE
Confidence            2     8999999997 689999999999999999999999999987 99999999999876532 11    24567999


Q ss_pred             ccChhhhcccCccc-cccccCH-HHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          279 RTFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       279 ~S~SK~~g~~G~R~-G~i~~~~-~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      .|+||.++.+|.|+ ||+++++ ++++.+......  ++.++..+.++...++   ++....+++.++++.+.+.|++++
T Consensus       194 ~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~~l~~~~  270 (386)
T 1cs1_A          194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLR---TLVPRMELAQRNAQAIVKYLQTQP  270 (386)
T ss_dssp             EETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             EcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999899997 9999976 788877765443  4577887777766664   345566677788888888888765


Q ss_pred             CCe-e-cC----------------CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC--------------------
Q 014492          355 FLN-P-YP----------------SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK--------------------  396 (423)
Q Consensus       355 ~~~-~-~p----------------~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~--------------------  396 (423)
                      .+. . .+                ..++++.+.+++  ..+.+.+.|.++||.++..+..                    
T Consensus       271 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~  348 (386)
T 1cs1_A          271 LVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--DEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPE  348 (386)
T ss_dssp             TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--CHHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHH
T ss_pred             CeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--CHHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHH
Confidence            432 1 12                237788888863  2677888888999999842110                    


Q ss_pred             ------CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492          397 ------ELKGYVRVSVGK---PEHTDALMECLMHL  422 (423)
Q Consensus       397 ------~~~~~iRis~~~---~~~~~~l~~al~~l  422 (423)
                            ..++++||+++.   .++.+.|.++++.+
T Consensus       349 ~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~  383 (386)
T 1cs1_A          349 ARAAAGISETLLRISTGIEDGEDLIADLENGFRAA  383 (386)
T ss_dssp             HHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence                  125899999986   33445555555543

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.97  E-value=8.1e-30  Score=254.48  Aligned_cols=319  Identities=16%  Similarity=0.151  Sum_probs=223.9

Q ss_pred             CCCCCeeEcCCCC--CCCCC-CHHHHHHHhc-CCCC----C-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYGP-PPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~~-~~~v~~al~~-~~~~----~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+..++|+..+.  ++++. +|++.+++.+ +...    . .|+.....++++.++++++.++++|++|+|++++++.+
T Consensus        47 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~a  126 (449)
T 3a8u_X           47 DKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTA  126 (449)
T ss_dssp             TTCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence            3456788987664  55654 7999999876 3221    1 45555567899999999988888999999999999999


Q ss_pred             HHHhcC--------CCCeEEEcCCCchhhHH-HHHHCCC------------eEEEecCCCCC-----CCC--------HH
Q 014492          163 MRCVLD--------PGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSDF-----SLN--------VE  208 (423)
Q Consensus       163 ~~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~v~~~~~~-----~~d--------~~  208 (423)
                      ++.+..        +||+|++.+|+|+.+.. .....|.            .+..++.+..+     ++|        ++
T Consensus       127 l~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~  206 (449)
T 3a8u_X          127 VKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALAD  206 (449)
T ss_dssp             HHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHH
Confidence            987764        67999999999986543 3444331            23444432211     256        99


Q ss_pred             HHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEE
Q 014492          209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL  278 (423)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i  278 (423)
                      +|++.+++   .++++|+++..+|+||.+.+    .+++.++|+. |++||+||+|.+|...+.  .....+..++++  
T Consensus       207 ~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--  284 (449)
T 3a8u_X          207 ELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--  284 (449)
T ss_dssp             HHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--
T ss_pred             HHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--
Confidence            99999863   35666665544678998777    7777778877 999999999987754332  223333333433  


Q ss_pred             ccChhhhcccC-ccccccccCHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Q 014492          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERL  346 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~-----------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l  346 (423)
                       |+||.++ +| +|+||+++++++++.+...           ...++.+++++.++.++|+..+. +...++++++++++
T Consensus       285 -s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~l  361 (449)
T 3a8u_X          285 -CIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-ENLVQSVAEVAPHF  361 (449)
T ss_dssp             -EECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHH
T ss_pred             -EEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHH
Confidence             8899998 57 9999999999999888763           12366788999888888864211 24567778888888


Q ss_pred             HHHHccCC---CCeecCCCceEEEEEeCCCC-----CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014492          347 FKLLKDVP---FLNPYPSYSNFILCEVTSGM-----DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL  415 (423)
Q Consensus       347 ~~~L~~~~---~~~~~p~~~~~~~~~~~~~~-----~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l  415 (423)
                      .+.|++++   .+...++.|+|+|+++++..     +..++.+.|.++||.+++++     +++||++.   +.++++++
T Consensus       362 ~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRis~~~~~t~~~i~~~  436 (449)
T 3a8u_X          362 EKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-----DTLQFGPTFNSKPQDLDRL  436 (449)
T ss_dssp             HHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-----TEEEECCCTTCCHHHHHHH
T ss_pred             HHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-----CEEEEECCCcCCHHHHHHH
Confidence            88887643   22223567889999997432     22378899988999999873     79999954   45555555


Q ss_pred             HHHHh
Q 014492          416 MECLM  420 (423)
Q Consensus       416 ~~al~  420 (423)
                      .++|+
T Consensus       437 l~~l~  441 (449)
T 3a8u_X          437 FDAVG  441 (449)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55544

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.97  E-value=3.2e-29  Score=249.40  Aligned_cols=314  Identities=13%  Similarity=0.066  Sum_probs=227.5

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ...++.++||..|.  ++++ .+|++.+++.+ +...    ..|+.+...++++.+++++|  .++|++++|+++++..+
T Consensus        72 d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~a  149 (439)
T 2oat_A           72 DVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETA  149 (439)
T ss_dssp             ETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHH
Confidence            34567899998864  4666 88999999876 2221    23444557899999999997  57999999999999999


Q ss_pred             HHHhc---------CCC-CeEEEcCCCchhhHH-HHHHCC------------CeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492          163 MRCVL---------DPG-DKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKP  219 (423)
Q Consensus       163 ~~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (423)
                      ++.+.         .+| |.|++.+|+|+.+.. .....|            ..++.+|.     .|++++++.++.+++
T Consensus       150 l~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-----~d~~~le~~l~~~~~  224 (439)
T 2oat_A          150 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-----NDLPALERALQDPNV  224 (439)
T ss_dssp             HHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-----SCHHHHHHHTTSTTE
T ss_pred             HHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-----CCHHHHHHHhCCCCE
Confidence            98764         357 899999999976543 333334            45666663     389999999953577


Q ss_pred             eEEEEcCCCCCcCcCC----CHHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-cc
Q 014492          220 KCIFLTSPNNPDGSII----NDEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR  291 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~----~~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R  291 (423)
                      ++|+++..+|++|.+.    ..+++.++|+. |+++|+||+|.+|...+..  ....+...+++   |+||.++ +| +|
T Consensus       225 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~---t~sK~l~-~G~~~  300 (439)
T 2oat_A          225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV---LLGKALS-GGLYP  300 (439)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred             EEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE---Eeccccc-CCCCC
Confidence            7777766678899765    45566666665 9999999999877543322  12222223333   8999998 68 99


Q ss_pred             ccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC--eecCCCceEEE
Q 014492          292 VGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL--NPYPSYSNFIL  367 (423)
Q Consensus       292 ~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~p~~~~~~~  367 (423)
                      +||+++++++++.+...  ...|+.+++++.++.++|+..+. ++..++++++++++.+.|++++..  ...++.|+|++
T Consensus       301 ~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~  379 (439)
T 2oat_A          301 VSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE-ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNA  379 (439)
T ss_dssp             CEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEE
T ss_pred             eEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEE
Confidence            99999999988776542  23467889999888888864221 356778888999999999886421  12356788999


Q ss_pred             EEeCCC--CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          368 CEVTSG--MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       368 ~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      +++++.  .+..++.+.|.++||.+.++.    ++++||+++   +.++++++.++|+
T Consensus       380 v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~  433 (439)
T 2oat_A          380 IVIKETKDWDAWKVCLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEIIN  433 (439)
T ss_dssp             EEECCCSSCCHHHHHHHHHHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             EEEecCccHHHHHHHHHHHHCCeEEecCC----CCEEEEECccCCCHHHHHHHHHHHH
Confidence            999754  468899999999999999853    589999875   4444555554444

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.97  E-value=4e-30  Score=250.58  Aligned_cols=308  Identities=13%  Similarity=0.080  Sum_probs=212.7

Q ss_pred             CCC-CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCC
Q 014492           93 KPE-DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPG  170 (423)
Q Consensus        93 ~~~-~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~g  170 (423)
                      .+. +++++..+.++.+.++++++++..    +..|..-...+++.+++++|.+ ++++++++|+++++..++.++  +|
T Consensus        25 ~g~~~v~~~~~~~~~~~~~~~v~~a~~~----~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~g   98 (374)
T 2aeu_A           25 KGRDALYDLSGLSGGFLIDEKDKALLNT----YIGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KP   98 (374)
T ss_dssp             TCGGGCEECSSCCCCCCCCHHHHHHHTS----TTHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CC
T ss_pred             cCccceeeecccCCCCCCCHHHHHHHHH----hcCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CC
Confidence            344 689999988889999999999972    1112111346777777888973 478999999999999999977  99


Q ss_pred             CeEEEcCCCchhhHH---HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceE-EEEcCCCCCcC-cCCCHHHHHHHHc
Q 014492          171 DKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC-IFLTSPNNPDG-SIINDEDLLKILE  245 (423)
Q Consensus       171 d~Vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~-i~l~~p~NPtG-~~~~~~~l~~i~~  245 (423)
                      |+|+++.|+|+.+..   .++..|++++.+       .|++++++. . +++++ |++++|||||| ...+.+++.++|+
T Consensus        99 d~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~  169 (374)
T 2aeu_A           99 KKVIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-I-DKDTLVIITGSTMDLKVIELENFKKVINTAK  169 (374)
T ss_dssp             SEEEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCHHHHHHHHHHHH
T ss_pred             CEEEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCcccHHHHHHHHH
Confidence            999999998864332   567789999888       389999988 4 78999 99999999999 6666677777777


Q ss_pred             C-CCEEEEccCCccccC---CC-chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHH
Q 014492          246 M-PILVVLDEAYTEFSG---LE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA  318 (423)
Q Consensus       246 ~-~~~li~Deay~~~~~---~~-~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~  318 (423)
                      . |+++|+||+|..+..   .. +...    .+.+++++|+||.  ++|+|+||+++++++++++......  .+++++.
T Consensus       170 ~~~~~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~--l~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~  243 (374)
T 2aeu_A          170 NKEAIVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKL--MEGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPL  243 (374)
T ss_dssp             HHTCCEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSS--SSSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHH
T ss_pred             HcCCEEEEECCcccccccccccCCccc----cCCcEEEecCccc--ccCcceEEEEECHHHHHHHHHhhccccCCCCHHH
Confidence            6 999999999987641   11 1111    2345889999997  4688999999999999988876544  3578888


Q ss_pred             HHHHHHHhCChH--HHHHHHHHHHHH----HHHHHHHHccC---CCCeec-CCCceE-EEEEeCCCCC---HHHHHHHHH
Q 014492          319 EVAACAALQNPI--YLEKVKEALIKE----RERLFKLLKDV---PFLNPY-PSYSNF-ILCEVTSGMD---AKKLKDDLA  384 (423)
Q Consensus       319 ~~a~~~~l~~~~--~~~~~~~~~~~~----~~~l~~~L~~~---~~~~~~-p~~~~~-~~~~~~~~~~---~~~l~~~L~  384 (423)
                      +.++..+++...  .+++..+..+..    ++.+.+.|..+   .++.+. +..+.+ .|.+.++..+   ..+++..++
T Consensus       244 ~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll  323 (374)
T 2aeu_A          244 LAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLL  323 (374)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHH
Confidence            888888876421  222222222222    45666666554   122322 233333 3444431111   122555554


Q ss_pred             -hCCcEEEeCCC-CCCCCeEEEEecChh----hHHHHHHHHhh
Q 014492          385 -KMGVMIRHYNN-KELKGYVRVSVGKPE----HTDALMECLMH  421 (423)
Q Consensus       385 -~~gI~v~~~~~-~~~~~~iRis~~~~~----~~~~l~~al~~  421 (423)
                       ++||.++++.. +..++++||+++..+    +.+++.++++.
T Consensus       324 ~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~  366 (374)
T 2aeu_A          324 KNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVE  366 (374)
T ss_dssp             HHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHH
T ss_pred             HhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHH
Confidence             78999998765 345679999997533    24566665543

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.97  E-value=3.2e-30  Score=255.94  Aligned_cols=317  Identities=15%  Similarity=0.108  Sum_probs=223.8

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CC--CCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~--~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ..+++++|+..+.  +.++ .+|++.+|+.+ +.  ...+||++...+|+++++++++ .+++|++++|+++++..+++.
T Consensus        50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~  128 (429)
T 3k28_A           50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRL  128 (429)
T ss_dssp             TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHH
Confidence            4577899998874  6677 48999998876 22  1245788788899999999997 678999999999999999987


Q ss_pred             hcC--CCCeEEEcCCCchhhHHHHHH-CCCeE--EEecCCCCCC------------CCHHHHHHHhhc--CCceEEEEcC
Q 014492          166 VLD--PGDKIVDCPPTFTMYEFDAAV-NGAAV--VKVPRKSDFS------------LNVELIADAVER--EKPKCIFLTS  226 (423)
Q Consensus       166 l~~--~gd~Vl~~~p~y~~~~~~~~~-~g~~~--~~v~~~~~~~------------~d~~~l~~~i~~--~~~~~i~l~~  226 (423)
                      +..  +++.|++.+|+|+.+...+.. .|..+  ..+|...+..            -|++++++.+.+  .++++|+++.
T Consensus       129 a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep  208 (429)
T 3k28_A          129 ARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP  208 (429)
T ss_dssp             HHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred             HHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence            653  568899999999754433222 22211  1122111110            189999998863  3566777666


Q ss_pred             CCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       227 p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      ++|++|.+.+    .+++.++|+. |++||+||+|.+| ..+..  ....+....   +.||||.++ +|+|+||+++++
T Consensus       209 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~d---i~t~sK~~~-~G~~iG~~~~~~  283 (429)
T 3k28_A          209 VAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPD---LTCLGKVIG-GGLPVGAYGGKA  283 (429)
T ss_dssp             SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCS---EEEECGGGG-TTSCCEEEEECH
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCc---eehhhhhhc-CCCCeEEEEEcH
Confidence            6777888887    6777777776 9999999999988 43321  122222233   346899998 699999999999


Q ss_pred             HHHHHHHHh-----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----CCCCeecCCCceEEEEEe
Q 014492          300 SIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----VPFLNPYPSYSNFILCEV  370 (423)
Q Consensus       300 ~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~~~~~~~~~  370 (423)
                      ++++.+...     ..+++.+++++.++.++|+..+  ++..++++++++++.+.|++    .+.+...++.|+|+++.+
T Consensus       284 ~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~  361 (429)
T 3k28_A          284 EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT--PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFF  361 (429)
T ss_dssp             HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEES
T ss_pred             HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEE
Confidence            998877652     2357889999999999998644  56777777777777777765    354444567788888887


Q ss_pred             CCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          371 TSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       371 ~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      .+.             ....++++.|.++||.+++++    .+.+|+++. +.++++++.++|+
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~  421 (429)
T 3k28_A          362 TDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ----FEGLFLSTVHSDADIEATIAAAE  421 (429)
T ss_dssp             SSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST----TSCBCCCTTCCHHHHHHHHHHHH
T ss_pred             ecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC----CCCEEEECCCCHHHHHHHHHHHH
Confidence            421             124678888999999999875    457888865 4445555555444

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.97  E-value=9e-29  Score=243.86  Aligned_cols=280  Identities=16%  Similarity=0.152  Sum_probs=213.3

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~  200 (423)
                      +|+++...+|++.+++++|.  +++++++|+++++..++.+++++||+|+++.|+|..+...++    ..|++++.+|.+
T Consensus        77 r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  154 (414)
T 3ndn_A           77 RYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD  154 (414)
T ss_dssp             TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence            45677778999999999995  578888999999999999999999999999999998776654    489999999863


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++|+. |++||+||+|....... ..    ..+.++++.
T Consensus       155 -----d~~~l~~ai~-~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~----~~g~div~~  223 (414)
T 3ndn_A          155 -----DLSQWERALS-VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQ-GF----PLGVDVVVY  223 (414)
T ss_dssp             -----CHHHHHHHTS-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-CG----GGTCSEEEE
T ss_pred             -----CHHHHHHhcC-CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hcCCCeEec
Confidence                 8999999997 689999999999999999999999999987 99999999998432111 11    223458899


Q ss_pred             cChhhhcccC-ccccccccCHHHHH-HHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAG-LRVGYGAFPLSIIE-YLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~~~~~~-~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |+||.+|.+| +++|+++++++.+. .+.....  ....++....++...+   +++....++..++++++.+.|++.+.
T Consensus       224 S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l---~~l~~r~~~~~~~a~~l~~~L~~~p~  300 (414)
T 3ndn_A          224 SGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL---ETLAIRVQHSNASAQRIAEFLNGHPS  300 (414)
T ss_dssp             ETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             cCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999878 89999999988776 5543322  2345565555444444   44666777778899999999988765


Q ss_pred             Ce-e-cCC----------------CceEEEEEeCCC-----CCHHHHHHHHHhCCcEEEeCCC-----------------
Q 014492          356 LN-P-YPS----------------YSNFILCEVTSG-----MDAKKLKDDLAKMGVMIRHYNN-----------------  395 (423)
Q Consensus       356 ~~-~-~p~----------------~~~~~~~~~~~~-----~~~~~l~~~L~~~gI~v~~~~~-----------------  395 (423)
                      +. + +|.                .|.++++.++++     .....|.+.|...++.+..|+.                 
T Consensus       301 v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~  380 (414)
T 3ndn_A          301 VRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGP  380 (414)
T ss_dssp             EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHH
T ss_pred             EeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCH
Confidence            43 2 332                478899999742     2356677777656666655442                 


Q ss_pred             ------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          396 ------KELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       396 ------~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                            ...+++||||++.++ .+++.+.|++
T Consensus       381 ~~~~~~g~~~~~iRlsvG~e~-~~dli~dl~~  411 (414)
T 3ndn_A          381 EGRAAIGLGDGVVRISVGLED-TDDLIADIDR  411 (414)
T ss_dssp             HHHHHTTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred             HHHHhcCCCCCeEEEEeCcCC-HHHHHHHHHH
Confidence                  123679999999865 4677766654

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.97  E-value=2.1e-29  Score=251.78  Aligned_cols=319  Identities=13%  Similarity=0.152  Sum_probs=228.7

Q ss_pred             CCC--CeeEcCCC--CCCCC-CCHHHHHHHhc-C---CCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPE--DIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~--~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +++  .+||+..+  .+.++ .+|++.+|+.+ +   .+.  .+|+++...+|++.++++++...++|++++|++++++.
T Consensus        71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~  150 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEV  150 (457)
T ss_dssp             TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHH
T ss_pred             CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHH
Confidence            667  89999877  56676 57899888875 2   221  23455567799999999998777899999999999999


Q ss_pred             HHHHhcC-------CC-CeEEEcCCCchhhHHHHHHCC--------------CeEEEecC--CCCCCCCHHHHHHHhhc-
Q 014492          162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVNG--------------AAVVKVPR--KSDFSLNVELIADAVER-  216 (423)
Q Consensus       162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g--------------~~~~~v~~--~~~~~~d~~~l~~~i~~-  216 (423)
                      +++.+..       +| +.|++..++|+.+...+...+              ..+..++.  +.....|+++|++.+++ 
T Consensus       151 Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~  230 (457)
T 3tfu_A          151 AAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQH  230 (457)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhC
Confidence            9997764       55 589999999976554444331              12223332  11112478999998863 


Q ss_pred             -CCceEEEEcC-CCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcc
Q 014492          217 -EKPKCIFLTS-PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       217 -~~~~~i~l~~-p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~  287 (423)
                       .++++|+++. ++||+|.+.+    ++++.++|+. |++||+||+|.+|...+.  .....+..++++   ||||.++ 
T Consensus       231 ~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii---t~sK~l~-  306 (457)
T 3tfu_A          231 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM---CVGKALT-  306 (457)
T ss_dssp             GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE---EECGGGG-
T ss_pred             CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE---EEChhhh-
Confidence             4678888887 8999999886    5666677776 999999999998864332  223333344444   8899887 


Q ss_pred             cC-ccccccccCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC---CCC
Q 014492          288 AG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV---PFL  356 (423)
Q Consensus       288 ~G-~R~G~i~~~~~~~~~l~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~  356 (423)
                      .| +|+||+++++++++.+..       ...+|+.+++++.++.++|+..+ -+...++++++++++.+.|+++   +.+
T Consensus       307 gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~v  385 (457)
T 3tfu_A          307 GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLL-GQDWRTRITELAAGLTAGLDTARALPAV  385 (457)
T ss_dssp             TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHHHGGGGGSTTE
T ss_pred             CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            45 799999999999998862       12347889999999988886311 0234555666677777777654   444


Q ss_pred             eecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          357 NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       357 ~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ...++.|+|+++++++..+..++.+.|+++||.+++++     +++||++.   +.++++++.++|++
T Consensus       386 ~~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~~-----~~lRi~p~~~~t~eei~~~l~~L~~  448 (457)
T 3tfu_A          386 TDVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPFR-----NLVYAMPPYICTPAEITQITSAMVE  448 (457)
T ss_dssp             EEEEECSSCEEEEESSCCCHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             eeeecCCeEEEEEECCcccHHHHHHHHHHCCeEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHH
Confidence            44456788999999876678999999999999998754     69999854   45555655555543

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.97  E-value=1.7e-28  Score=242.03  Aligned_cols=316  Identities=15%  Similarity=0.102  Sum_probs=224.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCC-------cchH----HHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYPD-------PESR----RLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~~-------~g~~----~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.++|..+++..  +|++.+++.+..   +..+|+.       ....    .+++.+++++|+++++|++++| ++++..
T Consensus        26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sG-t~a~~~  102 (417)
T 3n0l_A           26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSG-SQANQG  102 (417)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred             cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcceEeccH-HHHHHH
Confidence            458998888766  799999998732   2123332       1222    3555888999998888989888 699999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHH---HHHH--CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEF---DAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++.+++++||+|+++.|+|..+..   ....  .+..++.++.++++.+|++++++.+.+.++++|++++|+|  |.+++
T Consensus       103 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G~~~~  180 (417)
T 3n0l_A          103 VYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--ARVID  180 (417)
T ss_dssp             HHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--CSCCC
T ss_pred             HHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--CccCC
Confidence            999999999999999999976543   2223  3456677777677789999999999756899999888886  89999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC-
Q 014492          237 DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY-  312 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~-  312 (423)
                      .+++.++|+. |++||+||+|.. ..+.+.....+  ...++++.|+||.+  +|.|.||++++ +++++.+......+ 
T Consensus       181 l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~--~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~  256 (417)
T 3n0l_A          181 FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF--PYAHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGI  256 (417)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT--TTCSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc--ccceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcc
Confidence            9999999998 999999999742 22111111111  12348899999976  78899999998 78888887765543 


Q ss_pred             --CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeC-CCCCHHHHHHHHHh
Q 014492          313 --NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVT-SGMDAKKLKDDLAK  385 (423)
Q Consensus       313 --~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~-~~~~~~~l~~~L~~  385 (423)
                        +.+...+.++..++..  .+++++.+++++++++++.+.|++.+ +.+.+  ..++++|+.++ .+.+...+.+.|.+
T Consensus       257 ~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  335 (417)
T 3n0l_A          257 QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRK-FKLVSDGTDNHLVLMSFLDREFSGKDADLALGN  335 (417)
T ss_dssp             CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-ceeccCCCCceEEEEEcccCCCCHHHHHHHHHH
Confidence              4455555555544443  35568888899999999999998854 44433  56778999885 35678889999999


Q ss_pred             CCcEEEeCCCC------CCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          386 MGVMIRHYNNK------ELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       386 ~gI~v~~~~~~------~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      +||.++++..+      ...+.+|+++.       +.++++++.++|++
T Consensus       336 ~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~  384 (417)
T 3n0l_A          336 AGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIAD  384 (417)
T ss_dssp             TTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             cCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHH
Confidence            99999865431      22467999975       24556666666554

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.96  E-value=1.7e-29  Score=244.36  Aligned_cols=285  Identities=16%  Similarity=0.087  Sum_probs=203.2

Q ss_pred             CCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC--eEEEcCCCchhhH---HHHHHCCCeEEEe
Q 014492          124 YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD--KIVDCPPTFTMYE---FDAAVNGAAVVKV  197 (423)
Q Consensus       124 ~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~---~~~~~~g~~~~~v  197 (423)
                      ..|+ +++..+|++++++++|.+ ..++ ++|+++++..++++++.+||  .|+++.+.|....   ..+...|++++.+
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~~~-~~i~-~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v  118 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLGMD-DAVF-FPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILV  118 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHTCS-EEEE-ESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEEC
T ss_pred             ccccCChHHHHHHHHHHHHhCCC-cEEE-ecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEe
Confidence            3464 457889999999999973 3444 46677899999998988888  6777666654322   2455679999999


Q ss_pred             cCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc-CcCCCHHHHHHHHcC----CCEEEEccCCcccc---CCCchhhhh
Q 014492          198 PRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLDEAYTEFS---GLESRMEWV  269 (423)
Q Consensus       198 ~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt-G~~~~~~~l~~i~~~----~~~li~Deay~~~~---~~~~~~~~~  269 (423)
                      +. +++.+|++++++..   ++++|++++||||| |.+++.+++++|++.    |++||+||+|....   .+.......
T Consensus       119 ~~-~~~~~d~~~l~~~~---~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~  194 (357)
T 3lws_A          119 GA-ADRLMTLDEIKALP---DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA  194 (357)
T ss_dssp             SC-TTSCCCHHHHHTCC---SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH
T ss_pred             cC-CCCCcCHHHHhcCc---CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH
Confidence            85 45689999999873   38999999999998 999998877777653    99999999987211   122222222


Q ss_pred             ccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHhcCC----CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 014492          270 KKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP----YNVSVAAEVAACAALQNPIYLEKVKEALIKERE  344 (423)
Q Consensus       270 ~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  344 (423)
                      ...+  +++.|+||.+ ++.|   ||+++++++++.+.+....    .......+.++..+|++  +.+.. +++.++++
T Consensus       195 ~~~d--~~~~s~sK~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~-~~~~~~~~  266 (357)
T 3lws_A          195 GLFD--SIYISFYKGLGGIAG---AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL--RKDRM-GQYYEQAK  266 (357)
T ss_dssp             TTSS--EEEEESSSTTCCSSC---EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH--HTTCH-HHHHHHHH
T ss_pred             hcCC--EEEEeccccCCCCce---EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH--HHHHH-HHHHHHHH
Confidence            2223  4478999998 4334   9999999999888755422    22233334444455532  33333 34577888


Q ss_pred             HHHHHHccCCCCee--cCCCceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecCh---hhHHHHH
Q 014492          345 RLFKLLKDVPFLNP--YPSYSNFILCEVTSG--MDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKP---EHTDALM  416 (423)
Q Consensus       345 ~l~~~L~~~~~~~~--~p~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~~~---~~~~~l~  416 (423)
                      ++.+.|++++++.+  .|++++|+|++++..  .+.+++.+.|.++||.++++..+ ....++|++++..   .+.+++.
T Consensus       267 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~  346 (357)
T 3lws_A          267 QLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRD  346 (357)
T ss_dssp             HHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHH
T ss_pred             HHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHH
Confidence            99999999876665  578899999999743  23678888899999999987543 2334999998732   3568888


Q ss_pred             HHHhhh
Q 014492          417 ECLMHL  422 (423)
Q Consensus       417 ~al~~l  422 (423)
                      +++++|
T Consensus       347 ~al~~l  352 (357)
T 3lws_A          347 AGFARL  352 (357)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888876

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.96  E-value=3.8e-29  Score=249.62  Aligned_cols=320  Identities=15%  Similarity=0.148  Sum_probs=211.6

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..++.++|+..+  .+.++ .+|++.+++.+ +...     ..|+.+...++++.++++++...++|++|+|+++++..+
T Consensus        41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~a  120 (448)
T 3dod_A           41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIA  120 (448)
T ss_dssp             TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHH
Confidence            456778999876  44554 36899988876 3221     123334456888999998877778999999999999999


Q ss_pred             HHHhcC----CC----CeEEEcCCCchhhHHHHHHCCC-------------eEEEecCCCCCCC-----------CHHHH
Q 014492          163 MRCVLD----PG----DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSL-----------NVELI  210 (423)
Q Consensus       163 ~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~v~~~~~~~~-----------d~~~l  210 (423)
                      ++.+..    +|    |+|++..|+|+.+...+...+.             .+..+|.++.+..           |+++|
T Consensus       121 l~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l  200 (448)
T 3dod_A          121 LKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLREL  200 (448)
T ss_dssp             HHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHH
Confidence            998765    44    9999999999866544433222             2344444333333           48899


Q ss_pred             HHHhh--cCCceEEEEcCCC-CCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEcc
Q 014492          211 ADAVE--REKPKCIFLTSPN-NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRT  280 (423)
Q Consensus       211 ~~~i~--~~~~~~i~l~~p~-NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S  280 (423)
                      ++.+.  ..++++|+++.++ |++|.+.+    ++++.++|+. |++||+||+|.+|...+..  ....+..+.   +.+
T Consensus       201 e~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~d---i~t  277 (448)
T 3dod_A          201 AQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPD---LMA  277 (448)
T ss_dssp             HHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS---EEE
T ss_pred             HHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCC---EEE
Confidence            99886  3456777777777 88997665    5666666765 9999999999987643322  122222233   336


Q ss_pred             ChhhhcccC-ccccccccCHHHHHHHHH-------h--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHH
Q 014492          281 FSKRAGLAG-LRVGYGAFPLSIIEYLWR-------A--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLF  347 (423)
Q Consensus       281 ~SK~~g~~G-~R~G~i~~~~~~~~~l~~-------~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~  347 (423)
                      |||.++ +| +|+||+++++++++.+..       .  ...++.+++++.++.++|+.   +++.+..++..+..++.+.
T Consensus       278 ~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~  356 (448)
T 3dod_A          278 AGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQ  356 (448)
T ss_dssp             ECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             eccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence            899998 59 599999999999988865       2  23467899999999988863   3345555555555566665


Q ss_pred             HHHccCCCCeecCCCceEEEEEeCCCCC-----------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHH
Q 014492          348 KLLKDVPFLNPYPSYSNFILCEVTSGMD-----------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALM  416 (423)
Q Consensus       348 ~~L~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~  416 (423)
                      + +.+++.+...++.|.|+++.+++..+           ..++++.|+++||.+++++     +++||+++...+.+++.
T Consensus       357 ~-l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~iRi~~~~~~t~e~i~  430 (448)
T 3dod_A          357 D-LHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-----DVIAFLPPLASTAEELS  430 (448)
T ss_dssp             H-HTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-----TEEEECCCTTCCHHHHH
T ss_pred             H-HhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-----CEEEEECCCCCCHHHHH
Confidence            5 65666444445678899999864322           4788999999999998863     79999755322234444


Q ss_pred             HHHhh
Q 014492          417 ECLMH  421 (423)
Q Consensus       417 ~al~~  421 (423)
                      +++++
T Consensus       431 ~~l~~  435 (448)
T 3dod_A          431 EMVAI  435 (448)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44444

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.96  E-value=8.8e-29  Score=240.56  Aligned_cols=299  Identities=14%  Similarity=0.119  Sum_probs=224.5

Q ss_pred             CCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh---cCCCCeEEEcCCCchhh
Q 014492          108 GPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMY  183 (423)
Q Consensus       108 ~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~  183 (423)
                      +.++++.+++.+. .....+|.+...++|+++++++|.+  ++++|+|+++++..++.++   +++||+|+++.|+|..+
T Consensus        10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~   87 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVAT   87 (375)
T ss_dssp             CCCHHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHH
T ss_pred             CCCHHHHHHHHHHHHcCcccCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhH
Confidence            3568899998773 3333346666789999999999975  8999999999999999999   88999999999999999


Q ss_pred             HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC
Q 014492          184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL  262 (423)
Q Consensus       184 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~  262 (423)
                      ...++..|++++.++.+++..+|++++++.+. +++++|++++|   ||.+.+.+++.++|+. |+++|+||+|..+...
T Consensus        88 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~  163 (375)
T 2fnu_A           88 ANMLLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEY  163 (375)
T ss_dssp             HHHHHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred             HHHHHHCCCEEEEeccCCCCCCCHHHHHhhcC-cCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeE
Confidence            99999999999999987666799999999997 58899888876   9999999999999988 9999999999865421


Q ss_pred             CchhhhhccCCcEEEEccCh--hhhcccCcccccccc-C-HHHHHHHHHhcCC------------------CCCcHHHHH
Q 014492          263 ESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAF-P-LSIIEYLWRAKQP------------------YNVSVAAEV  320 (423)
Q Consensus       263 ~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~-~-~~~~~~l~~~~~~------------------~~~~~~~~~  320 (423)
                      ..  ..+...+ .+++.|+|  |.+|. |  +|++++ + +++++++......                  +..+.+...
T Consensus       164 ~~--~~~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  237 (375)
T 2fnu_A          164 QN--KKVGGFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSA  237 (375)
T ss_dssp             TT--EETTSSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHH
T ss_pred             CC--eeccccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHH
Confidence            11  1122222 37778888  98874 6  788777 4 7788877665321                  133444443


Q ss_pred             HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-----C-ceEEEEEeCC-CC-CHHHHHHHHHhCCcEEEe
Q 014492          321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS-----Y-SNFILCEVTS-GM-DAKKLKDDLAKMGVMIRH  392 (423)
Q Consensus       321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-----~-~~~~~~~~~~-~~-~~~~l~~~L~~~gI~v~~  392 (423)
                      ++...   .+++++..++.+++++++.+.|++++++.+.+.     . ..++++.++. +. +..++.+.|.++||.++.
T Consensus       238 ~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~  314 (375)
T 2fnu_A          238 LGLSQ---LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQV  314 (375)
T ss_dssp             HHHHH---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBC
T ss_pred             HHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccc
Confidence            33333   245678888899999999999999865554322     2 2345777763 23 688899999999999983


Q ss_pred             CCCCC--------------C-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492          393 YNNKE--------------L-------KGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       393 ~~~~~--------------~-------~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      ...+.              .       .+++||+++   +.++++++.++|++
T Consensus       315 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  367 (375)
T 2fnu_A          315 HYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLK  367 (375)
T ss_dssp             CCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             cccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHH
Confidence            21110              1       268999998   56677777777765

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.96  E-value=5.1e-29  Score=248.89  Aligned_cols=325  Identities=14%  Similarity=0.139  Sum_probs=217.7

Q ss_pred             CCCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CC---C-C-CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK---F-P-YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~---~-~-~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      +..++.+||+..+  .+.++. +|++.+++.+ +.   + . ..|+.....+|++.++++++.+ .++|++|+|+++++.
T Consensus        60 d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~  139 (453)
T 4ffc_A           60 DADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVE  139 (453)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHH
Confidence            3456789999887  667764 8899888765 21   1 1 1245555678999999998754 579999999999999


Q ss_pred             HHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCC--------------eEEEecCC----CCCCCC--------HHHHHH
Q 014492          161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRK----SDFSLN--------VELIAD  212 (423)
Q Consensus       161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~----~~~~~d--------~~~l~~  212 (423)
                      .+++....  .++.|++..++|+.+...+...+.              .+..+|.+    +.++.+        ++.+++
T Consensus       140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~  219 (453)
T 4ffc_A          140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIET  219 (453)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHH
Confidence            99986542  458999999999866655443321              34555533    222333        355666


Q ss_pred             HhhcCCceEEEEcCCCCCcC-cCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhh
Q 014492          213 AVEREKPKCIFLTSPNNPDG-SIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       213 ~i~~~~~~~i~l~~p~NPtG-~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~  284 (423)
                      .+. .+..+++++.|+|++| .+.+    .+++.++|+. |++||+||+|.+|...+..  ....+....   +.||||.
T Consensus       220 ~i~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pd---i~t~sK~  295 (453)
T 4ffc_A          220 QIG-AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPD---IVTMAKG  295 (453)
T ss_dssp             HTC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCS---EEEECGG
T ss_pred             hcC-CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcc---hHhhhhh
Confidence            664 3445555566766665 4444    4556666665 9999999999988643321  122222222   4478999


Q ss_pred             hcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec
Q 014492          285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY  359 (423)
Q Consensus       285 ~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  359 (423)
                      ++. |+|+||+++++++++.+....  ..|+.+++++.++.++|+.   +++.++.++..+..++.+.+.+++++.+...
T Consensus       296 ~~~-G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  374 (453)
T 4ffc_A          296 IAG-GMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV  374 (453)
T ss_dssp             GGT-TSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE
T ss_pred             hcC-CcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence            985 999999999999988776443  3478899999999988863   3344445554455555555555566655555


Q ss_pred             CCCceEEEEEeCC-------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          360 PSYSNFILCEVTS-------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       360 p~~~~~~~~~~~~-------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.|+|+++.+.+       .....++.+.|.++||.+++++.  ..+++||+++...+.+++++++++|
T Consensus       375 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l  442 (453)
T 4ffc_A          375 RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT--FGNVIRLLPPLVIGDDLLDEGITAL  442 (453)
T ss_dssp             EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred             EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence            6778899998832       22367788899999999998753  2479999876333334455555443

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.96  E-value=8.1e-28  Score=241.59  Aligned_cols=317  Identities=16%  Similarity=0.105  Sum_probs=229.1

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC----cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPD----PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV  166 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~----~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l  166 (423)
                      .++.|+ +..+ ...|++.+++.+. ...+.|+.    .|    ..++++.+++++|++. .+++++|+++++..++.++
T Consensus        67 ~~~~lg-~~~~-~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~  143 (474)
T 1wyu_B           67 TFYPLG-SCTM-KYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILII  143 (474)
T ss_dssp             SCCCBT-TTCC-CCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHH
T ss_pred             Cccccc-cccc-cCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHH
Confidence            456777 3322 2345666666543 21133422    23    3456777777788764 4678899999998755543


Q ss_pred             ----cCCCC-----eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-CC
Q 014492          167 ----LDPGD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-IN  236 (423)
Q Consensus       167 ----~~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~  236 (423)
                          .++||     +|+++.|+|+.+...++..|++++.+|.++++.+|+++|++++. .++++|++++| ||||.+ .+
T Consensus       144 ~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~-~~t~~v~~~~p-n~~G~~~~~  221 (474)
T 1wyu_B          144 RAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNP-NTLGLFERR  221 (474)
T ss_dssp             HHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSS-CTTSCCCTT
T ss_pred             HHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhC-CCceEEEEECC-CCCcccCCC
Confidence                35787     99999999999999999999999999987788899999999997 68999999998 589998 58


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc-C---ccccccccCHHHHHHHHH-h--
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA-G---LRVGYGAFPLSIIEYLWR-A--  308 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~-G---~R~G~i~~~~~~~~~l~~-~--  308 (423)
                      .+++.++|+. |+++|+||+|..+..+....   ...+.++++.|++|.|+.+ |   .|+||+++++++++.+.. .  
T Consensus       222 l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~---~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~  298 (474)
T 1wyu_B          222 ILEISRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVE  298 (474)
T ss_dssp             HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEE
T ss_pred             HHHHHHHHHHcCCEEEEeCchhhhhccCCCc---ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeee
Confidence            9999999987 99999999997665422111   1224568889999999766 4   699999999988766541 0  


Q ss_pred             ------------------cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--E
Q 014492          309 ------------------KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--I  366 (423)
Q Consensus       309 ------------------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~  366 (423)
                                        ...++.+..++.++..++..  .+++++..+++.++++++.+.|++++ +.+....+.|  +
T Consensus       299 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~  377 (474)
T 1wyu_B          299 RGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEF  377 (474)
T ss_dssp             ECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCE
T ss_pred             ccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cEecCCCCcceEE
Confidence                              01134567778888887764  46788889999999999999998873 4442222233  5


Q ss_pred             EEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492          367 LCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGK---PEHTDALMECLMH  421 (423)
Q Consensus       367 ~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~~---~~~~~~l~~al~~  421 (423)
                      ++.++.+.+..++.+.|.++||.+.....+ ...+++||+++.   .++++++.++|++
T Consensus       378 ~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~  436 (474)
T 1wyu_B          378 VAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA  436 (474)
T ss_dssp             EEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            667755678999999999899986322211 236899999984   5556666666654

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.96  E-value=1.1e-28  Score=247.52  Aligned_cols=281  Identities=16%  Similarity=0.104  Sum_probs=212.7

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe---EEEcCCCchhh----HHHHHHCCCeE-----EEec
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK---IVDCPPTFTMY----EFDAAVNGAAV-----VKVP  198 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~---Vl~~~p~y~~~----~~~~~~~g~~~-----~~v~  198 (423)
                      .+++++.+++++|.++++|++|+|+++++++++.+++++|+.   |+++.|+|+..    ...++..|+++     ..+|
T Consensus       113 ~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~  192 (465)
T 3e9k_A          113 DESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKP  192 (465)
T ss_dssp             THHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred             HHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence            467999999999999999999999999999999999877655   99999999863    34667789885     3345


Q ss_pred             CCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcE
Q 014492          199 RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (423)
Q Consensus       199 ~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~  275 (423)
                      .++++.+|++++++.+++  +++++|++++|+||||.+++.++|.++|+. |+++|+|++|+......    .+...+..
T Consensus       193 ~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~----~~~~~~~D  268 (465)
T 3e9k_A          193 REGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL----YLHDWGVD  268 (465)
T ss_dssp             CTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHTCC
T ss_pred             CCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC----chhhcCCC
Confidence            666778999999999963  478999999999999999999999999987 99999999998443211    11123445


Q ss_pred             EEEccChhhhcccCccccccccCHHHHHHHHHhcC---------------------------CCCCcHHHHHHHHHHhCC
Q 014492          276 IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------------------------PYNVSVAAEVAACAALQN  328 (423)
Q Consensus       276 i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---------------------------~~~~~~~~~~a~~~~l~~  328 (423)
                      +++.|++|.++....++|++++++++++.+.....                           ..+++.....++.++++.
T Consensus       269 ~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~  348 (465)
T 3e9k_A          269 FACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI  348 (465)
T ss_dssp             EEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred             EEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH
Confidence            88999999883223368999998887654431110                           114566666666666654


Q ss_pred             h-HH-HHHHHHHHHHHHHHHHHHHccC----------CCCeec-CC----CceEEEEEeCCCCCHHHHHHHHHhCCcEEE
Q 014492          329 P-IY-LEKVKEALIKERERLFKLLKDV----------PFLNPY-PS----YSNFILCEVTSGMDAKKLKDDLAKMGVMIR  391 (423)
Q Consensus       329 ~-~~-~~~~~~~~~~~~~~l~~~L~~~----------~~~~~~-p~----~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~  391 (423)
                      . ++ +++++++++++++++.+.|+++          +++.+. |.    .++++++.++  .+..++.+.|.++||.++
T Consensus       349 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~--~~~~~l~~~L~~~Gi~v~  426 (465)
T 3e9k_A          349 FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS--VPNKDVFQELEKRGVVCD  426 (465)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC--CTTCCHHHHHHTTTEECE
T ss_pred             HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec--CCHHHHHHHHHHCCEEEe
Confidence            2 22 6888999999999999999874          445543 33    3789999986  456789999999999998


Q ss_pred             eCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          392 HYNNKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       392 ~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      ...    ++++||+++    +.++++++.++|++
T Consensus       427 ~~~----~~~iRis~~~~~~t~edi~~~~~~l~~  456 (465)
T 3e9k_A          427 KRN----PNGIRVAPVPLYNSFHDVYKFTNLLTS  456 (465)
T ss_dssp             EET----TTEEEEBCCTTTCCHHHHHHHHHHHHH
T ss_pred             cCC----CCEEEEeCcccCCCHHHHHHHHHHHHH
Confidence            543    589999983    56666666666654

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.96  E-value=2.4e-28  Score=240.27  Aligned_cols=279  Identities=16%  Similarity=0.158  Sum_probs=201.3

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecC
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR  199 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~  199 (423)
                      .+|++++..+||+++++++|.+ ++|++++|+ +++..++. ++++||+|+++.|+|......    ++..|++++.++.
T Consensus        62 ~r~~~p~~~~l~~~la~~~g~~-~~i~~~sG~-~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~  138 (403)
T 3cog_A           62 SRSGNPTRNCLEKAVAALDGAK-YCLAFASGL-AATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC  138 (403)
T ss_dssp             ----CHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             cCCCCchHHHHHHHHHHHhCCC-cEEEECCHH-HHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC
Confidence            4578888899999999999975 677777775 89999999 899999999999999864433    3568999999986


Q ss_pred             CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-C-CEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492          200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (423)
Q Consensus       200 ~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~-~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (423)
                      +     |++++++.++ +++++|++++|+||||.+++.+++.++|+. | +++|+|++|..+.... ..    ..+.+++
T Consensus       139 ~-----d~~~l~~~i~-~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~-~~----~~~~div  207 (403)
T 3cog_A          139 S-----KIKLLEAAIT-PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR-PL----ALGADIS  207 (403)
T ss_dssp             T-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC-TT----TTTCSEE
T ss_pred             C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC-cc----ccCCeEE
Confidence            3     8999999997 689999999999999999999999999998 8 9999999999775421 11    1356799


Q ss_pred             EccChhhhcccC-ccccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC
Q 014492          278 LRTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV  353 (423)
Q Consensus       278 i~S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~  353 (423)
                      +.|+||.++.+| .|+||++++ +++++.+......  ...+++.+.++...++.   +....++..++...+.+.|++.
T Consensus       208 ~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~n~~~l~~~l~~~  284 (403)
T 3cog_A          208 MYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT---LHVRMEKHFKNGMAVAQFLESN  284 (403)
T ss_dssp             EEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcC
Confidence            999999998766 479999984 7888887765443  34688888888877765   2333444455555555555443


Q ss_pred             C--------------CCeecC----CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC---C------------CC----
Q 014492          354 P--------------FLNPYP----SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY---N------------NK----  396 (423)
Q Consensus       354 ~--------------~~~~~p----~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~---~------------~~----  396 (423)
                      +              +..+.+    ..+.++.+.+++  ..+++.+.|.+.||.++..   +            ..    
T Consensus       285 ~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~  362 (403)
T 3cog_A          285 PWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG--TLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLK  362 (403)
T ss_dssp             TTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS--CHHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCH
T ss_pred             CCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC--CHHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCH
Confidence            2              222111    236666667863  2355666677889876532   1            00    


Q ss_pred             ------C-CCCeEEEEecChh---hHHHHHHHHhh
Q 014492          397 ------E-LKGYVRVSVGKPE---HTDALMECLMH  421 (423)
Q Consensus       397 ------~-~~~~iRis~~~~~---~~~~l~~al~~  421 (423)
                            + .+++||||++.++   ..++|.++|+.
T Consensus       363 ~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~  397 (403)
T 3cog_A          363 NDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKA  397 (403)
T ss_dssp             HHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence                  1 1579999998643   34444455443

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.96  E-value=1e-28  Score=247.72  Aligned_cols=322  Identities=14%  Similarity=0.154  Sum_probs=223.5

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CC-CC-----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~-----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      +..++.+|||..|  .+.++ .+|++.+|+.+ +. ..     .+|+++...+|.+.++++++...++|++++|++++++
T Consensus        51 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~  130 (472)
T 3hmu_A           51 DSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND  130 (472)
T ss_dssp             ETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred             ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence            3457789999887  66676 47899988865 21 11     1345555678999999999877789999999999999


Q ss_pred             HHHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCC------------eEEEecCCCCCC----CC--------HH
Q 014492          161 LIMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGA------------AVVKVPRKSDFS----LN--------VE  208 (423)
Q Consensus       161 ~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~v~~~~~~~----~d--------~~  208 (423)
                      .+++.+..        +++.|++..|+|+.+...+...+.            .+..++.+..+.    .|        ++
T Consensus       131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~  210 (472)
T 3hmu_A          131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARAR  210 (472)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHH
Confidence            99998764        468899999999877665544333            244455322111    34        78


Q ss_pred             HHHHHhhc---CCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEE
Q 014492          209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL  278 (423)
Q Consensus       209 ~l~~~i~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i  278 (423)
                      +|++.+.+   .++++|+++.++|++|.+.+    .+++.++|+. |++||+||+|.+|...+.  .....+..++++  
T Consensus       211 ~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~--  288 (472)
T 3hmu_A          211 ELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM--  288 (472)
T ss_dssp             HHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--
T ss_pred             HHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee--
Confidence            88888853   45677777777888898876    6667777776 999999999998864432  122233334433  


Q ss_pred             ccChhhhcccCccccccccCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHH-HHHHHHHHHHcc-
Q 014492          279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALI-KERERLFKLLKD-  352 (423)
Q Consensus       279 ~S~SK~~g~~G~R~G~i~~~~~~~~~l~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~-  352 (423)
                       +|||.++..|+|+||+++++++++.+..    ...+|+.+++++.++.++|+..+. +...++++ ++.+++.+.|++ 
T Consensus       289 -t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~-~~~~~~~~~~~~~~l~~~L~~l  366 (472)
T 3hmu_A          289 -TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE-ENILDHVRNVAAPYLKEKWEAL  366 (472)
T ss_dssp             -EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHTHHHHHHHHHHGG
T ss_pred             -eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHH
Confidence             5789988555999999999999998831    122478899999999998863211 23344444 555555555543 


Q ss_pred             --CCCCeecCCCceEEEEEeCCCC------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEe---cChhhHHHH
Q 014492          353 --VPFLNPYPSYSNFILCEVTSGM------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSV---GKPEHTDAL  415 (423)
Q Consensus       353 --~~~~~~~p~~~~~~~~~~~~~~------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~---~~~~~~~~l  415 (423)
                        .+.+...++.|+|+++++.+..            ...++.+.|+++||++++++     +++||++   .+.++++++
T Consensus       367 ~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~~~~t~e~i~~~  441 (472)
T 3hmu_A          367 TDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-----DRMIISPPLVITPAEIDEM  441 (472)
T ss_dssp             GGSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-----TEEEECCCTTCCHHHHHHH
T ss_pred             hcCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHH
Confidence              4544445667888888885321            15678889999999999874     8999994   355555555


Q ss_pred             HHHHhh
Q 014492          416 MECLMH  421 (423)
Q Consensus       416 ~~al~~  421 (423)
                      .++|++
T Consensus       442 l~~l~~  447 (472)
T 3hmu_A          442 FVRIRK  447 (472)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555543

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.96  E-value=2.1e-27  Score=227.27  Aligned_cols=270  Identities=16%  Similarity=0.112  Sum_probs=202.3

Q ss_pred             HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHH
Q 014492          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVE  208 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~  208 (423)
                      ++++++++++|.+ +.+++++| ++++..++.+++++||+|+++.|+|+.+...+    +..|++++.++.     .|++
T Consensus         2 ~l~~~la~~~g~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~   74 (331)
T 1pff_A            2 ALEGKIAKLEHAE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPG   74 (331)
T ss_dssp             HHHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTT
T ss_pred             hHHHHHHHHhCCC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHH
Confidence            6899999999976 66666666 79999999999999999999999999876654    458999999984     4788


Q ss_pred             HHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492          209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      ++++.++ +++++|++++|+||||.+++.+++.++|+.  |+++|+||+|..+.... ..    ..++++++.|+||.++
T Consensus        75 ~l~~~i~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~-~~----~~~~d~~~~s~~K~~~  148 (331)
T 1pff_A           75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN-PL----DLGVDIVVHSATKYIN  148 (331)
T ss_dssp             HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC-GG----GGTCSEEEEETTTTTS
T ss_pred             HHHHhhc-CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC-hh----hcCCcEEEEECccccC
Confidence            9999997 689999999999999999999999999986  89999999998654321 11    2456799999999999


Q ss_pred             ccCcc-ccccccCH-HHHHHHHHhcCC-C--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC-------
Q 014492          287 LAGLR-VGYGAFPL-SIIEYLWRAKQP-Y--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP-------  354 (423)
Q Consensus       287 ~~G~R-~G~i~~~~-~~~~~l~~~~~~-~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-------  354 (423)
                      .+|.| +||+++++ ++++.+...... +  +.+++.+.++...++   +.....+...++.+.+.+.|++.+       
T Consensus       149 ~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~  225 (331)
T 1pff_A          149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTL---TLDMRVKRAAENAQKVAEFLHEHKAVKKVYY  225 (331)
T ss_dssp             SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHCTTCCCEEC
T ss_pred             CCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc---hHHHHHHHHHHHHHHHHHHHHcCCCeeEEEC
Confidence            99999 79999998 899988876655 3  567777776666654   333344445555555555554321       


Q ss_pred             -------CCeec----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-------------------------C-C
Q 014492          355 -------FLNPY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-------------------------K-E  397 (423)
Q Consensus       355 -------~~~~~----p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-------------------------~-~  397 (423)
                             ++.+.    +..++++.+.++   +.+++.+.|.++||.++..+.                         . .
T Consensus       226 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~  302 (331)
T 1pff_A          226 PGLPDHPGHEIAKKQMKMFGSMIAFDVD---GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGL  302 (331)
T ss_dssp             TTSTTSTTHHHHHHHCSSCCSEEEEECS---SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTC
T ss_pred             CCCCCCccHHHHHhhCCCCceEEEEEEC---CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCC
Confidence                   11111    124678888885   577888888899998875421                         0 1


Q ss_pred             CCCeEEEEecChh---hHHHHHHHHhh
Q 014492          398 LKGYVRVSVGKPE---HTDALMECLMH  421 (423)
Q Consensus       398 ~~~~iRis~~~~~---~~~~l~~al~~  421 (423)
                      .++++||+++...   +.+++.+++++
T Consensus       303 ~~~~iRis~~~~~t~~~i~~l~~~l~~  329 (331)
T 1pff_A          303 TDNLIRLSVGCENVQDIIDDLKQALDL  329 (331)
T ss_dssp             CTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence            1589999998543   44555555543

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.96  E-value=1.1e-28  Score=242.45  Aligned_cols=315  Identities=16%  Similarity=0.111  Sum_probs=225.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-C-C-CCCCC-------CcchHH----HHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-K-F-PYIYP-------DPESRR----LRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~-~~~Y~-------~~g~~~----lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      ..++++ .+.+++  ++++.+++.+. . . ..+|+       .+...+    +|+++++++|.+++.|++++| ++++.
T Consensus        24 ~~~~~~-~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sG-t~a~~   99 (405)
T 2vi8_A           24 AKIELI-ASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSG-AQANM   99 (405)
T ss_dssp             HSEECC-TTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHH
T ss_pred             cceeec-cCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCc-HHHHH
Confidence            345555 445555  89999999873 2 1 22222       122334    446999999987655656777 99999


Q ss_pred             HHHHHhcCCCCeEEEcCCCchhhHH-H--HHHCC--CeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC
Q 014492          161 LIMRCVLDPGDKIVDCPPTFTMYEF-D--AAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~  234 (423)
                      .++.+++++||.|+++.|+|+.+.. .  +...|  .+++.++.+ +++.+|++++++.+.+.++++|++ +|+|. |..
T Consensus       100 ~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~  177 (405)
T 2vi8_A          100 AVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRI  177 (405)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSC
T ss_pred             HHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-Ccc
Confidence            9999999999999999999986642 1  11223  478888764 567899999999997447888887 45553 577


Q ss_pred             CCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhcCC
Q 014492          235 INDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       235 ~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      .+.+++.++|+. |+++|+||+|..+.. .+.....+.  ...++++|+||.++ +.|   ||+++++++++.+......
T Consensus       178 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g---G~~~~~~~~~~~l~~~~~~  252 (405)
T 2vi8_A          178 IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP--YAHFVTTTTHKTLRGPRG---GMILCQEQFAKQIDKAIFP  252 (405)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSSTTCCCSC---EEEEECHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccc--cCCEEEEeccccCCCCCC---eEEEEcHHHHHHHHhhhcc
Confidence            789999999987 999999999984321 111111111  22388999999987 556   9999999999888776544


Q ss_pred             CC---CcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C-CCceEEEEEeCC-CCCHHHHHHHH
Q 014492          312 YN---VSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-P-SYSNFILCEVTS-GMDAKKLKDDL  383 (423)
Q Consensus       312 ~~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~~~~~~~~~-~~~~~~l~~~L  383 (423)
                      +.   .+.....++.++++.  .+++++.+++++++++++.+.|++++ +.+. | +.++++|+.++. +.+..++.+.|
T Consensus       253 ~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  331 (405)
T 2vi8_A          253 GIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEG-FTLVSGGTDNHLLLVDLRPQQLTGKTAEKVL  331 (405)
T ss_dssp             TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCCceEEEEEccCCCCCHHHHHHHH
Confidence            32   344455555566653  35788899999999999999999884 4543 3 468899999874 45788999999


Q ss_pred             HhCCcEEEeCCC------CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492          384 AKMGVMIRHYNN------KELKGYVRVSVGK-------PEHTDALMECLMH  421 (423)
Q Consensus       384 ~~~gI~v~~~~~------~~~~~~iRis~~~-------~~~~~~l~~al~~  421 (423)
                      .++||.++++..      ...++++||+++.       .++++++.++|++
T Consensus       332 ~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~  382 (405)
T 2vi8_A          332 DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL  382 (405)
T ss_dssp             HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHH
Confidence            999999998641      2235789999984       6666666666654

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.96  E-value=5.7e-28  Score=245.22  Aligned_cols=282  Identities=14%  Similarity=0.091  Sum_probs=214.7

Q ss_pred             HHHHHHHHHhCCCC--CcE--EEeCCHHHHHHHHHHHhcCCC--------CeEEEcCCCchhhHHHHHHCCCeEEEecCC
Q 014492          133 RLRAALAKDSGLES--DHI--LVGCGADELIDLIMRCVLDPG--------DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK  200 (423)
Q Consensus       133 ~lr~~ia~~~g~~~--~~i--~~t~G~~~al~~~~~~l~~~g--------d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~  200 (423)
                      ++++.+++++|.++  +++  ++|+|+++++..+++++.++|        |+|+++.|+|..+...++..|++++.+|.+
T Consensus       143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~  222 (514)
T 3mad_A          143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD  222 (514)
T ss_dssp             HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC
T ss_pred             HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC
Confidence            45666788888764  677  999999999999999988776        899999999999999999999999999988


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-----Cc--hhhhhccC
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKH  272 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-----~~--~~~~~~~~  272 (423)
                      .++.+|+++|+++++ .++++|++++|+||||.+.+.++|.+||+. |++||+||+|.++...     +.  ........
T Consensus       223 ~~~~~d~~~Le~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~  301 (514)
T 3mad_A          223 ADYRADVAAMREAIT-PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLE  301 (514)
T ss_dssp             TTSCBCHHHHHHHCC-TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTST
T ss_pred             CCCCCCHHHHHHHhc-cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCC
Confidence            888999999999997 689999999999999999999999999998 9999999999976431     00  00111123


Q ss_pred             CcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC-------------CCCCcHH---HHHHHHHHhCChHHHHHHH
Q 014492          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-------------PYNVSVA---AEVAACAALQNPIYLEKVK  336 (423)
Q Consensus       273 ~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~-------------~~~~~~~---~~~a~~~~l~~~~~~~~~~  336 (423)
                      +.++++.|++|.+ .+|.++|+++++++..........             ..+.+..   ++.++...+. .+++++..
T Consensus       302 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~-~~~~~~~~  379 (514)
T 3mad_A          302 GVTSVSADTHKYG-YGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLG-EEGYLDAT  379 (514)
T ss_dssp             TCCEEEECTTTTT-CCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             CCcEEEECchhcc-CCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHh-HHHHHHHH
Confidence            4568889999975 478899999887765543221110             1122333   3333333332 35578889


Q ss_pred             HHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhH
Q 014492          337 EALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHT  412 (423)
Q Consensus       337 ~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~  412 (423)
                      +++.++++++.+.|++++++.+.+...+++++..+ +.+..++.+.|.++||.+....   .++++|++++    ..+++
T Consensus       380 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~g~~---~~~~~Ri~~~~~~~~~e~i  455 (514)
T 3mad_A          380 RRILQAADRLKAGVRAIPSLKILGDPLWVIAVASD-ELNIYQVMEEMAGRGWRLNGLH---RPPAFHVALTLRHTEPGVV  455 (514)
T ss_dssp             HHHHHHHHHHHHHHHTSTTCEESSCCSSEEEEECS-SSCHHHHHHHHHTTTCBCEEET---TTTEEEEECCGGGGSTTHH
T ss_pred             HHHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeCC-CCCHHHHHHHHHhcCCEeccCC---CCCeEEEEEecCCCCHHHH
Confidence            99999999999999998767765544567777764 5788999999999999884332   2578999987    33556


Q ss_pred             HHHHHHHhh
Q 014492          413 DALMECLMH  421 (423)
Q Consensus       413 ~~l~~al~~  421 (423)
                      +++.++|++
T Consensus       456 ~~~l~~L~~  464 (514)
T 3mad_A          456 DRFLADLQD  464 (514)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666666554

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.96  E-value=6.3e-28  Score=238.49  Aligned_cols=316  Identities=13%  Similarity=0.143  Sum_probs=212.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCC------Ccc----hHH-HHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYP------DPE----SRR-LRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~------~~g----~~~-lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+++..+++..  +|++.+++.+..   +..+|+      ...    ..+ .++.+++++|.+.. .++++|+++++..
T Consensus        33 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~v~~~~Gs~a~~~  109 (425)
T 3ecd_A           33 SQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHA-NVQPHSGAQANGA  109 (425)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred             cceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCc-eeecCchHHHHHH
Confidence            458998888766  799999998632   112222      111    122 34667788887643 2457788889999


Q ss_pred             HHHHhcCCCCeEEEcCCCchh---hHHHHHHCCC--eEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTM---YEFDAAVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.+++++||+|+++.|+|..   +.......|.  +++.++.+ +++.+|++++++.+.+.++++|++++|+||  ...
T Consensus       110 al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~  187 (425)
T 3ecd_A          110 VMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAYP--RKL  187 (425)
T ss_dssp             HHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCCC--SCC
T ss_pred             HHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccCC--CcC
Confidence            999999999999999999986   3222223444  55666654 457899999999997568999999999995  567


Q ss_pred             CHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC
Q 014492          236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY  312 (423)
Q Consensus       236 ~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~  312 (423)
                      +.+++.++|+. |++||+||+|.. +.+.+........  ..+++.|+||.+  +|.|.||++++ +++.+.+.......
T Consensus       188 ~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~  263 (425)
T 3ecd_A          188 DFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--AHVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPG  263 (425)
T ss_dssp             CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--CSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--CcEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCcc
Confidence            88999999987 999999999643 2222221111211  238899999976  67899999998 56777776654442


Q ss_pred             ---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCceEEEEEeCC-CCCHHHHHHHHH
Q 014492          313 ---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTS-GMDAKKLKDDLA  384 (423)
Q Consensus       313 ---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~~~~~~~~~-~~~~~~l~~~L~  384 (423)
                         +.+...+.++..++..  .+++++.+++++++++++.+.|++.++ .+.  ++.++++|+.+++ +.+...+.+.|.
T Consensus       264 ~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  342 (425)
T 3ecd_A          264 LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGV-DLVTGGTDNHLLLVDLRPKGLKGAQVEQALE  342 (425)
T ss_dssp             ---CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECGGGTCCHHHHHHHHH
T ss_pred             ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC-eeccCCCCceEEEEEeCCCCCCHHHHHHHHH
Confidence               3444444444444432  356788889999999999999988763 433  2567889998864 567888889998


Q ss_pred             hCCcEEEeCCC------CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          385 KMGVMIRHYNN------KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       385 ~~gI~v~~~~~------~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      ++||.++++..      +...+++||++.       ..++++++.++|++
T Consensus       343 ~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~  392 (425)
T 3ecd_A          343 RAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE  392 (425)
T ss_dssp             HTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence            99999994332      223468999853       24566666666654

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.96  E-value=1.6e-28  Score=243.27  Aligned_cols=312  Identities=18%  Similarity=0.104  Sum_probs=216.4

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ..++.++||..+.  ++++ ++|++.+++.+ +..  .++|+.....++++.++++++ .+++|++++|+++++..+++.
T Consensus        49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~  127 (424)
T 2e7u_A           49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAPSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRL  127 (424)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            4567789998775  5555 58999988876 322  234565556789999999986 678999999999999999985


Q ss_pred             ---hcCCCCeEEEcCCCchhhHHHHH--------------HCCC------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492          166 ---VLDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (423)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (423)
                         +.+ ++.|++.+|+|+.+...+.              ..|+      .++.+|.     .|++++++.+++  .+++
T Consensus       128 ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~  201 (424)
T 2e7u_A          128 ARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRGEEIA  201 (424)
T ss_dssp             HHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHGGGEE
T ss_pred             HHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCCCCEE
Confidence               444 5789999999986543221              1122      3555552     389999998863  3455


Q ss_pred             EEEEcCCCCC-cCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCcccc
Q 014492          221 CIFLTSPNNP-DGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (423)
Q Consensus       221 ~i~l~~p~NP-tG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G  293 (423)
                      +|+ ++|+|+ ||.+.+    .+++.++ +. |++||+||+|.+|..+... ....+...++   .||||.+| +|+|+|
T Consensus       202 ~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G  275 (424)
T 2e7u_A          202 AII-FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDL---VTLGKILG-GGLPAA  275 (424)
T ss_dssp             EEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSE---EEECGGGG-TTSSCE
T ss_pred             EEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcch---hhhhhhhh-CCcceE
Confidence            555 556554 998876    6666777 66 9999999999987432211 1222223333   38999999 699999


Q ss_pred             ccccCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCce
Q 014492          294 YGAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSN  364 (423)
Q Consensus       294 ~i~~~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~  364 (423)
                      |+++++++++.+...     ...|+.|++++.++.++|+..+..++..++++++++++.+.|+++    +.....++.|+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~  355 (424)
T 2e7u_A          276 AYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGS  355 (424)
T ss_dssp             EEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred             EEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeece
Confidence            999999998877652     234678899999888888642212456777778888888877664    54333456788


Q ss_pred             EEEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          365 FILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       365 ~~~~~~~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      |+|+++++.             .+..++.+.|.++||.+++++.    ..+|+++. +.++++++.++|+
T Consensus       356 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~~~i~~~l~~l~  421 (424)
T 2e7u_A          356 MITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF----EAAFLSVAHREEDVEKTLEALR  421 (424)
T ss_dssp             EEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS----SCEECCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC----CceEeeccCCHHHHHHHHHHHH
Confidence            999998641             1256788889999999998752    35777754 3444444444444

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.96  E-value=5e-28  Score=238.83  Aligned_cols=316  Identities=14%  Similarity=0.122  Sum_probs=216.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCC---CCCCCCC------cc-----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLK---FPYIYPD------PE-----SRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~---~~~~Y~~------~g-----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.+.+..+++.  .+|++.+++.+..   ...+|+.      ..     ....++.+++++|+++++|++++| ++++..
T Consensus        31 ~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sG-s~a~~~  107 (420)
T 3gbx_A           31 EHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSG-SQANFA  107 (420)
T ss_dssp             HSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSH-HHHHHH
T ss_pred             cceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCc-HHHHHH
Confidence            34777777665  5899999997631   1123322      11     123456888899998777877777 679999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhH---HHHHH--CCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYE---FDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~--~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++.+++++||+|+++.|+|..+.   .....  .+...+.++.+.++.+|++++++++.+.++++|++++|+||  ...+
T Consensus       108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~  185 (420)
T 3gbx_A          108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GVVD  185 (420)
T ss_dssp             HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SCCC
T ss_pred             HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--CccC
Confidence            99999999999999999997633   21112  34566677766777899999999997557999999999997  4788


Q ss_pred             HHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccCH---HHHHHHHHhcCC
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL---SIIEYLWRAKQP  311 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~---~~~~~l~~~~~~  311 (423)
                      .+++.++|+. |+++|+||+|.... ..+......  ....+++.|+||.++  |.+.||+++++   ++.+.+.....+
T Consensus       186 l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~  261 (420)
T 3gbx_A          186 WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV--PHAHVVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFP  261 (420)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST--TTSSEEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHcCCEEEEECCcchhceecccCCccc--ccCCEEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCC
Confidence            9999999987 99999999986332 111111111  123488999999884  55669999987   777777665444


Q ss_pred             C---CCcHHHHHHHHHHhC-C-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeCC-CCCHHHHHHHH
Q 014492          312 Y---NVSVAAEVAACAALQ-N-PIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS-GMDAKKLKDDL  383 (423)
Q Consensus       312 ~---~~~~~~~~a~~~~l~-~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~~-~~~~~~l~~~L  383 (423)
                      +   +.+...+.++..++. . .+++++.+++++++++++.+.|++.+ +.+.+  ..++++|+.++. +.+...+.+.|
T Consensus       262 ~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  340 (420)
T 3gbx_A          262 SAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRG-YKVVSGGTENHLFLLDLVDKNLTGKEADAAL  340 (420)
T ss_dssp             ---CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSSSEEEEECGGGTCCHHHHHHHH
T ss_pred             CCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcC-CeeccCCCCCeEEEEEcCCCCCCHHHHHHHH
Confidence            2   334444444443332 2 45678889999999999999998865 44433  578899998863 56788888889


Q ss_pred             HhCCcEEEeCC------CCCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492          384 AKMGVMIRHYN------NKELKGYVRVSVGK-------PEHTDALMECLMH  421 (423)
Q Consensus       384 ~~~gI~v~~~~------~~~~~~~iRis~~~-------~~~~~~l~~al~~  421 (423)
                      .++||.+.+..      .+...+.+||++..       .++++++.++|++
T Consensus       341 ~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~  391 (420)
T 3gbx_A          341 GRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCD  391 (420)
T ss_dssp             HHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHH
Confidence            89999999821      12234569999852       4556666666654

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.96  E-value=3.3e-28  Score=241.17  Aligned_cols=318  Identities=17%  Similarity=0.133  Sum_probs=216.3

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +..+++++|+..+.  ++++ .+|++.+++.+ +...  +.|+++...+++++++++++ ++++|++++|+++++..+++
T Consensus        48 d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~  126 (427)
T 3fq8_A           48 DVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLR  126 (427)
T ss_dssp             ETTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHH
Confidence            34567899998875  5666 48999998876 3222  33555567789999999998 78899999999999999995


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHHHHC-CC-------------------eEEEecCCCCCCCCHHHHHHHhhcC--Cce
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------------AVVKVPRKSDFSLNVELIADAVERE--KPK  220 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------------~~~~v~~~~~~~~d~~~l~~~i~~~--~~~  220 (423)
                      ...  ..++.|++..|+|+.+...+... |.                   .++.+|.     -|++++++.+++.  +++
T Consensus       127 ~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~  201 (427)
T 3fq8_A          127 IMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-----NDLEAVKALFAENPGEIA  201 (427)
T ss_dssp             HHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-----TCHHHHHHHHHHSTTTEE
T ss_pred             HHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-----CCHHHHHHHHHhCCCCEE
Confidence            321  23578999999997533222111 11                   1333332     1899999998742  678


Q ss_pred             EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCcccccc
Q 014492          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG  295 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i  295 (423)
                      +|+++.++|++|.+.+    .+++.++|+. |++||+||+|.+| ..+.. ......+...-+.|+||.++ +|+|+||+
T Consensus       202 ~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~di~t~sK~~~-~G~~~G~~  278 (427)
T 3fq8_A          202 GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPDLTTLGKIIG-GGLPVGAY  278 (427)
T ss_dssp             EEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCSEEEECGGGG-TTSSCEEE
T ss_pred             EEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCChhhhhhhhh-CCcceEEE
Confidence            8888888889999998    7888888876 9999999999988 43321 11111111122458899999 89999999


Q ss_pred             ccCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEE
Q 014492          296 AFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFIL  367 (423)
Q Consensus       296 ~~~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~  367 (423)
                      ++++++++.+...     ..+++.+++++.++.++|+   ++++.++.++..+..++.+.+.+.+.+.....++.+++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  358 (427)
T 3fq8_A          279 GGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFG  358 (427)
T ss_dssp             EECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEE
T ss_pred             EEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEE
Confidence            9999999887652     2346779999998888885   2334444444444444444444444554334456788999


Q ss_pred             EEeCCC-CC------------HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492          368 CEVTSG-MD------------AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  421 (423)
Q Consensus       368 ~~~~~~-~~------------~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  421 (423)
                      +.+++. ..            ..++.+.|.++||.+++++.    ..+|+++. +.++++++.++|++
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l~~  422 (427)
T 3fq8_A          359 FFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAAART  422 (427)
T ss_dssp             EESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred             EEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHHHHH
Confidence            988632 11            45788899999999998763    34555544 44455555555543

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.96  E-value=9.9e-29  Score=246.72  Aligned_cols=326  Identities=15%  Similarity=0.120  Sum_probs=214.8

Q ss_pred             CCCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-CCCC-----CCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~~-----~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      +.+++.++|+..+  .+.++. +|++.+++.+ +...     ..|+.....+|.+.+++.++.. .++|++|+|+++++.
T Consensus        57 d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~  136 (451)
T 3oks_A           57 DVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVE  136 (451)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHH
T ss_pred             ECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHH
Confidence            3456789999887  667765 7899988876 2221     1234445568888898888753 579999999999999


Q ss_pred             HHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCC--------------eEEEecCCCCC-----CC--------CHHHHH
Q 014492          161 LIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGA--------------AVVKVPRKSDF-----SL--------NVELIA  211 (423)
Q Consensus       161 ~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~v~~~~~~-----~~--------d~~~l~  211 (423)
                      .+++....  .++.|++..++|+.+...+...+.              .+..+|.+..+     +.        +++.++
T Consensus       137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  216 (451)
T 3oks_A          137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAI  216 (451)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHH
Confidence            99986653  348899999999866655443321              35555543110     11        244444


Q ss_pred             HHhhc---CCceEEEEcCCCCC-cCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEcc
Q 014492          212 DAVER---EKPKCIFLTSPNNP-DGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRT  280 (423)
Q Consensus       212 ~~i~~---~~~~~i~l~~p~NP-tG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S  280 (423)
                      +.+.+   .+..+++++.|.|+ .|.+.+    ++++.++|+. |++||+||+|.+|...+..  ....+..+.++   |
T Consensus       217 ~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~---t  293 (451)
T 3oks_A          217 TVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI---V  293 (451)
T ss_dssp             HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---E
T ss_pred             HHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee---e
Confidence            44431   23344444555544 455555    5667777776 9999999999988643322  12222223333   8


Q ss_pred             ChhhhcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          281 FSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       281 ~SK~~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |||.++ .|+|+||+++++++++.+...  ...|+.+++++.++.++|+.   +++.++.++..+..++.|.+.+++++.
T Consensus       294 ~sK~l~-~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  372 (451)
T 3oks_A          294 TAKGIA-GGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDR  372 (451)
T ss_dssp             ECGGGG-TTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             ehhhhh-CCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            899998 499999999999998877643  33478899999999988863   234444444444555555555555665


Q ss_pred             CeecCCCceEEEEEeC-------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          356 LNPYPSYSNFILCEVT-------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       356 ~~~~p~~~~~~~~~~~-------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +...++.|.|+++.+.       +..+..++.+.|.++||.+++++.  ..+++||+++...+.+++++++++|
T Consensus       373 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l  444 (451)
T 3oks_A          373 IGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT--YGNVVRFLPPLSIGDDLLNEGLDVL  444 (451)
T ss_dssp             EEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHHH
T ss_pred             eEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC--CCCEEEEECCCCCCHHHHHHHHHHH
Confidence            5555667889998883       222467788999999999998753  2478999876433334555555543

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.96  E-value=7.5e-27  Score=228.69  Aligned_cols=276  Identities=16%  Similarity=0.139  Sum_probs=208.4

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~  200 (423)
                      +|+++...++++++++++|.+  +.++++++++++..++.+++++||+|+++.|+|..+...    ++..|++++.++. 
T Consensus        55 ~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-  131 (389)
T 3acz_A           55 RLGNPTVEQFEEMVCSIEGAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT-  131 (389)
T ss_dssp             TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-
T ss_pred             CCCChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-
Confidence            456777889999999999975  455566667999999998899999999999999875554    5778999999985 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          .|++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+|++|..+.... ..    ..+.++++.
T Consensus       132 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~-~~----~~~~di~~~  201 (389)
T 3acz_A          132 ----SDVEKVKAAWK-PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK-PL----ELGADIALH  201 (389)
T ss_dssp             ----TCHHHHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-GG----GTTCSEEEE
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC-cc----ccCCeEEEE
Confidence                48999999997 689999999999999999999999999998 99999999998765422 22    145669999


Q ss_pred             cChhhhcccCccc-cccccCH-HHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAGLRV-GYGAFPL-SIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G~R~-G~i~~~~-~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |+||.++.+|.|+ ||+++++ ++++.+.....  ..+.++..+.++...++.   +....++..++.+.+.+.|++.+.
T Consensus       202 S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~~~~~~~~~l~~~l~~~~~  278 (389)
T 3acz_A          202 SVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT---LPIRMQIHMENGLKVAKFLEQHEK  278 (389)
T ss_dssp             ETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH---HHHHHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999998 9999998 88888876553  345677777777777754   233444555666677777766532


Q ss_pred             Ce-e-c----------------CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------------
Q 014492          356 LN-P-Y----------------PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------------  396 (423)
Q Consensus       356 ~~-~-~----------------p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~---------~~------------  396 (423)
                      +. + +                .+.++++.+.++ +  .+++.+.|.+.||.++..+         .+            
T Consensus       279 v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~-~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~  355 (389)
T 3acz_A          279 IVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK-S--FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENI  355 (389)
T ss_dssp             EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES-S--HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHH
T ss_pred             eeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC-C--HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHH
Confidence            21 0 1                123678888886 2  5666666778899887631         11            


Q ss_pred             -----CCCCeEEEEecChhhHHHHHHHHh
Q 014492          397 -----ELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       397 -----~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                           ..+++||||++.++ .+++.+.++
T Consensus       356 ~~~~g~~~~~iRlsvg~~~-~~~li~~l~  383 (389)
T 3acz_A          356 MRKQGITPELVRISVGIEN-VDDIIADLK  383 (389)
T ss_dssp             HHHHTCCTTEEEEECCSSC-HHHHHHHHH
T ss_pred             HHhcCCCcCeEEEEeccCC-HHHHHHHHH
Confidence                 11579999999764 455555444

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.96  E-value=2.6e-27  Score=236.51  Aligned_cols=310  Identities=14%  Similarity=0.038  Sum_probs=224.9

Q ss_pred             CCCHHHHHHHhc-CCC-CCCC-CCcch----HHHHHHHHHHhCCCCCc-----EEEeCCHHHHHHHHHHHhcC-------
Q 014492          108 GPPPEVREALGQ-LKF-PYIY-PDPES----RRLRAALAKDSGLESDH-----ILVGCGADELIDLIMRCVLD-------  168 (423)
Q Consensus       108 ~~~~~v~~al~~-~~~-~~~Y-~~~g~----~~lr~~ia~~~g~~~~~-----i~~t~G~~~al~~~~~~l~~-------  168 (423)
                      .++|.+.+++.+ +.. ...| ..++.    .++++.+++++|++.++     +++|+|+++++.+++.+++.       
T Consensus        53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~  132 (452)
T 2dgk_A           53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME  132 (452)
T ss_dssp             CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence            345788888875 322 1223 23343    35666678888987765     99999999999999887754       


Q ss_pred             -CC-----CeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHH
Q 014492          169 -PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL  241 (423)
Q Consensus       169 -~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~  241 (423)
                       +|     +.|+++. +|..+...++..|++++.+|.++ ++.+|+++|+++++ +++++|++++|+||||.+.+.++|.
T Consensus       133 ~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I~  210 (452)
T 2dgk_A          133 AAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTIGVVPTFGVTYTGNYEFPQPLH  210 (452)
T ss_dssp             HTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEEEEECBBSCTTTCBBCCHHHHH
T ss_pred             hcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHH
Confidence             55     5899999 99999999999999999999765 68999999999997 6899999999999999999999999


Q ss_pred             HHHcC-------CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccccccCH-HHH-HHHHHhc
Q 014492          242 KILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SII-EYLWRAK  309 (423)
Q Consensus       242 ~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~-~~l~~~~  309 (423)
                      ++|+.       ++++++|++|..+..   .+.........+-..++.|++| |+++|.++||+++++ +.+ +.+....
T Consensus       211 ~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~~~~~~~~~~  289 (452)
T 2dgk_A          211 DALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEALPQELVFNV  289 (452)
T ss_dssp             HHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGGSCGGGCEEE
T ss_pred             HHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHHHHHHhccCc
Confidence            99986       899999999997642   1111111112234567788899 777899999999854 333 3321111


Q ss_pred             CC-----------CCC---cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C----CCceEEEEEe
Q 014492          310 QP-----------YNV---SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-P----SYSNFILCEV  370 (423)
Q Consensus       310 ~~-----------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p----~~~~~~~~~~  370 (423)
                      ..           ++.   ..+.+.++...+. .+.+++..++..++++++.+.|++++++.+. |    ...+++.+++
T Consensus       290 ~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~  368 (452)
T 2dgk_A          290 DYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKL  368 (452)
T ss_dssp             CCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEE
T ss_pred             cccCCCCCCcccCCCChhHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEe
Confidence            10           111   3344555555553 3557888899999999999999998765543 3    4567888888


Q ss_pred             CCC----CCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHhh
Q 014492          371 TSG----MDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLMH  421 (423)
Q Consensus       371 ~~~----~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~~  421 (423)
                      ++.    .+..++.+.|.++||.++.+..   ....+++||+++.   .++++++.++|++
T Consensus       369 ~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~  429 (452)
T 2dgk_A          369 KDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKA  429 (452)
T ss_dssp             CTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             cCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence            642    3568999999999997654322   1235699999975   4667777777765

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.96  E-value=2.2e-28  Score=243.02  Aligned_cols=313  Identities=17%  Similarity=0.110  Sum_probs=218.0

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ..++.++||..+.  ++++ .+|++.+++.+ +..  ..+|+.....++++.++++++ .+++|++++|+++++..+++.
T Consensus        53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~  131 (434)
T 2epj_A           53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAPGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRL  131 (434)
T ss_dssp             TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSCCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHH
T ss_pred             CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            4567789998875  4555 57899988876 222  245666567789999999996 578999999999999999986


Q ss_pred             ---hcCCCCeEEEcCCCchhhHHHHH--------------HCCC------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492          166 ---VLDPGDKIVDCPPTFTMYEFDAA--------------VNGA------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (423)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~~~--------------~~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (423)
                         +. +++.|++..|+|+.+...+.              ..|+      .++.+|.     .|++++++.+++  .+++
T Consensus       132 ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~  205 (434)
T 2epj_A          132 ARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYGDRIA  205 (434)
T ss_dssp             HHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHGGGEE
T ss_pred             HHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCCCCEE
Confidence               44 45788888899975433211              1232      3555553     389999999864  3667


Q ss_pred             EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch-hhhhccCCcEEEEccChhhhcccCccccc
Q 014492          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      +|+++..+|+||.+.+    .+++.++|+. |++||+||+|.+|..+... ....+...+   +.||||.++. |+|+||
T Consensus       206 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~d---i~s~sK~l~~-G~~~G~  281 (434)
T 2epj_A          206 GVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGD---IIVLGKIIGG-GFPVGA  281 (434)
T ss_dssp             EEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCS---EEEEEGGGGT-TSSCEE
T ss_pred             EEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCC---eeeecchhcC-Ccceee
Confidence            7776665678999886    6666777776 9999999999977332211 122222233   3488999985 999999


Q ss_pred             cccCHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceE
Q 014492          295 GAFPLSIIEYLWRA-----KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNF  365 (423)
Q Consensus       295 i~~~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~  365 (423)
                      +++++++++.+...     ...|+.+++++.++.++|+..+. ++..++++++++++.+.|+++    +.....++.|+|
T Consensus       282 v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~  360 (434)
T 2epj_A          282 VAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE-EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESM  360 (434)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred             eeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeE
Confidence            99999988877652     23467889999888888864221 345667777777887777654    543334567889


Q ss_pred             EEEEeCCC-------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          366 ILCEVTSG-------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       366 ~~~~~~~~-------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      +|+++++.             .+..++.+.|.++||.+.++..    ..+|+++. +.++++++.++|+
T Consensus       361 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~  425 (434)
T 2epj_A          361 MQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL----EAVFTGLPHQGEALEIAVEGLR  425 (434)
T ss_dssp             EEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCSHHHHHHHHHHHH
T ss_pred             EEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC----CcEEEeccCCHHHHHHHHHHHH
Confidence            99999741             1356788999999999998752    35677654 3444455544444

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.96  E-value=2.9e-27  Score=231.77  Aligned_cols=278  Identities=16%  Similarity=0.129  Sum_probs=212.8

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~  200 (423)
                      +|+++...++++.+++++|.+  ++++++|+++++..++..++++||+|+++.|+|+.+...+    +..|.+++.++.+
T Consensus        62 r~~~~~~~~l~~~la~~~g~~--~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  139 (392)
T 3qhx_A           62 RTGNPTRTALEAALAAVEDAA--FGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA  139 (392)
T ss_dssp             TTCCHHHHHHHHHHHHHTTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred             CCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC
Confidence            456667889999999999964  6888889999999999999999999999999998766555    5679999999853


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|..+... ...    ..+.++++.
T Consensus       140 -----d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~-~~~----~~~~di~~~  208 (392)
T 3qhx_A          140 -----DLDAVRAAIR-PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQ-QPL----SLGADVVLH  208 (392)
T ss_dssp             -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTC-CGG----GGTCSEEEE
T ss_pred             -----CHHHHHHhhC-CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccC-ChH----HhCCcEEEE
Confidence                 8999999997 689999999999999999999999999998 9999999999855332 111    224458999


Q ss_pred             cChhhhcccC-ccccccccC-HHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |+||.+|.+| +|.||++.+ +++.+.+.....  .+..++..+.++...++.   +....++..++.+++.+.|++.+.
T Consensus       209 S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~~~~~~~~~~~~l~~~L~~~~~  285 (392)
T 3qhx_A          209 STTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT---LVLRMQRHSENAAAVAEFLAEHPA  285 (392)
T ss_dssp             ETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             cCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999777 799999997 678877766543  356778888777777755   445566677788888888887764


Q ss_pred             Ce-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------C--------------
Q 014492          356 LN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------K--------------  396 (423)
Q Consensus       356 ~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~------~--------------  396 (423)
                      +. + +|                +.|.++++.++++ ...+.+.+.|...|+.+..|+.      +              
T Consensus       286 v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g  365 (392)
T 3qhx_A          286 ISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLE  365 (392)
T ss_dssp             EEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCC
T ss_pred             cceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcC
Confidence            42 2 22                1267889999742 3456677777666666654432      0              


Q ss_pred             CCCCeEEEEecChhhHHHHHHHH
Q 014492          397 ELKGYVRVSVGKPEHTDALMECL  419 (423)
Q Consensus       397 ~~~~~iRis~~~~~~~~~l~~al  419 (423)
                      ..++.||||++.++. +++.+.+
T Consensus       366 ~~~~~iRlSvg~e~~-~~~i~~l  387 (392)
T 3qhx_A          366 VPDDLVRLSVGIEDV-ADLLDDL  387 (392)
T ss_dssp             CCTTEEEEECCSSCH-HHHHHHH
T ss_pred             CCCCeEEEEeccCCH-HHHHHHH
Confidence            236789999997653 4444433

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.96  E-value=5.2e-28  Score=239.86  Aligned_cols=279  Identities=18%  Similarity=0.216  Sum_probs=207.2

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH----HHHCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~v~~~~  201 (423)
                      |+++...++|+++++++|.+ +.|++++|+ +++..++.+++++||+|+++.|.|..+...    ++..|++++.++.+ 
T Consensus       111 ~~~~~~~~l~~~lA~l~g~~-~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-  187 (445)
T 1qgn_A          111 YGNPTTVVLEEKISALEGAE-STLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-  187 (445)
T ss_dssp             GCCHHHHHHHHHHHHHHTCS-EEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-
T ss_pred             CCChHHHHHHHHHHHHhCCC-cEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-
Confidence            35556779999999999975 667777666 999999999999999999999999876553    45679999999853 


Q ss_pred             CCCCCHHHHHHHhhcCCc-eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          202 DFSLNVELIADAVEREKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~-~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          |+++++++++ +++ ++|++++|+||||.+.+.+++.++|+. |+++|+|++|..+... ...    ..+.++++.
T Consensus       188 ----d~~~l~~ai~-~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-~~~----~~g~Div~~  257 (445)
T 1qgn_A          188 ----DVGALELALN-QKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-KAL----ALGADLVLH  257 (445)
T ss_dssp             ----CHHHHHHHHH-HSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CTT----TTTCSEEEE
T ss_pred             ----CHHHHHHHhc-cCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----ccCCEEEEE
Confidence                8999999997 467 999999999999999999999999987 9999999999855422 111    234558999


Q ss_pred             cChhhhcccC-ccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 014492          280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL  356 (423)
Q Consensus       280 S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  356 (423)
                      |+||.+|..| .++||+++++++++.+......  ...++.....+...++   .+....++..++++++.+.|++.+.+
T Consensus       258 S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~---~l~~r~~~~~~~a~~l~~~L~~~p~v  334 (445)
T 1qgn_A          258 SATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK---TLHLRVQQQNSTALRMAEILEAHPKV  334 (445)
T ss_dssp             CTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG---GHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred             CCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH---HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            9999988555 4799999999998888765433  2346665555555553   34555566677788999999888755


Q ss_pred             -ee-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCC---------------------
Q 014492          357 -NP-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNK---------------------  396 (423)
Q Consensus       357 -~~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~---------------------  396 (423)
                       .+ +|                +.++++++.++++ .+...+.+.|...++.++.|+..                     
T Consensus       335 ~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~  414 (445)
T 1qgn_A          335 RHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAK  414 (445)
T ss_dssp             EEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHT
T ss_pred             eEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHh
Confidence             22 33                2577889999742 12344555554345555544321                     


Q ss_pred             --CCCCeEEEEecChhhHHHHHHHHhh
Q 014492          397 --ELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       397 --~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                        ..++.||||++.+ +.++|.+.|++
T Consensus       415 ~g~~~~~iRlSvG~E-did~li~~L~~  440 (445)
T 1qgn_A          415 YGIMDNLVRFSFGVE-DFDDLKADILQ  440 (445)
T ss_dssp             TTCCSSEEEEECCSS-CHHHHHHHHHH
T ss_pred             cCCCCCeEEEEeccC-CHHHHHHHHHH
Confidence              1247999999965 57888888765

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.96  E-value=8.9e-27  Score=230.26  Aligned_cols=304  Identities=15%  Similarity=0.131  Sum_probs=221.7

Q ss_pred             CCCCCC-CHHHHHHHhcC-C-CC-CCCCC-cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeE
Q 014492          104 ENPYGP-PPEVREALGQL-K-FP-YIYPD-PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI  173 (423)
Q Consensus       104 ~~~~~~-~~~v~~al~~~-~-~~-~~Y~~-~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~V  173 (423)
                      .+.+++ ++++.+++.+. . .. ..|+. .|    ..++++.+++++|++  ++++++|+++++..++.++ +++||+|
T Consensus         8 ~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd~V   85 (418)
T 2c81_A            8 WPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGDEV   85 (418)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             CCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence            344443 68888887652 1 11 22532 23    678999999999976  4566667789999999998 8999999


Q ss_pred             EEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (423)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li  251 (423)
                      +++.|+|..+...++..|++++.++.+. ++.+|++++++.++ .++++|+++   ||||...+.+++.++|+. |++||
T Consensus        86 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li  161 (418)
T 2c81_A           86 IVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAIT-DKTKAIIPV---HLFGSMANMDEINEIAQEHNLFVI  161 (418)
T ss_dssp             EEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCC-TTEEEECCB---CCTTCCCCHHHHHHHHHHTTCEEE
T ss_pred             EECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhC-CCCeEEEEe---CCcCCcccHHHHHHHHHHCCCEEE
Confidence            9999999999999999999999999764 78899999999997 588988864   589999999999999987 99999


Q ss_pred             EccCCcccc-CCCchhhhhccCCcEEEEccC--hhhhcccCccccccccC-HHHHHHHHHhcCC--------------CC
Q 014492          252 LDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------YN  313 (423)
Q Consensus       252 ~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------~~  313 (423)
                      +||+|..+. +.+......   . .+.+.||  ||.++. | |+||++++ +++++++......              +.
T Consensus       162 ~D~a~~~~~~~~~~~~~~~---~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (418)
T 2c81_A          162 EDCAQSHGSVWNNQRAGTI---G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDM  235 (418)
T ss_dssp             EECTTCTTCEETTEETTSS---S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCB
T ss_pred             EECcccccCccCCEecccc---c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchh
Confidence            999999875 333222211   1 2667777  999986 8 99999994 7888877654322              11


Q ss_pred             --------------CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCc--e---EEE-EEeCC
Q 014492          314 --------------VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYS--N---FIL-CEVTS  372 (423)
Q Consensus       314 --------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~--~---~~~-~~~~~  372 (423)
                                    ++.+........+   +++++..++.+++++++.+.|++++++.+. +..+  .   +++ +.+++
T Consensus       236 ~~~~~~~~~g~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  312 (418)
T 2c81_A          236 QLVKKGDIQGSNYCLSEFQSAILLDQL---QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDP  312 (418)
T ss_dssp             SEEECCSSCCCBCCCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECG
T ss_pred             hccccccccCcCCCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcc
Confidence                          1112111111222   346677777888899999999988666653 3332  2   233 77774


Q ss_pred             ----CCCHHHHHHHHHhC-CcE---EEeCCCC-----------------------------CC-------CCeEEEEe--
Q 014492          373 ----GMDAKKLKDDLAKM-GVM---IRHYNNK-----------------------------EL-------KGYVRVSV--  406 (423)
Q Consensus       373 ----~~~~~~l~~~L~~~-gI~---v~~~~~~-----------------------------~~-------~~~iRis~--  406 (423)
                          +.+.+++.+.|.++ ||.   ++++..+                             ..       .+.|||++  
T Consensus       313 ~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~  392 (418)
T 2c81_A          313 VKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAI  392 (418)
T ss_dssp             GGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGG
T ss_pred             ccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCc
Confidence                67889999999987 999   8876421                             00       15899998  


Q ss_pred             --cChhhHHHHHHHHhhh
Q 014492          407 --GKPEHTDALMECLMHL  422 (423)
Q Consensus       407 --~~~~~~~~l~~al~~l  422 (423)
                        ++.++++++.++|+++
T Consensus       393 ~~gt~edi~~~~~~l~~~  410 (418)
T 2c81_A          393 LLAEPSHLSLLVDAVAEL  410 (418)
T ss_dssp             GGSCHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHH
Confidence              4777888888887653

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.96  E-value=5.8e-28  Score=236.56  Aligned_cols=310  Identities=14%  Similarity=0.114  Sum_probs=222.3

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCC
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGD  171 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd  171 (423)
                      .+++.+..+.+.++  +++.+++.+......|  ++++..++|++++++++.+  ++++++|+++++..++..+ +++||
T Consensus        22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~~gt~al~~~l~~~~~~~gd   97 (391)
T 3dr4_A           22 SDLPRISVAAPRLD--GNERDYVLECMDTTWISSVGRFIVEFEKAFADYCGVK--HAIACNNGTTALHLALVAMGIGPGD   97 (391)
T ss_dssp             ------CCCCCCCC--SSHHHHHHHHHHHTCCSSCSHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHTCCTTC
T ss_pred             CCCceeccCCCCCC--HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence            45677887777664  5666776653211234  3567899999999999975  7888888899999999999 89999


Q ss_pred             eEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCE
Q 014492          172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL  249 (423)
Q Consensus       172 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~  249 (423)
                      +|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ +++++|+   |+||||.+.+.+++.++|+. |++
T Consensus        98 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~  173 (391)
T 3dr4_A           98 EVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALIT-PRTKAIM---PVHLYGQICDMDPILEVARRHNLL  173 (391)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCE
T ss_pred             EEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcC-CCceEEE---EECCCCChhhHHHHHHHHHHcCCE
Confidence            99999999999999999999999999976 568899999999997 6888887   67899999999999999987 999


Q ss_pred             EEEccCCcccc-CCCchhhhhccCCcEEEEccCh--hhhcccCccccccccC-HHHHHHHHHhcCC--------------
Q 014492          250 VVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------  311 (423)
Q Consensus       250 li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------  311 (423)
                      +|+|++|..+. +.+......  .+  +.+.|||  |.+  +|.+.|+++.+ +++.+.+......              
T Consensus       174 li~D~a~~~g~~~~~~~~~~~--~d--i~~~S~s~~K~l--~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g  247 (391)
T 3dr4_A          174 VIEDAAEAVGATYRGKKSGSL--GD--CATFSFFGNAII--TTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVG  247 (391)
T ss_dssp             EEEECTTCTTCEETTEETTSS--SS--EEEEECBTTSSS--CCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCC
T ss_pred             EEEECcccccceECCeeeccc--CC--EEEEECCCCCcC--CcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccc
Confidence            99999998643 222211111  12  6777766  655  55678888775 5576666554311              


Q ss_pred             --CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC-------Cc-eEEEEEeCC--CCCHHHH
Q 014492          312 --YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS-------YS-NFILCEVTS--GMDAKKL  379 (423)
Q Consensus       312 --~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~-------~~-~~~~~~~~~--~~~~~~l  379 (423)
                        +.++.+...+....+   +.+++..++.+++++++.+.|++++ +.+.+.       .. ..+++.+++  +.+.+++
T Consensus       248 ~~~~~~~l~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l  323 (391)
T 3dr4_A          248 FNYRMTNIQAAIGLAQL---ERVDEHLAARERVVGWYEQKLARLG-NRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQV  323 (391)
T ss_dssp             CBCBCCHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHGGGT-TSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHH
T ss_pred             cccCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhhcCC-ccccCcCCCCCCcceeEEEEEEECCccchhHHHH
Confidence              233444443333333   3456677788888899999998873 443222       12 235777775  6789999


Q ss_pred             HHHHHhCCcEEEeCCCC-----C---------------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          380 KDDLAKMGVMIRHYNNK-----E---------------LKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~-----~---------------~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+.|.++||.++++..+     .               ....+||++.   +.++++++.++|+++
T Consensus       324 ~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~  389 (391)
T 3dr4_A          324 IKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV  389 (391)
T ss_dssp             HHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred             HHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999977521     0               1357999876   566677777777653

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.96  E-value=9.8e-28  Score=241.36  Aligned_cols=317  Identities=14%  Similarity=0.090  Sum_probs=224.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCC--CCCC-------cchH----HHHHHHHHHhCCCCCc----EEEeCCHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPY--IYPD-------PESR----RLRAALAKDSGLESDH----ILVGCGAD  156 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~--~Y~~-------~g~~----~lr~~ia~~~g~~~~~----i~~t~G~~  156 (423)
                      .+.|.|..++++  +++.+++++.+. ...+  +||.       ....    .+++.+++++|+++++    |++++|+ 
T Consensus        44 ~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-  120 (483)
T 1rv3_A           44 RVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-  120 (483)
T ss_dssp             HSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-
T ss_pred             hcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-
Confidence            356999888874  578999999873 2212  3432       1223    4458888899987653    8899988 


Q ss_pred             HHHHHHHHHhcCCCCeEEEcCCCchhhHHH--------HHHCC--CeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEc
Q 014492          157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD--------AAVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLT  225 (423)
Q Consensus       157 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~  225 (423)
                      +++..++.++++|||+|++++|+|..+...        ++..|  .+++.++.+ +++.+|+++|++.+.+.++|+|++ 
T Consensus       121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi~-  199 (483)
T 1rv3_A          121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIA-  199 (483)
T ss_dssp             HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-
T ss_pred             HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEEE-
Confidence            788888888999999999999998755421        22234  566666545 567899999999997568999999 


Q ss_pred             CCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH---
Q 014492          226 SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS---  300 (423)
Q Consensus       226 ~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~---  300 (423)
                      +++||+ .+++.+++.+||+. |++||+|++|... ...+.....+.  ...+++.|+||.+  .|+|.||++++++   
T Consensus       200 ~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~~div~~s~~K~l--~GprgG~i~~~~~~~~  274 (483)
T 1rv3_A          200 GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--HCHVVTTTTHKTL--RGCRAGMIFYRRGVRS  274 (483)
T ss_dssp             CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--TCSEEEEESSGGG--CCCSCEEEEEECSBCC
T ss_pred             eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--CCcEEEecCcccC--CCCCceEEEEcchhhh
Confidence            999998 99999999999987 9999999998732 21111111111  2348889999976  6889999999764   


Q ss_pred             ------------HHHHHHHhcCC---CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--
Q 014492          301 ------------IIEYLWRAKQP---YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS--  361 (423)
Q Consensus       301 ------------~~~~l~~~~~~---~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--  361 (423)
                                  +.+.+.....+   .+++.....+...+++.  ..++++.+++++++++++.+.|++++ +.+.++  
T Consensus       275 ~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~  353 (483)
T 1rv3_A          275 VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELG-YKIVTGGS  353 (483)
T ss_dssp             -------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSC
T ss_pred             hccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcC-CEeccCCC
Confidence                        44444433222   33445545444445543  24678889999999999999999885 554333  


Q ss_pred             CceEEEEEeCC-CCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEecC-------hhhHHHHHHHHhh
Q 014492          362 YSNFILCEVTS-GMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVGK-------PEHTDALMECLMH  421 (423)
Q Consensus       362 ~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~----~~~~-~~~~~~iRis~~~-------~~~~~~l~~al~~  421 (423)
                      ...++|++++. +.+..++.+.|.++||.++    ++.. ...++++||+++.       .++++++.++|++
T Consensus       354 ~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~  426 (483)
T 1rv3_A          354 DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHR  426 (483)
T ss_dssp             SSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHH
Confidence            23578888853 5688889888889999998    6653 2246799999874       4566666666654

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.96  E-value=6.8e-28  Score=239.12  Aligned_cols=320  Identities=15%  Similarity=0.098  Sum_probs=212.2

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +..+++++|+..+.  +.++ .+|++.+++.+ +...  .+|+++...+++++++++++ .+++|++++|++++++.+++
T Consensus        49 d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~  127 (429)
T 4e77_A           49 DVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPTEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIR  127 (429)
T ss_dssp             ETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCCHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHH
Confidence            34577899998775  4565 57999999876 3322  44677777899999999997 68899999999999999998


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHHHH-CC--CeEEEecCCCCC------------CCCHHHHHHHhhc--CCceEEEEc
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDAAV-NG--AAVVKVPRKSDF------------SLNVELIADAVER--EKPKCIFLT  225 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g--~~~~~v~~~~~~------------~~d~~~l~~~i~~--~~~~~i~l~  225 (423)
                      ...  ..++.|++..++|+.+...+.. .|  ......|...+.            ..|++++++.+++  .++++|+ +
T Consensus       128 ~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi-~  206 (429)
T 4e77_A          128 LARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACII-V  206 (429)
T ss_dssp             HHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEE-E
T ss_pred             HHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEE-E
Confidence            543  3467899999999765542211 11  111111111110            1289999999874  3455555 5


Q ss_pred             CCC-CCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492          226 SPN-NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       226 ~p~-NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      +|+ +++|.+.+    .+++.++|+. |++||+||+|.+| ..+.  .....+..++   +.|+||.++ +|+|+||+++
T Consensus       207 ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pd---i~t~sK~~~-~G~~~G~~~~  281 (429)
T 4e77_A          207 EPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPD---LTCLGKIIG-GGMPVGAFGG  281 (429)
T ss_dssp             CSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCS---EEEEEGGGG-TTSCCEEEEE
T ss_pred             CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCC---eeeeccccc-CCCCeEEEEE
Confidence            555 44566666    6888888887 9999999999988 3222  1222222233   348899999 8999999999


Q ss_pred             CHHHHHHHHHh-----cCCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEE
Q 014492          298 PLSIIEYLWRA-----KQPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE  369 (423)
Q Consensus       298 ~~~~~~~l~~~-----~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~  369 (423)
                      ++++++.+...     ..+|+.+++++.++.++|+   ++++.++.++.....++.|.+.+.+.+.....++.|+|++++
T Consensus       282 ~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~  361 (429)
T 4e77_A          282 RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLF  361 (429)
T ss_dssp             CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEE
T ss_pred             CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEE
Confidence            99998887652     3347889999998888886   344445555544555555555555556544456678999999


Q ss_pred             eCCCC--------------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492          370 VTSGM--------------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  421 (423)
Q Consensus       370 ~~~~~--------------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  421 (423)
                      +++..              ...++++.|.++||.+++++.    ..+|+++. +.++++++.++|++
T Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~~  424 (429)
T 4e77_A          362 FTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF----EAGFMSLAHSNEDIQKTVNAARR  424 (429)
T ss_dssp             CCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCHHHHHHHHHHHHH
T ss_pred             EccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCC----CCEEEeccCCHHHHHHHHHHHHH
Confidence            87431              127888999999999998762    45677654 44455555555543

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.96  E-value=3e-26  Score=226.10  Aligned_cols=295  Identities=20%  Similarity=0.235  Sum_probs=216.1

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCC---CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          105 NPYGPPPEVREALGQLKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Y~---~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      ..++.++.+.+++.. ...+.|+   ++..+++++.+++++|.+  ++++++|+++++..++.+++++||+|+++.|+|.
T Consensus        30 ~~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~l~~~la~~~g~~--~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~  106 (412)
T 2cb1_A           30 YGFKTLEEGQERFAT-GEGYVYARQKDPTAKALEERLKALEGAL--EAVVLASGQAATFAALLALLRPGDEVVAAKGLFG  106 (412)
T ss_dssp             CCCSSHHHHHHHHHH-CCSCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCH
T ss_pred             eecCChHHHHHHhcc-ccCcCcCCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCch
Confidence            345556666666652 2234553   345789999999999964  8999999999999999999999999999999998


Q ss_pred             hhHHH----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492          182 MYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (423)
Q Consensus       182 ~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay  256 (423)
                      .....    ++..|++++.++.      |++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|
T Consensus       107 ~~~~~~~~~~~~~g~~~~~~~~------~~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~  179 (412)
T 2cb1_A          107 QTIGLFGQVLSLMGVTVRYVDP------EPEAVREALS-AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF  179 (412)
T ss_dssp             HHHHHHHHTTTTTTCEEEEECS------SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred             hHHHHHHHHHHHcCCEEEEECC------CHHHHHHHhc-cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence            65544    3447999999985      3899999997 689999999999999999999999999998 9999999999


Q ss_pred             ccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCH----------------------------HHHHHHHHh
Q 014492          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL----------------------------SIIEYLWRA  308 (423)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~----------------------------~~~~~l~~~  308 (423)
                      ..+.......    ..+.++++.|+||.++.+|.|+|+++..+                            ++.+.++..
T Consensus       180 ~~~~~~~~~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~  255 (412)
T 2cb1_A          180 GAAGALCRPL----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTL  255 (412)
T ss_dssp             GTTTTSCCGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHH
T ss_pred             ccccccCCcc----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHH
Confidence            8762211111    23567999999999988999999887633                            445555543


Q ss_pred             c-CC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe-e-cC----------------CCceEEE
Q 014492          309 K-QP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN-P-YP----------------SYSNFIL  367 (423)
Q Consensus       309 ~-~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~p----------------~~~~~~~  367 (423)
                      . ..  +..++.....+...++.   +....++..++.+++.+.|.+.+.+. + .|                ..+.++.
T Consensus       256 ~~~~~g~~~~~~~a~~~~~~l~~---l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~  332 (412)
T 2cb1_A          256 GLSLCGMALSPFNAYLLFQGLET---VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILT  332 (412)
T ss_dssp             HTTTTCCCCCHHHHHHHHHHGGG---HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEE
T ss_pred             HHHhcCCCCChHHhHHHHcCCch---HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEE
Confidence            3 22  23455555555555532   34555666788899999998876655 3 13                2466788


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCC---------CC------C-----------CCCeEEEEecChh---hHHHHHHH
Q 014492          368 CEVTSGMDAKKLKDDLAKMGVMIRHYN---------NK------E-----------LKGYVRVSVGKPE---HTDALMEC  418 (423)
Q Consensus       368 ~~~~~~~~~~~l~~~L~~~gI~v~~~~---------~~------~-----------~~~~iRis~~~~~---~~~~l~~a  418 (423)
                      +.+  + +.+.+.+.|.+.||.+ .++         .+      .           .++.||+|++..+   +.++|.++
T Consensus       333 ~~~--~-~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~a  408 (412)
T 2cb1_A          333 LDL--G-DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEA  408 (412)
T ss_dssp             EEC--S-SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred             EEe--C-CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHH
Confidence            888  3 6778888888899998 653         11      0           1679999998544   44445555


Q ss_pred             Hh
Q 014492          419 LM  420 (423)
Q Consensus       419 l~  420 (423)
                      |+
T Consensus       409 l~  410 (412)
T 2cb1_A          409 LE  410 (412)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.96  E-value=1.3e-27  Score=240.02  Aligned_cols=320  Identities=15%  Similarity=0.130  Sum_probs=221.5

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~--~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +..++.+||+..|  .+.++ .+|+|.+|+.+ +   .+.+  .|+++...+|.+.++++++...++|++++|+++++..
T Consensus        50 d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~  129 (476)
T 3i5t_A           50 TEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDS  129 (476)
T ss_dssp             ETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHH
T ss_pred             ECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHH
Confidence            3456789999877  56676 47899988875 2   2211  3444456788888888887777899999999999999


Q ss_pred             HHHHhcC--------CCCeEEEcCCCchhhHHHHHHCCCe-------------EEEecCCCC---CCCC--------HHH
Q 014492          162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSD---FSLN--------VEL  209 (423)
Q Consensus       162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~---~~~d--------~~~  209 (423)
                      +++.+..        .++.|++..|+|+.+...+...+..             +..++.+..   +..|        +++
T Consensus       130 Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  209 (476)
T 3i5t_A          130 ALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQE  209 (476)
T ss_dssp             HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHH
Confidence            9997753        3578999999998777665543322             223332111   1222        788


Q ss_pred             HHHHhhc---CCceEEEEcCCCCCcCc-CCC---HHHHHHHHcC-CCEEEEccCCccccCCCch--hh-hhccCCcEEEE
Q 014492          210 IADAVER---EKPKCIFLTSPNNPDGS-IIN---DEDLLKILEM-PILVVLDEAYTEFSGLESR--ME-WVKKHDNLIVL  278 (423)
Q Consensus       210 l~~~i~~---~~~~~i~l~~p~NPtG~-~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~-~~~~~~~~i~i  278 (423)
                      |++.+.+   .++++|+++.++|++|. +++   ++++.++|+. |++||+||+|.+|...+..  .. ..+..++++  
T Consensus       210 le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~--  287 (476)
T 3i5t_A          210 FEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDII--  287 (476)
T ss_dssp             HHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE--
T ss_pred             HHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchh--
Confidence            8888863   46788888888999997 555   4555556665 9999999999988654432  22 222334433  


Q ss_pred             ccChhhhcccC-ccccccccCHHHHHHHHHh-------c--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Q 014492          279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------K--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFK  348 (423)
Q Consensus       279 ~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~-------~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~  348 (423)
                       ++||.++ .| +|+|++++++++++.+...       .  ..|+.+++++.++.++|+..+- +...++++++.+++.+
T Consensus       288 -t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~-~~~~~~~~~~~~~l~~  364 (476)
T 3i5t_A          288 -TFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER-EGIVDQAREMADYFAA  364 (476)
T ss_dssp             -EECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHH
T ss_pred             -hhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHH
Confidence             5789998 58 9999999999999988753       1  3578899999999999864211 3455566666666666


Q ss_pred             HHccC---CCCeecCCCceEEEEEeCCCC-----------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chhh
Q 014492          349 LLKDV---PFLNPYPSYSNFILCEVTSGM-----------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEH  411 (423)
Q Consensus       349 ~L~~~---~~~~~~p~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~  411 (423)
                      .|+++   +.+...++.|.|+++++.+..           ....+.+.|.++||.+++.+     +++||++.   +.++
T Consensus       365 ~L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-----~~iRi~p~l~~t~e~  439 (476)
T 3i5t_A          365 ALASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-----DLCVISPPLIISRAQ  439 (476)
T ss_dssp             HHHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHHH
T ss_pred             HHHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-----CEEEEECCCCCCHHH
Confidence            66543   444445677888888886321           15678888999999999853     79999954   4444


Q ss_pred             HHHHHHHHh
Q 014492          412 TDALMECLM  420 (423)
Q Consensus       412 ~~~l~~al~  420 (423)
                      ++++.++|+
T Consensus       440 i~~~l~~l~  448 (476)
T 3i5t_A          440 IDEMVAIMR  448 (476)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            444444443

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.96  E-value=8.3e-27  Score=229.07  Aligned_cols=280  Identities=16%  Similarity=0.149  Sum_probs=207.2

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~  200 (423)
                      +|+++...++++.+++++|.+ +.++++ ++++++..++.+++++||+|+++.|+|+.+...+    +..|++++.++. 
T Consensus        61 r~~~~~~~~l~~~la~~~g~~-~~i~~~-sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-  137 (398)
T 1gc0_A           61 RISNPTLNLLEARMASLEGGE-AGLALA-SGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-  137 (398)
T ss_dssp             --CCHHHHHHHHHHHHHHTCS-EEEEES-SHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-
T ss_pred             CCCChHHHHHHHHHHHHhCCC-cEEEEC-CHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-
Confidence            346667889999999999975 455555 4579999999999999999999999998877665    567999999985 


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                          .|++++++.++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|..+.... ..    ..+.++++.
T Consensus       138 ----~d~~~l~~~i~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~-~~----~~~~d~~~~  207 (398)
T 1gc0_A          138 ----ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR-PL----ELGADLVVH  207 (398)
T ss_dssp             ----TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC-GG----GGTCSEEEE
T ss_pred             ----CCHHHHHHhcC-CCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCceEEEE
Confidence                27999999997 689999999999999999999999999998 99999999998655322 11    234568999


Q ss_pred             cChhhhcccCccc-cccccCHHHHH-HHHHhc---CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          280 TFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAK---QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       280 S~SK~~g~~G~R~-G~i~~~~~~~~-~l~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      |+||.++.+|.|+ ||++++++.++ .+....   ..++.+++.+.++...++.   +....++..++.+.+.+.|++++
T Consensus       208 S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~~~~  284 (398)
T 1gc0_A          208 SATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT---LNLRMDRHCANAQVLAEFLARQP  284 (398)
T ss_dssp             ETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             CCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999999999998 99999988765 444332   2356788888887777754   44556666777777778777654


Q ss_pred             CCe--------------ec----CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEe---CCC------------------
Q 014492          355 FLN--------------PY----PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH---YNN------------------  395 (423)
Q Consensus       355 ~~~--------------~~----p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~---~~~------------------  395 (423)
                      .+.              +.    ++.++++.+++++  +.+...+.+.+.|+.++.   |+.                  
T Consensus       285 ~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~  362 (398)
T 1gc0_A          285 QVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPE  362 (398)
T ss_dssp             TEEEEEEC----------------CCTTEEEEEETT--HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHH
T ss_pred             CeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHH
Confidence            321              11    1357788888862  234556666788888865   211                  


Q ss_pred             ----C-CCCCeEEEEecC---hhhHHHHHHHHhhh
Q 014492          396 ----K-ELKGYVRVSVGK---PEHTDALMECLMHL  422 (423)
Q Consensus       396 ----~-~~~~~iRis~~~---~~~~~~l~~al~~l  422 (423)
                          . ..+++||||++.   .++.++|.++|+++
T Consensus       363 ~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          363 ERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS  397 (398)
T ss_dssp             HHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence                0 014899999986   34445555555543

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.95  E-value=4.8e-27  Score=230.44  Aligned_cols=298  Identities=14%  Similarity=0.083  Sum_probs=215.8

Q ss_pred             HHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492          111 PEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (423)
Q Consensus       111 ~~v~~al~~~~~~~~Y~~~g--~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (423)
                      +++.+++.+......|+..|  ..++|+++++++|.  ++|++++|+++++..++.++ +++||+|+++.|+|..+...+
T Consensus        12 ~~v~~a~~~~~~~~~~~~~g~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~   89 (394)
T 1o69_A           12 GNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYSKS--ENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPI   89 (394)
T ss_dssp             CCHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHH
T ss_pred             HHHHHHHHHHHHcCCccCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHH
Confidence            45566665521112234345  78999999999996  68999999999999999999 899999999999999999999


Q ss_pred             HHCCCeEEEecCCCCCCCCHHHHHHHhhcC--CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc-cccCCC
Q 014492          188 AVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLE  263 (423)
Q Consensus       188 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~-~~~~~~  263 (423)
                      +..|++++.++.++++.+|++++++.+++.  ++++|++++   |||...+.+++.++|+. |+++|+||+|. ++.+.+
T Consensus        90 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~  166 (394)
T 1o69_A           90 CYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKN  166 (394)
T ss_dssp             HHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT
T ss_pred             HHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCC
Confidence            999999999998777889999999999743  789999885   89999999999999987 99999999998 343322


Q ss_pred             chhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCCC----------------CcHHHHHHHHHHh
Q 014492          264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPYN----------------VSVAAEVAACAAL  326 (423)
Q Consensus       264 ~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~~----------------~~~~~~~a~~~~l  326 (423)
                      ......  .+  +.+.|+||..+++|.|+||++++ +++++.+......+.                .+.....++...+
T Consensus       167 ~~~~~~--~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l  242 (394)
T 1o69_A          167 KALGTF--GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQM  242 (394)
T ss_dssp             EETTSS--SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHH
T ss_pred             cccccc--cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHH
Confidence            211111  12  44555643334567899999995 888888876543220                2333333333333


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC----ce--EEEEEeCCC---------------------CCHHHH
Q 014492          327 QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY----SN--FILCEVTSG---------------------MDAKKL  379 (423)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~----~~--~~~~~~~~~---------------------~~~~~l  379 (423)
                         +++++..++++++++++.+.|+++  +.+.+..    ++  ++++.++++                     .+.+++
T Consensus       243 ---~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  317 (394)
T 1o69_A          243 ---EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKL  317 (394)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHH
Confidence               456778888999999999999887  3433321    34  367777632                     367889


Q ss_pred             HHHHHhCCcEEEeCCCC-----CCC---------------CeEEEEe---cChhhHHHHHHHHhhh
Q 014492          380 KDDLAKMGVMIRHYNNK-----ELK---------------GYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       380 ~~~L~~~gI~v~~~~~~-----~~~---------------~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      .+.|.++||.++++..+     ...               ..+|+..   .+.++++++.++|+++
T Consensus       318 ~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~  383 (394)
T 1o69_A          318 IEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKS  383 (394)
T ss_dssp             HHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999987421     111               2334433   4677788888888754

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.95  E-value=2.4e-27  Score=230.48  Aligned_cols=306  Identities=15%  Similarity=0.139  Sum_probs=223.8

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKI  173 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~V  173 (423)
                      ++++++.+.+++.+   +.+++.+. .....|++++..++|++++++++.+  ++++++|+++++..++..+ +++||+|
T Consensus         7 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~~gt~a~~~~~~~~~~~~gd~v   81 (374)
T 3uwc_A            7 PYSYLERQFADIEP---YLNDLREFIKTADFTLGAELEKFEKRFAALHNAP--HAIGVGTGTDALAMSFKMLNIGAGDEV   81 (374)
T ss_dssp             CSCCHHHHTSSCHH---HHHHHHHHHHHTCCSSCHHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             eeeccccCCCCchH---HHHHHHHHHHcCCcccChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCCCEE
Confidence            45777777776643   77777663 2223346678899999999999965  7888999999999999999 9999999


Q ss_pred             EEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEE
Q 014492          174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL  252 (423)
Q Consensus       174 l~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~  252 (423)
                      +++.|+|..+...++..|++++.++.++++.+|++++++.+. +++++|+   |+||||.+.+.+++.++|+. |+++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~  157 (374)
T 3uwc_A           82 ITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAIT-DKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVE  157 (374)
T ss_dssp             EEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred             EECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCC-CCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence            999999999999999999999999987778899999999997 5788877   89999999999999999987 999999


Q ss_pred             ccCCccccC-CCchhhhhccCCcEEEEccCh--hhhcccCccccccccC-HHHHHHHHHhcCC--------------CCC
Q 014492          253 DEAYTEFSG-LESRMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------YNV  314 (423)
Q Consensus       253 Deay~~~~~-~~~~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------~~~  314 (423)
                      ||+|..+.. ........    ..+++.|+|  |.++.+|. .|+++++ +++.+.+......              +..
T Consensus       158 D~~~~~g~~~~~~~~~~~----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (374)
T 3uwc_A          158 DACQTILGRINDKFVGSW----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRM  232 (374)
T ss_dssp             ECTTCTTCEETTEETTSS----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBC
T ss_pred             eCCCccCceeCCeecccc----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCC
Confidence            999986532 22211111    146777866  98875465 7888875 5677776654321              223


Q ss_pred             cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC-Ceec--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCC
Q 014492          315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF-LNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~--p~~~--~~--~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      +.+...+....+   +.+++..++.+++.+++.+.|++++. +.+.  +..+  .+  +.+..   .+..++.+.|.++|
T Consensus       233 ~~~~aa~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~g  306 (374)
T 3uwc_A          233 DTIQAVIANRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV---KYRDQLFQYLKDNG  306 (374)
T ss_dssp             CHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE---TTHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc---CCHHHHHHHHHHCC
Confidence            444444433333   34566777788888999999988875 4432  2222  22  22333   36889999999999


Q ss_pred             cEEEeCCCC----------------CC-------CCeEEEEec---ChhhHHHHHHHHhh
Q 014492          388 VMIRHYNNK----------------EL-------KGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       388 I~v~~~~~~----------------~~-------~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      |.++++...                ..       .+.+||++.   +.++++++.++|++
T Consensus       307 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~  366 (374)
T 3uwc_A          307 IEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVRE  366 (374)
T ss_dssp             BCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred             CccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHH
Confidence            999876510                00       168999875   55666666666654

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.95  E-value=3.7e-27  Score=238.28  Aligned_cols=282  Identities=12%  Similarity=0.086  Sum_probs=215.2

Q ss_pred             HHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcC-----CC---CeEEEcCCCchhhHHHHHHCCCeEEEecCCC-
Q 014492          133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD-----PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-  201 (423)
Q Consensus       133 ~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~-----~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-  201 (423)
                      ++++.+++++|.+  ++++++++|+++++.+++.++++     +|   |.|+++.|+|..+...++..|++++.+|.++ 
T Consensus       111 ~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~  190 (497)
T 3mc6_A          111 EVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT  190 (497)
T ss_dssp             HHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred             HHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcc
Confidence            4566677778887  68999999999999999998865     56   8999999999999999999999999999876 


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-------Cch-hhhhccC
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-------ESR-MEWVKKH  272 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-------~~~-~~~~~~~  272 (423)
                      ++.+|+++|++++. +++++|++++|+||||.+.+.++|.+||+. |+++|+|++|..+...       +.. .......
T Consensus       191 ~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~  269 (497)
T 3mc6_A          191 TYQVDLGKVKKFIN-KNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVP  269 (497)
T ss_dssp             TCSBCTTTTGGGCC-SSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTST
T ss_pred             cCcCCHHHHHHHHh-hCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCC
Confidence            78899999999997 689999999999999999999999999987 9999999999854310       000 0111123


Q ss_pred             CcEEEEccChhhhcccCccccccccCHHHHHHHHHhc-CCCC------------Cc---HHHHHHHHHHhCChHHHHHHH
Q 014492          273 DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-QPYN------------VS---VAAEVAACAALQNPIYLEKVK  336 (423)
Q Consensus       273 ~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~-~~~~------------~~---~~~~~a~~~~l~~~~~~~~~~  336 (423)
                      +..+++.|++|.+ .+|.++|+++++++.+....... ..+.            .+   ..++.++...+.. +.+++..
T Consensus       270 g~d~~~~s~~K~l-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~-~~~~~~~  347 (497)
T 3mc6_A          270 GVTSISCDTHKYG-FAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGE-NGYIESC  347 (497)
T ss_dssp             TCCEEEEETTTTT-CCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             CCcEEEECchhhc-CCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhH-HHHHHHH
Confidence            4468888999954 47888999998776654432111 1111            11   3345555555533 4467888


Q ss_pred             HHHHHHHHHHHHHHcc-CCCCeec-CCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec--ChhhH
Q 014492          337 EALIKERERLFKLLKD-VPFLNPY-PSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG--KPEHT  412 (423)
Q Consensus       337 ~~~~~~~~~l~~~L~~-~~~~~~~-p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~--~~~~~  412 (423)
                      ++..++++++.+.|++ ++++.+. +..++++++..+ +.+..++.+.|.++||.++.+..   +..+|++++  +.+++
T Consensus       348 ~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i  423 (497)
T 3mc6_A          348 QEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSK-TLNIHELSDRLSKKGWHFNALQK---PVALHMAFTRLSAHVV  423 (497)
T ss_dssp             HHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECT-TTTHHHHHHHHHTTTCBCEECCS---SCCEEEECCTTTTCTH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCC-CCCHHHHHHHHHhCCEEEecCCC---CCeEEEEEeCCCHHHH
Confidence            8899999999999998 6766653 566677777765 57889999999999999987653   347899887  66677


Q ss_pred             HHHHHHHhh
Q 014492          413 DALMECLMH  421 (423)
Q Consensus       413 ~~l~~al~~  421 (423)
                      +++.++|++
T Consensus       424 ~~~~~~L~~  432 (497)
T 3mc6_A          424 DEICDILRT  432 (497)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            777777664

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.95  E-value=6.8e-27  Score=234.35  Aligned_cols=314  Identities=15%  Similarity=0.186  Sum_probs=208.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcC---
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQ-LKF-PYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD---  168 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~---  168 (423)
                      ..++|+..+...    +.+.+++.+ +.. ...| +.++..+||++++++++.  ++|++|+|+++++.+++.++++   
T Consensus        43 ~~ylD~~~~~~~----~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~ggt~A~~~al~~~~~~~~  116 (467)
T 1ax4_A           43 AVYIDLLTDSGT----NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQ  116 (467)
T ss_dssp             GCSEECSCSSSC----CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             ceeeecccCcCC----HHHHHHHHHHHhhcccccccCccHHHHHHHHHHHcCC--CcEEEcCCcHHHHHHHHHHHHHhhc
Confidence            346777543322    344444433 122 1356 455788999999999985  6899999999999999999988   


Q ss_pred             -CCCe---EEEcCCCchhhHHHHHHCCCeEEEecCC----------CCCCCCHHHHHHHhhc---CCceEEEEcCCCCCc
Q 014492          169 -PGDK---IVDCPPTFTMYEFDAAVNGAAVVKVPRK----------SDFSLNVELIADAVER---EKPKCIFLTSPNNPD  231 (423)
Q Consensus       169 -~gd~---Vl~~~p~y~~~~~~~~~~g~~~~~v~~~----------~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt  231 (423)
                       +||.   |+++.+.|..+...+...|++++.++.+          .++.+|+++|++++++   .++++|++++|+|||
T Consensus       117 ~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~  196 (467)
T 1ax4_A          117 KEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSA  196 (467)
T ss_dssp             HTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTT
T ss_pred             cCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCC
Confidence             9998   8888777777777888899999887632          1346899999999974   368999999999999


Q ss_pred             -CcCCCHHHHHHHHcC----CCEEEEccCCcc---c-------cCCCchhhhh-----ccCCcEEEEccChhhhccc-Cc
Q 014492          232 -GSIINDEDLLKILEM----PILVVLDEAYTE---F-------SGLESRMEWV-----KKHDNLIVLRTFSKRAGLA-GL  290 (423)
Q Consensus       232 -G~~~~~~~l~~i~~~----~~~li~Deay~~---~-------~~~~~~~~~~-----~~~~~~i~i~S~SK~~g~~-G~  290 (423)
                       |.+++.+++++|++.    |++||+||++..   +       .+.+.....+     ...+  +++.|+||.+|++ | 
T Consensus       197 gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G-  273 (467)
T 1ax4_A          197 GGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD--ALTMSAKKDPLLNIG-  273 (467)
T ss_dssp             TSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS--EEEEETTSTTCCSSC-
T ss_pred             CccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc--eEEEeccccCCCCcc-
Confidence             899998877766654    999999998653   0       1111111111     1122  4668999998765 4 


Q ss_pred             cccccccC-H-HHHHHHHHhcC------CC-CCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC
Q 014492          291 RVGYGAFP-L-SIIEYLWRAKQ------PY-NVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYP  360 (423)
Q Consensus       291 R~G~i~~~-~-~~~~~l~~~~~------~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p  360 (423)
                        ||++.+ + ++++.+.....      .+ ..+...+.++..+++. .+  ++..++..++++++.+.|++.+...+.|
T Consensus       274 --g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~  349 (467)
T 1ax4_A          274 --GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRLREAGIPIQYP  349 (467)
T ss_dssp             --EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTTCCBCSS
T ss_pred             --eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence              677777 6 78777654321      12 2343333333323321 11  1122223356677888887643222357


Q ss_pred             CCceEEEEE-------eCC-CCCHHHHHHHH-HhCCcEEEe-CCC------------CCCCCeEEEEec----ChhhHHH
Q 014492          361 SYSNFILCE-------VTS-GMDAKKLKDDL-AKMGVMIRH-YNN------------KELKGYVRVSVG----KPEHTDA  414 (423)
Q Consensus       361 ~~~~~~~~~-------~~~-~~~~~~l~~~L-~~~gI~v~~-~~~------------~~~~~~iRis~~----~~~~~~~  414 (423)
                      .+++++|++       ++. +.+..++.+.| .++||.+.+ +..            ....+++||+++    +.+++++
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~  429 (467)
T 1ax4_A          350 TGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDY  429 (467)
T ss_dssp             CCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHH
T ss_pred             CCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHH
Confidence            788999998       432 34578899999 799999988 321            012479999987    2455566


Q ss_pred             HHHHHhh
Q 014492          415 LMECLMH  421 (423)
Q Consensus       415 l~~al~~  421 (423)
                      +.++|++
T Consensus       430 ~~~~l~~  436 (467)
T 1ax4_A          430 IADALIG  436 (467)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
Confidence            6655554

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.95  E-value=1.3e-27  Score=238.84  Aligned_cols=310  Identities=14%  Similarity=0.076  Sum_probs=200.2

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ..+++++||..+.  ++++ ++|++.+++.+ +...  ++|+..-..++.+.+++.++ .+++|++++|+++++..+++.
T Consensus        54 ~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~  132 (453)
T 2cy8_A           54 VDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRV  132 (453)
T ss_dssp             TTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHH
T ss_pred             CCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHH
Confidence            3456789998875  4454 67899998876 3222  23444334556666666666 678999999999999999987


Q ss_pred             ---hcCCCCeEEEcCCCchhhHHHHHH-----------CCC------eEEEecCCCCCCCCHHHHHHHhhc--CCceEEE
Q 014492          166 ---VLDPGDKIVDCPPTFTMYEFDAAV-----------NGA------AVVKVPRKSDFSLNVELIADAVER--EKPKCIF  223 (423)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~  223 (423)
                         +.++ +.|++.+|+|+.+...+..           .|+      .++.+|.     .|++++++.+++  .++++|+
T Consensus       133 ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi  206 (453)
T 2cy8_A          133 ARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFI  206 (453)
T ss_dssp             HHHHHCC-CEEEEECC----------------------------CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEE
T ss_pred             HHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEE
Confidence               5554 6788888999865443221           133      2333332     389999999864  3567776


Q ss_pred             EcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCcccccccc
Q 014492          224 LTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF  297 (423)
Q Consensus       224 l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~  297 (423)
                      ++..+||||.+.+    .+++.++|+. |++||+||+|.++..+.. .....+...++   .|+||.++ +|+|+||+++
T Consensus       207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di---~s~sK~l~-~G~~~G~v~~  282 (453)
T 2cy8_A          207 AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVGNHGMQALLDVQPDL---TCLAKASA-GGLPGGILGG  282 (453)
T ss_dssp             ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTCTTHHHHHHTCCCSE---EEEEGGGG-TTSSCEEEEE
T ss_pred             ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccCchhhhHHhCCCCcE---EEEChhhh-CCcceEEEec
Confidence            6555688998776    5566666665 999999999997732221 11122222332   38999998 5999999999


Q ss_pred             CHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceE
Q 014492          298 PLSIIEYLWR-------AKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNF  365 (423)
Q Consensus       298 ~~~~~~~l~~-------~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~  365 (423)
                      ++++++.+..       ....++.+++++.++.++|+. .  .++..++++++++++.+.|+++    +.....++.|+|
T Consensus       283 ~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~  360 (453)
T 2cy8_A          283 REDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL--EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSG  360 (453)
T ss_dssp             CHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTE
T ss_pred             hHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeE
Confidence            9998887654       123467889999888888864 2  2445667777777777777653    544434667889


Q ss_pred             EEEEeCC-----C--------------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          366 ILCEVTS-----G--------------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       366 ~~~~~~~-----~--------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                      +|+++++     .              .+..++.+.|.++||.+.++      +.+|+++. +.++++++.++|+
T Consensus       361 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~------~~~~l~~~~t~~~i~~~l~~l~  429 (453)
T 2cy8_A          361 FHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR------GSVFLSAQHEREHVEHLVTTFD  429 (453)
T ss_dssp             EEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT------TEEECCTTCCHHHHHHHHHHHH
T ss_pred             EEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC------CCEEeeccCCHHHHHHHHHHHH
Confidence            9999974     1              12567889999999999543      24777644 3444444444443

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.95  E-value=7.1e-28  Score=240.39  Aligned_cols=316  Identities=13%  Similarity=0.096  Sum_probs=215.2

Q ss_pred             CCCCCeeEcCCCC--CCCC-CCHHHH-H-HHhc---C-CCC----CCCCCcchHHHHHHHHHHhC-CCCCcEEEeCCHHH
Q 014492           92 RKPEDIVKIDANE--NPYG-PPPEVR-E-ALGQ---L-KFP----YIYPDPESRRLRAALAKDSG-LESDHILVGCGADE  157 (423)
Q Consensus        92 ~~~~~~i~l~~~~--~~~~-~~~~v~-~-al~~---~-~~~----~~Y~~~g~~~lr~~ia~~~g-~~~~~i~~t~G~~~  157 (423)
                      ..++.++|+..+.  ++++ .+|++. + ++.+   . ...    ..|+.....++++.++++++ ..+++|++++|+++
T Consensus        51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gse  130 (449)
T 2cjg_A           51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGAL  130 (449)
T ss_dssp             TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHH
T ss_pred             CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHH
Confidence            4566788986653  5666 379999 8 7765   2 111    23555556789999999997 56789999999999


Q ss_pred             HHHHHHHHhc---C----------C-CCeEEEcCCCchhhHHHHHH---------CC-----CeEEEecCCC--CC----
Q 014492          158 LIDLIMRCVL---D----------P-GDKIVDCPPTFTMYEFDAAV---------NG-----AAVVKVPRKS--DF----  203 (423)
Q Consensus       158 al~~~~~~l~---~----------~-gd~Vl~~~p~y~~~~~~~~~---------~g-----~~~~~v~~~~--~~----  203 (423)
                      +++.+++.+.   +          + ||+|++..|+|+.+...+..         .+     ..++.+|.++  ..    
T Consensus       131 A~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  210 (449)
T 2cjg_A          131 AVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAM  210 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcccc
Confidence            9999987542   2          2 89999999999865432211         12     2566666533  11    


Q ss_pred             ----CCCHHHHHHHhhc--CCceEEEEcCCCCCcCc-CCCHHHHHHHHc---C-CCEEEEccCCccccCCCch--hhhhc
Q 014492          204 ----SLNVELIADAVER--EKPKCIFLTSPNNPDGS-IINDEDLLKILE---M-PILVVLDEAYTEFSGLESR--MEWVK  270 (423)
Q Consensus       204 ----~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~-~~~~~~l~~i~~---~-~~~li~Deay~~~~~~~~~--~~~~~  270 (423)
                          ..++++|++.+++  .++++|+++.++||||. +++.+++++|++   . |+++|+||+|.++...+..  ....+
T Consensus       211 ~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~  290 (449)
T 2cjg_A          211 AALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLD  290 (449)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHT
T ss_pred             chhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccC
Confidence                1456778888852  56778776666799995 666666666554   3 9999999999987643321  22223


Q ss_pred             cCCcEEEEccChhhhcccCccccccccCHHHHHHHH-----H--hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHH
Q 014492          271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-----R--AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKER  343 (423)
Q Consensus       271 ~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~-----~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  343 (423)
                      ..++++   |+||.+     |+||+++++++++.+.     .  ....++.+++++.++.++|+..+- +...+++++++
T Consensus       291 ~~~di~---t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~-~~~~~~~~~~~  361 (449)
T 2cjg_A          291 VAPDIV---AFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA-EGLFERAVQHG  361 (449)
T ss_dssp             CCCSEE---EECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH-HTHHHHHHHHH
T ss_pred             CCceEE---EecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence            333433   689977     7999999998877521     1  123467889999999988864211 34567777788


Q ss_pred             HHHHHHHcc----CCC-CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHH
Q 014492          344 ERLFKLLKD----VPF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDAL  415 (423)
Q Consensus       344 ~~l~~~L~~----~~~-~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l  415 (423)
                      +++.+.|++    ++. +...++.|+|+++++++..+..++.+.|.++||.+.+++    .+++||+++   +.++++++
T Consensus       362 ~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g----~~~iRi~~~~~~t~e~i~~~  437 (449)
T 2cjg_A          362 KYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAG----ADTVRFRPPLTVSTAEIDAA  437 (449)
T ss_dssp             HHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCceeeEeeccEEEEEEECChHHHHHHHHHHHHCCeEEecCC----CCEEEEECCCCCCHHHHHHH
Confidence            888888765    353 443456688888998643346789999999999999874    589999765   34444444


Q ss_pred             HHHHh
Q 014492          416 MECLM  420 (423)
Q Consensus       416 ~~al~  420 (423)
                      .++|+
T Consensus       438 l~~l~  442 (449)
T 2cjg_A          438 IAAVR  442 (449)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.95  E-value=4.4e-27  Score=230.55  Aligned_cols=280  Identities=15%  Similarity=0.139  Sum_probs=202.0

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~  200 (423)
                      +|+++...++|+++++++|.+ + .+++++++++++.++. ++++||+|+++.|.|.....    .++..|++++.+|.+
T Consensus        51 ~~~~~~~~~lr~~la~~~g~~-~-~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~  127 (393)
T 1n8p_A           51 RSQNPNRENLERAVAALENAQ-Y-GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL  127 (393)
T ss_dssp             TTCCHHHHHHHHHHHHHTTCS-E-EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH
T ss_pred             cCCChhHHHHHHHHHHHhCCC-c-EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC
Confidence            456667889999999999975 4 4444555899999999 99999999999999984333    345579999999863


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-----CCEEEEccCCccccCCCchhhhhccCCcE
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNL  275 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~  275 (423)
                           | ++++++++ +++++|++++|+||||.+++.+++.++|+.     |+++|+|++|..+... ...    ..+.+
T Consensus       128 -----d-~~l~~~i~-~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~----~~~~d  195 (393)
T 1n8p_A          128 -----L-NDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL----NFGAD  195 (393)
T ss_dssp             -----H-HHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG----GGTCS
T ss_pred             -----h-HHHHHhcc-cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH----HcCCe
Confidence                 7 89999997 689999999999999999999999999974     8999999999976542 221    22466


Q ss_pred             EEEccChhhhcccCccc-ccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc
Q 014492          276 IVLRTFSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLK  351 (423)
Q Consensus       276 i~i~S~SK~~g~~G~R~-G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~  351 (423)
                      +++.|+||.+|.+|+|+ ||+++ ++++++.+......  ...++..+.++...++.   +....++..++++.+.+.|+
T Consensus       196 i~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~l~~~L~  272 (393)
T 1n8p_A          196 IVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT---LHLRVRQAALSANKIAEFLA  272 (393)
T ss_dssp             EEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999 99998 58888888765432  34566666666666643   44555666777888888887


Q ss_pred             cCCC-Ce-e-cC----------------C-C-ceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCC----------CC---
Q 014492          352 DVPF-LN-P-YP----------------S-Y-SNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYN----------NK---  396 (423)
Q Consensus       352 ~~~~-~~-~-~p----------------~-~-~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~----------~~---  396 (423)
                      +.+. +. + .|                + . ++++++.+++. .+...+.+.|...++.++.|+          ..   
T Consensus       273 ~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~  352 (393)
T 1n8p_A          273 ADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGG  352 (393)
T ss_dssp             SCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCS
T ss_pred             hCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcceeeccccccccc
Confidence            7654 22 1 22                1 3 67889999732 234445555433344443221          10   


Q ss_pred             ----------CCCCeEEEEecChh---hHHHHHHHHhhh
Q 014492          397 ----------ELKGYVRVSVGKPE---HTDALMECLMHL  422 (423)
Q Consensus       397 ----------~~~~~iRis~~~~~---~~~~l~~al~~l  422 (423)
                                ..++.||||++..+   +.+++.++|+++
T Consensus       353 ~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~  391 (393)
T 1n8p_A          353 IPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             SCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence                      11479999998543   445566666543

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.95  E-value=1.3e-26  Score=234.17  Aligned_cols=312  Identities=14%  Similarity=0.049  Sum_probs=224.4

Q ss_pred             CCCCHHHHHHHhcC-CCC-CCC-CCcchH----HHHHHHHHHhCCC--CCcEE---EeCCHHHHHHHHHHHhcCC-----
Q 014492          107 YGPPPEVREALGQL-KFP-YIY-PDPESR----RLRAALAKDSGLE--SDHIL---VGCGADELIDLIMRCVLDP-----  169 (423)
Q Consensus       107 ~~~~~~v~~al~~~-~~~-~~Y-~~~g~~----~lr~~ia~~~g~~--~~~i~---~t~G~~~al~~~~~~l~~~-----  169 (423)
                      ..++|.+.+++.+. ... ..| ..++..    ++++.+++++|++  ++++.   +|+|+++++.+++.++..+     
T Consensus        66 ~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~  145 (502)
T 3hbx_A           66 TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR  145 (502)
T ss_dssp             CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence            44578888888763 221 112 222222    5677788889987  55544   5899999999998877655     


Q ss_pred             ---CC-----eEEEcCCCchhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHH
Q 014492          170 ---GD-----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL  240 (423)
Q Consensus       170 ---gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l  240 (423)
                         |+     .|+++.++|..+...++..|++++.+|.+++ +.+|++++++++. +++++|++++|+||||.+.+.++|
T Consensus       146 ~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-~~t~~v~~~~~~n~tG~~~~l~~I  224 (502)
T 3hbx_A          146 KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVD-ENTICVAAILGSTLNGEFEDVKLL  224 (502)
T ss_dssp             HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCC-TTEEEEEEEBSCTTTCCBCCHHHH
T ss_pred             HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHh-hCCEEEEEecCCCCCCcccCHHHH
Confidence               76     8999999999999999999999999997654 8899999999997 689999999999999999999999


Q ss_pred             HHHHcC-------CCEEEEccCCccccC---CCchhhhhccCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhc
Q 014492          241 LKILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAK  309 (423)
Q Consensus       241 ~~i~~~-------~~~li~Deay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~  309 (423)
                      .++|+.       |+++++|++|..+..   .+.....+....-.++..+.+|. ++++.++|+++.. ++.+.......
T Consensus       225 ~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l~~~~~~~  303 (502)
T 3hbx_A          225 NDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLPEELIFH  303 (502)
T ss_dssp             HHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGSCGGGCEE
T ss_pred             HHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccc-cCCCCCeEEEEEeCHHHhhHHhccC
Confidence            999973       899999999986541   11111111123445677788995 4577889987764 44432221111


Q ss_pred             CC------------CCC---cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC--CCceEEEEEeCC
Q 014492          310 QP------------YNV---SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP--SYSNFILCEVTS  372 (423)
Q Consensus       310 ~~------------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p--~~~~~~~~~~~~  372 (423)
                      ..            ++.   ..+++.++...+.. +.+.+..++..++++++.+.|++++.+.+.+  ...+++.+++++
T Consensus       304 ~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~  382 (502)
T 3hbx_A          304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH-EGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKD  382 (502)
T ss_dssp             ECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESS
T ss_pred             cccccCCCCCccccCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecC
Confidence            11            111   23344444444433 3457778888899999999999998666543  477889999874


Q ss_pred             --CCCHHHHHHHHHhCCcEEEeCCCC---CCCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          373 --GMDAKKLKDDLAKMGVMIRHYNNK---ELKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       373 --~~~~~~l~~~L~~~gI~v~~~~~~---~~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                        ..+..++.+.|.++||.+..+..+   ....++||+++   +.++++.|.++|++
T Consensus       383 ~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~  439 (502)
T 3hbx_A          383 SSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEK  439 (502)
T ss_dssp             CSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHH
Confidence              256779999999999998654332   23468999998   67777888777764

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.95  E-value=3.9e-26  Score=227.69  Aligned_cols=317  Identities=13%  Similarity=0.082  Sum_probs=218.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCCc----c---h---HHHH-HHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPDP----E---S---RRLR-AALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~~----g---~---~~lr-~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +.|+|..++++.  +|++.+++.+.   .+..+||..    +   .   +++. +.+++++|.+.. .++++|+++++..
T Consensus        46 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~-~v~~~sGs~a~~~  122 (447)
T 3h7f_A           46 DTLEMIASENFV--PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFA-NVQPHSGAQANAA  122 (447)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCCSSHHHHHHH
T ss_pred             CceeEecCCCCC--CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCce-EEEeCCHHHHHHH
Confidence            458998877765  89999999763   222334321    1   1   2334 888889997652 3336777889999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhh-HH--H--HHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMY-EF--D--AAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~-~~--~--~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.+++++||+|+++.|+|..+ ..  .  ..-.+..++.++.+ +++.+|++++++.+.+.++++|++++|+||++.  
T Consensus       123 a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--  200 (447)
T 3h7f_A          123 VLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVL--  200 (447)
T ss_dssp             HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCCSCC--
T ss_pred             HHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCCCcc--
Confidence            9999999999999999998762 11  1  11134567777754 456899999999996567899999999999886  


Q ss_pred             CHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC-
Q 014492          236 NDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY-  312 (423)
Q Consensus       236 ~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~-  312 (423)
                      +.+++.++|+. |+++|+||+|.. +.+.+.......  ...+++.|+||.+  +|+|.||+++++++++.+.....++ 
T Consensus       201 ~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~--~~di~~~s~sK~l--~G~~gG~i~~~~~~~~~l~~~~~~~~  276 (447)
T 3h7f_A          201 DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP--HADVVSTTVHKTL--GGGRSGLIVGKQQYAKAINSAVFPGQ  276 (447)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT--TCSEEEEESSGGG--CCCSCEEEEECGGGHHHHHHHHTTTT
T ss_pred             CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC--CCcEEEecCCcCC--CCCCeEEEEECHHHHHHHhhhcCCcc
Confidence            88999999988 999999999753 222111111111  1237899999976  5889999999999988887765543 


Q ss_pred             --CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccC----CCCeec--CCCceEEEEEeCC-CCCHHHHHH
Q 014492          313 --NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDV----PFLNPY--PSYSNFILCEVTS-GMDAKKLKD  381 (423)
Q Consensus       313 --~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~--p~~~~~~~~~~~~-~~~~~~l~~  381 (423)
                        +.+...+.++..++..  .+++++.++++.++++++.+.|++.    +++.+.  +..++++|+++.. +.+...+.+
T Consensus       277 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (447)
T 3h7f_A          277 QGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAED  356 (447)
T ss_dssp             CSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHH
T ss_pred             cCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHH
Confidence              2333334444444332  3467888999999999999999876    224443  3577889998853 557777778


Q ss_pred             HHHhCCcEEE----eCC--CCCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          382 DLAKMGVMIR----HYN--NKELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       382 ~L~~~gI~v~----~~~--~~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      .|.++||.++    ++.  .+..++++||++.       ++++++++.++|++
T Consensus       357 ~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~  409 (447)
T 3h7f_A          357 LLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT  409 (447)
T ss_dssp             HHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             HHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence            7888899998    552  2445678999873       34566666666554

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.95  E-value=5.9e-26  Score=224.39  Aligned_cols=280  Identities=19%  Similarity=0.164  Sum_probs=199.8

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~  200 (423)
                      +|+++...+|++++++++|.+.  .++++++++++..++.+++++||+|+++.|+|..+..    .++..|++++.++.+
T Consensus        78 r~~~p~~~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~  155 (430)
T 3ri6_A           78 RSSNPTVEDLEQRLKNLTGALG--VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM  155 (430)
T ss_dssp             --CCHHHHHHHHHHHHHHTCSE--EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             CCCCHHHHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence            4577778999999999999643  4555566799999999999999999999999987766    567799999999864


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                           |+++++++++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++|...... ...    ..+.++++.
T Consensus       156 -----d~~~l~~ai~-~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~-~~~----~~g~div~~  224 (430)
T 3ri6_A          156 -----DSLAVEHACD-ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLL-EAK----RLGVDIEVL  224 (430)
T ss_dssp             -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTC-CGG----GGTCSEEEE
T ss_pred             -----CHHHHHHhhC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChH----HcCCEEEEE
Confidence                 8999999997 689999999999999999999999999998 9999999999855431 111    233458999


Q ss_pred             cChhhhcccCcccccccc---CHH------------------HHHHHHHh---cCCCCCcHHHHHHHHHHhCChHHHHHH
Q 014492          280 TFSKRAGLAGLRVGYGAF---PLS------------------IIEYLWRA---KQPYNVSVAAEVAACAALQNPIYLEKV  335 (423)
Q Consensus       280 S~SK~~g~~G~R~G~i~~---~~~------------------~~~~l~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~  335 (423)
                      |+||.++.+|..+|.++.   +..                  +++++...   .....+++.....+...   .+.+..+
T Consensus       225 S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~---l~~l~~r  301 (430)
T 3ri6_A          225 SSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLG---LETMALR  301 (430)
T ss_dssp             ECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH---HHHHHHH
T ss_pred             CCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhh---hhhHHHH
Confidence            999999866655544433   211                  12222211   11123455544433333   3556666


Q ss_pred             HHHHHHHHHHHHHHHccCCCCe-e-cCC---------------Cce-EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC-
Q 014492          336 KEALIKERERLFKLLKDVPFLN-P-YPS---------------YSN-FILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-  396 (423)
Q Consensus       336 ~~~~~~~~~~l~~~L~~~~~~~-~-~p~---------------~~~-~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-  396 (423)
                      .++..++..++.+.|++.+.+. + +|+               .|. .+++++++..+...|.+.|...++.+..|+.. 
T Consensus       302 ~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~s  381 (430)
T 3ri6_A          302 IERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKEASYRFMDALKLIRRATNIHDNKS  381 (430)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCc
Confidence            7777889999999999887665 3 343               144 89999973344556666665445545444321 


Q ss_pred             ----------------------CCCCeEEEEecChhhHHHHHHHHhh
Q 014492          397 ----------------------ELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       397 ----------------------~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                                            ..+++||||++.++ .++|.+.|++
T Consensus       382 li~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~-~~dl~~dl~~  427 (430)
T 3ri6_A          382 LILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEE-IEDLKEDILQ  427 (430)
T ss_dssp             EEECTGGGC---------CGGGSCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred             eeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC-HHHHHHHHHH
Confidence                                  23679999999766 4777777664

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.95  E-value=3.8e-26  Score=221.83  Aligned_cols=296  Identities=16%  Similarity=0.142  Sum_probs=220.0

Q ss_pred             CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492          110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (423)
Q Consensus       110 ~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (423)
                      ++++.+++.+. .....++.++..++|+++++++|.+  ++++++|+++++..++..+ +++||+|+++.|+|..+...+
T Consensus        15 ~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~   92 (367)
T 3nyt_A           15 KDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAK--YCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETV   92 (367)
T ss_dssp             HHHHHHHHHHHHHHCCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCccCChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHH
Confidence            46677777663 2223336677899999999999974  7999999999999999998 899999999999999999999


Q ss_pred             HHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCc
Q 014492          188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES  264 (423)
Q Consensus       188 ~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~  264 (423)
                      +..|++++.++.+.+ +.+|++++++.++ +++++|+   |+||||...+.+++.++|+. |+++|+|++|..+. +.+.
T Consensus        93 ~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~  168 (367)
T 3nyt_A           93 ALLGAKPVYVDIDPRTYNLDPQLLEAAIT-PRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGK  168 (367)
T ss_dssp             HHTTCEEEEECBCTTTCSBCGGGTGGGCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE
T ss_pred             HHcCCEEEEEecCCccCCcCHHHHHHhcC-cCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCe
Confidence            999999999997644 8899999999996 6888888   88999999999999999987 99999999998543 2222


Q ss_pred             hhhhhccCCcEEEEccC--hhhhcccCcccccccc-CHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHhC
Q 014492          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ  327 (423)
Q Consensus       265 ~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~--------------~~~~~~~~~~a~~~~l~  327 (423)
                      .....   + .+++.||  +|.+|.+|. .|+++. ++++.+++.....              .+.++.+.+.++...++
T Consensus       169 ~~~~~---~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~  243 (367)
T 3nyt_A          169 RSCNL---S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLE  243 (367)
T ss_dssp             ETTSS---S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHH
T ss_pred             eccCC---C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHH
Confidence            22111   1 4788887  899986576 788888 5778887776543              24567777766666664


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCC--c--eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C-----
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSY--S--NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K-----  396 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~--~--~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~-----  396 (423)
                      .   +++..++.+++++++.+.|++++.... .+..  .  .++.+.++   +.+++.+.|.++||.++.+.. +     
T Consensus       244 ~---~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~L~~~GI~~~~~~~~~~~~~~  317 (367)
T 3nyt_A          244 I---FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---NRESVQASLKAAGVPTAVHYPIPLNKQP  317 (367)
T ss_dssp             T---HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---SHHHHHHHHHHHTCCCBCSCSSCGGGSG
T ss_pred             H---HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---CHHHHHHHHHHCCCceeccCCCccccCh
Confidence            3   455666677778888888888753222 1221  1  12344443   688999999999999986532 0     


Q ss_pred             --C------------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          397 --E------------LKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       397 --~------------~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                        .            ....+|+++.   +.++++++.++++..
T Consensus       318 ~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          318 AVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             GGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             hhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence              0            0247899875   566777777777654

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.94  E-value=2e-26  Score=224.11  Aligned_cols=295  Identities=15%  Similarity=0.155  Sum_probs=214.7

Q ss_pred             CHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHH
Q 014492          110 PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA  187 (423)
Q Consensus       110 ~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~  187 (423)
                      ++++.+++.+. .....+++++..++|+++++++|.+  ++++++|+++++..++.++ +++||+|+++.|+|..+...+
T Consensus        16 ~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~   93 (373)
T 3frk_A           16 EYEIKFKFEEIYKRNWFILGDEDKKFEQEFADYCNVN--YCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAV   93 (373)
T ss_dssp             HHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHTSS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCccCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence            35667777653 2222235667899999999999964  8899999999999999999 899999999999999999999


Q ss_pred             HHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCc
Q 014492          188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (423)
Q Consensus       188 ~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~  264 (423)
                      +..|++++.++.+ +++.+|++++++.+. +++++|+   |+||||...+.+++.++|+. |+++|+|++|..+.. ...
T Consensus        94 ~~~g~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~  169 (373)
T 3frk_A           94 SYTGAKPIFVEPDIRTYNIDPSLIESAIT-EKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM  169 (373)
T ss_dssp             HHHSCEEEEECEETTTTEECGGGTGGGCC-TTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred             HHcCCEEEEEeccccccCcCHHHHHHhcC-CCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCE
Confidence            9999999999965 567899999999997 5888888   78899999999999999998 999999999986432 222


Q ss_pred             hhhhhccCCcEEEEccCh--hhhcccCccccccccC-HHHHHHHHHhcC--------------CCCCcHHHHHHHHHHhC
Q 014492          265 RMEWVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFP-LSIIEYLWRAKQ--------------PYNVSVAAEVAACAALQ  327 (423)
Q Consensus       265 ~~~~~~~~~~~i~i~S~S--K~~g~~G~R~G~i~~~-~~~~~~l~~~~~--------------~~~~~~~~~~a~~~~l~  327 (423)
                      .....    ..+++.||+  |.++..| +.|+++.+ +++.+++.....              .+.++.+...+....+ 
T Consensus       170 ~~~~~----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~-  243 (373)
T 3frk_A          170 KVGSL----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL-  243 (373)
T ss_dssp             ETTSS----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-
T ss_pred             ecccc----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-
Confidence            11111    137778877  8776324 37888875 557776665432              1234555554444433 


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCc--eE--EEEEeCCCCCHHHHHHHHHhCCcEEEeCCC-C----
Q 014492          328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYS--NF--ILCEVTSGMDAKKLKDDLAKMGVMIRHYNN-K----  396 (423)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~--~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~-~----  396 (423)
                        +.+++..++.+++.+++.+.|++++ +.+.  +...  .+  +.+..   .+.+++.+.|.++||.++.+.. +    
T Consensus       244 --~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~~~~~~~  317 (373)
T 3frk_A          244 --KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS---EKRDELQKYLNNNGIGTLIHYPIPIHLQ  317 (373)
T ss_dssp             --HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE---SSHHHHHHHHHHTTBCCBCSCSSCGGGS
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe---CCHHHHHHHHHHCCCCcccCcCCccccC
Confidence              3355677777888889999998887 4432  1212  22  22333   3688999999999999986541 0    


Q ss_pred             -----------CC-------CCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          397 -----------EL-------KGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       397 -----------~~-------~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                                 ..       .+.+||++.   +.++++++.++|++.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~  364 (373)
T 3frk_A          318 QAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAW  364 (373)
T ss_dssp             GGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred             hHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence                       00       157999986   566777777777654

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.94  E-value=2.1e-25  Score=217.32  Aligned_cols=308  Identities=16%  Similarity=0.099  Sum_probs=222.7

Q ss_pred             CCCCCCCCCCHHHHHHHhcC-CCCCCCC-CcchHHHHHHH-HHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEc
Q 014492          101 DANENPYGPPPEVREALGQL-KFPYIYP-DPESRRLRAAL-AKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDC  176 (423)
Q Consensus       101 ~~~~~~~~~~~~v~~al~~~-~~~~~Y~-~~g~~~lr~~i-a~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~  176 (423)
                      ..+++++++++++.+++.+. ..+..++ .+...+||+++ ++++| ..+++++++|+++++.+++.++ +++||+|+++
T Consensus         6 ~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~   84 (377)
T 3ju7_A            6 PFLRASTVPVIEYLDELKEIDASHIYTNYGPINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRKKGKYALMP   84 (377)
T ss_dssp             CSCCCCCCCGGGGHHHHHHHHHHTCCSSSCHHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEE
T ss_pred             eccCCCCCCcHHHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence            34478898888888888763 2222223 45678999999 99999 3567888999999999999988 8999999999


Q ss_pred             CCCchhhHHHHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCC--ceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEc
Q 014492          177 PPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLD  253 (423)
Q Consensus       177 ~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~--~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~D  253 (423)
                      .|+|..+...++..|++++.++.+ +++.+|++++++++..++  +|+|+   |+||+|.+.+.+++.++|+.|++||+|
T Consensus        85 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~~~~~vi~D  161 (377)
T 3ju7_A           85 SFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEKKGVPVVVD  161 (377)
T ss_dssp             SSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHHTTCCBEEE
T ss_pred             CCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHhcCCEEEEE
Confidence            999999999999999999999976 578999999999883345  88887   788999999999999999988999999


Q ss_pred             cCCccccC-CCchh-hhhccCCcEEEEcc--ChhhhcccCcccccccc-CHHHHHHHHHhcC--------------CCCC
Q 014492          254 EAYTEFSG-LESRM-EWVKKHDNLIVLRT--FSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--------------PYNV  314 (423)
Q Consensus       254 eay~~~~~-~~~~~-~~~~~~~~~i~i~S--~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~--------------~~~~  314 (423)
                      ++|+.+.. .+... ...  .+  +.+.|  .+|.++. | +.|+++. ++++.+++...+.              .+.+
T Consensus       162 ~a~a~g~~~~~~~~g~~~--~d--~~~~S~~~~K~l~~-g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~  235 (377)
T 3ju7_A          162 AAPGFGLMNGGMHYGQDF--SG--MIIYSFHATKPFGI-G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKM  235 (377)
T ss_dssp             CTTCTTCEETTEETTTTC--SS--EEEEECBTTSSSCC-B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCC
T ss_pred             CCCccCCeECCEeccCCC--Cc--EEEEECCCCCcCCC-C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCC
Confidence            99985432 11111 010  12  44445  4698874 5 5677776 5677777776543              2345


Q ss_pred             cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe--ecCCCc-----eEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN--PYPSYS-----NFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~~p~~~-----~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      +.+.+..+...+   +.++...++.+++++++.+.|++++.+.  ..+..+     .|+.+.+++..+.+++.+.|.++|
T Consensus       236 ~~~~aa~~~~~l---~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g  312 (377)
T 3ju7_A          236 SEYAAAIGIATM---KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQK  312 (377)
T ss_dssp             CHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTT
T ss_pred             CHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCC
Confidence            666655555555   3455666677778888888888776431  222221     245667765556899999999999


Q ss_pred             cEEEeCCCC--------C-------------CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          388 VMIRHYNNK--------E-------------LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       388 I~v~~~~~~--------~-------------~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      |.++.+...        .             ..+.|||.+.   +.++.+++.++|++
T Consensus       313 I~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~  370 (377)
T 3ju7_A          313 IEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ  370 (377)
T ss_dssp             BCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred             CceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence            999865410        0             0236899875   45566666666654

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.94  E-value=6.4e-26  Score=223.23  Aligned_cols=268  Identities=15%  Similarity=0.101  Sum_probs=203.9

Q ss_pred             HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHHhcCCCCeEEEcC-C
Q 014492          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVDCP-P  178 (423)
Q Consensus       111 ~~v~~al~~~---------~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~--t~G~~~al~~~~~~l~~~gd~Vl~~~-p  178 (423)
                      ++|++++.+.         ..++.|++.+..+|++.+|+++|.+.. +++  ++|+++++..++.++++|||+|+++. |
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l~g~e~a-lv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~  124 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESA-LVRPHFVNGTHALGAALFGNLRPGNTMLSVCGE  124 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSEE-EEETTCCSHHHHHHHHHHHHCCTTCEEEESSSS
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCcce-EEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5677777642         123567888888999999999997543 443  77888999999999999999999998 9


Q ss_pred             CchhhHHH-----------HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcC----CCCCcCcCCCHHHHHH
Q 014492          179 TFTMYEFD-----------AAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLLK  242 (423)
Q Consensus       179 ~y~~~~~~-----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~~~l~~  242 (423)
                      .|..+...           ++..|++++.++.++++.+|++++++++++ +++|+|++++    |+||||.+.+.+++.+
T Consensus       125 ~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~  204 (427)
T 3i16_A          125 PYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVD  204 (427)
T ss_dssp             CCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHH
T ss_pred             ccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHH
Confidence            99877633           355799999999877778999999999974 5899999998    9999999999999999


Q ss_pred             HHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHhcCC--CC--C
Q 014492          243 ILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN--V  314 (423)
Q Consensus       243 i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~--~  314 (423)
                      +|+.   |+++++|++|..+.....+..    .+.+++++|+||.+|.+| .+.||+++++++++++......  .+  .
T Consensus       205 la~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~  280 (427)
T 3i16_A          205 CVKNIRKDIICFVDNCYGEFMDTKEPTD----VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGEC  280 (427)
T ss_dssp             HHHHHCTTSEEEEECTTTTTSSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGC
T ss_pred             HHHHhCCCCEEEEECCCccccccCCccc----cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccC
Confidence            9975   999999999998764333222    234589999999998655 6679999999999999874332  21  1


Q ss_pred             cH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014492          315 SV-AAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM  386 (423)
Q Consensus       315 ~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~~  386 (423)
                      ++ ..  ++..+++....+..+.++..+++.++.+.|+++++ .++|+.+.     .+.+.+.+......|++.|...
T Consensus       281 ~~~~~--~a~~~l~gl~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~~i~~i~l~~~~~~~~f~~~l~~~  355 (427)
T 3i16_A          281 GSTFG--VVRSMYQGLFLAPHISMEALKGAILCSRIMELAGF-EVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQTG  355 (427)
T ss_dssp             CCCTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCEEEECSSHHHHHHHHHHHHHT
T ss_pred             CccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCccEEEEEEECCHHHHHHHHHHHhhc
Confidence            11 11  12223333344567788888999999999999986 55666554     7778886444466788888755

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.94  E-value=1.5e-25  Score=220.67  Aligned_cols=281  Identities=10%  Similarity=0.051  Sum_probs=200.3

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~  200 (423)
                      +|+++...++|+.+|+++|.+  ++++++|++++++.++.+++++||+|+++.|.|......+    +..|+++..++.+
T Consensus        78 r~~~p~~~~le~~lA~l~g~~--~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~  155 (415)
T 2fq6_A           78 RRGTLTHFSLQQAMCELEGGA--GCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL  155 (415)
T ss_dssp             TTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred             CCCCchHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC
Confidence            345666789999999999964  5667788899999999999999999999999998666443    3479999999742


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (423)
                           |+++++++++ +++++|++++|+||||.+++.+++.++|+.   |+++|+|++|..+... .+.    ..+.+++
T Consensus       156 -----d~~~le~ai~-~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~-~p~----~~g~Div  224 (415)
T 2fq6_A          156 -----IGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLF-KAL----DFGIDVS  224 (415)
T ss_dssp             -----CGGGGGGGCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSS-CGG----GGTCSEE
T ss_pred             -----CHHHHHHhhc-cCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccC-Ccc----ccCCeEE
Confidence                 7899999997 689999999999999999999999999975   8999999999865332 122    2345689


Q ss_pred             EccChhhhcccCcc-ccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC
Q 014492          278 LRTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP  354 (423)
Q Consensus       278 i~S~SK~~g~~G~R-~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~  354 (423)
                      +.|++|.+|.+|.+ .||+++++++++.+.....  ....++.....+...+   +++....++..++.+.+.+.|++.+
T Consensus       225 ~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l---~~l~~r~~~~~~n~~~l~~~L~~~~  301 (415)
T 2fq6_A          225 IQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGL---RTLGVRLRQHHESSLKVAEWLAEHP  301 (415)
T ss_dssp             EEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             EEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999999988765 5899998888777765443  2234555444443433   4556666777788888888888765


Q ss_pred             CCe-e-cC----------------CCceEEEEEeCCC---CCHHHHHHHHHhCCcEEEeCCC------------------
Q 014492          355 FLN-P-YP----------------SYSNFILCEVTSG---MDAKKLKDDLAKMGVMIRHYNN------------------  395 (423)
Q Consensus       355 ~~~-~-~p----------------~~~~~~~~~~~~~---~~~~~l~~~L~~~gI~v~~~~~------------------  395 (423)
                      .+. + +|                ..+..+++.++++   .+...+.+.|...++.++.|+.                  
T Consensus       302 ~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~  381 (415)
T 2fq6_A          302 QVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQ  381 (415)
T ss_dssp             TEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTT
T ss_pred             CeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccch
Confidence            432 1 22                2467888999743   2333444443323333332211                  


Q ss_pred             ---CCCCCeEEEEecChh---hHHHHHHHHhh
Q 014492          396 ---KELKGYVRVSVGKPE---HTDALMECLMH  421 (423)
Q Consensus       396 ---~~~~~~iRis~~~~~---~~~~l~~al~~  421 (423)
                         ...++.||||++.++   +.++|.++|+.
T Consensus       382 ~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~  413 (415)
T 2fq6_A          382 GEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR  413 (415)
T ss_dssp             CCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             hhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence               112479999998644   34455555554

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.94  E-value=7.7e-26  Score=221.87  Aligned_cols=267  Identities=15%  Similarity=0.153  Sum_probs=201.8

Q ss_pred             HHHHHHHhcCC---------CCCCCCCcchHHHHHHHHHHhCCCCCcEEE--eCCHHHHHHHHHHHhcCCCCeEEEcC-C
Q 014492          111 PEVREALGQLK---------FPYIYPDPESRRLRAALAKDSGLESDHILV--GCGADELIDLIMRCVLDPGDKIVDCP-P  178 (423)
Q Consensus       111 ~~v~~al~~~~---------~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~--t~G~~~al~~~~~~l~~~gd~Vl~~~-p  178 (423)
                      .++++++.+..         .++.|++.+..+|++.+|+++|.+. .+++  ++|+++++..++.+++++||+|+++. |
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~e~-alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~  110 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKTEA-ALVRPQIISGTHAISTVLFGILRPDDELLYITGQ  110 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTCSE-EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSS
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCCCc-EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence            45666665421         1356788888899999999999643 3333  78889999999999999999999998 9


Q ss_pred             CchhhHHH----------HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcC----CCCCcCcCCCHHHHHHHH
Q 014492          179 TFTMYEFD----------AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS----PNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       179 ~y~~~~~~----------~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~----p~NPtG~~~~~~~l~~i~  244 (423)
                      .|..+...          ++..|++++.++.++++.+|+++++++++ +++++|++++    |+||||.+.+++++.+++
T Consensus       111 ~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~-~~tklV~i~~s~g~p~nptg~v~~l~~I~~la  189 (409)
T 3jzl_A          111 PYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMT-PKTKMIGIQRSRGYADRPSFTIEKIKEMIVFV  189 (409)
T ss_dssp             CCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred             CcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhcc-CCCeEEEEECCCCCCCCCcCccccHHHHHHHH
Confidence            99887743          35679999999987778899999999997 6899999999    999999999999999999


Q ss_pred             cC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHhcCC--C----CC
Q 014492          245 EM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--Y----NV  314 (423)
Q Consensus       245 ~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~----~~  314 (423)
                      +.   |+++++|++|..+........    .+.+++++|+||.+|.+| .+.||+++++++++++......  +    +.
T Consensus       190 ~~~~~~~~livD~a~~~~~~~~~p~~----~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~  265 (409)
T 3jzl_A          190 KNINPEVIVFVDNCYGEFVEYQEPPE----VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGA  265 (409)
T ss_dssp             HHHCTTCEEEEECTTCTTTSSCCSGG----GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCC
T ss_pred             HhhCCCCEEEEeCCcccccccCCccc----cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccc
Confidence            75   999999999998764222221    234589999999998655 3469999999999998874332  1    11


Q ss_pred             cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHhCC
Q 014492          315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                      ......++...+   .....++++..+++.++.+.|+++++ .+.|+.+.     .+.+.+.+......+++.|.+..
T Consensus       266 ~~~~~~~~l~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~~~~~~~~~~~L~~~~  339 (409)
T 3jzl_A          266 SLYSLLEMYQGF---FLAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHNKEKMVAFAQAIQAAS  339 (409)
T ss_dssp             CTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSCHHHHHHHHHHHHHTS
T ss_pred             cHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence            111122233333   34566777788899999999999886 54555443     66777764455667888888654

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.93  E-value=9.4e-25  Score=218.19  Aligned_cols=283  Identities=13%  Similarity=0.056  Sum_probs=205.5

Q ss_pred             HHHHHHHHHHhCCCCCcEEEeCCHHH-HHHHHHHHhcC--CCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCC
Q 014492          132 RRLRAALAKDSGLESDHILVGCGADE-LIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSL  205 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i~~t~G~~~-al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~  205 (423)
                      .++++.+++++|++++ +++|+|+++ ++..++.++..  +|+.|+++.+.|..+...++..|++++.++.   ++++.+
T Consensus       136 ~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~  214 (456)
T 2z67_A          136 NKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYV  214 (456)
T ss_dssp             HHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred             HHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCc
Confidence            4588999999999776 999999994 55445554433  6788999999999999999999999999986   567789


Q ss_pred             CHHHHHHHh-hc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEE
Q 014492          206 NVELIADAV-ER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVL  278 (423)
Q Consensus       206 d~~~l~~~i-~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i  278 (423)
                      |++++++++ +.   .++.+|++++||||||.+.+.++|.++|+. |+++++|++|..+..+..  ....+.. ...+++
T Consensus       215 d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~-~~D~~~  293 (456)
T 2z67_A          215 PVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-RVDAVV  293 (456)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS-CCSEEE
T ss_pred             CHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC-CCCEEE
Confidence            999999999 42   477888889999999999999999999998 999999999986653211  1111111 333678


Q ss_pred             ccChhhhcccCcccccccc-CHHHHHHHHHhcCCCC--CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC-
Q 014492          279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN--VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP-  354 (423)
Q Consensus       279 ~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-  354 (423)
                      .|++|.+ .++.++||+++ ++++++.+......+.  .+.+++.++...+. .+++++..++..++++++.+.|++++ 
T Consensus       294 ~s~hK~~-~~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-~~~~~~~~~~~~~~~~~l~~~L~~~~~  371 (456)
T 2z67_A          294 SSSDKNL-LTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-SKNYLELVKNQKNSKKLLDELLNDLSK  371 (456)
T ss_dssp             EEHHHHH-CCCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCc-CCCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            8999955 46789999999 6788877743322222  12334444444443 35678889999999999999998873 


Q ss_pred             --CCeecCCCceEEEEEe--CCCCCHHHHHHHHHhCCc---EEE------eCCC--CCCCCeEEEEec---ChhhHHHHH
Q 014492          355 --FLNPYPSYSNFILCEV--TSGMDAKKLKDDLAKMGV---MIR------HYNN--KELKGYVRVSVG---KPEHTDALM  416 (423)
Q Consensus       355 --~~~~~p~~~~~~~~~~--~~~~~~~~l~~~L~~~gI---~v~------~~~~--~~~~~~iRis~~---~~~~~~~l~  416 (423)
                        +..+.+.. +++++.+  ++ . ..++.+.|.++||   .+.      .+..  ....+++|++++   +.++++++.
T Consensus       372 ~~g~~v~~~~-~~v~~~~~~~~-~-~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l  448 (456)
T 2z67_A          372 KTGGKFLDVE-SPIASCISVNS-D-PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSV  448 (456)
T ss_dssp             HSSCCBCCCC-CSSEEEEECSS-C-HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHH
T ss_pred             ccCCEecCCC-CeEEEEEeccc-H-HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHH
Confidence              35554444 7777777  42 1 5788999998875   443      1111  122479999976   566667777


Q ss_pred             HHHhh
Q 014492          417 ECLMH  421 (423)
Q Consensus       417 ~al~~  421 (423)
                      ++|++
T Consensus       449 ~~L~~  453 (456)
T 2z67_A          449 SKLEK  453 (456)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            77665

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.93  E-value=1.3e-24  Score=213.29  Aligned_cols=279  Identities=15%  Similarity=0.104  Sum_probs=200.0

Q ss_pred             CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-----HHHCCCeEEEec
Q 014492          124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVP  198 (423)
Q Consensus       124 ~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~  198 (423)
                      .+|+++...+|++.+++++|.+  +.++++++++++..+ ..++++||+|+++.|+|......     ++..|++++.++
T Consensus        62 ~r~~~p~~~~l~~~la~l~g~~--~~~~~~sG~~Ai~~~-~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~  138 (400)
T 3nmy_A           62 SRTHNPTRFAYERCVAALEGGT--RAFAFASGMAATSTV-MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD  138 (400)
T ss_dssp             TTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred             ccCCCHHHHHHHHHHHHHhCCC--CEEEecCHHHHHHHH-HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence            3456777889999999999864  566666679999884 56889999999999999844433     334699999998


Q ss_pred             CCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEE
Q 014492          199 RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV  277 (423)
Q Consensus       199 ~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~  277 (423)
                      .+     |+++++++++ +++++|++++|+||||.+++.+++.++|+. |+++|+||+|..+.... ..    ..+.+++
T Consensus       139 ~~-----d~~~l~~~i~-~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~----~~g~div  207 (400)
T 3nmy_A          139 LT-----DPAAFKAAIR-ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR-PL----SLGADLV  207 (400)
T ss_dssp             TT-----SHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-GG----GGTCSEE
T ss_pred             CC-----CHHHHHHHhc-cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC-hh----hcCCcEE
Confidence            53     7999999997 689999999999999999999999999987 99999999998433211 11    1245589


Q ss_pred             EccChhhhcccCccccc--cc-cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Q 014492          278 LRTFSKRAGLAGLRVGY--GA-FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD  352 (423)
Q Consensus       278 i~S~SK~~g~~G~R~G~--i~-~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~  352 (423)
                      +.|+||.++.+|.++|.  ++ .++++++++......  ...++..+.++...++.   +....++..++.+++.+.|++
T Consensus       208 ~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~---l~~r~~~~~~~a~~l~~~L~~  284 (400)
T 3nmy_A          208 VHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT---LPLRMRAHCENALALAQWLET  284 (400)
T ss_dssp             EEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH---HHHHHHHHHHHHHHHHHHHHc
Confidence            99999999878878755  33 477888877655432  45677777666666644   455667778888999999988


Q ss_pred             CCCCe-e-cC----------------CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCC------------------
Q 014492          353 VPFLN-P-YP----------------SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNN------------------  395 (423)
Q Consensus       353 ~~~~~-~-~p----------------~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~------------------  395 (423)
                      .+.+. + +|                +.|.+++++++.+ .....+.+.|.-.++.+..|+.                  
T Consensus       285 ~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~  364 (400)
T 3nmy_A          285 HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVA  364 (400)
T ss_dssp             CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHH
T ss_pred             CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHH
Confidence            76543 2 23                2467899999632 1234455554433333332221                  


Q ss_pred             -----CCCCCeEEEEecChhhHHHHHHHHh
Q 014492          396 -----KELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       396 -----~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                           .-.++.+|||++.++. +++.+.|+
T Consensus       365 ~~~~~gi~~~liRlsvGle~~-~dli~dl~  393 (400)
T 3nmy_A          365 RREQLGISDALVRLSVGIEDL-GDLRGDLE  393 (400)
T ss_dssp             HHHHHTCCTTEEEEECCSSCH-HHHHHHHH
T ss_pred             HHHhcCCCcCeEEEEeCcCCH-HHHHHHHH
Confidence                 0135789999997653 55555444

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.93  E-value=3.3e-25  Score=218.16  Aligned_cols=265  Identities=14%  Similarity=0.119  Sum_probs=200.3

Q ss_pred             HHHHHHHhcC---------CCCCCCCCcchHHHHHHHHHHhCCCCCcEEE---eCCHHHHHHHHHHHhcCCCCeEEEcC-
Q 014492          111 PEVREALGQL---------KFPYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCP-  177 (423)
Q Consensus       111 ~~v~~al~~~---------~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~---t~G~~~al~~~~~~l~~~gd~Vl~~~-  177 (423)
                      +.|++++.+.         ..++.|++.+..+|++.+++++|.+.  .++   ++|+++++..++.++++|||+|++.+ 
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~  124 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICG  124 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSS
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            6777887653         12356778888899999999999643  344   77888999999999999999999998 


Q ss_pred             CCchhhHH-----------HHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-CCceEEEEcC----CCCCcCcCCCHHHHH
Q 014492          178 PTFTMYEF-----------DAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTS----PNNPDGSIINDEDLL  241 (423)
Q Consensus       178 p~y~~~~~-----------~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~~i~l~~----p~NPtG~~~~~~~l~  241 (423)
                      |.|..+..           .++..|++++.++. +++.+|++++++++++ +++|+|++++    |+||||.+.+.+++.
T Consensus       125 ~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~  203 (427)
T 3hvy_A          125 MPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEII  203 (427)
T ss_dssp             SCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHH
T ss_pred             CCchhHHHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHH
Confidence            99987763           34557999999998 6678999999999974 6899999998    999999999999999


Q ss_pred             HHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHhcCC--CC--
Q 014492          242 KILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YN--  313 (423)
Q Consensus       242 ~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~~--~~--  313 (423)
                      ++|+.   |+++++|++|..+.....+..    .+.+++++|+||.+|..| .+.||+++++++++++......  ..  
T Consensus       204 ~ia~~~~~g~~livD~a~~~~~~~~~p~~----~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~  279 (427)
T 3hvy_A          204 KSIREVNENVIVFVDNCYGEFVEEKEPTD----VGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGE  279 (427)
T ss_dssp             HHHHHHCSSSEEEEECTTCTTTSSSCGGG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGG
T ss_pred             HHHHHhCCCCEEEEECCccccccCCCCcc----cCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccc
Confidence            99986   999999999998764333322    234589999999988544 5569999999999999875422  11  


Q ss_pred             CcH-HH-HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCce-----EEEEEeCCCCCHHHHHHHHHhC
Q 014492          314 VSV-AA-EVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSN-----FILCEVTSGMDAKKLKDDLAKM  386 (423)
Q Consensus       314 ~~~-~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~l~~~L~~~  386 (423)
                      ..+ +. ...+...+   .....+.++..+++.++.+.|+++++ .+.|+.+.     .+.+.+.+......+++.|...
T Consensus       280 ~~~~~~~a~~~~~gl---~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~~~~~~~f~~~l~~~  355 (427)
T 3hvy_A          280 CGSTFGVMRSLYEGL---FMAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFNDEKKLIDFIKGIQTA  355 (427)
T ss_dssp             CCCCTTCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHhH---hHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence            111 11 22222222   34556777888899999999999886 55665444     6778885434456777888754

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.93  E-value=1.3e-25  Score=223.55  Aligned_cols=277  Identities=13%  Similarity=-0.005  Sum_probs=193.2

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCC-
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSD-  202 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~-  202 (423)
                      +++....++++.+++ +|.+ +++++|+|+++++..++.+++++||+|+++.|+|..+...+...|++++.++.  +++ 
T Consensus        54 ~~~~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~  131 (446)
T 2x3l_A           54 HPEEVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLT  131 (446)
T ss_dssp             SCSSHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTT
T ss_pred             CcchHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeecccc
Confidence            355567899999999 9976 78999999999999999999999999999999999999999999999999986  554 


Q ss_pred             ---CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEE
Q 014492          203 ---FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIV  277 (423)
Q Consensus       203 ---~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~  277 (423)
                         +.+|++++   +. .++++|++++ .|+||.+++.+++.++|+. |+++|+||+|.. +.+.+...... ..+..++
T Consensus       132 ~~~~~~d~~~l---~~-~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~-~~g~Di~  205 (446)
T 2x3l_A          132 NHYNKVNLSRL---NN-DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTL-NYQADYV  205 (446)
T ss_dssp             SSEEEEEC-----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGG-GGTCSEE
T ss_pred             CcCCCCCHHHH---cC-CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChH-HcCCCEE
Confidence               46788887   33 6799999999 4559999999999999987 999999999986 22222111111 1123489


Q ss_pred             EccChhhhcccCccccccccCHHHHH--HHHH---hcCCCCCcHHHHHHHHHHhCChHH--HHHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAGLRVGYGAFPLSIIE--YLWR---AKQPYNVSVAAEVAACAALQNPIY--LEKVKEALIKERERLFKLL  350 (423)
Q Consensus       278 i~S~SK~~g~~G~R~G~i~~~~~~~~--~l~~---~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L  350 (423)
                      +.|+||.++ ++.++||++++++.++  .+..   .....+.+.....++..+++..+.  .++..++.+++++++.+. 
T Consensus       206 ~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-  283 (446)
T 2x3l_A          206 VQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-  283 (446)
T ss_dssp             EECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-
T ss_pred             EECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-
Confidence            999999643 3445899998766543  3322   123345555544444333321110  112455555555666555 


Q ss_pred             ccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          351 KDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       351 ~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                         + +.+ .+..++++|+.++ +.+..++.+.|.++||.++..+    .+++|++++   +.++. ++.++|+++
T Consensus       284 ---g-~~~~~~~~~~~l~i~~~-~~~~~~l~~~L~~~GI~v~~~g----~~~iRi~~~~~~t~e~i-~l~~aL~~~  349 (446)
T 2x3l_A          284 ---G-FEMLQVDDPLKLLIKYE-GFTGHDIQNWFMNAHIYLELAD----DYQALAILPLWHHDDTY-LFDSLLRKI  349 (446)
T ss_dssp             ---T-CEEEECSSTTEEEEECT-TSCHHHHHHHHHHTTEEESEEC----SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred             ---C-CEECcCCCCeEEEEEeC-CcCHHHHHHHHHHCCCEEEecC----CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence               2 333 2344568999987 7788999999998899997322    378999987   45556 666666553

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.93  E-value=5.3e-25  Score=218.91  Aligned_cols=309  Identities=17%  Similarity=0.154  Sum_probs=206.8

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhc--C-CCCCCCC---Ccc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH-h
Q 014492           98 VKIDANENPYGPPPEVREALGQ--L-KFPYIYP---DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-V  166 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~Y~---~~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~-l  166 (423)
                      ..++.+..+...|+.+.+.+.+  . .....|.   ..|    ..++++.+++++|.+++++++++|++.+.+.+..+ .
T Consensus        67 ~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~  146 (438)
T 1wyu_A           67 AFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR  146 (438)
T ss_dssp             CCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH
T ss_pred             cccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh
Confidence            3556666666667766555422  1 1112231   122    45899999999999888899999999443333322 2


Q ss_pred             cCCCCeEEEcCCCchhhHHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          167 LDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       167 ~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      +++||+|+++.++|+.+...+    +..|++++.++. +++.+|+++    ++ +++++|++++| ||||.+.+.+++.+
T Consensus       147 ~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~-~~t~~v~i~~p-n~tG~~~~l~~i~~  219 (438)
T 1wyu_A          147 ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG-EEVGAVVVQNP-NFLGALEDLGPFAE  219 (438)
T ss_dssp             HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC-TTEEEEEEESS-CTTSBCCCHHHHHH
T ss_pred             cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hC-CCeEEEEEECC-CCCeEEecHHHHHH
Confidence            478999999999999887554    458999999997 445777766    54 68999999999 99999999999999


Q ss_pred             HHcC-CCEEEEccC---CccccCCCchhhhhccCCcEEEEccChhhhc----ccCccccccccCHHHHHHHH--------
Q 014492          243 ILEM-PILVVLDEA---YTEFSGLESRMEWVKKHDNLIVLRTFSKRAG----LAGLRVGYGAFPLSIIEYLW--------  306 (423)
Q Consensus       243 i~~~-~~~li~Dea---y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g----~~G~R~G~i~~~~~~~~~l~--------  306 (423)
                      +|+. |+++|+|..   +..+   ... .   ..+..+++.| +|.||    +.|.|+||+++++++++.+.        
T Consensus       220 la~~~g~~vivd~d~~a~g~~---~~~-~---~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~  291 (438)
T 1wyu_A          220 AAHGAGALFVAVADPLSLGVL---KPP-G---AYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETV  291 (438)
T ss_dssp             HHHHTTCEEEEECCTTGGGTB---CCH-H---HHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEE
T ss_pred             HHHHcCCEEEEEechhhccCc---CCC-c---cCCCCEEEEC-CcccCCCccCCCCCeeEEEEcHHHHHhCCCceecccc
Confidence            9987 999996632   3221   111 1   1222355555 55543    56778999999988765541        


Q ss_pred             --------------------HhcCCCCC---cHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC
Q 014492          307 --------------------RAKQPYNV---SVAAEVAACAALQ--NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS  361 (423)
Q Consensus       307 --------------------~~~~~~~~---~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~  361 (423)
                                          +....+++   +.....++..++.  ..+.+++..++++++++++.+.|++++++.+.+.
T Consensus       292 ~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~  371 (438)
T 1wyu_A          292 DVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTP  371 (438)
T ss_dssp             BTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSC
T ss_pred             ccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCC
Confidence                                11122232   2333222221122  2345788889999999999999999866666544


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEE--EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLAKMGVMI--RHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v--~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ...|.++.+..+.+..++.+.|.++||.+  +++..+. ++++||+++   +.++++++.++|+++
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~  436 (438)
T 1wyu_A          372 KPFFNEFALALPKDPEAVRRALAERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEV  436 (438)
T ss_dssp             SSBCSEEEEECSSCHHHHHHHHHHTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEeCCCCHHHHHHHHHHCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHH
Confidence            34443333322357899999999999998  5554322 689999998   666777777777654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.93  E-value=8.7e-25  Score=219.00  Aligned_cols=313  Identities=13%  Similarity=0.101  Sum_probs=199.5

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhc-CCCC-CCCC-CcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCC---
Q 014492           96 DIVKIDANENPYGPPPEVREALGQ-LKFP-YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP---  169 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~Y~-~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~---  169 (423)
                      .++|+..+...    +++.+++.+ +..+ ..|+ .++..+||++++++++.  +++++|+|+++++..++.+++++   
T Consensus        42 ~ylD~~~~~~~----~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~~~~~--~~v~~t~~gt~A~~~al~~~~~~~~~  115 (467)
T 2oqx_A           42 VFIDLLTDSGT----GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQ  115 (467)
T ss_dssp             CSEECSCCSSC----SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHHHHCC--SEEEEEC--CCSHHHHHHHHHHHHHH
T ss_pred             eeEecccCCCc----HHHHHHHHHHhccCcceeccCchhHHHHHHHHHHhCc--CcEEEcCCcHHHHHHHHHHHhccccc
Confidence            45676543322    555566554 2222 3564 45678999999999985  68999999999999999998888   


Q ss_pred             --C----CeEEEcCCCchhhHHHHHHCCCeEEEec------CC----CCCCCCHHHHHHHhhc---CCceEEEEcCCCCC
Q 014492          170 --G----DKIVDCPPTFTMYEFDAAVNGAAVVKVP------RK----SDFSLNVELIADAVER---EKPKCIFLTSPNNP  230 (423)
Q Consensus       170 --g----d~Vl~~~p~y~~~~~~~~~~g~~~~~v~------~~----~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NP  230 (423)
                        |    |.|++..+.|..+.......|+.++...      .+    .++.+|+++|++++++   .++++|++++|+||
T Consensus       116 ~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~  195 (467)
T 2oqx_A          116 EKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNS  195 (467)
T ss_dssp             HHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCG
T ss_pred             cCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccC
Confidence              8    9888774444555556666788776542      11    2356899999999974   37999999999999


Q ss_pred             c-CcCCCHHHHHHHHc---C-CCEEEEccCCcc----------ccCCCchhhhh-----ccCCcEEEEccChhhhccc-C
Q 014492          231 D-GSIINDEDLLKILE---M-PILVVLDEAYTE----------FSGLESRMEWV-----KKHDNLIVLRTFSKRAGLA-G  289 (423)
Q Consensus       231 t-G~~~~~~~l~~i~~---~-~~~li~Deay~~----------~~~~~~~~~~~-----~~~~~~i~i~S~SK~~g~~-G  289 (423)
                      | |.+++.+++++|++   . |++||+|+++..          ..+.+.....+     ...+  +++.|+||.+|++ |
T Consensus       196 ~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G  273 (467)
T 2oqx_A          196 AGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG  273 (467)
T ss_dssp             GGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc
Confidence            8 89999877666655   3 999999976543          11112111111     1223  4578999999876 5


Q ss_pred             ccccccccCHH----HHHHHHHhc---CC---C-CCcHHHHHHHHHHhCChHHH-HHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          290 LRVGYGAFPLS----IIEYLWRAK---QP---Y-NVSVAAEVAACAALQNPIYL-EKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       290 ~R~G~i~~~~~----~~~~l~~~~---~~---~-~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                         ||++++++    .+..+....   ..   + ..+.....++...+.  +++ ++..++.+++++++.+.|++++...
T Consensus       274 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  348 (467)
T 2oqx_A          274 ---GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY--DGMNLDWLAYRIAQVQYLVDGLEEIGVVC  348 (467)
T ss_dssp             ---EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred             ---eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhH--hhhhHHHHHHHHHHHHHHHHHHHHCCCee
Confidence               78887765    334433321   11   1 223333322222221  122 1234445677888888888774333


Q ss_pred             ecCCCceEEEEEeCC---CCC-----HHHHHHHH-HhCCcEEEeCCC---C----------CCCCeEEEEecCh-hhHHH
Q 014492          358 PYPSYSNFILCEVTS---GMD-----AKKLKDDL-AKMGVMIRHYNN---K----------ELKGYVRVSVGKP-EHTDA  414 (423)
Q Consensus       358 ~~p~~~~~~~~~~~~---~~~-----~~~l~~~L-~~~gI~v~~~~~---~----------~~~~~iRis~~~~-~~~~~  414 (423)
                      . |.+++++|+++++   +.+     ...+.+.| .++||.+.+++.   .          ...+++||+++.. .+.++
T Consensus       349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~  427 (467)
T 2oqx_A          349 Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTH  427 (467)
T ss_dssp             E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHH
T ss_pred             e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHH
Confidence            4 6778899998841   333     45568888 789999987442   0          1247999999743 33355


Q ss_pred             HHHHHhhh
Q 014492          415 LMECLMHL  422 (423)
Q Consensus       415 l~~al~~l  422 (423)
                      +.+++++|
T Consensus       428 i~~~~~~l  435 (467)
T 2oqx_A          428 MDFIIEAF  435 (467)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55555543

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.93  E-value=5.2e-23  Score=201.28  Aligned_cols=299  Identities=16%  Similarity=0.131  Sum_probs=210.8

Q ss_pred             CCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-------cCCCCeEEEcCCCc
Q 014492          109 PPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-------LDPGDKIVDCPPTF  180 (423)
Q Consensus       109 ~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-------~~~gd~Vl~~~p~y  180 (423)
                      .++++.+++.+. .....++.++..++|+++++++|.+  ++++++++++++..++.++       +++||+|+++.|+|
T Consensus        13 ~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~   90 (390)
T 3b8x_A           13 WDDLEYKAIQSVLDSKMFTMGEYVKQYETQFAKTFGSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSW   90 (390)
T ss_dssp             CCHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSC
T ss_pred             CCHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHCCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCc
Confidence            357788887663 2223346667899999999999975  5666666678999999988       78999999999999


Q ss_pred             hhhHHHHHHCCCeEEEecCCCC-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492          181 TMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (423)
Q Consensus       181 ~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~  258 (423)
                      ..+...++..|++++.++.+++ +.+|++++++.++ +++++|+++|   ++|...+.+++.++|+. |+++|+|++|..
T Consensus        91 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~  166 (390)
T 3b8x_A           91 STTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVT-DSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESM  166 (390)
T ss_dssp             HHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCC-TTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCT
T ss_pred             HHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhC-cCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcc
Confidence            9999999999999999997654 8899999999997 5899999874   67888999999999998 999999999985


Q ss_pred             cc-CCCchhhhhccCCcEEEEc--cChhhhcccCccccccccCH-HHHHHHHHhcC------------------------
Q 014492          259 FS-GLESRMEWVKKHDNLIVLR--TFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQ------------------------  310 (423)
Q Consensus       259 ~~-~~~~~~~~~~~~~~~i~i~--S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~------------------------  310 (423)
                      +. +...   ..+... ++...  ..+|.++ +| +.|++++++ ++.+++.....                        
T Consensus       167 g~~~~~~---~~g~~~-~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  240 (390)
T 3b8x_A          167 GATFNNK---CAGTFG-LMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEE  240 (390)
T ss_dssp             TCEETTE---ETTSSS-SEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTS
T ss_pred             cCEECCc---cccccc-ceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCcccccccccccccccccccc
Confidence            43 2111   111111 12222  2345543 33 348998875 66665554321                        


Q ss_pred             -------CC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--CceE--EEEEeCC--CCC
Q 014492          311 -------PY--NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSNF--ILCEVTS--GMD  375 (423)
Q Consensus       311 -------~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~~--~~~~~~~--~~~  375 (423)
                             .+  ..+.+...++...+   +++++..++.+++++++.+.|++++++.+.+.  .+.+  +++.++.  +.+
T Consensus       241 ~~~~~~~g~~~~~~~~~aa~~l~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  317 (390)
T 3b8x_A          241 SFKFVLPGYNVRPLEMSGAIGIEQL---KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVI  317 (390)
T ss_dssp             SSCBCSCCCBCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCC
T ss_pred             ccceeccccccCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCccc
Confidence                   01  14555555554444   56778888899999999999998866655432  3333  5566653  567


Q ss_pred             HHHHHHHHHhCCcEEEeCCC-----C-C---------C----------CCeEEEEecChhhHHHHHHHHhhh
Q 014492          376 AKKLKDDLAKMGVMIRHYNN-----K-E---------L----------KGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       376 ~~~l~~~L~~~gI~v~~~~~-----~-~---------~----------~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .+++.+.|.++||.++....     . +         .          .+.|||++....+.++++..++.|
T Consensus       318 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          318 RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence            89999999999999986311     1 0         0          025999987544445566555554

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.93  E-value=1.8e-24  Score=213.92  Aligned_cols=279  Identities=17%  Similarity=0.163  Sum_probs=194.9

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHH----HHCCCeEEEe-cCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKV-PRK  200 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~v-~~~  200 (423)
                      |+++...++++++++++|.+ +.|++++ +++++..++..++++||+|+++.++|..+...+    +..|++++.+ +.+
T Consensus        55 ~~~~~~~~l~~~la~~~g~~-~~v~~~s-Gt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  132 (421)
T 2ctz_A           55 IMNPTVDVLEKRLAALEGGK-AALATAS-GHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE  132 (421)
T ss_dssp             TBCHHHHHHHHHHHHHHTCS-EEEEESS-HHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC
T ss_pred             CCChHHHHHHHHHHHHhCCC-ceEEecC-HHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC
Confidence            34445689999999999965 4555555 589999999988999999999999998766654    6789999999 743


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC-ccccCCCchhhhhccCCcEEEE
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay-~~~~~~~~~~~~~~~~~~~i~i  278 (423)
                           |++++++.++ +++++|++++|+||||.+.+.+++.++|+. |+++|+|++| ... ......    ..+.++++
T Consensus       133 -----d~~~l~~~i~-~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g-~~~~~~----~~~~Di~~  201 (421)
T 2ctz_A          133 -----RPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGG-YLLRPL----AWGAALVT  201 (421)
T ss_dssp             -----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGG-TSCCGG----GGTCSEEE
T ss_pred             -----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccc-ccCCcc----ccCCeEEE
Confidence                 7999999997 689999999999999999999999999998 9999999999 533 222222    12345899


Q ss_pred             ccChhhhcccCccccccccC---HHH----HHHHHHh---------------------------c-CCCCCcHHHHHHHH
Q 014492          279 RTFSKRAGLAGLRVGYGAFP---LSI----IEYLWRA---------------------------K-QPYNVSVAAEVAAC  323 (423)
Q Consensus       279 ~S~SK~~g~~G~R~G~i~~~---~~~----~~~l~~~---------------------------~-~~~~~~~~~~~a~~  323 (423)
                      .|++|.++.+|.|+|++++.   +++    .+.+...                           . ....+++....++.
T Consensus       202 ~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~  281 (421)
T 2ctz_A          202 HSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVL  281 (421)
T ss_dssp             EETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHH
T ss_pred             ECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            99999999899999988773   111    1122110                           0 01244555555555


Q ss_pred             HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee--cC-----------------CCceEEEEEeCCC-CCHHHHHHHH
Q 014492          324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP--YP-----------------SYSNFILCEVTSG-MDAKKLKDDL  383 (423)
Q Consensus       324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p-----------------~~~~~~~~~~~~~-~~~~~l~~~L  383 (423)
                      ..++.   +....++..++.+++.+.|++++.+..  +|                 ..+..+.+.+.+. .+...+.+.|
T Consensus       282 ~~l~~---l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l  358 (421)
T 2ctz_A          282 LGMET---LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRL  358 (421)
T ss_dssp             HHHTT---HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTC
T ss_pred             cCcch---HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhC
Confidence            55543   445556666889999999998876653  22                 3466788888631 1223333433


Q ss_pred             HhCCcEEEeCCC-----------------------CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          384 AKMGVMIRHYNN-----------------------KELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       384 ~~~gI~v~~~~~-----------------------~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      ...++.++.|+.                       ...++.||+|++.++ .+++.+.|++
T Consensus       359 ~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~e~-~~~li~~l~~  418 (421)
T 2ctz_A          359 KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEH-VEDLKAELKE  418 (421)
T ss_dssp             SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSC-HHHHHHHHHH
T ss_pred             CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCCCC-HHHHHHHHHH
Confidence            333434433311                       011489999999764 5777777764

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.93  E-value=4.9e-24  Score=215.71  Aligned_cols=287  Identities=12%  Similarity=0.056  Sum_probs=207.3

Q ss_pred             HHHHHHHHHhCCC--CCcEEEeCCHHHHHHHHHHHhcC--------CC-----C-eEEEcCCCchhhHHHHHHCCC---e
Q 014492          133 RLRAALAKDSGLE--SDHILVGCGADELIDLIMRCVLD--------PG-----D-KIVDCPPTFTMYEFDAAVNGA---A  193 (423)
Q Consensus       133 ~lr~~ia~~~g~~--~~~i~~t~G~~~al~~~~~~l~~--------~g-----d-~Vl~~~p~y~~~~~~~~~~g~---~  193 (423)
                      ++++.+++++|++  ++++++|+|+++++..++.++..        +|     + .|+++.+.|..+...++..|.   +
T Consensus       136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~  215 (504)
T 2okj_A          136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDN  215 (504)
T ss_dssp             HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCccc
Confidence            4556678888987  78999999999999999887743        56     6 788999999999999988877   8


Q ss_pred             EEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-Cchh
Q 014492          194 VVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRM  266 (423)
Q Consensus       194 ~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-~~~~  266 (423)
                      ++.+|.++++.+|+++|++++.+.     ++++|++++|+||||.+.+.++|.++|+. |+++++|++|..+... +...
T Consensus       216 v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~  295 (504)
T 2okj_A          216 VILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR  295 (504)
T ss_dssp             EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred             EEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhH
Confidence            999998778899999999999642     58999999999999999999999999998 9999999999876532 1111


Q ss_pred             hhhc-cCCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCCC-----------------------CcHHHHHH
Q 014492          267 EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPYN-----------------------VSVAAEVA  321 (423)
Q Consensus       267 ~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~~-----------------------~~~~~~~a  321 (423)
                      ..+. .....+++.+++|.++.| .++|+++.++ ++++........|-                       ...+.+.+
T Consensus       296 ~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a  374 (504)
T 2okj_A          296 HKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWL  374 (504)
T ss_dssp             GGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHH
T ss_pred             hhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHH
Confidence            1111 112236778899987744 6899999865 46554332211110                       13556666


Q ss_pred             HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec----CCCceEEEEEeCCCC---------------CHHHHHHH
Q 014492          322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY----PSYSNFILCEVTSGM---------------DAKKLKDD  382 (423)
Q Consensus       322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~----p~~~~~~~~~~~~~~---------------~~~~l~~~  382 (423)
                      +..++. .+.+++..++..++++++.+.|++++++.+.    |..+++++...+...               ...++.+.
T Consensus       375 ~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  453 (504)
T 2okj_A          375 MWKAKG-TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKAL  453 (504)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHH
T ss_pred             HHHHhh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHH
Confidence            666665 4567888889999999999999998666653    445555554444210               13568888


Q ss_pred             HHhCCcEE-EeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          383 LAKMGVMI-RHYNNKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       383 L~~~gI~v-~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      |.++|+.+ .+....+..+++||+++    +.++++++.++|++
T Consensus       454 L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~  497 (504)
T 2okj_A          454 MMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIER  497 (504)
T ss_dssp             HHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            88888644 33221222368999996    55566666666654

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.92  E-value=1.3e-23  Score=204.86  Aligned_cols=281  Identities=11%  Similarity=0.062  Sum_probs=198.3

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH--HHHHHCC--CeEEEecCCC-----
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE--FDAAVNG--AAVVKVPRKS-----  201 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g--~~~~~v~~~~-----  201 (423)
                      ..++++.+++++|.+ +.|++|+|++++++.++. ++.+||+|++..+.|..+.  ..++..|  .+++.++.+.     
T Consensus        37 ~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~  114 (379)
T 3ke3_A           37 MNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTE  114 (379)
T ss_dssp             HHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCS
T ss_pred             HHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccccc
Confidence            457888999999986 789999999999999886 4579999999999997543  3445555  4777777532     


Q ss_pred             ---C-CCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC---HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCC
Q 014492          202 ---D-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN---DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHD  273 (423)
Q Consensus       202 ---~-~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~---~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~  273 (423)
                         . ..+|++++++.+.+.++++|++++++||||.+++   .+++.++|+. |+++|+|+++. ... +..   +...+
T Consensus       115 ~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~-~~~---~~~~~  189 (379)
T 3ke3_A          115 APKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCV-WLD---MKELG  189 (379)
T ss_dssp             SCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTC-CCC---HHHHT
T ss_pred             ccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCc-ccc---ccccC
Confidence               1 2589999999996458999999999999999999   6666677765 99999999987 321 111   11223


Q ss_pred             cEEEEccChhhhcccCccccccccCHHHHHHHHHhc----------------------CC--CCCcHHHHHHHHHHhCCh
Q 014492          274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----------------------QP--YNVSVAAEVAACAALQNP  329 (423)
Q Consensus       274 ~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~----------------------~~--~~~~~~~~~a~~~~l~~~  329 (423)
                      ..+++.|++|.++ .+.++|++++++++++.+....                      ..  ++.+...+.++.++|+..
T Consensus       190 ~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~  268 (379)
T 3ke3_A          190 IDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA  268 (379)
T ss_dssp             CSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred             CCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence            4588899999876 3345899999999988776411                      11  266777777777777532


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC--CceEEE-EEeCCCCCHHHHHHHHHhCCcEEEeCCCC-----CCC
Q 014492          330 --IYLEKVKEALIKERERLFKLLKDVPFLNPYPS--YSNFIL-CEVTSGMDAKKLKDDLAKMGVMIRHYNNK-----ELK  399 (423)
Q Consensus       330 --~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~--~~~~~~-~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-----~~~  399 (423)
                        +.+++.+++++++++++.+.|+++++....+.  .+..+. +..+ + ....+.+.|.++||.+.++..+     ...
T Consensus       269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~-~-~~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~  346 (379)
T 3ke3_A          269 KEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTE-R-DDMHKGSAFAEAGLQIAAGVPLKVGEPDNF  346 (379)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECS-C-HHHHSSHHHHHTTCCCEECCCCSSCCCTTC
T ss_pred             HHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccC-C-cchHHHHHHHHCCeEEeCCccccccccCcC
Confidence              22578888899999999999998864332222  133333 3332 2 1222367788999999987642     236


Q ss_pred             CeEEEEecC---hhhHHHHHHHHhh
Q 014492          400 GYVRVSVGK---PEHTDALMECLMH  421 (423)
Q Consensus       400 ~~iRis~~~---~~~~~~l~~al~~  421 (423)
                      +.+||++..   .++++++.++|++
T Consensus       347 ~~lRis~~~~~t~~di~~~~~~l~~  371 (379)
T 3ke3_A          347 KTFRLGLFGLDKLTDIDGTVERFEK  371 (379)
T ss_dssp             CEEEEECCSHHHHTCHHHHHHHHHH
T ss_pred             CEEEEeCCcCCCHHHHHHHHHHHHH
Confidence            899999863   4455555555543

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.92  E-value=2.4e-23  Score=208.04  Aligned_cols=317  Identities=13%  Similarity=0.110  Sum_probs=206.4

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-C--CCCCCCCc----c---hHHHH----HHHHHHhCCCCCc---EEEeCCHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP----E---SRRLR----AALAKDSGLESDH---ILVGCGADEL  158 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Y~~~----g---~~~lr----~~ia~~~g~~~~~---i~~t~G~~~a  158 (423)
                      +.|.|-.++|.  .+|.|++++... .  +..+||..    |   ..+++    +.+++++|.+.+.   .++++|++++
T Consensus        55 ~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~A  132 (490)
T 2a7v_A           55 RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA  132 (490)
T ss_dssp             HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred             cCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHH
Confidence            34777776665  479999999873 2  22344421    1   12455    8899999987753   3455577889


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHH--------HHHHCCCeE--EEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEF--------DAAVNGAAV--VKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      +..++.++++|||+|++.++.|..+..        .+...|..+  +.++.+ +++.+|++++++.+.+.++|+|+++++
T Consensus       133 n~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s  212 (490)
T 2a7v_A          133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS  212 (490)
T ss_dssp             HHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCC
Confidence            999999999999999999998864321        223455543  444443 467899999999997567899998888


Q ss_pred             CCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc-ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHH-----
Q 014492          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-----  300 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-----  300 (423)
                      +||  ...+.+++.+||+. |+++++|++|.. +...+.....+.  ...+++.|+||.+  .|.|.|+++++++     
T Consensus       213 ~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~  286 (490)
T 2a7v_A          213 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTL--RGARSGLIFYRKGVKAVD  286 (490)
T ss_dssp             SCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSGGG--CSCSCEEEEEECSEEEEE
T ss_pred             CCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CCCEEEECCcccC--ccccchheeeccchhccc
Confidence            987  46789999999987 999999999752 221111111111  2348889999987  4677899998763     


Q ss_pred             ----------HHHHHHHhcCCC---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCc
Q 014492          301 ----------IIEYLWRAKQPY---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYS  363 (423)
Q Consensus       301 ----------~~~~l~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~  363 (423)
                                +.+++.+...++   +++.....++..++..  .+.+++..+++.++++++.+.|.+.+ +.+.  +...
T Consensus       287 ~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G-~~v~~~~t~t  365 (490)
T 2a7v_A          287 PKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERG-YSLVSGGTDN  365 (490)
T ss_dssp             TTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSS
T ss_pred             ccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcC-cEEecCCCCC
Confidence                      456666554432   3444444444444433  12347788889999999999999876 4443  2456


Q ss_pred             eEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC-----CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          364 NFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN-----KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       364 ~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~-----~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      +++|+++.+ +.+..++.+.|.++||.+..+..     +..++.|||+..       .+++.+++.++|.+
T Consensus       366 ~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~  436 (490)
T 2a7v_A          366 HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE  436 (490)
T ss_dssp             SEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHH
Confidence            788999863 56888899999999999985322     234678999752       35667777777654

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.91  E-value=1e-23  Score=211.46  Aligned_cols=320  Identities=13%  Similarity=0.062  Sum_probs=203.9

Q ss_pred             CCCCCCeeEcCCCCC--CCC-CCHHHHHHHhcCC------CCCCCCCcchHHHHHHHHH----HhCCCCCcEEEeCCHHH
Q 014492           91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQLK------FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE  157 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~~~------~~~~Y~~~g~~~lr~~ia~----~~g~~~~~i~~t~G~~~  157 (423)
                      ..+++.+|||..|..  .++ .+|++.+|+.+..      +...|+.....++++++++    +++...++|++++|+++
T Consensus        59 d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse  138 (472)
T 1ohv_A           59 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSC  138 (472)
T ss_dssp             BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             eCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence            345778999987743  355 4899999997631      2223443334567777665    44446789999999999


Q ss_pred             HHHHHHHHhc--------C-----------------CC---CeEEEcCCCchhhHHHHH-HCCCe-------------EE
Q 014492          158 LIDLIMRCVL--------D-----------------PG---DKIVDCPPTFTMYEFDAA-VNGAA-------------VV  195 (423)
Q Consensus       158 al~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~-~~g~~-------------~~  195 (423)
                      |+..+++.+.        .                 ||   +.|++.++.|+.+...+. ..|..             .+
T Consensus       139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~  218 (472)
T 1ohv_A          139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  218 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred             HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence            9999998763        1                 45   899999999986655442 33321             11


Q ss_pred             EecCCC-----C--C-----CCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEc
Q 014492          196 KVPRKS-----D--F-----SLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLD  253 (423)
Q Consensus       196 ~v~~~~-----~--~-----~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~D  253 (423)
                      .+|...     .  +     ..|+++|++.+++.     ++++|++++.+|++|.+.+    ++++.++|+. |+++|+|
T Consensus       219 ~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D  298 (472)
T 1ohv_A          219 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD  298 (472)
T ss_dssp             CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEe
Confidence            232100     0  0     12688999988641     7888888877889998765    5666666665 9999999


Q ss_pred             cCCccccCCCch--hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhCCh
Q 014492          254 EAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQNP  329 (423)
Q Consensus       254 eay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~  329 (423)
                      |+|..|...+..  ....+.. ..+-+.||||.+ +.|   ||++ ++++. .+...  ...++.+++++.++.++|+..
T Consensus       299 Ev~~g~g~~g~~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aal~~~  371 (472)
T 1ohv_A          299 EVQTGGGSTGKFWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEVINII  371 (472)
T ss_dssp             CTTTTTTTTSSSSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred             CcccCCCCCCCchhccccCCC-CCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHHHHHH
Confidence            999876654321  1111111 002234889985 445   7766 55542 11111  123567889998888888532


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccC----CC-CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014492          330 IYLEKVKEALIKERERLFKLLKDV----PF-LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV  404 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi  404 (423)
                      .- +...++++++++++.+.|+++    +. +...++.|.|+++++++..+...+++.|.++||.+.+++    .++|||
T Consensus       372 ~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~~iRi  446 (472)
T 1ohv_A          372 KR-EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG----DKSIRF  446 (472)
T ss_dssp             HH-TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEE
T ss_pred             Hh-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCC----CCEEEE
Confidence            11 245667777777777777654    32 332334577888888633346788999999999999864    579999


Q ss_pred             EecChhhHHHHHHHHhhh
Q 014492          405 SVGKPEHTDALMECLMHL  422 (423)
Q Consensus       405 s~~~~~~~~~l~~al~~l  422 (423)
                      +++...+.+++.+++++|
T Consensus       447 ~~~~~~t~e~i~~~~~~l  464 (472)
T 1ohv_A          447 RPTLVFRDHHAHLFLNIF  464 (472)
T ss_dssp             CCCTTCCHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHHHHHHH
Confidence            876433334455544443

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.91  E-value=3.2e-23  Score=209.34  Aligned_cols=286  Identities=13%  Similarity=0.115  Sum_probs=202.2

Q ss_pred             HHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHh----c---------CC------CC-eEEEcCCCchhhHHHHHHCC
Q 014492          133 RLRAALAKDSGLES-DHILVGCGADELIDLIMRCV----L---------DP------GD-KIVDCPPTFTMYEFDAAVNG  191 (423)
Q Consensus       133 ~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l----~---------~~------gd-~Vl~~~p~y~~~~~~~~~~g  191 (423)
                      ++++.+++++|.++ +++++|+|+++++..++.+.    +         .+      |+ .|+++.+.|..+...++..|
T Consensus       144 ~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g  223 (497)
T 2qma_A          144 KVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMG  223 (497)
T ss_dssp             HHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTT
T ss_pred             HHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcC
Confidence            34666888899865 79999999999999988863    3         12      45 78899999999998888887


Q ss_pred             C---eEEEecCCCCCCCCHHHHHHHhhcC---Cce--EEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC
Q 014492          192 A---AVVKVPRKSDFSLNVELIADAVERE---KPK--CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL  262 (423)
Q Consensus       192 ~---~~~~v~~~~~~~~d~~~l~~~i~~~---~~~--~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~  262 (423)
                      .   +++.+|.++++.+|+++|++.+.+.   +++  +|++++++||||.+.+.++|.++|+. |+++++|++|..+...
T Consensus       224 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~  303 (497)
T 2qma_A          224 LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALIL  303 (497)
T ss_dssp             SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred             CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHh
Confidence            6   8999998888899999999998642   234  88888999999999999999999998 9999999999876542


Q ss_pred             Cchhhhhcc-CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCCC--C-----C-------------cHHHHH
Q 014492          263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY--N-----V-------------SVAAEV  320 (423)
Q Consensus       263 ~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~~--~-----~-------------~~~~~~  320 (423)
                      ......+.. ....+++.|++|.++.+ .++|+++.++ ..++.+.. ...|  .     .             ..+.+.
T Consensus       304 ~~~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~  381 (497)
T 2qma_A          304 SSHKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLH-HADYLNREHDELPNLVDKSIATTKRFDALKVF  381 (497)
T ss_dssp             STTGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHH
T ss_pred             CcchHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcC-CchhcCCccccCCCccccCCCCCCchhHHHHH
Confidence            221111111 12236778899987744 6899988754 33332211 0001  0     0             122334


Q ss_pred             HHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCC-CC----HHHHHHHHHhCCcEEEeCC
Q 014492          321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSG-MD----AKKLKDDLAKMGVMIRHYN  394 (423)
Q Consensus       321 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~-~~----~~~l~~~L~~~gI~v~~~~  394 (423)
                      ++...+. .+++++..++..++++++.+.|++++.+.+ .+..++++++++.+. .+    ..++.+.|.++|+.+.++.
T Consensus       382 ~~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~  460 (497)
T 2qma_A          382 MTMQNVG-PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGET  460 (497)
T ss_dssp             HHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEE
T ss_pred             HHHHHhC-HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEee
Confidence            4444443 456788889999999999999999866665 456677888888532 12    2456677888899886544


Q ss_pred             CCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          395 NKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       395 ~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      ...+.+++||+++    +.++++++.++|++
T Consensus       461 ~~~g~~~lRis~~~~~~t~edi~~~~~~l~~  491 (497)
T 2qma_A          461 IVDGKTALKFTILNPCLTTSDFESLLSKINM  491 (497)
T ss_dssp             EETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             EECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            3334579999983    45556666655554

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.91  E-value=2.6e-22  Score=203.12  Aligned_cols=307  Identities=13%  Similarity=0.061  Sum_probs=211.0

Q ss_pred             HHHHhc-CC-CCCCC-CCcchHHHHHHH----HHHhCCC--CCcEEEeCCHHHHHHHHHHHhcC--------------CC
Q 014492          114 REALGQ-LK-FPYIY-PDPESRRLRAAL----AKDSGLE--SDHILVGCGADELIDLIMRCVLD--------------PG  170 (423)
Q Consensus       114 ~~al~~-~~-~~~~Y-~~~g~~~lr~~i----a~~~g~~--~~~i~~t~G~~~al~~~~~~l~~--------------~g  170 (423)
                      .+.+.. ++ ....| ..++..++++.+    ++++|.+  ++.+++|+|+++++..++.++.+              ++
T Consensus       113 ~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~  192 (511)
T 3vp6_A          113 GEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK  192 (511)
T ss_dssp             HHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCC
T ss_pred             HHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCC
Confidence            355544 22 22455 345555666655    5556876  46899999999999888876654              56


Q ss_pred             CeEEEcCCCchhhHHHHHHCCC---eEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          171 DKIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      +.|+++.++|..+...++..|+   +++.+|.+.++.+|+++|++++.+.     ++++|++++|+||||.+-++++|.+
T Consensus       193 ~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~  272 (511)
T 3vp6_A          193 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIAD  272 (511)
T ss_dssp             EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHH
T ss_pred             eEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHH
Confidence            7899999999999999999998   9999998888899999999999642     1889999999999999999999999


Q ss_pred             HHcC-CCEEEEccCCccccCC-Cchhhhhc-cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC------
Q 014492          243 ILEM-PILVVLDEAYTEFSGL-ESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY------  312 (423)
Q Consensus       243 i~~~-~~~li~Deay~~~~~~-~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~------  312 (423)
                      ||+. |+++++|++|+.+... +.....+. .....+++.+++|.++.+ ..+|+++.+ ++.++........|      
T Consensus       273 ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~  351 (511)
T 3vp6_A          273 ICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDK  351 (511)
T ss_dssp             HHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSC
T ss_pred             HHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCccc
Confidence            9988 9999999999865431 11111111 112246677999988744 567877774 44555543221111      


Q ss_pred             -----------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC---CCceEEEEEe-C
Q 014492          313 -----------------NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEV-T  371 (423)
Q Consensus       313 -----------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~~~~~~~-~  371 (423)
                                       ....+...++..++ ..++++++.++..++.+++.+.|++++++.+..   ...+.+.+++ |
T Consensus       352 ~~~~~~~~~~~~~~~~r~~~al~~~~al~~~-g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p  430 (511)
T 3vp6_A          352 HYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK-GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIP  430 (511)
T ss_dssp             SSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECC
T ss_pred             ccccccCccCCCCCCCCchHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeC
Confidence                             01234444444444 246788999999999999999999987666532   3444455544 3


Q ss_pred             CCCC---------------HHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492          372 SGMD---------------AKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMHL  422 (423)
Q Consensus       372 ~~~~---------------~~~l~~~L~~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~l  422 (423)
                      .+.+               ..++.+.|.++|+.+..... ....+++||+++    +.++++.+.++|+++
T Consensus       431 ~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~  501 (511)
T 3vp6_A          431 QSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERL  501 (511)
T ss_dssp             GGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHH
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            2221               34688888888876554222 223458999984    455666666666654

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.91  E-value=5.6e-23  Score=207.03  Aligned_cols=305  Identities=11%  Similarity=0.018  Sum_probs=205.7

Q ss_pred             HHHHHHhcC-C-CCCCC-CCcchHHHHHH----HHHHhCCCC---------CcEEEeCCHHHHHHHHHHHhcCC------
Q 014492          112 EVREALGQL-K-FPYIY-PDPESRRLRAA----LAKDSGLES---------DHILVGCGADELIDLIMRCVLDP------  169 (423)
Q Consensus       112 ~v~~al~~~-~-~~~~Y-~~~g~~~lr~~----ia~~~g~~~---------~~i~~t~G~~~al~~~~~~l~~~------  169 (423)
                      .+.+++... + ....| ..++..++++.    +++++|.+.         ..+++|+|+++++..++.++..+      
T Consensus        89 ~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~  168 (486)
T 1js3_A           89 MLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQ  168 (486)
T ss_dssp             HHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhh
Confidence            355666553 2 22345 33444455544    566678764         36899999999998888765321      


Q ss_pred             ---CC--------e--EEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCc------eEEEEcCCCCC
Q 014492          170 ---GD--------K--IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP------KCIFLTSPNNP  230 (423)
Q Consensus       170 ---gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~------~~i~l~~p~NP  230 (423)
                         ||        .  |+++.++|..+...++..|++++.+|.++++.+|+++|++++.+ ++      .+|++++|+||
T Consensus       169 ~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~~~~~n~  247 (486)
T 1js3_A          169 AASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALER-DKAAGLIPFFVVATLGTTS  247 (486)
T ss_dssp             HHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHH-HHHTTCEEEEEEEEBSCTT
T ss_pred             ccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHH-HHhCCCCceEEEEeCCCCC
Confidence               32        3  77899999999999999999999999888889999999999963 33      48888999999


Q ss_pred             cCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-Cchh---hhhccCCcEEEEccChhhhcccCccccccccCHH-H-HH
Q 014492          231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-I-IE  303 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-~~~~---~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~-~~  303 (423)
                      ||.+-+.++|.++|+. |+++++|++|+.+... +...   ..+...  ..++.+++|.++.+ +++|+++.++. . .+
T Consensus       248 tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~a--dsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~  324 (486)
T 1js3_A          248 CCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA--DSFNFNPHKWLLVN-FDCSAMWVKRRTDLTG  324 (486)
T ss_dssp             TCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC--SEEEECHHHHSSCC-SSCEEEEESCHHHHHG
T ss_pred             CCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcccc--CeeEEchhhhcCCC-cceEEEEEeCHHHHHH
Confidence            9999999999999987 9999999999875421 1111   111112  24557889987754 88999998643 2 23


Q ss_pred             HHH-------HhcC-----C----C------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C
Q 014492          304 YLW-------RAKQ-----P----Y------NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-P  360 (423)
Q Consensus       304 ~l~-------~~~~-----~----~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p  360 (423)
                      .+.       ....     .    +      ....+.+.++...+. .+++++..++..++++++.+.|++++++.+. +
T Consensus       325 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  403 (486)
T 1js3_A          325 AFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE  403 (486)
T ss_dssp             GGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSC
T ss_pred             HhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence            221       0000     0    0      123455555555542 3568888999999999999999998766653 3


Q ss_pred             CCceEEEEEeCCC-CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014492          361 SYSNFILCEVTSG-MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH  421 (423)
Q Consensus       361 ~~~~~~~~~~~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~  421 (423)
                      ...+++.+++++. ....++.+.|.++|+.+..+......+++|++++.    .++++++.+.|++
T Consensus       404 ~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~  469 (486)
T 1js3_A          404 VTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRG  469 (486)
T ss_dssp             CCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            4556666677521 12477888888778654332222346799999753    3345555555543

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.90  E-value=9.8e-23  Score=212.39  Aligned_cols=288  Identities=12%  Similarity=0.109  Sum_probs=200.5

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHH-HHHCCCeEEEecCCC-CCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRKS-DFS  204 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~v~~~~-~~~  204 (423)
                      ++....++++.+|+++|.+ ..+++++|+++++..++.+++++||.|+++.|+|.++... ++..|++++.++.+. +++
T Consensus       171 ~~~~i~e~e~~lA~~~gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~  249 (730)
T 1c4k_A          171 HEGPAVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG  249 (730)
T ss_dssp             TBTHHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred             ChHHHHHHHHHHHHHHCCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccC
Confidence            3344689999999999976 4588999999999999999999999999999999988777 788999999887532 333


Q ss_pred             ----CCHHHH-----HHHhhcCC-----c----eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCCCc
Q 014492          205 ----LNVELI-----ADAVEREK-----P----KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLES  264 (423)
Q Consensus       205 ----~d~~~l-----~~~i~~~~-----~----~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~~~  264 (423)
                          +|+++|     ++++.+.+     +    |++++++| ||+|.+.+.+++.++|+. +++|++||+|..+ .+.+.
T Consensus       250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~  328 (730)
T 1c4k_A          250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM  328 (730)
T ss_dssp             CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred             ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcc
Confidence                688888     88886421     4    89999999 589999999999999998 9999999999753 23221


Q ss_pred             -----hhhh--hc-cCCcEEEEccChhhhcccCcccc-ccccC------------HHHHHHHHHhcCCCCCcHHHHHHHH
Q 014492          265 -----RMEW--VK-KHDNLIVLRTFSKRAGLAGLRVG-YGAFP------------LSIIEYLWRAKQPYNVSVAAEVAAC  323 (423)
Q Consensus       265 -----~~~~--~~-~~~~~i~i~S~SK~~g~~G~R~G-~i~~~------------~~~~~~l~~~~~~~~~~~~~~~a~~  323 (423)
                           ....  .. +.++++++.|+||.+  +|.+.| +++.+            ...+..........+++.....+..
T Consensus       329 ~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~  406 (730)
T 1c4k_A          329 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALD  406 (730)
T ss_dssp             GGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred             cCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHH
Confidence                 1111  01 234679999999974  576655 44221            1122222222334455655544444


Q ss_pred             HHhCC--hHHHHHHHHHHHHHHHHHHHHHcc-CCCCeecCC--------------------------------------C
Q 014492          324 AALQN--PIYLEKVKEALIKERERLFKLLKD-VPFLNPYPS--------------------------------------Y  362 (423)
Q Consensus       324 ~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~p~--------------------------------------~  362 (423)
                      .++..  .+...+..+++.++.+++++.|++ ++++.+..+                                      .
T Consensus       407 aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  486 (730)
T 1c4k_A          407 VNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGD  486 (730)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCT
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCC
Confidence            44331  112345566677777888888877 555554221                                      1


Q ss_pred             c-eE-----EEEEeCC-----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          363 S-NF-----ILCEVTS-----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~-~~-----~~~~~~~-----------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      + ++     +.+..|+           +.++.++.+.|.++||.+...+    .+.+|++++   +.++.+.|.++|+++
T Consensus       487 ~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~----~~~ir~~~s~g~t~e~i~~Ll~aL~~i  562 (730)
T 1c4k_A          487 NQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQL  562 (730)
T ss_dssp             TCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECC----CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            1 22     4566642           4678999999998999887654    578999876   456677788877664

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.84  E-value=6.8e-26  Score=225.26  Aligned_cols=293  Identities=14%  Similarity=0.071  Sum_probs=205.0

Q ss_pred             CCCCCCeeEcCCCCCC--CC-CCHHHHHHHhc-CCC--CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~--~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +.+++.+|||..+..+  ++ .+|+|.+|+.+ +..  ...|+++...+|.+.|+++++ ..+.+++++|+++++..+++
T Consensus        96 D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik  174 (465)
T 2yky_A           96 DVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALA  174 (465)
Confidence            4567889999887653  44 46889888876 322  245677777899999999995 46789999999999999998


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHHH----HCCC--eEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcC
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDAA----VNGA--AVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~  234 (423)
                      ...  ..++.|++..++|+.+...+.    ..|+  .++.+|.     .|++++++.+++  .++++|+++..++++|.+
T Consensus       175 ~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~  249 (465)
T 2yky_A          175 TATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRHGHDCAAILVEPMLGAGGCV  249 (465)
Confidence            542  345899999999976554433    1233  2333331     378899988864  578888887656679987


Q ss_pred             CC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--
Q 014492          235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--  307 (423)
Q Consensus       235 ~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--  307 (423)
                      .+    .+++.++|+. |+++|+||+|. |..+.  ....+..+...-+.||||.+| .|+|+||+++++++++.+..  
T Consensus       250 ~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~--~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~~~i~~~l~~~~  325 (465)
T 2yky_A          250 PAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG--GGAQEMLGISADLTTLGKYIG-GGMSFGAFGGRRDLMERFDPAR  325 (465)
Confidence            76    5556666665 99999999999 74321  111222222334568999999 59999999999999988876  


Q ss_pred             -----hcCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC----CCCeecCCCceEEEEEeCC-C----
Q 014492          308 -----AKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV----PFLNPYPSYSNFILCEVTS-G----  373 (423)
Q Consensus       308 -----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~p~~~~~~~~~~~~-~----  373 (423)
                           ....++.|++++.++.++|+..+- +...++++++.+++.+.|+++    +.....++.|.++++.+++ .    
T Consensus       326 ~g~~~~~~T~~~npla~aAa~aaL~~l~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~  404 (465)
T 2yky_A          326 DGAFAHAGTFNNNILTMSAGHAALTQIYT-RQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSA  404 (465)
Confidence                 123467889999988888864211 235556666666666666553    3222346778899988763 1    


Q ss_pred             --------CCHHHHHHHHHhCCcEEEeCC
Q 014492          374 --------MDAKKLKDDLAKMGVMIRHYN  394 (423)
Q Consensus       374 --------~~~~~l~~~L~~~gI~v~~~~  394 (423)
                              .....+++.|+++||++.++.
T Consensus       405 ~~~~~~d~~~~~~~~~~ll~~GV~v~p~~  433 (465)
T 2yky_A          405 GDVRAADQQLKELFFFHMLRKGIYLAPRG  433 (465)
Confidence                    114568888889999999876

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.90  E-value=1.1e-22  Score=206.30  Aligned_cols=288  Identities=16%  Similarity=0.079  Sum_probs=203.7

Q ss_pred             HHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc-------C-CCC------eEEEcCCCchhhHHHHHHCCC---eE
Q 014492          132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-------D-PGD------KIVDCPPTFTMYEFDAAVNGA---AV  194 (423)
Q Consensus       132 ~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~-------~-~gd------~Vl~~~p~y~~~~~~~~~~g~---~~  194 (423)
                      .++++.+++++|.+++++++|+|+++++..++.++.       + +|+      .|+++.+.|..+...++..|.   ++
T Consensus       151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v  230 (515)
T 2jis_A          151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSV  230 (515)
T ss_dssp             HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred             HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcE
Confidence            457788999999988899999999999988888663       2 575      789999999999999998888   89


Q ss_pred             EEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc-hhh
Q 014492          195 VKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RME  267 (423)
Q Consensus       195 ~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~  267 (423)
                      +.+|.++++.+|+++|++++.+.     ++++|++++|+||||.+.+.++|.++|+. |+++++|++|+.+..... ...
T Consensus       231 ~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~  310 (515)
T 2jis_A          231 RVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRH  310 (515)
T ss_dssp             EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGG
T ss_pred             EEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHh
Confidence            99998778899999999999642     48999999999999999999999999998 999999999987664221 111


Q ss_pred             hhcc-CCcEEEEccChhhhcccCccccccccCHH--HHHHHHHhcCC-----------------C------CCcHHHHHH
Q 014492          268 WVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLS--IIEYLWRAKQP-----------------Y------NVSVAAEVA  321 (423)
Q Consensus       268 ~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~~--~~~~l~~~~~~-----------------~------~~~~~~~~a  321 (423)
                      .+.. .+..+++.|++|.++ .+.++|+++++++  ++++......+                 +      ....+.+.+
T Consensus       311 ~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~  389 (515)
T 2jis_A          311 LLDGIQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWL  389 (515)
T ss_dssp             GGTTGGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHH
T ss_pred             hcCCCccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHH
Confidence            1111 133478889999876 3457899998765  65542211000                 0      012344455


Q ss_pred             HHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec--CCCceEEEEEeCCC-------CC-H-------HHHHHHHH
Q 014492          322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY--PSYSNFILCEVTSG-------MD-A-------KKLKDDLA  384 (423)
Q Consensus       322 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p~~~~~~~~~~~~~-------~~-~-------~~l~~~L~  384 (423)
                      +..++. .+.+++..++..++++++.+.|++++++.+.  |..+.+.+...|++       .+ .       ..+.+.|.
T Consensus       390 ~l~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~  468 (515)
T 2jis_A          390 MWKAQG-DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV  468 (515)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH
Confidence            555553 3557888889999999999999998766653  33344444333421       11 1       12566777


Q ss_pred             hCCcEEEeCCC-CCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          385 KMGVMIRHYNN-KELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       385 ~~gI~v~~~~~-~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      +.|+.+..... .+..+++||+++    +.++++++.++|++
T Consensus       469 ~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~  510 (515)
T 2jis_A          469 KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELER  510 (515)
T ss_dssp             HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            88876543221 223469999993    55666666666654

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=2.4e-23  Score=205.75  Aligned_cols=266  Identities=15%  Similarity=0.129  Sum_probs=193.4

Q ss_pred             HHHHHHHhcCC---------CCCCCCCcchHHHHHHHHHHhCCCCC--cEEEeCCHHHHHHHHHHHhcCCCCeEEEcC-C
Q 014492          111 PEVREALGQLK---------FPYIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCP-P  178 (423)
Q Consensus       111 ~~v~~al~~~~---------~~~~Y~~~g~~~lr~~ia~~~g~~~~--~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~-p  178 (423)
                      +++++++.+..         .++.|++.+.+++++.+++++|.+..  +++++ |+++++..++.+++++||+|+++. |
T Consensus        38 ~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~  116 (431)
T 3ht4_A           38 FRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGK  116 (431)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSS
T ss_pred             HHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence            56667765421         12556777788999999999997543  22355 567999999999999999999998 9


Q ss_pred             CchhhHHHH----------HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEc-CCCCCcCcCCCHHHHHHHHc--
Q 014492          179 TFTMYEFDA----------AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE--  245 (423)
Q Consensus       179 ~y~~~~~~~----------~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~-~p~NPtG~~~~~~~l~~i~~--  245 (423)
                      .|..+...+          +..|++++.++.+.++.+|+++++++++ +++++|+++ +||||+|...+.+++++|++  
T Consensus       117 ~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~-~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la  195 (431)
T 3ht4_A          117 PYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH-SNTKMIGIQRSKGYATRPSFTISQIKEMIAFV  195 (431)
T ss_dssp             CCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC-TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred             CchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC-CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHH
Confidence            999887655          3479999999987778899999999997 689999999 69999999998888777654  


Q ss_pred             ----CCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcc-cCccccccccCHHHHHHHHHhcCC--C----CC
Q 014492          246 ----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--Y----NV  314 (423)
Q Consensus       246 ----~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~-~G~R~G~i~~~~~~~~~l~~~~~~--~----~~  314 (423)
                          .|+++|+||+|..+........    .+..++++|+||.+|. .+...||+++++++++.+......  +    ..
T Consensus       196 ~~~~~~~~livDea~~~~~~~~~~~~----~g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~  271 (431)
T 3ht4_A          196 KEIKPDVVVFVDNCYGEFIEEQEPCH----VGADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGA  271 (431)
T ss_dssp             HHHCTTCEEEEECTTCTTSSSCCGGG----TTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSC
T ss_pred             HhhCCCCEEEEeCCChhhccCCCccc----cCCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCc
Confidence                3899999999998875333222    2335899999998653 123349999999999998774432  1    11


Q ss_pred             cHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc-----eEEEEEeCCCCCHHHHHHHHHhC
Q 014492          315 SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS-----NFILCEVTSGMDAKKLKDDLAKM  386 (423)
Q Consensus       315 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~-----~~~~~~~~~~~~~~~l~~~L~~~  386 (423)
                      +.....++...+   .....+.++..++.+++.+.|+++++ .+.|...     ..+.+.+++.....++++.|.+.
T Consensus       272 ~~~~~~~~~~~l---~~~~~~~~~~~~~a~~l~~~L~~~g~-~v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l~~~  344 (431)
T 3ht4_A          272 SLYSLQEMYQGF---FLAPHVAGQALKGAIFTAAFLEKLGM-NTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYA  344 (431)
T ss_dssp             CCSCSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTC-CEESCTTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHhHh---hhHHHHHHHHHHHHHHHHHHHHhCcC-EecCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence            111122222222   33456677788889999999988875 3344433     36777886444566788888865

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.88  E-value=1.8e-21  Score=204.62  Aligned_cols=287  Identities=13%  Similarity=0.078  Sum_probs=196.4

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCC-
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS-  204 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~-  204 (423)
                      +.....++++.+++++|.+ +.+++++|+++++..++.+++++||.|+++.|+|.++...++..|++++.++.+. +++ 
T Consensus       203 ~~g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~  281 (755)
T 2vyc_A          203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGI  281 (755)
T ss_dssp             TCHHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSC
T ss_pred             CccHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcccc
Confidence            3344678999999999975 5688999999999999999999999999999999988888888999999998643 233 


Q ss_pred             ---C-----CHHHHHHHhhcC-Cc--------eEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCC--
Q 014492          205 ---L-----NVELIADAVERE-KP--------KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLE--  263 (423)
Q Consensus       205 ---~-----d~~~l~~~i~~~-~~--------~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~--  263 (423)
                         +     |++++++++++. ++        ++++++|| ||+|.+.+.+++.++|+. ++++++||+|..+. +.+  
T Consensus       282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~  360 (755)
T 2vyc_A          282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY  360 (755)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGG
T ss_pred             ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCccc
Confidence               4     999999999642 34        48999998 799999999999999998 99999999997532 221  


Q ss_pred             ---chhhh--hc-cCCcEEEEccChhhhcccCcc-ccccccCHH-------HHHHHHHhcCCCCCcHHHHHHHHHHhC--
Q 014492          264 ---SRMEW--VK-KHDNLIVLRTFSKRAGLAGLR-VGYGAFPLS-------IIEYLWRAKQPYNVSVAAEVAACAALQ--  327 (423)
Q Consensus       264 ---~~~~~--~~-~~~~~i~i~S~SK~~g~~G~R-~G~i~~~~~-------~~~~l~~~~~~~~~~~~~~~a~~~~l~--  327 (423)
                         .....  .+ ..++++++.|+||.+  +|.+ .|+++.+++       ............+++.+...+...+++  
T Consensus       361 ~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l  438 (755)
T 2vyc_A          361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMM  438 (755)
T ss_dssp             TTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH
T ss_pred             CCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence               11111  12 235678999999964  5776 456655332       222222223334566655444444433  


Q ss_pred             -ChHHHHHHHHHHHHHHHHHHHHHccCCC---------CeecCC------------------------------------
Q 014492          328 -NPIYLEKVKEALIKERERLFKLLKDVPF---------LNPYPS------------------------------------  361 (423)
Q Consensus       328 -~~~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~~p~------------------------------------  361 (423)
                       ... .++..+++.++.+++++.|+++++         +.++..                                    
T Consensus       439 ~~~g-g~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (755)
T 2vyc_A          439 DGNS-GLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGES  517 (755)
T ss_dssp             STHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCT
T ss_pred             Hhhh-HHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccc
Confidence             321 233344444444445554443321         221100                                    


Q ss_pred             --------Cc------eEEEEEeCC----------CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHH
Q 014492          362 --------YS------NFILCEVTS----------GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDA  414 (423)
Q Consensus       362 --------~~------~~~~~~~~~----------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~  414 (423)
                              .+      .-+.+.+++          |.++..+.+.|.++||.+...+    .+.+|+.++   +.++.+.
T Consensus       518 ~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~----~~~v~~~~~~g~t~~~~~~  593 (755)
T 2vyc_A          518 WHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT----DFQIMFLFSMGVTRGKWGT  593 (755)
T ss_dssp             TTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEEC----SSEEEEECCTTCCTTTTHH
T ss_pred             cccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecC----CCeEEEEECCCCCHHHHHH
Confidence                    11      124555652          5677899999999999886543    578999875   5666788


Q ss_pred             HHHHHhhh
Q 014492          415 LMECLMHL  422 (423)
Q Consensus       415 l~~al~~l  422 (423)
                      |.++|+++
T Consensus       594 l~~al~~~  601 (755)
T 2vyc_A          594 LVNTLCSF  601 (755)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888765

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.88  E-value=8.8e-22  Score=190.32  Aligned_cols=302  Identities=10%  Similarity=0.031  Sum_probs=211.5

Q ss_pred             CCCCCCCHHHHHHHhcCCC-----C-------CCCCCc--chHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHHHHHHhc
Q 014492          104 ENPYGPPPEVREALGQLKF-----P-------YIYPDP--ESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVL  167 (423)
Q Consensus       104 ~~~~~~~~~v~~al~~~~~-----~-------~~Y~~~--g~~~lr~~ia~~~g~~~-~~i~~-t~G~~~al~~~~~~l~  167 (423)
                      ....+.|++|++++.+.-.     +       ++.+..  -.++.|+.+++++|+++ ++|++ |.|+++++++++..++
T Consensus        19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~   98 (377)
T 3e77_A           19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI   98 (377)
T ss_dssp             ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHG
T ss_pred             cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhcc
Confidence            4556778999999987311     0       110111  14688999999999865 57888 5899999999999998


Q ss_pred             CC--CCeEEEcCCCchh--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          168 DP--GDKIVDCPPTFTM--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       168 ~~--gd~Vl~~~p~y~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      .+  ||+|++..-++..  +...++..|..++.++.+.++..+++.++..++ +++++|.+++..|.||+++|.     |
T Consensus        99 ~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~-~~t~lV~~~h~et~tG~~~pi-----i  172 (377)
T 3e77_A           99 GLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN-PDASYVYYCANETVHGVEFDF-----I  172 (377)
T ss_dssp             GGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC-TTCSCEEEESEETTTTEECSS-----C
T ss_pred             CCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC-CCccEEEEeCccCchheEchh-----h
Confidence            65  8998776655543  334456678888877876666777877776675 789999999999999999998     4


Q ss_pred             HcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH-------------H-HHh
Q 014492          244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-------------L-WRA  308 (423)
Q Consensus       244 ~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~-------------l-~~~  308 (423)
                      ++. |+++++|.+++.... +-   .+...+  +++.|..|.+|.+|  +|+++.+++++++             . .+.
T Consensus       173 ~~~~~~~~~vD~~q~~g~~-~i---d~~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~  244 (377)
T 3e77_A          173 PDVKGAVLVCDMSSNFLSK-PV---DVSKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNS  244 (377)
T ss_dssp             CCCTTCCEEEECTTTTTSS-CC---CGGGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTT
T ss_pred             hccCCCEEEEEcccccCCC-CC---chhhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcC
Confidence            555 999999999984432 11   122333  46678899998778  5777765443211             1 111


Q ss_pred             cCCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeecC-----CCceEEEEEeCCCCCH----
Q 014492          309 KQPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPYP-----SYSNFILCEVTSGMDA----  376 (423)
Q Consensus       309 ~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-----~~~~~~~~~~~~~~~~----  376 (423)
                      ..+++++.....++..+|+.  .. .++.+.++.+++.+++++.|++++++.+.+     ..+..+.+.+++ .+.    
T Consensus       245 ~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~-~~~~~~~  323 (377)
T 3e77_A          245 SLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGN-AKGDDAL  323 (377)
T ss_dssp             TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESS-TTCCHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCC-CCCchhH
Confidence            23456777777777777753  22 478889999999999999999987665332     123457778873 221    


Q ss_pred             -HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          377 -KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       377 -~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                       ..+.+.|.++||.++++..  ..+.+|+|+.   +.++++.|.++|+++
T Consensus       324 ~~~~l~~l~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~  371 (377)
T 3e77_A          324 EKRFLDKALELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKF  371 (377)
T ss_dssp             HHHHHHHHHHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence             4577778889999887642  2457999986   577788888888764

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.87  E-value=4.6e-21  Score=192.67  Aligned_cols=295  Identities=11%  Similarity=0.034  Sum_probs=203.7

Q ss_pred             CCC-CCcchHHHHHHHHHH----hCCCCC----------cEEEeCCHHHHHHHHHHHhcC-------------------C
Q 014492          124 YIY-PDPESRRLRAALAKD----SGLESD----------HILVGCGADELIDLIMRCVLD-------------------P  169 (423)
Q Consensus       124 ~~Y-~~~g~~~lr~~ia~~----~g~~~~----------~i~~t~G~~~al~~~~~~l~~-------------------~  169 (423)
                      ..| ..++..++++.+++|    +|.+.+          ..++|+|+++++..++.+..+                   +
T Consensus       108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~  187 (481)
T 4e1o_A          108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA  187 (481)
T ss_dssp             SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred             CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence            445 455667777766554    577542          578999999998877765532                   5


Q ss_pred             CCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHH
Q 014492          170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKIL  244 (423)
Q Consensus       170 gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~  244 (423)
                      ++.|+++.++|..+...++..|++++.+|.++++.+|+++|++++++.     .+.+|+++.++|+||.+-++++|.++|
T Consensus       188 ~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la  267 (481)
T 4e1o_A          188 RLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC  267 (481)
T ss_dssp             TEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred             CeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHH
Confidence            678999999999999999999999999998888899999999999642     167788889999999999999999999


Q ss_pred             cC-CCEEEEccCCccccC-CCchhhhhc-cCCcEEEEccChhhhcccCccccccccC-HHHHHHHHHhcCCC--------
Q 014492          245 EM-PILVVLDEAYTEFSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY--------  312 (423)
Q Consensus       245 ~~-~~~li~Deay~~~~~-~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~~~~l~~~~~~~--------  312 (423)
                      +. |+++++|++|..+.. .+....... ......+..+++|.++.| ..+|+++.. ++.+.........|        
T Consensus       268 ~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~  346 (481)
T 4e1o_A          268 AREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGV  346 (481)
T ss_dssp             HHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred             HHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence            98 999999999986542 111111111 111235667899987754 446666654 44433211111000        


Q ss_pred             -------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC-CCCHH
Q 014492          313 -------------NVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS-GMDAK  377 (423)
Q Consensus       313 -------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~-~~~~~  377 (423)
                                   ....+.+.++..++. .+.++++.++..++++++.+.|++++++.+ .+...+++++++++ .....
T Consensus       347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~~~~  425 (481)
T 4e1o_A          347 ATDFMHWQIPLSRRFRSVKLWFVIRSFG-VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNSLTE  425 (481)
T ss_dssp             SCCGGGGSSSSCCCCTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHHHHH
T ss_pred             CCCcccccccCCCCccHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchHHHH
Confidence                         012444555555542 356788899999999999999999876665 45667888888863 22357


Q ss_pred             HHHHHHHhCCc-EEEeCCCCCCCCeEEEEecC----hhhHHHHHHHHhh
Q 014492          378 KLKDDLAKMGV-MIRHYNNKELKGYVRVSVGK----PEHTDALMECLMH  421 (423)
Q Consensus       378 ~l~~~L~~~gI-~v~~~~~~~~~~~iRis~~~----~~~~~~l~~al~~  421 (423)
                      ++.+.|.++|+ .+.+.. ..+..++|++++.    .++++++.++|++
T Consensus       426 ~l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~  473 (481)
T 4e1o_A          426 NVLKEIAKAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRD  473 (481)
T ss_dssp             HHHHHHHHHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            88888987774 444432 2335789999763    3455555555543

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.86  E-value=1.1e-20  Score=189.45  Aligned_cols=294  Identities=9%  Similarity=-0.012  Sum_probs=198.5

Q ss_pred             CCC-CCcchHHHHHHH----HHHhCCCCC---------cEEEeCCHHHHHHHHHHHhcC-------------------CC
Q 014492          124 YIY-PDPESRRLRAAL----AKDSGLESD---------HILVGCGADELIDLIMRCVLD-------------------PG  170 (423)
Q Consensus       124 ~~Y-~~~g~~~lr~~i----a~~~g~~~~---------~i~~t~G~~~al~~~~~~l~~-------------------~g  170 (423)
                      ..| ..++..++++.+    ++.+|.+.+         ..++|+|+++++..++.+...                   ++
T Consensus       103 ~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~  182 (475)
T 3k40_A          103 FTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGK  182 (475)
T ss_dssp             SSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred             cCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCC
Confidence            345 445666666665    555687543         688999999998777765421                   34


Q ss_pred             CeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492          171 DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILE  245 (423)
Q Consensus       171 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~  245 (423)
                      +.|+++.++|..+...++..|++++.+|.++++ +|+++|++++.+.     .+.+|+++.++|+||.+.++++|.++|+
T Consensus       183 ~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~  261 (475)
T 3k40_A          183 LVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGN  261 (475)
T ss_dssp             EEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred             eEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHH
Confidence            689999999999999999999999999988788 9999999999642     1677888899999999999999999998


Q ss_pred             C-CCEEEEccCCccccC-CCchhhhhcc-CCcEEEEccChhhhcccCccccccccCH-HHHHHHHHhcCC----------
Q 014492          246 M-PILVVLDEAYTEFSG-LESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP----------  311 (423)
Q Consensus       246 ~-~~~li~Deay~~~~~-~~~~~~~~~~-~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~----------  311 (423)
                      . |+++++|++|..... .+.....+.. .....+..+++|.++ ....+|+++..+ +.+.........          
T Consensus       262 ~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~  340 (475)
T 3k40_A          262 KHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSA  340 (475)
T ss_dssp             HTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESSGGGC-------------------
T ss_pred             HhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccC-CCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCC
Confidence            7 999999999986432 1111111111 122467788999765 334567766643 332211110000          


Q ss_pred             -----CC------CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeCC-CCCHHH
Q 014492          312 -----YN------VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTS-GMDAKK  378 (423)
Q Consensus       312 -----~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~~-~~~~~~  378 (423)
                           ++      ...+.+.++..++. .+.++++.++..++++++.+.|++++++.+. +...++++++++. .....+
T Consensus       341 ~~~~~~~~~~sr~~~~l~l~~al~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~~~~  419 (475)
T 3k40_A          341 PDYRHWQIPLGRRFRALKLWFVLRLYG-VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNERNEA  419 (475)
T ss_dssp             --------CCCGGGTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHHHHH
T ss_pred             CCcccccccCCCcccHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHHHHH
Confidence                 00      11333444444442 3557888899999999999999998777653 5567788888853 223678


Q ss_pred             HHHHHHhCCcE-EEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhh
Q 014492          379 LKDDLAKMGVM-IRHYNNKELKGYVRVSVG----KPEHTDALMECLMH  421 (423)
Q Consensus       379 l~~~L~~~gI~-v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~  421 (423)
                      +.+.|.++|+. +.+.. ..+..++|++++    +.++++++.++|++
T Consensus       420 l~~~L~~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~  466 (475)
T 3k40_A          420 LLKRINGRGHIHLVPAK-IKDVYFLRMAICSRFTQSEDMEYSWKEVSA  466 (475)
T ss_dssp             HHHHHHHHTSCBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCcEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            88899876654 34332 233679999986    34455555555544

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.86  E-value=3.1e-21  Score=187.51  Aligned_cols=300  Identities=12%  Similarity=0.038  Sum_probs=202.5

Q ss_pred             CCCCCHHHHHHHhcCC-C-----------CCCCCC--cchHHHHHHHHHHhCCCC-CcEEE-eCCHHHHHHHHHHHhcCC
Q 014492          106 PYGPPPEVREALGQLK-F-----------PYIYPD--PESRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVLDP  169 (423)
Q Consensus       106 ~~~~~~~v~~al~~~~-~-----------~~~Y~~--~g~~~lr~~ia~~~g~~~-~~i~~-t~G~~~al~~~~~~l~~~  169 (423)
                      +.+.+++|++++.+.. .           .++.+.  .-.++.|+.+++++|++. ++|++ |+|+|+++++++..++++
T Consensus        35 pt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~  114 (386)
T 3qm2_A           35 PAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD  114 (386)
T ss_dssp             SCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT
T ss_pred             CCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC
Confidence            3456899999997631 1           011111  135789999999999854 47888 699999999999999999


Q ss_pred             CCeEEEcCCCch--hhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcC-CCHHHHHHH
Q 014492          170 GDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDLLKI  243 (423)
Q Consensus       170 gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~-~~~~~l~~i  243 (423)
                      ||+|++..-++.  .+...++..| ++..++.+   .+..+++++++..++ +++++|.+++..|.||++ .|.+++.  
T Consensus       115 gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~-~~t~lV~~~h~et~tG~~i~pi~~i~--  190 (386)
T 3qm2_A          115 KTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS-DNAAYLHYCPNETIDGIAIDETPDFG--  190 (386)
T ss_dssp             CCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC-TTCSCEEECSEETTTTEECCCCCCCC--
T ss_pred             CCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC-CCCcEEEEECCcCCcCEecCchhhhc--
Confidence            998764443333  2334455678 88888876   332377888888886 789999999988999996 7777663  


Q ss_pred             HcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHH-------------H-Hhc
Q 014492          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL-------------W-RAK  309 (423)
Q Consensus       244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l-------------~-~~~  309 (423)
                        .|+++++|.+++.... +-.   +...+  +.+.|..|.+|.+|  +|+++.+++.++++             . ...
T Consensus       191 --~g~~~~vDa~qs~g~~-pid---v~~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~  260 (386)
T 3qm2_A          191 --PEVVVTADFSSTILSA-PLD---VSRYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDS  260 (386)
T ss_dssp             --TTCCEEEECTTTTTSS-CCC---GGGCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC--
T ss_pred             --CCCEEEEEcccccCCC-CCC---ccccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCC
Confidence              6899999999884332 111   22333  45678899998777  68787765542211             1 111


Q ss_pred             CCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCCeec--C--CCceEEEEEeCC-CCCHHHHHH
Q 014492          310 QPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFLNPY--P--SYSNFILCEVTS-GMDAKKLKD  381 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--p--~~~~~~~~~~~~-~~~~~~l~~  381 (423)
                      .+++++.....++..+++.  .. .+++..++.+++++++++.|+++++....  +  .....+.+.+++ +.+ ..+..
T Consensus       261 ~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~-~~~~~  339 (386)
T 3qm2_A          261 MFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLD-KVFLE  339 (386)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGH-HHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcccc-HHHHH
Confidence            2245555556666666643  22 47888899999999999999988642221  1  123467778874 344 67788


Q ss_pred             HHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          382 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .|.++||.++.+...  .+.+|+|+.   +.+++++|.++|+++
T Consensus       340 ~L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~  381 (386)
T 3qm2_A          340 ESFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDF  381 (386)
T ss_dssp             HHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHH
Confidence            888999998876432  356999986   477888888888765

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.85  E-value=1.7e-20  Score=180.65  Aligned_cols=304  Identities=13%  Similarity=0.077  Sum_probs=210.8

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCC------------CCCCCCc--chHHHHHHHHHHhCCC-CCcEEE-eCCHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKF------------PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELI  159 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~------------~~~Y~~~--g~~~lr~~ia~~~g~~-~~~i~~-t~G~~~al  159 (423)
                      +.+.|..  .+.+.+++|++++.+.-.            .++-+..  -.++.|+.+++++|++ +++|++ |+|+++++
T Consensus         5 ~~~~f~p--gpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~   82 (361)
T 3m5u_A            5 RKINFSA--GPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF   82 (361)
T ss_dssp             CCEECCS--SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             ceEeecC--CCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence            3455655  345567999999987311            0111111  2468899999999986 457887 99999999


Q ss_pred             HHHHHHhcCCCCeEE-EcCCCch-hhHHHHHHCCCeEEEecCCCCCC--CCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          160 DLIMRCVLDPGDKIV-DCPPTFT-MYEFDAAVNGAAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       160 ~~~~~~l~~~gd~Vl-~~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++++..++ +||++. +....|. .+...++..|+++..++.+.+..  .+++.  + ++ +++++|.++|..|.||+++
T Consensus        83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~-~~t~lv~~~~~e~~tG~~~  157 (361)
T 3m5u_A           83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FS-DNADYAYICSNNTIYGTQY  157 (361)
T ss_dssp             HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CC-TTSSEEEEESEETTTTEEC
T ss_pred             HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cC-CCCCEEEEeCCCCCcceeC
Confidence            99999998 788652 3333342 33445667899999998765543  46665  3 75 6899999999999999987


Q ss_pred             CHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHH--------
Q 014492          236 NDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR--------  307 (423)
Q Consensus       236 ~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~--------  307 (423)
                      +.     |++.|+++++|.+++..... -...     +-.+++.|..|.+|.+|  +|+++.+++..+.+..        
T Consensus       158 ~~-----i~~~~~~~~vD~~q~~g~~~-id~~-----~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~~~~~p~~~~  224 (361)
T 3m5u_A          158 QN-----YPKTKTPLIVDASSDFFSRK-VDFS-----NIALFYGGVQKNAGISG--LSCIFIRKDMLERSKNKQIPSMLN  224 (361)
T ss_dssp             SS-----CCCCSSCEEEECGGGTTSSC-CCCT-----TEEEEEEETTTTSSCTT--CEEEEEEHHHHHHHHTCCCCGGGC
T ss_pred             Cc-----ccccCCEEEEEcccccCCCC-CCcc-----cCCEEEEechhccCCCc--cEEEEEcHHHHhhhcCCCCCceee
Confidence            72     44559999999998744321 1111     12377889999998777  6889888888766532        


Q ss_pred             -------hcCCCCCcHHHHHHHHHHhCC--hH-HHHHHHHHHHHHHHHHHHHHccCCCC-eec-C---CCceEEEEEeCC
Q 014492          308 -------AKQPYNVSVAAEVAACAALQN--PI-YLEKVKEALIKERERLFKLLKDVPFL-NPY-P---SYSNFILCEVTS  372 (423)
Q Consensus       308 -------~~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~-p---~~~~~~~~~~~~  372 (423)
                             ...+++++.....++.++++.  .. .++.+.++.+++++++++.|++++++ ... +   .....+.+.+++
T Consensus       225 ~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~  304 (361)
T 3m5u_A          225 YLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAK  304 (361)
T ss_dssp             HHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESS
T ss_pred             hHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCC
Confidence                   112246777777777666653  22 37888999999999999999999854 332 1   123456778874


Q ss_pred             --CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          373 --GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       373 --~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                        +.+ .++...|.++||.++.+..  ..+.+|+|+.   +.++++++.++|+++
T Consensus       305 ~~~~~-~~~~~~L~~~gI~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~  356 (361)
T 3m5u_A          305 NKDLE-PLFVKEAEEAGMIGLKGHR--ILGGIRASIYNALNLDQVKTLCEFMKEF  356 (361)
T ss_dssp             CTTHH-HHHHHHHHHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             chhhh-HHHHHHHHHCCCEEecCCC--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence              233 5788888899999887643  2356999986   577788888888765

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.82  E-value=1.3e-18  Score=179.93  Aligned_cols=287  Identities=10%  Similarity=0.103  Sum_probs=194.3

Q ss_pred             CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCC
Q 014492          127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL  205 (423)
Q Consensus       127 ~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~  205 (423)
                      |..-..++++.+|+++|.+ ..+++++|++.++..++.++++|||.|+++.++|.++...++..|++++.++.+ +++++
T Consensus       193 ~~g~i~eaE~~lA~~fGa~-~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi  271 (715)
T 3n75_A          193 HSGPHKEAEQYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI  271 (715)
T ss_dssp             TBTHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCC
T ss_pred             CcHHHHHHHHHHHHHhCCC-CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccc
Confidence            3333679999999999974 567889999999999999999999999999999999999999999999999853 23443


Q ss_pred             ---------CHHHHHHHhhcC-Cce---EEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCcccc-CCCch--hhhh
Q 014492          206 ---------NVELIADAVERE-KPK---CIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFS-GLESR--MEWV  269 (423)
Q Consensus       206 ---------d~~~l~~~i~~~-~~~---~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~-~~~~~--~~~~  269 (423)
                               |++++++++.+. ++|   ++++++| ||+|.+++.+++.++|+.. .+++||+|..+. +.+..  ...+
T Consensus       272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-~livDEAH~~~~~f~~~~~~~~al  349 (715)
T 3n75_A          272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-SIHFDSAWVPYTNFSPIYEGKCGM  349 (715)
T ss_dssp             BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-EEEEECTTCTTGGGSGGGTTSSTT
T ss_pred             ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC-cEEEccccccccccCCcccccccc
Confidence                     899999999742 334   8999999 9999999999999999863 379999998653 32211  1112


Q ss_pred             cc---CCcE-EEEccChhhhcccCc-cccccccCHH----HHHHHHHhcCCCCCcHHHHHHHHHHhCCh--HHHHHHHHH
Q 014492          270 KK---HDNL-IVLRTFSKRAGLAGL-RVGYGAFPLS----IIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLEKVKEA  338 (423)
Q Consensus       270 ~~---~~~~-i~i~S~SK~~g~~G~-R~G~i~~~~~----~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~  338 (423)
                      ..   .+.+ +++.|+||.++  |+ ..|+++++++    .+++........+++.+..+++..+++.-  ..-++.+++
T Consensus       350 ~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~  427 (715)
T 3n75_A          350 SGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLING  427 (715)
T ss_dssp             SSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             ccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHH
Confidence            11   2343 66999999864  54 2477777543    33444444455667777666665555321  122344555


Q ss_pred             HHHHHHHHHHHHccCC-----C-CeecC-------------------------CCceE-----EEEEeCC----------
Q 014492          339 LIKERERLFKLLKDVP-----F-LNPYP-------------------------SYSNF-----ILCEVTS----------  372 (423)
Q Consensus       339 ~~~~~~~l~~~L~~~~-----~-~~~~p-------------------------~~~~~-----~~~~~~~----------  372 (423)
                      +.++.+++++.|++++     | +.+..                         .+..+     +.+..++          
T Consensus       428 l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~  507 (715)
T 3n75_A          428 SIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDF  507 (715)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSS
T ss_pred             HHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccC
Confidence            5666666666665442     1 12211                         01111     3455542          


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE--Eec-ChhhHHHHHHHHhhh
Q 014492          373 GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV--SVG-KPEHTDALMECLMHL  422 (423)
Q Consensus       373 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi--s~~-~~~~~~~l~~al~~l  422 (423)
                      |.++..+.+.|.++||.+...+    ...|=+  +++ +.++.++|.++|.++
T Consensus       508 Gi~g~~~~~~L~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~  556 (715)
T 3n75_A          508 GIPASIVAKYLDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDF  556 (715)
T ss_dssp             CCCHHHHHHHHHHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5677899999999999887654    233333  333 456677888887765

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.72  E-value=2.9e-16  Score=154.96  Aligned_cols=315  Identities=16%  Similarity=0.146  Sum_probs=199.1

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCCCCC--CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y--~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +.+++.+||+..+  .+.++ .+|+|.+|+.+ +.....+  +.....++.+.|++.+. ..+.+++++++++|+..+++
T Consensus        83 D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~~p-~~~~v~f~~SGsEA~e~Aik  161 (454)
T 4ao9_A           83 DADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICERFP-QIEQLRFTNSGTEANLMALT  161 (454)
T ss_dssp             ETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHH
Confidence            4567889998765  44455 47999988876 3322222  33446689999999886 46799999999999999988


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHHHH------CCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcC
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDAAV------NGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI  234 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~------~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~  234 (423)
                      ...  ...++|+....+|+.....+-.      .......+|     .-|++.+++.+++  .++.+|++...+...|.+
T Consensus       162 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p-----~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~  236 (454)
T 4ao9_A          162 AALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLP-----YNDAQTARAQIERHGPEIAVVLVEPMQGASGCI  236 (454)
T ss_dssp             HHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEEC-----TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCE
T ss_pred             HHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCC-----CchHHHHHHHHhhcCCceEEEEeccccCCCCcc
Confidence            543  1237888888888643211100      111233333     2378889888864  357788888777778988


Q ss_pred             CC----HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc
Q 014492          235 IN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK  309 (423)
Q Consensus       235 ~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~  309 (423)
                      .+    ++++++||+. |+++|+||++..-....-.....+..+.++   +++|.+| .|+.+|.+.+.+++++.+....
T Consensus       237 ~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~G~~~a~e~~gv~PDi~---t~gK~lg-gG~Piga~~~~~ei~~~~~~~~  312 (454)
T 4ao9_A          237 PGQPDFLQALRESATQVGALLVFDEVMTSRLAPHGLANKLGIRSDLT---TLGKYIG-GGMSFGAFGGRADVMALFDPRT  312 (454)
T ss_dssp             ECCHHHHHHHHHHHHHHTCEEEEECTTGGGGSTTCHHHHHTCCCSEE---EEEGGGG-TTSSCEEEEECHHHHGGGCTTT
T ss_pred             CCchhhHHHHHHHHhhcCCEEEEECCCcCCCccccchhccCCCCcEE---EeccccC-CCCcceeeeeHHHHHHHHhhcc
Confidence            77    6677777877 999999999973211111122233334443   4689998 7899999999999998775321


Q ss_pred             ------CCCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCC-------
Q 014492          310 ------QPYNVSVAAEVAACAALQ---NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-------  373 (423)
Q Consensus       310 ------~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-------  373 (423)
                            ..|+.|+++..++.+.|+   +++..++..+.-+..++.|.+.+++.+.+......|.++.+.+.++       
T Consensus       313 ~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~  392 (454)
T 4ao9_A          313 GPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSED  392 (454)
T ss_dssp             CSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGG
T ss_pred             CCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHH
Confidence                  235678888888877765   3444444444444444444444444443332334566666665321       


Q ss_pred             ---CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHhh
Q 014492          374 ---MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLMH  421 (423)
Q Consensus       374 ---~~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~~  421 (423)
                         .+   ...++..|+++||++.|..      .+.++.. +++++|++.+++++
T Consensus       393 ~~~~d~~~~~~~~~~ll~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~  441 (454)
T 4ao9_A          393 LAAVDGRLRQLLFFHLLNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIGS  441 (454)
T ss_dssp             GTTCCHHHHHHHHHHHHHTTEECCTTC------EEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHHHHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHHH
Confidence               12   2346677889999987643      3344433 45566666666654

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.67  E-value=7.7e-15  Score=145.35  Aligned_cols=325  Identities=13%  Similarity=0.120  Sum_probs=198.8

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc----CCCCCCC--CCcchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ----LKFPYIY--PDPESRRLRAALAKDSGL-ESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~----~~~~~~Y--~~~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~  160 (423)
                      +.+++.+||+..+  .+.++ .+|++.+|+.+    ..+...+  +.....+|.+.+++.... ..+.+++++++++|++
T Consensus        60 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e  139 (456)
T 4atq_A           60 DVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVE  139 (456)
T ss_dssp             ETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHH
Confidence            4567889999776  55565 46899888865    2222222  333455788888888754 3568999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CC-------------CeEEEecCCC------CCCCCHHHHHH------
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS------DFSLNVELIAD------  212 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~~------~~~~d~~~l~~------  212 (423)
                      .+++...  ....+|+....+|++....+.. .+             ..+..+|...      ....+.+.+++      
T Consensus       140 ~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e  219 (456)
T 4atq_A          140 NAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIE  219 (456)
T ss_dssp             HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHH
Confidence            9998432  2347889888888754433221 11             2345555221      11122333333      


Q ss_pred             -HhhcCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhh
Q 014492          213 -AVEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       213 -~i~~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~  284 (423)
                       .+...++.+|++...+...|.+.+    .++++++|+. |+++|.||++..|...+..  ....+..+.++   +++|.
T Consensus       220 ~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDiv---t~gK~  296 (456)
T 4atq_A          220 KQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDII---TMAKG  296 (456)
T ss_dssp             HHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE---EECGG
T ss_pred             HhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchh---hhhhc
Confidence             222346888898877777787765    4556667776 9999999999987543322  12222234443   35799


Q ss_pred             hcccCccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCC-----
Q 014492          285 AGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVP-----  354 (423)
Q Consensus       285 ~g~~G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~-----  354 (423)
                      +| .|+.+|.+++.+++.+.+....  ..|+.++++.+++.+.|+.   ++.+++..+.-...++.|.+..++++     
T Consensus       297 lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~  375 (456)
T 4atq_A          297 IA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGS  375 (456)
T ss_dssp             GG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred             cc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence            87 8899999999999887765433  3477899999888888863   22233332222223333333333332     


Q ss_pred             CCeecCCCceEEEEEeCCCC-------CHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          355 FLNPYPSYSNFILCEVTSGM-------DAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       355 ~~~~~p~~~~~~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      .+.-..+.|.++.+++.+..       -...+.+.++++|+++.+.+.  ..+.|||......+.++++++++.
T Consensus       376 ~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~  447 (456)
T 4atq_A          376 VVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEV  447 (456)
T ss_dssp             CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred             ceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence            22222456778888874211       145688888999999987542  246899996532222444444443

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.67  E-value=1.3e-14  Score=139.65  Aligned_cols=313  Identities=14%  Similarity=0.130  Sum_probs=201.3

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHH----HHHHHHHHhCCCCC----cEEEeCCHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRR----LRAALAKDSGLESD----HILVGCGADEL  158 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~------~g-~~~----lr~~ia~~~g~~~~----~i~~t~G~~~a  158 (423)
                      -|.|=..||-.  ++.|.+++...   .+.-+||.      .. ..+    .++...+.||++..    ||-.-+|++ |
T Consensus        56 ~ieLIASEN~~--S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~-A  132 (490)
T 3ou5_A           56 GLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSP-A  132 (490)
T ss_dssp             SEECCTTCCCC--CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH-H
T ss_pred             CceEecCCCcC--CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHH-H
Confidence            38888888866  58999998763   23334442      11 122    33445567898876    677777775 6


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHH--------HHCCC--eEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDA--------AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      ...++.+|++|||+|+..+..+.++...-        ...|.  +.+.++.+ ++..+|.|++++...+.+||+|++-.-
T Consensus       133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~S  212 (490)
T 3ou5_A          133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTS  212 (490)
T ss_dssp             HHHHHHHHCC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCc
Confidence            66788889999999998887775432211        11222  23444433 456799999999998889999997654


Q ss_pred             CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCC---CchhhhhccCCcEEEEccChhhhcccCccccccccCH---
Q 014492          228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL---  299 (423)
Q Consensus       228 ~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~---  299 (423)
                      .+|  ..++.+++++||+. |.+|++|-+|.-. .-+   ++++..    . .++..|.+|++  .|-|-|.|+.++   
T Consensus       213 aY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~----A-DvVTtTTHKTL--rGPrGG~Il~~~~~~  283 (490)
T 3ou5_A          213 AYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH----A-DIVTTTTHKTL--RGARSGLIFYRKGVK  283 (490)
T ss_dssp             SCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT----C-SEEEEESSSTT--CSCSCEEEEEECSEE
T ss_pred             cCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc----c-eEEeccccccc--cCCCceEEEeccccc
Confidence            444  77899999999998 9999999999642 211   233332    2 37788889986  788999999765   


Q ss_pred             ------------HHHHHHHHhcCCC---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-C
Q 014492          300 ------------SIIEYLWRAKQPY---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-S  361 (423)
Q Consensus       300 ------------~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~  361 (423)
                                  ++.+++.+...|.   ++.....++...++..  ....++..+++.+|.+.|.+.|.+.++-.+.. .
T Consensus       284 ~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgT  363 (490)
T 3ou5_A          284 AVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGT  363 (490)
T ss_dssp             EECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC
T ss_pred             cccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCC
Confidence                        4567777766553   2222222222222322  23457788888999999999999887544432 2


Q ss_pred             CceEEEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          362 YSNFILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       362 ~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      ....+++++. .+.+..+..+.|.+.||.+.    |++. +..++.|||...       .+++++++.+.|.+
T Consensus       364 dnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~  436 (490)
T 3ou5_A          364 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE  436 (490)
T ss_dssp             SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence            3345677874 47788888888999999997    3432 334568999863       46667777766653

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.62  E-value=2.2e-13  Score=135.43  Aligned_cols=319  Identities=15%  Similarity=0.145  Sum_probs=194.9

Q ss_pred             CCCCCCeeEcCCCC--CCCC-CCHHHHHHHhc-C---CCCCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-L---KFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~---~~~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~  160 (423)
                      +.+++.+||+..+.  +.++ .+|++.+|+.+ +   .+.+.+   +.....+|-+.|++..+.+.+.|++++++++|++
T Consensus        63 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e  142 (473)
T 4e3q_A           63 DVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAND  142 (473)
T ss_dssp             ETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHH
Confidence            45678899987763  3344 36888888765 2   221222   2223456778888888766679999999999999


Q ss_pred             HHHHHhc-------CCC-CeEEEcCCCchhhHHHH-HHCCC-----------eEEEecCCC-----CCCCC--------H
Q 014492          161 LIMRCVL-------DPG-DKIVDCPPTFTMYEFDA-AVNGA-----------AVVKVPRKS-----DFSLN--------V  207 (423)
Q Consensus       161 ~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~-~~~g~-----------~~~~v~~~~-----~~~~d--------~  207 (423)
                      .+++...       .++ .+|+....+|+.....+ ...|-           ..+.++.+.     .....        .
T Consensus       143 ~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  222 (473)
T 4e3q_A          143 TMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLA  222 (473)
T ss_dssp             HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHH
Confidence            9998532       133 57888888887433322 22221           123333211     01111        2


Q ss_pred             HHHHHHhhc---CCceEEEEcCCCCCcCcCCCH----HHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEE
Q 014492          208 ELIADAVER---EKPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIV  277 (423)
Q Consensus       208 ~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~----~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~  277 (423)
                      +++++.+.+   .++.+|++...+.-.|.+.+.    +++++||+. |+++|.||++..|...+..  ....+..+.+++
T Consensus       223 ~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t  302 (473)
T 4e3q_A          223 RELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII  302 (473)
T ss_dssp             HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE
T ss_pred             HHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHH
Confidence            344454432   356778887777777877653    455666666 9999999999988643332  222333344443


Q ss_pred             EccChhhhcccC-ccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Q 014492          278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLF  347 (423)
Q Consensus       278 i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~  347 (423)
                         ++|.++ .| +.+|.+++++++.+.+...         ...|+.++++.+++.+.|+.-+ -+...++.++.-++|.
T Consensus       303 ---~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~-~~~l~~~~~~~g~~l~  377 (473)
T 4e3q_A          303 ---SSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVM-NEGLAENVRRLAPRFE  377 (473)
T ss_dssp             ---ECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHH-HSSHHHHHHHHHHHHH
T ss_pred             ---hccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhc-cccHHHHHHHHHHHHH
Confidence               579998 55 9999999999998887542         2346788999888888875311 0122333444444555


Q ss_pred             HHHcc---CCCCeecCCCceEEEEEeCCC-----------CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---Chh
Q 014492          348 KLLKD---VPFLNPYPSYSNFILCEVTSG-----------MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPE  410 (423)
Q Consensus       348 ~~L~~---~~~~~~~p~~~~~~~~~~~~~-----------~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~  410 (423)
                      +.|++   .+.+.-..+.|.++-+++...           .....+.+.+.++|+++++.+     +.+||+..   +.+
T Consensus       378 ~~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-----~~i~l~PPL~it~~  452 (473)
T 4e3q_A          378 ERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-----QSVVLCPPFILTEA  452 (473)
T ss_dssp             HHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-----TEEEECCCTTCCHH
T ss_pred             HHHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-----CEEEEeCCCCCCHH
Confidence            54443   343332345567777776321           114678888899999998865     57898854   444


Q ss_pred             hHHHHHHHH
Q 014492          411 HTDALMECL  419 (423)
Q Consensus       411 ~~~~l~~al  419 (423)
                      +.+++.+.+
T Consensus       453 eid~~~~~l  461 (473)
T 4e3q_A          453 QMDEMFDKL  461 (473)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            444444433

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.62  E-value=6.6e-16  Score=163.51  Aligned_cols=316  Identities=14%  Similarity=0.185  Sum_probs=193.2

Q ss_pred             CeeEcCCC--CCCCCC--CHHHHHHHhc-C---CCCC--CCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHH
Q 014492           96 DIVKIDAN--ENPYGP--PPEVREALGQ-L---KFPY--IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR  164 (423)
Q Consensus        96 ~~i~l~~~--~~~~~~--~~~v~~al~~-~---~~~~--~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~  164 (423)
                      .+||+.++  .+.++.  +|++.+|+.+ +   .+..  .+......+|.+.|++..+-. .+.+++++++++|++.+++
T Consensus       381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK  460 (831)
T 4a0g_A          381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALK  460 (831)
T ss_dssp             EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHH
T ss_pred             heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHH
Confidence            57888765  445554  5889888875 2   2211  122223457888888887643 4789999999999999888


Q ss_pred             Hhc-----CC------------CCeEEEcCCCchhhHH-HHHHCCCe---------------E-------------EEec
Q 014492          165 CVL-----DP------------GDKIVDCPPTFTMYEF-DAAVNGAA---------------V-------------VKVP  198 (423)
Q Consensus       165 ~l~-----~~------------gd~Vl~~~p~y~~~~~-~~~~~g~~---------------~-------------~~v~  198 (423)
                      ...     ..            ..+||...-+|+.-.. .....|..               +             ..++
T Consensus       461 ~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  540 (831)
T 4a0g_A          461 MAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNIS  540 (831)
T ss_dssp             HHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEE
T ss_pred             HHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEec
Confidence            542     11            2368888888863332 22333210               0             1122


Q ss_pred             CCCCCC---------CC------------------HHHHHHHhh-------cCCceEEEEcCC-CCCcCcCC-C---HHH
Q 014492          199 RKSDFS---------LN------------------VELIADAVE-------REKPKCIFLTSP-NNPDGSII-N---DED  239 (423)
Q Consensus       199 ~~~~~~---------~d------------------~~~l~~~i~-------~~~~~~i~l~~p-~NPtG~~~-~---~~~  239 (423)
                      .+..+.         -|                  .+.+++.+.       ..++.+|++... ++..|.+. +   .++
T Consensus       541 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~  620 (831)
T 4a0g_A          541 LPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRV  620 (831)
T ss_dssp             CCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHH
T ss_pred             CCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHH
Confidence            111100         01                  256777774       235778888765 78888776 4   455


Q ss_pred             HHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHh-------
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA-------  308 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~-------  308 (423)
                      +.+||+. |+++|+||++..|...+..  ....+..+.++   +++|.++ .| +++|++++++++++.+...       
T Consensus       621 l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii---tlsK~L~-gG~~Plgav~~~~~i~~~~~~~~~~~~~~  696 (831)
T 4a0g_A          621 LVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA---CFAKLLT-GGMVPLAVTLATDAVFDSFSGDSKLKALL  696 (831)
T ss_dssp             HHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE---EECGGGG-TTSSCCEEEEECHHHHHTTCSSCGGGSCC
T ss_pred             HHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE---EEecccc-cCccCcEEEEECHHHHHHHhcccccccce
Confidence            5666665 9999999999988643332  22223334433   5899997 57 7999999999999887542       


Q ss_pred             -cCCCCCcHHHHHHHHHHhCC---hHHHHHHH---HHHHH-HHHHHHHHHccCCCCeecCCCceEEEEEeCCC-------
Q 014492          309 -KQPYNVSVAAEVAACAALQN---PIYLEKVK---EALIK-ERERLFKLLKDVPFLNPYPSYSNFILCEVTSG-------  373 (423)
Q Consensus       309 -~~~~~~~~~~~~a~~~~l~~---~~~~~~~~---~~~~~-~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~-------  373 (423)
                       ...|+.++++++++.++|+.   +++.++..   +++++ .++.+.+.+++.+.+......|.++.+++.+.       
T Consensus       697 hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~  776 (831)
T 4a0g_A          697 HGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNSGYA  776 (831)
T ss_dssp             CCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC---------
T ss_pred             eecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCccccccc
Confidence             23467889999888887753   22222221   11111 12234455666665554456678888887421       


Q ss_pred             -CCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          374 -MDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       374 -~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                       ..+..+.+.|.++||++++.+     +.|||+..   +.++++++.++|+
T Consensus       777 ~~~a~~~~~~l~e~Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~  822 (831)
T 4a0g_A          777 SLYAKSLLIMLREDGIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLY  822 (831)
T ss_dssp             CHHHHHHHHHHHHTTEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHH
Confidence             124568888999999999764     79999854   3444444444443

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.53  E-value=3.4e-12  Score=124.88  Aligned_cols=289  Identities=11%  Similarity=-0.030  Sum_probs=174.5

Q ss_pred             HHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCC----CCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCC
Q 014492          133 RLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFS  204 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~  204 (423)
                      .+...+.+.+|++.. ..++++|+|.+...++...+++    ++.|+++.-+|.+....+...|+.++.++.   ++.+.
T Consensus       102 ~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~  181 (450)
T 3bc8_A          102 SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELR  181 (450)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred             HHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCC
Confidence            455556666798543 5688888884444444444444    899999999999999999999999998874   45678


Q ss_pred             CCHHHHHHHhhcC--CceEEEEcCC-CCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCc-hh-hhhccCCcEEEE
Q 014492          205 LNVELIADAVERE--KPKCIFLTSP-NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES-RM-EWVKKHDNLIVL  278 (423)
Q Consensus       205 ~d~~~l~~~i~~~--~~~~i~l~~p-~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~-~~~~~~~~~i~i  278 (423)
                      +|+++++++|++.  +.+++++.+| ++.+|.+-+++++.+||+. |+++++|+||........ .. ..+....-+.++
T Consensus       182 id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v  261 (450)
T 3bc8_A          182 TDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFV  261 (450)
T ss_dssp             CCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEE
Confidence            9999999999753  2455555555 4556789999999999998 999999999985432111 11 111112334678


Q ss_pred             ccChhhhcccCcccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCC--
Q 014492          279 RTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVP--  354 (423)
Q Consensus       279 ~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~--  354 (423)
                      .|.+|.+. .....+++.. +++.++++.........+.++.......+.. .+.+++..++..++.+++.+.|++++  
T Consensus       262 ~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~  340 (450)
T 3bc8_A          262 QSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEA  340 (450)
T ss_dssp             EEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence            89999764 4444566665 6677766654431112233333322222221 23355555555667777777776654  


Q ss_pred             -CCeecCCCce--EEEEEeCC-----CCCHHHHHHHHHhCC---cEEE--------------eCCC---CCCCCeEEEEe
Q 014492          355 -FLNPYPSYSN--FILCEVTS-----GMDAKKLKDDLAKMG---VMIR--------------HYNN---KELKGYVRVSV  406 (423)
Q Consensus       355 -~~~~~p~~~~--~~~~~~~~-----~~~~~~l~~~L~~~g---I~v~--------------~~~~---~~~~~~iRis~  406 (423)
                       +..+.....+  -..+.+..     ..|...+.-.+...|   .-+.              .++.   .....+|=+.+
T Consensus       341 ~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~  420 (450)
T 3bc8_A          341 HNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA  420 (450)
T ss_dssp             TTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEEC
T ss_pred             cCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEe
Confidence             4444322211  11222221     235556666665544   3332              1111   12234555544


Q ss_pred             c---ChhhHHHHHHHHhhh
Q 014492          407 G---KPEHTDALMECLMHL  422 (423)
Q Consensus       407 ~---~~~~~~~l~~al~~l  422 (423)
                      +   +.++.++|.++|+++
T Consensus       421 sig~~~~di~~l~~~L~~~  439 (450)
T 3bc8_A          421 AIGMKMQDVDLFIKRLDKC  439 (450)
T ss_dssp             CTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHH
Confidence            3   566777777777754

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.40  E-value=3.9e-12  Score=123.08  Aligned_cols=244  Identities=11%  Similarity=-0.038  Sum_probs=155.6

Q ss_pred             CCCC-CcEEEeCCHHHHHHHHHHHhcCC----CCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHHh
Q 014492          143 GLES-DHILVGCGADELIDLIMRCVLDP----GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAV  214 (423)
Q Consensus       143 g~~~-~~i~~t~G~~~al~~~~~~l~~~----gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i  214 (423)
                      |++. ...++++|+|.++..++.+.+++    +|.|+++.-+|-+....+...|++++.++.   ++..++|++++++++
T Consensus       130 G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI  209 (501)
T 3hl2_A          130 GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKV  209 (501)
T ss_dssp             TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHH
T ss_pred             CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHH
Confidence            8754 46899999997766666656664    499999999999999999999999999984   345789999999999


Q ss_pred             hcC--CceEEEEc-CCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CCCchh-hhhccCCcEEEEccChhhhccc
Q 014492          215 ERE--KPKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRM-EWVKKHDNLIVLRTFSKRAGLA  288 (423)
Q Consensus       215 ~~~--~~~~i~l~-~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~-~~~~~~~~~i~i~S~SK~~g~~  288 (423)
                      ++.  +..++++. .+.|-.|.+-+++++.+||+. |+++++|+||.... +..... ..+.....++++.|.+|.+-++
T Consensus       210 ~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvp  289 (501)
T 3hl2_A          210 QELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP  289 (501)
T ss_dssp             HHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCC
T ss_pred             HhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceee
Confidence            753  23344433 556655677899999999998 99999999998543 111111 1111122557889999987544


Q ss_pred             Ccccccccc-CHHHHHHHHHhcCCCC-CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCC---CeecCCC
Q 014492          289 GLRVGYGAF-PLSIIEYLWRAKQPYN-VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPF---LNPYPSY  362 (423)
Q Consensus       289 G~R~G~i~~-~~~~~~~l~~~~~~~~-~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~p~~  362 (423)
                       +..|.+.. ++++++++.... +.. ...++.......+.- .+.+++..++..++.+++.+.|+++..   ..+....
T Consensus       290 -IGG~ii~~~d~e~l~~~~~~y-PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~  367 (501)
T 3hl2_A          290 -VGGAIIAGFNDSFIQEISKMY-PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTP  367 (501)
T ss_dssp             -SSCEEEEESCHHHHHHHHHTS-CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCT
T ss_pred             -cCceEEEeCCHHHHHHHHHhC-CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCC
Confidence             22233323 677777764432 222 222222222222221 244677788888888888888876421   2332222


Q ss_pred             --ceEEEEEeCC-----CCCHHHHHHHHHhCCc
Q 014492          363 --SNFILCEVTS-----GMDAKKLKDDLAKMGV  388 (423)
Q Consensus       363 --~~~~~~~~~~-----~~~~~~l~~~L~~~gI  388 (423)
                        ..-+.+.+..     +.+...+-..|..++|
T Consensus       368 ~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~v  400 (501)
T 3hl2_A          368 HNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQV  400 (501)
T ss_dssp             TCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTC
T ss_pred             CCceeEEEecccccccccccHHHHHHHHHhcCC
Confidence              2233344431     1224566677766554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	423
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	1e-42
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	2e-41
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	9e-41
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-39
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	2e-37
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	2e-35
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	2e-26
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	7e-25
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	7e-24
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	3e-18
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	2e-14
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	7e-14
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	9e-14
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	3e-13
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	7e-13
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	3e-12
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	1e-10
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	2e-10
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	9e-10
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	4e-09
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	6e-09
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	2e-08
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	1e-07
d1v72a1	345	c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Ps	2e-06
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	0.001
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	0.001
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	0.002
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	0.002

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  153 bits (387), Expect = 1e-42
 Identities = 51/345 (14%), Positives = 96/345 (27%), Gaps = 65/345 (18%)

Query: 123 PYIYPD---PESRRLRAALAKDSGL------ESDHILVGCGADELIDLIMR--------C 165
            Y +       S  L   + +   +      +  +I+ G G  +LI  ++          
Sbjct: 91  SYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTAT 150

Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225
              P  K+V   P + ++                   ++ N     +     +     +T
Sbjct: 151 PDAPESKVVAHAPFYPVFREQTKYFDKKGY------VWAGNAANYVNVSN-PEQYIEMVT 203

Query: 226 SPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA 285
           SPNNP+G + +           ++      Y              K D  I+L T SK  
Sbjct: 204 SPNNPEGLLRHA----------VIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFT 253

Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPYN---VSVAAEVAACAALQNPI------------ 330
           G +G R G+       +          N        ++ +   L+  +            
Sbjct: 254 GHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRD 313

Query: 331 YLEKVKEALIKERERLFKLLKDVPFLN----PYPSYSNFILCEVTSGM----------DA 376
                 + L +    +  LL      +    P   Y N+                   + 
Sbjct: 314 LNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEED 373

Query: 377 KKLKDDLAKMGVMIRHYNNKEL-KGYVRVSVGKP-EHTDALMECL 419
           K          +  ++    E    YVR+S+ K  +  D LM  L
Sbjct: 374 KDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYL 418

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  148 bits (375), Expect = 2e-41
 Identities = 74/371 (19%), Positives = 146/371 (39%), Gaps = 25/371 (6%)

Query: 65  SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFP 123
             +   ++ +KP    +     +++L R+  D+V + A E  +  P  V+EA  + L   
Sbjct: 2   RGLSRRVQAMKPS-ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60

Query: 124 YI-YPDPE-SRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175
              Y  P     LR ALA+         +  +  +V  G  + +  + + +LDPGD+++ 
Sbjct: 61  KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIV 120

Query: 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDF--SLNVELIADAVEREKPKCIFLTSPNNPDGS 233
             P +  Y       G  VV+V    +     + E +  A+   + K + + SPNNP G+
Sbjct: 121 LSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI-TPRTKALVVNSPNNPTGA 179

Query: 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLA 288
           +   E L  +  +       +V DE Y             +   ++ + +   +K   + 
Sbjct: 180 VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239

Query: 289 GLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC------AALQNPIYLEKVKEALIKE 342
           G R+GY   P  +I+ +    +    S                  +  ++E  +EA  + 
Sbjct: 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRR 299

Query: 343 RERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKELKGY 401
           R+ L + L  +      PS + ++L + +    D  +  + L + GV +    +    G+
Sbjct: 300 RDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGH 359

Query: 402 VRVSVGKPEHT 412
           VR+S    E  
Sbjct: 360 VRLSYATSEEN 370

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score =  146 bits (368), Expect = 9e-41
 Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 31/366 (8%)

Query: 64  DSFIRSHLRKLKPYQPILPFEVLSIQLGRKP--EDIVKIDANENPYGPPPEVREALGQLK 121
               R ++R L PYQ             R+      V ++ANE P     ++ +      
Sbjct: 5   TDLARENVRNLTPYQS-----------ARRLGGNGDVWLNANEYPTAVEFQLTQQTLNR- 52

Query: 122 FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181
               YP+ + + +    A+ +G++ + +LV  GADE I+L++R   +PG   +   P   
Sbjct: 53  ----YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY 108

Query: 182 MY-EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-- 238
                 A   G     VP   ++ L+++ I+D  + +  K +++ SPNNP G +IN +  
Sbjct: 109 GMYSVSAETIGVECRTVPTLDNWQLDLQGISD--KLDGVKVVYVCSPNNPTGQLINPQDF 166

Query: 239 -DLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
             LL++     +VV DEAY EF    S   W+ ++ +L +LRT SK   LAGLR G+   
Sbjct: 167 RTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA 226

Query: 298 PLSIIEYLWRAKQPYNV--SVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355
              +I  L +   PY +   VA   A   + Q  + + +    +I ERE L   LK++P 
Sbjct: 227 NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPC 286

Query: 356 LNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVGKPEHTD 413
           +   + S +N+IL        +  +   L   G+++R  N +  L G +R++VG  E + 
Sbjct: 287 VEQVFDSETNYILARFK---ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQ 343

Query: 414 ALMECL 419
            +++ L
Sbjct: 344 RVIDAL 349

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  143 bits (360), Expect = 3e-39
 Identities = 72/355 (20%), Positives = 145/355 (40%), Gaps = 36/355 (10%)

Query: 90  LGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYIYPDPESRRLRAALAK--- 140
           +    +D++ +   E  +  P  ++E        G   +       E   LR A+A+   
Sbjct: 20  IAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLE---LREAIAEKLK 76

Query: 141 ----DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
                       I+V  GA++   + +   L  G++++   P F  Y     + G   V+
Sbjct: 77  KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136

Query: 197 VPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILV 250
           VP   +  F LNV+ +   V  +K + + + SP NP G+++  +DL +I +      ++V
Sbjct: 137 VPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIV 195

Query: 251 VLDEAYTEFSGLESRMEWVKK----HDNLIVLRTFSKRAGLAGLRVGYGAF-----PLSI 301
           + DE Y  F   ++R   +       +  I +  FSK   + G R+G+ A         +
Sbjct: 196 ISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMV 255

Query: 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPS 361
              ++ A  P      A   A    ++   +E++++   + R+ ++K L ++      P 
Sbjct: 256 KFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPK 315

Query: 362 YSNFILCEVT-SGMDAKKLKDDLAK-MGVMIRH--YNNKELKGYVRVSVGKPEHT 412
            + +I   +  +G+ +KK  + + K   V +       K  +GYVR+S       
Sbjct: 316 GAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEK 370

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  137 bits (347), Expect = 2e-37
 Identities = 73/371 (19%), Positives = 150/371 (40%), Gaps = 34/371 (9%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPY 124
           +  + P    L  +  +  +  +  D+    A E  +  P  + EA       G+ ++  
Sbjct: 7   VESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGP 65

Query: 125 IYPDPESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
              +P    LR A+A+           +D+ILV  G  + I  +M  +++PGD+++   P
Sbjct: 66  AAGEPR---LREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
            +  Y     +     V +P   +  F ++ E I  A+   K K +   +P+NP G +  
Sbjct: 123 FWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYT 181

Query: 237 DEDLLKIL----EMPILVVLDEAYTEFSGLESRMEWVKK-----HDNLIVLRTFSKRAGL 287
            +++  I     E  + V+ DE Y +    +++   +       ++  +V   F+K   +
Sbjct: 182 PDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241

Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPI-YLEKVKEALIKERE 344
            G RVG+ A P+ +++   + +     NV   A+  A AA +N    ++++  A  + R 
Sbjct: 242 TGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRR 301

Query: 345 RLFKLLKDVPFLN-PYPSYSNFILCEVT-SGMDAKKLKDDLA-KMGVMIRHYNNKELKGY 401
            +   L  +P L  P P  + ++   +  +G  +     +L  +  V             
Sbjct: 302 YMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDC 361

Query: 402 VRVSVGKPEHT 412
           +R+S      T
Sbjct: 362 IRLSYATDLDT 372

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score =  132 bits (331), Expect = 2e-35
 Identities = 81/340 (23%), Positives = 137/340 (40%), Gaps = 13/340 (3%)

Query: 89  QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147
            LG  P+ ++   AN NP G P  V+ AL   L     YPD +   L  ALA+   + + 
Sbjct: 16  VLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPAS 75

Query: 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207
            IL G G  E I  +   +     + +   P F  Y    A +G  + +   +      +
Sbjct: 76  WILAGNGETESIFTVASGLKPR--RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL 133

Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-----MPILVVLDEAYTEFSGL 262
                        C+FL +PNNP G +     L  I +        L++ +         
Sbjct: 134 TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE 193

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNVSVAAEVA 321
              +  +K + ++ VLR+ +K   + GLR+GY            R +Q P++V+  A +A
Sbjct: 194 TGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAALA 253

Query: 322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381
              ALQ+  + +     L +E  R ++ L  +P L  YP  +N++L       +   L+ 
Sbjct: 254 GEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRC--EREDIDLQR 311

Query: 382 DLAKMGVMIRHYNN--KELKGYVRVSVGKPEHTDALMECL 419
            L    ++IR   N       Y RV++      + L+  L
Sbjct: 312 RLLTQRILIRSCANYPGLDSRYYRVAIRSAAQNERLLAAL 351

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score =  106 bits (265), Expect = 2e-26
 Identities = 98/356 (27%), Positives = 166/356 (46%), Gaps = 39/356 (10%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIY 126
            ++  PY+              +  D   +  NENP+  P ++ +     L        Y
Sbjct: 8   AKRAYPYET-------------EKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRI-Y 53

Query: 127 PDPESRRLRAALAK---DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
            D     L   +        L  +++ VG GADE+I ++M       D+ V  PPT++ Y
Sbjct: 54  YDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCY 109

Query: 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
              A   GA  ++VP   D  +            +   +F+ +PNNP G +   E++ +I
Sbjct: 110 RIFAKAVGAKFLEVPLTKDLRIPEV------NVGEGDVVFIPNPNNPTGHVFEREEIERI 163

Query: 244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           L+    V LDEAY EF G ES ++++KK++NL V+RTFSK   LA  RVGY       I+
Sbjct: 164 LKTGAFVALDEAYYEFHG-ESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFID 222

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS 363
              R + P+NVS  +++ A  AL +    E+  + +++ERER+   L+++ +     S  
Sbjct: 223 AYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGY-RITDSRG 281

Query: 364 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECL 419
           NF+   +    + ++L + L    V +R +        VR+++GK E  D ++  L
Sbjct: 282 NFVFVFM-EKEEKERLLEHLRTKNVAVRSFRE-----GVRITIGKREENDMILREL 331

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  102 bits (255), Expect = 7e-25
 Identities = 65/363 (17%), Positives = 128/363 (35%), Gaps = 19/363 (5%)

Query: 67  IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPY 124
           +   + ++      +  +  +  L +K ED++ + A E  +  P  V E   +   K   
Sbjct: 1   VSRRISEIPIS-KTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV 59

Query: 125 IYPDPE-SRRLRAALAKD------SGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDC 176
            Y DP     LR  +AK         +  D ++V  GA + +      +LDPGD+ IV  
Sbjct: 60  KYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFS 119

Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236
           P   +         G   V     S          + +   K K + + SPNNP G +  
Sbjct: 120 PVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYR 179

Query: 237 DEDLLKILEM---PILVVLDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRAGLAG 289
            E L  ++ +       ++ +   +          +    +  D ++ +  FSK   + G
Sbjct: 180 REFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTG 239

Query: 290 LRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKL 349
            RVGY      +   + + +      +       A     +    + +   + +  + + 
Sbjct: 240 WRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVER 299

Query: 350 LKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKP 409
           LK +      P  + ++  +V  G D K  +  L +  V +   +     G+VR+S    
Sbjct: 300 LKKMGVKFVEPEGAFYLFFKV-RGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATS 358

Query: 410 EHT 412
              
Sbjct: 359 IER 361

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  100 bits (249), Expect = 7e-24
 Identities = 81/360 (22%), Positives = 146/360 (40%), Gaps = 39/360 (10%)

Query: 89  QLGRKPEDIVKI---DANENPYGPPPEVREAL------GQLKFPYIYPDPESRRLRAALA 139
           +L +K   ++++   D  +  + PP  ++EA       G   +      PE   LR A+ 
Sbjct: 24  ELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPE---LRKAIV 80

Query: 140 KDSGLE------SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
           +    +       D + V     E + LI   +LDPGD+I+   P++  Y       G  
Sbjct: 81  EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGK 140

Query: 194 VVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPI 248
            V+    + +              ++ K I + +PNNP G++ + + L +IL    E  I
Sbjct: 141 PVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEI 200

Query: 249 LVVLDEAYTEFSGLESRMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAFP-----LSI 301
            V+ DE Y   +     +      K   +IV+   SK     G R+GY  F      LS 
Sbjct: 201 PVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE 260

Query: 302 IEYLWR--AKQPYNVSVAAEVAACAALQNPI-YLEKVKEALIKERERLFKLLKDVPFLNP 358
           +       A+     +  A+ AA A L  P+ YL++  + L + R+ ++K L ++P ++ 
Sbjct: 261 VREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST 320

Query: 359 Y-PSYSNFILCEVTSGM---DAKKLKDDLAKMGVMIRHYN--NKELKGYVRVSVGKPEHT 412
             P  + +I  ++  G    D + + D L    V+  H +   +   G+ R     P   
Sbjct: 321 TKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEI 380

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 83.6 bits (205), Expect = 3e-18
 Identities = 73/360 (20%), Positives = 139/360 (38%), Gaps = 28/360 (7%)

Query: 71  LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
               K       F  +S  L ++    V +        PPP + EA+ + L     Y  P
Sbjct: 7   TEAAKES----IFPRMS-GLAQRL-GAVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPP 60

Query: 130 E-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
                LR ALA++  +E + ++V  GA E + ++++ ++ PGD++V   P F +Y  DA 
Sbjct: 61  AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAF 120

Query: 189 VNG--AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
           + G  A +V++    +         +     + + + L +P NP G +  + +L  I  +
Sbjct: 121 LAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARL 180

Query: 247 ---PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
                L ++ +   +      R         +    + +  KR    G RVG+   P   
Sbjct: 181 ARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEF 240

Query: 302 IEYLWRAKQPYNVSVAAEV-----AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL 356
           +  L   +Q  + S    +      A    +   + E ++E   + R+ L   L+ +   
Sbjct: 241 MPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLR 300

Query: 357 NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRH----YNNKELKGYVRVSVGKPEHT 412
              P  + F++ E+  G DA +L   + +  V +      Y     K   R +  K E  
Sbjct: 301 VYVPEGTYFLMAEL-PGWDAFRL---VEEARVALIPASAFYLEDPPKDLFRFAFCKTEEE 356

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 71.8 bits (174), Expect = 2e-14
 Identities = 64/383 (16%), Positives = 132/383 (34%), Gaps = 33/383 (8%)

Query: 69  SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYP 127
             +   +   PI      +    ++   I  ++  +     P    E + +       Y 
Sbjct: 3   DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYS 61

Query: 128 DPE-SRRLRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180
                  LR A A          ++ +++LV  G  E I      + +PGD+I+   P +
Sbjct: 62  HSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFY 121

Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240
             Y   A + G  ++ V R+ +    +    ++   E+ K I L++P NP G +   +++
Sbjct: 122 ANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEM 181

Query: 241 LKILE----MPILVVLDEAYTEFSGLESRMEWVKKHDNLIV-LRTFSKRAGLAGLRVGYG 295
             ++E      + +++DE Y+E          +    + +V + + SK+    G RVG  
Sbjct: 182 RYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCL 241

Query: 296 AFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF 355
                 +           ++        +     +            RER+  +LK +  
Sbjct: 242 ITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE 301

Query: 356 LNP----YPSYSNFILCEVTSGMD---AKKLKDD--LAKMGVMIR-----HYNNKELKGY 401
                   PS + +I  E+        A+ +  D  +     M+      +      K  
Sbjct: 302 HGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKE 361

Query: 402 VRVSVGKPEHT-----DALMECL 419
           +R++    +       D LME L
Sbjct: 362 IRIACVLEKDLLSRAIDVLMEGL 384

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score = 70.5 bits (171), Expect = 7e-14
 Identities = 58/337 (17%), Positives = 114/337 (33%), Gaps = 35/337 (10%)

Query: 109 PPPEVREALGQL-----KFPYIYPDPE-SRRLRAALAK------DSGLESDHILVGCGAD 156
           P   +++   ++          Y   +    LR ALA+      D  +    I+   G+ 
Sbjct: 45  PVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQ 104

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-----FSLNVELIA 211
           + +DLI R  L+PGD IV   PT+              + +P                  
Sbjct: 105 QALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEEL 164

Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTE--FSGLESR 265
               +       +++  NP G  ++ +   K+L    E   L+V D  Y+E  +SG  + 
Sbjct: 165 RKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTP 224

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN-----VSVAAEV 320
                     ++      +    G R+G+ A    +I  +  AKQ  +        A   
Sbjct: 225 PIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAW 284

Query: 321 AACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN---PYPSYSNFILCEVTSGMDAK 377
                     ++ K+ E     R+ + + L++          P    F+   +  G+D K
Sbjct: 285 KYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGIDTK 344

Query: 378 KLKDDLAKMGVMIR----HYNNKELKGYVRVSVGKPE 410
            + +     GV        + +++ K  +R++     
Sbjct: 345 LMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVP 381

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score = 70.4 bits (171), Expect = 9e-14
 Identities = 40/383 (10%), Positives = 103/383 (26%), Gaps = 61/383 (15%)

Query: 92  RKPEDIVKIDANENPY-----------GPPPEVREALGQLKFPYI--YPDPE-SRRLRAA 137
                I+++   EN              P     +  G+  F  +  + D       + A
Sbjct: 33  HNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKA 92

Query: 138 LAK--------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
           +              + +H+++  GA    +  + C+ DPG+ ++   P +  ++ D   
Sbjct: 93  MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 152

Query: 190 NGAAVVKVPRKSDFSLNVELIAD------AVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
                +     +  +                E+   +   +   N  +            
Sbjct: 153 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 212

Query: 244 LEMPILVVLDEAYTEFSGLESRMEWVKKH-------------------DNLIVLRTFSKR 284
           L +  +                                            + V+ + SK 
Sbjct: 213 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKD 272

Query: 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEK-----VKEAL 339
            GL G RVG       ++         + +  +      +A+ +   L K       + L
Sbjct: 273 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRL 332

Query: 340 IKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD-------LAKMGVMIRH 392
            + +++L   L+         +   F   ++   + +   + +       + ++ + I  
Sbjct: 333 KQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP 392

Query: 393 YN--NKELKGYVRVSVGKPEHTD 413
            +  +    G+ RV         
Sbjct: 393 GSSCHCTEPGWFRVCFANLPERT 415

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score = 68.5 bits (166), Expect = 3e-13
 Identities = 57/373 (15%), Positives = 111/373 (29%), Gaps = 52/373 (13%)

Query: 88  IQLG----RKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPE-SRRLRAALAK-- 140
           IQ+G    +   D+++     NP        E +   K    + D       R A+AK  
Sbjct: 39  IQMGLAENQLCLDLIEDWIKRNP--KGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFM 96

Query: 141 ------DSGLESDHILVGCGADELIDLIMRCVLDPGDK-IVDCPPTFTMYEFDAAVNGAA 193
                     + + +++  GA    + I+ C+ DPGD  +V  P             G  
Sbjct: 97  EKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ 156

Query: 194 VVKVPRKSDFSLNVELIAD-------AVEREKPKCIFLTSPNN----PDGSIINDEDLLK 242
           ++ +  +S  +  +   A             K K + LT+P+N              L  
Sbjct: 157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSF 216

Query: 243 ILEMPILVVLDEAYTEFSGLESRMEWVK-----------KHDNLIVLRTFSKRAGLAGLR 291
             +  I +V DE Y        +   +              D + ++ + SK  GL G R
Sbjct: 217 TNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFR 276

Query: 292 VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC-----AALQNPIYLEKVKEALIKERERL 346
           VG        +    R    + +                     +L +    L K  +  
Sbjct: 277 VGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHF 336

Query: 347 FKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDD-------LAKMGVMIRHYN--NKE 397
              L+ V       +   F   ++   +       +       +  + + +   +    +
Sbjct: 337 TNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQ 396

Query: 398 LKGYVRVSVGKPE 410
             G+ RV     +
Sbjct: 397 EPGWFRVCFANMD 409

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 67.3 bits (162), Expect = 7e-13
 Identities = 34/338 (10%), Positives = 81/338 (23%), Gaps = 25/338 (7%)

Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADEL 158
            N+   G  P++ + + +  +     Y  D    +    + +        +    G  + 
Sbjct: 5   VNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQT 64

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREK 218
             +     L P + ++             A+       V              ++   E 
Sbjct: 65  NLIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHEN 124

Query: 219 PKCIFLTSPNNPDGSIIN----------DEDLLKILEMPILVVLDEAYTE---FSGLESR 265
                +        +             ++      E  + + LD A       S +   
Sbjct: 125 RSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL 184

Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACA 324
                     +     +K  G+ G   +           +L + +               
Sbjct: 185 TLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFE 244

Query: 325 ALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA 384
            L       ++     K    L   L+       +PS SN +   +       +L +D  
Sbjct: 245 VLMKDNLFFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPIL-ENTMIAELNNDFD 303

Query: 385 KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 419
              V        +    +R+      + +     +E L
Sbjct: 304 MYTVEPLK----DGTCIMRLCTSWATEEKECHRFVEVL 337

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score = 65.4 bits (158), Expect = 3e-12
 Identities = 43/306 (14%), Positives = 83/306 (27%), Gaps = 34/306 (11%)

Query: 97  IVKIDANENPYGPP---PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGC 153
           I    +  + Y P     E R    +L      P  + +R+    +              
Sbjct: 60  IANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQS------LGGTGALR 113

Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213
              E +        +    +    PT+  +       G   ++  R  D       +   
Sbjct: 114 IGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGF 173

Query: 214 VEREK-----PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFS--GL 262
           +   +        +     +NP G+    E   +I  +     +    D AY  F+   L
Sbjct: 174 LSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNL 233

Query: 263 E----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAA 318
           E    +   +V +   L   ++FSK  GL   RVG         + + R        V  
Sbjct: 234 EKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRV 293

Query: 319 EV---------AACAALQNPIYLEKVKEALIKERERLFKLLKD-VPFLNPYPSYSNFILC 368
                           L +P    +    +    +R+  +  +    L    +   +   
Sbjct: 294 TWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHI 353

Query: 369 EVTSGM 374
               GM
Sbjct: 354 TDQIGM 359

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score = 60.8 bits (146), Expect = 1e-10
 Identities = 54/313 (17%), Positives = 89/313 (28%), Gaps = 59/313 (18%)

Query: 99  KID----ANENPYGPPPE---VREALGQL----KFPYIYPDPE-SRRLRAALAK------ 140
           K+D    A  +  G P     V+ A   +     + + Y        L +  AK      
Sbjct: 31  KVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQ 90

Query: 141 -DSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK 196
            D+  E   I V          I         P   +    PT+  +       G     
Sbjct: 91  SDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTAT 150

Query: 197 VPRKS----DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PI 248
            P  +       LN  L A     E    +  +  +NP G     E  ++I++       
Sbjct: 151 YPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNH 210

Query: 249 LVVLDEAYTEFS---------GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299
           + + D AY  F+          +   +E +     + V ++F+K AG+ G RVG     L
Sbjct: 211 IALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLAL 270

Query: 300 SIIEYLWRAKQP-------------YNVSVAAEVAACAALQNP-------IYLEKVKEAL 339
           +        K                N            L+ P         +  +   +
Sbjct: 271 TKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRI 330

Query: 340 IKERERLFKLLKD 352
            K R  L   L  
Sbjct: 331 TKMRHALRDHLVK 343

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score = 59.6 bits (143), Expect = 2e-10
 Identities = 33/273 (12%), Positives = 72/273 (26%), Gaps = 26/273 (9%)

Query: 101 DANENPYGPPPEVREALGQL---KFPYIYPDPE-SRRLRAALAK-------DSGLESDHI 149
           DA  +       V  A  ++   +    Y         + A+ +        S   +   
Sbjct: 38  DATGHTP-IMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLA 96

Query: 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE- 208
            VG        L +  + +P  ++    PT+  +       G  V         +  V+ 
Sbjct: 97  TVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF 156

Query: 209 ---LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSG 261
                  A  ++    +     +NP G+ +  +   +I     +   L ++D AY  F  
Sbjct: 157 EGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGD 216

Query: 262 LE-----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV 316
                         +   +++  + SK  G+   R G      +       A+       
Sbjct: 217 GLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLN 276

Query: 317 AAE-VAACAALQNPIYLEKVKEALIKERERLFK 348
                         +        L  +     +
Sbjct: 277 RQTYSFPPFHGAKIVSTVLTTPELRADWMAELE 309

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 57.5 bits (137), Expect = 9e-10
 Identities = 49/330 (14%), Positives = 95/330 (28%), Gaps = 23/330 (6%)

Query: 108 GPPPEVREALGQLKF--PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165
            P  E+R+A+ Q +        DP    L    A+  G E   + V  G       IM  
Sbjct: 11  KPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGKE-AALFVPSGTMGNQVSIMAH 69

Query: 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN------VELIADAVEREKP 219
                + I++       YE  A    + V+  P                +    +   + 
Sbjct: 70  TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRT 129

Query: 220 KCIFLTSPNNPDGSII-NDEDLLKILEMP-----ILVVLDEAYTEFSGLESRMEWVKKHD 273
             I + + +N  G  +   E++ +I  +       + +        S             
Sbjct: 130 SLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY 189

Query: 274 NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333
              V+   SK        V  G           R      +  A  +AA   +     ++
Sbjct: 190 ADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVD 249

Query: 334 KVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRH 392
           ++KE     R    KL +    +NP    +N ++       ++A    + L   GV+   
Sbjct: 250 RLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANA 309

Query: 393 YNNKELKGYVRVSVG---KPEHTDALMECL 419
            +       +R+           +  +   
Sbjct: 310 VS----DTEIRLVTHKDVSRNDIEEALNIF 335

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score = 55.8 bits (133), Expect = 4e-09
 Identities = 48/311 (15%), Positives = 86/311 (27%), Gaps = 38/311 (12%)

Query: 101 DANENPYGPPPEVREALGQL---KFPYIYPDPE-SRRLRAALAK----------DSGLES 146
           D           V++A   L   +    Y   +          +          +     
Sbjct: 38  DETGKTP-VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRAR 96

Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
                G      +            ++    P++  ++      G  V +       +  
Sbjct: 97  TAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHT 156

Query: 207 VELIADAVERE----KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE 258
           ++  A              +F    +NP G     E    + ++      L + D AY  
Sbjct: 157 LDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQG 216

Query: 259 F-SGLE----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-- 311
           F  GLE        +   H  LIV  ++SK  GL   RVG      +  E + RA     
Sbjct: 217 FARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK 276

Query: 312 -------YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD-VPFLNPYPSYS 363
                   N            L N       ++ L   R+R+ ++ +  V  L    +  
Sbjct: 277 AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANR 336

Query: 364 NFILCEVTSGM 374
           +F      +GM
Sbjct: 337 DFSFIIKQNGM 347

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 6e-09
 Identities = 70/380 (18%), Positives = 131/380 (34%), Gaps = 62/380 (16%)

Query: 95  EDIVKIDANENPYGPPPEVREALGQL----KFPYIYPDPE-SRRLRAALA----KDSGLE 145
            D+V +      + PP    EA             Y        L   LA    +  G E
Sbjct: 25  HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQE 84

Query: 146 SD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
            D   ++LV  G    +    + ++D GD+++   P F  YE    + G   V V  K  
Sbjct: 85  IDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPG 144

Query: 203 FSLNVELIADA-----------VEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMP 247
              N EL + +               + K + L +PNNP G + + E+L  +     +  
Sbjct: 145 PIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHD 204

Query: 248 ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++ + DE Y    + G +  S        +  + + +  K     G +VG+   P  I++
Sbjct: 205 VVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMK 264

Query: 304 ----------YLWRAKQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV 353
                     +    +    V+ + E       Q   Y  +  +A+ + R+ + + L+ V
Sbjct: 265 HLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 324

Query: 354 PFLNPYPSYSNFILCEVT--------------SGMDAKKLKDDLAKMGVMI-------RH 392
                 P  S F++ +++                 D + +K  +   G++          
Sbjct: 325 GLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV 384

Query: 393 YNNKELKGYVRVSVGKPEHT 412
            + K    Y+R    K E T
Sbjct: 385 PHQKHFDHYIRFCFVKDEAT 404

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 53.6 bits (127), Expect = 2e-08
 Identities = 64/372 (17%), Positives = 128/372 (34%), Gaps = 37/372 (9%)

Query: 72  RKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL------GQLKFPYI 125
            KL      + F  +S  L ++    + +      +  P  ++E L      G  ++  +
Sbjct: 6   SKLPQLGTTI-FTQMS-ALAQQH-QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPM 62

Query: 126 YPDPESRRLRAALA----KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
                   LR A+A    +  G + D    I V  GA E +   +  ++  GD+++   P
Sbjct: 63  TGVQA---LREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDP 119

Query: 179 TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238
           ++  Y    A++G  V ++  +            A+  E+ + + L +P+NP  ++    
Sbjct: 120 SYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 179

Query: 239 DLLKILEMP--------ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
           D   + +             V +       G  S +   +  +  + + +F K   + G 
Sbjct: 180 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGW 239

Query: 291 RVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLEKVK---EALIKERERLF 347
           +VGY   P  I   + +  Q    SV        A       E      +   ++R+ L 
Sbjct: 240 KVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILV 299

Query: 348 KLLKD--VPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRH----YNNKELKG 400
             L +  +  L    +Y   +     S +D  +    L  + GV          +     
Sbjct: 300 NALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHK 359

Query: 401 YVRVSVGKPEHT 412
            +R+   K E T
Sbjct: 360 LIRLCFAKKEST 371

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 51.0 bits (120), Expect = 1e-07
 Identities = 57/335 (17%), Positives = 116/335 (34%), Gaps = 29/335 (8%)

Query: 107 YGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAK------DSGLESDHILVGCGADEL 158
           +   P + EAL Q L    + Y   ++    AA+A        + ++S  ++ G     +
Sbjct: 11  FATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYM 70

Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVE 215
           +  ++R   + G+ +V   P +  +      N   V+ V  +     +  ++  +   + 
Sbjct: 71  VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLA 130

Query: 216 REKPKCIFLTSPNNPDGSIINDED----LLKILEMPILVVLDEAYTEFSGLESRM--EWV 269
           + + K + L SP NP G +   ++            + V+ DE + +    E        
Sbjct: 131 KPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN 190

Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGYGAFP--LSIIEYLWRAKQPYNVSVAAEVAACAALQ 327
               +  +L + SK   +  L   YG      S   YL   K    +S  + +A  A + 
Sbjct: 191 VARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIA 250

Query: 328 NPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY------SNFILCEVT-SGMDAKKLK 380
                    +AL    +     + D                +     ++    +D   L+
Sbjct: 251 AYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ 310

Query: 381 DDLA-KMGVMIRH--YNNKELKGYVRVSVGKPEHT 412
             L  +  V I       +E +G+VR++ G P   
Sbjct: 311 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSK 345

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Length = 345

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

 Score = 47.1 bits (110), Expect = 2e-06
 Identities = 42/341 (12%), Positives = 91/341 (26%), Gaps = 30/341 (8%)

Query: 102 ANENPYGPPPEVREALGQ--LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCG--AD 156
           +++N  G  PEV +AL +        Y  D  + +++    +    + +  LV  G  A+
Sbjct: 8   SSDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAAN 67

Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
            L    M                          +  A +         L++  + +    
Sbjct: 68  ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTRE 127

Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAY---------TEFSGLESRME 267
           +                      +  + E+  +  + ++             + L S   
Sbjct: 128 KVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC 187

Query: 268 WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW------RAKQPYNVSVAAEVA 321
              +      +   S  A   G+         +            RA    +        
Sbjct: 188 SPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQ 247

Query: 322 ACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKD 381
             A L + ++L   ++A    +     L           + +N + C +        + D
Sbjct: 248 IDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRL-----DSAMID 302

Query: 382 DLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL 419
            L K G     Y+++     VR         E  D L+  +
Sbjct: 303 ALLKAGFGF--YHDRWGPNVVRFVTSFATTAEDVDHLLNQV 341

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.0 bits (89), Expect = 0.001
 Identities = 53/342 (15%), Positives = 103/342 (30%), Gaps = 40/342 (11%)

Query: 109 PPPEVREALGQL-----KFPYIYPDPE-SRRLRAALAKD-------SGLESDHILVGCGA 155
           P  E+ E   ++      +   Y   E    L+  + K        +GL+ D+++   G+
Sbjct: 54  PRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGS 113

Query: 156 DELIDLIMRCVLDPGDKIVDCP-------PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
            + +DLI +  LD     V            F  Y  +  V       +          E
Sbjct: 114 QQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSE 173

Query: 209 LIADAVEREKPKCIFLTSPNNP------DGSIINDEDLLKILEMPILVVLDEAYTEFSGL 262
              +   ++      +++ +NP              ++ +  ++ I+         + G 
Sbjct: 174 FDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE 233

Query: 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322
                +       +VL     +    GLR+G  A     I  + +AKQ  ++   A    
Sbjct: 234 TVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHR 293

Query: 323 CAALQNPIYLEKVKEALIKER---------ERLFKLLKDVPFLNPY-PSYSNFILCEVTS 372
            AA     Y    +     E            L +   D+P +         FI   +  
Sbjct: 294 LAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE 353

Query: 373 GMDAKKLKDDLAKMGVMIRH----YNNKELKGYVRVSVGKPE 410
           G D  ++ +   +  V            E    +R+S   P 
Sbjct: 354 GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPP 395

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 60/379 (15%), Positives = 119/379 (31%), Gaps = 62/379 (16%)

Query: 95  EDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPE-SRRLRAALA----KDSGL 144
              + +      Y  P     AL             Y       RL  AL+    +    
Sbjct: 26  YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDR 85

Query: 145 E---SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS 201
                  +LV  GA E +   ++  +D GD+++   P F  YE      G     +P K 
Sbjct: 86  TINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKP 145

Query: 202 D----------FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI--- 248
           +          + L+   +      EK K I + +P+NP G +++  +L  +  +     
Sbjct: 146 NKTGGTISSADWVLDNNELEAL-FNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWN 204

Query: 249 LVVLDEAYTEFSGLESR-----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
           ++ + +   E    E              +  I + +  K   L G ++G+   P ++++
Sbjct: 205 VLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLK 264

Query: 304 YLWRAKQPYNVSVAAEVAACAALQNP----------IYLEKVKEALIKERERLFKLLKDV 353
            L    Q    + A  +    A+              Y   +   L+ +R+ +   L +V
Sbjct: 265 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 324

Query: 354 PFLNPYPSYSNFILCEVTSGMDAKKLKDD-------------LAKMGVMI-------RHY 393
                 P    F++ + +S      L  +                +G+            
Sbjct: 325 GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEP 384

Query: 394 NNKELKGYVRVSVGKPEHT 412
           N    + +VR    K +  
Sbjct: 385 NKHLGEDFVRYCFFKKDEN 403

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score = 37.9 bits (86), Expect = 0.002
 Identities = 43/363 (11%), Positives = 109/363 (30%), Gaps = 36/363 (9%)

Query: 83  FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAAL 138
           ++++  Q      ++V +   +  +  PPE+ E     L +    Y  P  E    +  +
Sbjct: 19  WDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGPTEE---YKKTV 75

Query: 139 AK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNG 191
            K         +++D I+   G    +   +R    PGD ++      +  +        
Sbjct: 76  KKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQER 135

Query: 192 AAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPIL 249
             +     + D    ++ + +    + +  K +   SP+NP G +   ++L KI ++ + 
Sbjct: 136 KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLK 195

Query: 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309
             L     E         +       I  +   K          +    + +   + +  
Sbjct: 196 SDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP 255

Query: 310 QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN------------ 357
                   +  A        +  +  +    +  + L   +K +                
Sbjct: 256 DIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHP 315

Query: 358 ----PYPSYSNFILCEVTS-GMDAKKLKDDLA-KMGVMIRHYN--NKELKGYVRVSVGKP 409
               P    +     +  +  MD K +++ +  K  +             G+ R+++  P
Sbjct: 316 EIKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP 375

Query: 410 EHT 412
              
Sbjct: 376 SSV 378

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 37.9 bits (86), Expect = 0.002
 Identities = 50/386 (12%), Positives = 117/386 (30%), Gaps = 51/386 (13%)

Query: 76  PYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREAL-------GQLKFPYIYPD 128
            + PI      + +    P+ I+K+   +           A           +    Y  
Sbjct: 12  VFNPIRTV-SDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFP 70

Query: 129 PE-SRRLRAALAK------------DSGLESDHILV-GCGADELIDLIMRCVLDPGDKIV 174
              S   R A+A              S +  D++++   G+  ++  I          +V
Sbjct: 71  TVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALV 130

Query: 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234
             P          A          R  +           ++ +K K + +T+P+NP GS 
Sbjct: 131 PQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSN 190

Query: 235 INDEDLLKILEMP----ILVVLDEAYTEFSG-------LESRMEWVKKHDNLIVLRTFSK 283
            + + +  I+ +     + +  DE Y              + +   +     ++L   +K
Sbjct: 191 FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK 250

Query: 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQPY---------NVSVAAEVAACAALQNPIYLEK 334
              + G R+G+  +           +               V A +          +L++
Sbjct: 251 NLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQ 310

Query: 335 VKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVTSGMDAKKLKDD-------LAKM 386
           +   + +    L+  + +   L P  P  + +++  +      + +K D       L + 
Sbjct: 311 IVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRI-DLEKYRDIKTDVEFFEKLLEEE 369

Query: 387 GVMIRHYNNKELKGYVRVSVGKPEHT 412
            V +         G+ R++  +P   
Sbjct: 370 NVQVLPGTIFHAPGFTRLTTTRPVEV 395

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	423
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.95
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.95
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.95
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.94
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.94
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.93
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.93
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.93
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.92
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.92
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.9
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.89
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.89
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.89
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.85
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.84
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.84
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.84
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.83
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.82
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.81
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.8
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.8
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.79
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.78
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.78
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.76
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.75
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.75
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.75
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.74
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.73
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.73
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.72
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.72
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.71
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.7
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.69
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.68
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.68
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.67
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.66
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.65
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.64
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.64
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.62
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.61
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.6
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.59
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.58
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.56
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.55
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.52
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.51
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.49
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.44
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.4
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.27
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.15

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.3e-53  Score=412.09  Aligned_cols=352  Identities=23%  Similarity=0.352  Sum_probs=296.2

Q ss_pred             HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCC-cchHHHHHHHHHHh--
Q 014492           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS--  142 (423)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y~~-~g~~~lr~~ia~~~--  142 (423)
                      ++++.+++|+ +...+...++++...+.++|+|+.|++++++|+++++++.+ +.. ..+|++ .|.++||+++++++  
T Consensus         5 ~~r~~~~~~s-~~~~i~~~a~~~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~~~~   83 (382)
T d1b5pa_           5 SRRVQAMKPS-ATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRR   83 (382)
T ss_dssp             CHHHHHCCCC-HHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCC-HHHHHHHHHHHHHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHhhhhh
Confidence            4456667776 34445555666677788999999999999999999999877 332 367854 58999999999987  


Q ss_pred             ----CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhc
Q 014492          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER  216 (423)
Q Consensus       143 ----g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~  216 (423)
                          ++++++|++|+|+++++..++++++++||.|++++|+|..|...++.+|++++.+|.+  +++.+|++++++.+. 
T Consensus        84 ~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-  162 (382)
T d1b5pa_          84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-  162 (382)
T ss_dssp             TTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-
T ss_pred             hcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-
Confidence                5688999999999999999999999999999999999999999999999999999853  567899999999986 


Q ss_pred             CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchh-hhhccCCcEEEEccChhhhcccCcc
Q 014492          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAGLR  291 (423)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~g~~G~R  291 (423)
                      ++++++++||||||||.+++.+++++|++.    +++||+||+|.++.+++... ......+++++++|+||.|+++|+|
T Consensus       163 ~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR  242 (382)
T d1b5pa_         163 PRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWR  242 (382)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGC
T ss_pred             CCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCcHhh
Confidence            789999999999999999999999999875    99999999999988655332 2223468999999999999999999


Q ss_pred             ccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE
Q 014492          292 VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN----PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF  365 (423)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~  365 (423)
                      +||+++++++++.+.+....  ...+.+.|.++..++.+    ..+.+..++.++++++.+.+.+.+.+.....|++|+|
T Consensus       243 ~G~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~gg~~  322 (382)
T d1b5pa_         243 IGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFY  322 (382)
T ss_dssp             CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTE
T ss_pred             eEEEEECHHHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcCCeEecCCceEE
Confidence            99999999999988766543  56677888777777765    2456677888899999999999887755567899999


Q ss_pred             EEEEeCC-CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          366 ILCEVTS-GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       366 ~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      +|+++++ ..+...+.+.|.++||.+.||..++.++++||+++..+  ++|.+++++|+
T Consensus       323 ~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~~~--e~l~~al~rl~  379 (382)
T d1b5pa_         323 VLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYATSE--ENLRKALERFA  379 (382)
T ss_dssp             EEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCSCH--HHHHHHHHHGG
T ss_pred             EeEeCCCCCCCHHHHHHHHHHCCEEEEeCcccCCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence            9999953 56788899999999999999988888899999998754  67999999874

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-52  Score=405.00  Aligned_cols=342  Identities=32%  Similarity=0.553  Sum_probs=297.6

Q ss_pred             CCCchhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHH
Q 014492           61 LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAK  140 (423)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~  140 (423)
                      ++...++++.+++++||++.+       +.|  ....|+|+.|+||+++++.+.+     ...++||+++..+||+++|+
T Consensus         2 ~~~~~l~~~~i~~~~~y~~~~-------~~~--~~~~i~L~~ne~p~~~~~~~~~-----~~l~rYPd~~~~~Lr~~ia~   67 (354)
T d1fg7a_           2 VTITDLARENVRNLTPYQSAR-------RLG--GNGDVWLNANEYPTAVEFQLTQ-----QTLNRYPECQPKAVIENYAQ   67 (354)
T ss_dssp             CCHHHHSCHHHHHCCCCCCCC-------CCT--TTCSEECSSCCCSSCCCCCCCC-----CCTTSCCCSSCHHHHHHHHH
T ss_pred             cChHHhhChhhccCCCCCchh-------hcC--CCCCEEeeCCCCCCCCCHHHHH-----HHHhcCCCCcHHHHHHHHHH
Confidence            345667789999999997543       222  2456999999999988764422     12368999988999999999


Q ss_pred             HhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC-eEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492          141 DSGLESDHILVGCGADELIDLIMRCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP  219 (423)
Q Consensus       141 ~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (423)
                      ++|+++++|++|+|+++++.++++++++||| .|+++.|+|..|...++..|.+++.++.+++|.+|+++++..+.  ++
T Consensus        68 ~~gv~pe~I~it~Gs~eai~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~~~--~~  145 (354)
T d1fg7a_          68 YAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GV  145 (354)
T ss_dssp             HHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT--TE
T ss_pred             HhCCChHHeeeccCchHHHHHHHHHhhccccccccccccccccchhhhhccCceeeccccccccccchhhhhhccc--cc
Confidence            9999999999999999999999999999998 58889999999999999999999999988899999999998774  79


Q ss_pred             eEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccc
Q 014492          220 KCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA  296 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~  296 (423)
                      ++|++|+||||||.+++.++++.+++.   +.++|+||+|.+|.++..........+++++++||||.||++|+|+||++
T Consensus       146 ~~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i  225 (354)
T d1fg7a_         146 KVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL  225 (354)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEE
T ss_pred             ceeeccCCCccceeEeeecccccccccccccccccccccchhhccccccchhhcccccceEEeCCccccCCCcccccccc
Confidence            999999999999999999998888764   89999999999988655555555678999999999999999999999999


Q ss_pred             cCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCCC
Q 014492          297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTSG  373 (423)
Q Consensus       297 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~~  373 (423)
                      +++++++.+.+...+++++.+++.++..++.+.  .+.....+++.++|+++.+.|.+++++ .+.|++++|+|++++  
T Consensus       226 ~~~~~i~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~--  303 (354)
T d1fg7a_         226 ANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--  303 (354)
T ss_dssp             ECHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--
T ss_pred             ccchhhhhhhhhcCccchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCC--
Confidence            999999999999999999999888888887764  345667778889999999999999876 468999999999997  


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCC-CCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNN-KELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~-~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                       ++.++++.|.++||+|++++. ++.++|+|||++++++++++.++|+.
T Consensus       304 -~~~~~~~~L~~~gIlvr~~~~~~~~~~~lRisigt~ee~~~~l~aLka  351 (354)
T d1fg7a_         304 -ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRA  351 (354)
T ss_dssp             -THHHHHHHHHHTTEECEECTTSTTCTTEEEEECCCHHHHHHHHHHHHT
T ss_pred             -CHHHHHHHHHHCCcEEecCCCCCCCCCEEEEEeCCHHHHHHHHHHHhh
Confidence             678999999999999998876 56789999999999999999999985

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=1.5e-52  Score=408.86  Aligned_cols=351  Identities=21%  Similarity=0.316  Sum_probs=298.8

Q ss_pred             HHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCC-CcchHHHHHHHHHHh--
Q 014492           68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KF-PYIYP-DPESRRLRAALAKDS--  142 (423)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~-~~g~~~lr~~ia~~~--  142 (423)
                      +.++..++|+ +...+...++++...+.++|+|+.|++++++|+.+++++.+. .. ..+|+ ..|.++||+++++++  
T Consensus         4 ~~~~~~~~~s-~~~~i~~~a~~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~   82 (388)
T d1j32a_           4 AARVESVSPS-MTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQR   82 (388)
T ss_dssp             CHHHHTSCCC-SSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred             hhHhhcCCcC-HHHHHHHHHHHHHHCCCCeEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            3456778887 455677778888888889999999999999999999998763 22 25684 458999999999986  


Q ss_pred             ----CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhc
Q 014492          143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER  216 (423)
Q Consensus       143 ----g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~  216 (423)
                          ++++++|++|+|+++++..+++++++|||+|++++|+|+.|...++..|++++.++..  ++|.+|++++++.+. 
T Consensus        83 ~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~-  161 (388)
T d1j32a_          83 DNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-  161 (388)
T ss_dssp             HHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-
T ss_pred             hcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-
Confidence                4678999999999999999999999999999999999999999999999999999853  567899999999997 


Q ss_pred             CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhh---h--ccCCcEEEEccChhhhcc
Q 014492          217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEW---V--KKHDNLIVLRTFSKRAGL  287 (423)
Q Consensus       217 ~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~---~--~~~~~~i~i~S~SK~~g~  287 (423)
                      +++++++++|||||||.+++.+++++|++.    +++||+||+|.++.+++.....   .  ...+++++++||||.|++
T Consensus       162 ~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~  241 (388)
T d1j32a_         162 PKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM  241 (388)
T ss_dssp             TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTC
T ss_pred             CCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhc
Confidence            789999999999999999999999999875    9999999999988865432211   1  123689999999999999


Q ss_pred             cCccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCc
Q 014492          288 AGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYS  363 (423)
Q Consensus       288 ~G~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~  363 (423)
                      +|+|+||+++++++++.+.+...  ..+.+...|.++..++.+ .+|+++.++.++++++.+.+.|++++++. ..|++|
T Consensus       242 ~GlRvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~gg  321 (388)
T d1j32a_         242 TGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGA  321 (388)
T ss_dssp             TTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBT
T ss_pred             chhHeEEEEECHHHHHHHHHhhhhccccccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEecCCCce
Confidence            99999999999999998877654  357788899888888865 57899999999999999999999886665 457789


Q ss_pred             eEEEEEeCC-CCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          364 NFILCEVTS-GMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       364 ~~~~~~~~~-~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|+|+++++ +.+..++++.|. ++||.+.||..++.++|+||+++.++  ++|.+++++|
T Consensus       322 ~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~--e~l~~al~rl  380 (388)
T d1j32a_         322 FYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDL--DTIKRGMERL  380 (388)
T ss_dssp             TEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             EEEEEECCCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeCCH--HHHHHHHHHH
Confidence            999999974 567888988876 78999999988888999999998644  6688888876

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=1.1e-49  Score=384.18  Aligned_cols=338  Identities=26%  Similarity=0.404  Sum_probs=290.9

Q ss_pred             CCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHH
Q 014492           79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE  157 (423)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~  157 (423)
                      ++..+...++++|.++.++|||+.|+|++++++.+++++.+. ....+||+++..+||+++|+++|+++++|++|+|+++
T Consensus         6 hgg~~~~~~~~~g~~p~~~idls~~~np~~~p~~~~~a~~~~~~~~~~Yp~~~~~~Lr~aia~~~~v~~~~I~~~~g~~~   85 (355)
T d1lc5a_           6 HGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASWILAGNGETE   85 (355)
T ss_dssp             SSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHH
T ss_pred             CCCHHHHHHHHhCCChhheEEccCCCCCCCCCHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHhCCCHHHEEecccHHH
Confidence            355677889999999999999999999999999999999873 3446799988899999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++..++..+.  ++.+++..|.|..|.......+++++.+|.+  +++.++ +.+++.+. .++++|+++|||||||.++
T Consensus        86 ~~~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~~~v~l~nP~NPtG~~~  161 (355)
T d1lc5a_          86 SIFTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLP  161 (355)
T ss_dssp             HHHHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCC-TTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccc-cccceeeeecccCcccccc
Confidence            9998887653  4556667899999998888899999999854  445555 45566665 7899999999999999999


Q ss_pred             CHHHHHHHHcC----CCEEEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCHH-HHHHHHHhc
Q 014492          236 NDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWRAK  309 (423)
Q Consensus       236 ~~~~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~  309 (423)
                      +.+++++|++.    ++++|+||+|.+|.+... ........+++++++|+||.||++|+|+||++++.+ +.+.+.+..
T Consensus       162 ~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~~~~~~~~~  241 (355)
T d1lc5a_         162 ERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQ  241 (355)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHS
T ss_pred             hhhhhhhhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccccccceeccchhhhHHHHhhc
Confidence            99999999875    999999999999876543 333344578999999999999999999999999755 556677777


Q ss_pred             CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          310 QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       310 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                      .+++.+.+++.++..++++.+++.+.+++++++++++.+.|.+++++.+.|++++|+|++++  .++.++++.|+++||.
T Consensus       242 ~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~f~~~~~~--~~~~~~~~~L~~~gv~  319 (355)
T d1lc5a_         242 MPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCE--REDIDLQRRLLTQRIL  319 (355)
T ss_dssp             CTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEES--CTTCCHHHHHHTTTEE
T ss_pred             CCccccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhcCCcEECCCCCEEEEEECC--CCHHHHHHHHHHCCcE
Confidence            77899999999999999999999999999999999999999999888888999999999997  3667899999999999


Q ss_pred             EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |++++.+  ..++|+||+++++++++++.++|+++
T Consensus       320 vr~~~~f~~~~~~~iRis~~~~~e~~~li~aL~~i  354 (355)
T d1lc5a_         320 IRSCANYPGLDSRYYRVAIRSAAQNERLLAALRNV  354 (355)
T ss_dssp             CEECTTSTTCCTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred             EEeCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence            9998763  34689999999999999999999876

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=7.8e-50  Score=389.72  Aligned_cols=325  Identities=23%  Similarity=0.370  Sum_probs=275.7

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CC-CCCCCC-cchHHHHHHHHHHh-------CCCCCcEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KF-PYIYPD-PESRRLRAALAKDS-------GLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~-~~~Y~~-~g~~~lr~~ia~~~-------g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +++|+|+.|++++++|+.+++++.+. .. ..+|++ .|..+||+++++++       ..++++|++|+|+++++..++.
T Consensus        25 ~dvi~l~~g~p~~~~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~  104 (388)
T d1gdea_          25 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLS  104 (388)
T ss_dssp             TTCEECCCCSCCSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHT
T ss_pred             CCeEECCCCCCCCCCCHHHHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHHHhhccccCCChheeeeccCcchHHHHHHH
Confidence            57899999999999999999988763 22 357854 58999999999986       2456799999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK  242 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~  242 (423)
                      ++++|||+|+++.|+|..|...++..|++++.+|.+  ++|++|++++++.+. ++++++++||||||||.+++.+++++
T Consensus       105 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~P~NPtG~~~s~~~~~~  183 (388)
T d1gdea_         105 AFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEE  183 (388)
T ss_dssp             TTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhCc-cCCeEEEECCCcCCCCCcCCHHHHHH
Confidence            999999999999999999999999999999999953  578999999999997 68999999999999999999999999


Q ss_pred             HHcC----CCEEEEccCCccccCCCch---hhhh-ccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--C
Q 014492          243 ILEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--Y  312 (423)
Q Consensus       243 i~~~----~~~li~Deay~~~~~~~~~---~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~  312 (423)
                      |++.    +++||+||+|.++.+.+..   .... ...+++++++||||.||++|+|+||+++++++++.+.+....  +
T Consensus       184 l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ii~~~~~~~~~~~~~~~~~~  263 (388)
T d1gdea_         184 IADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNAT  263 (388)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEEEEeeccchhhhhhccccccc
Confidence            8874    9999999999998765432   2222 235789999999999999999999999999999888876544  5


Q ss_pred             CCcHHHHHHHHHHhCChH---HHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC-CCCHHHHHHHHH-hCC
Q 014492          313 NVSVAAEVAACAALQNPI---YLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS-GMDAKKLKDDLA-KMG  387 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~-~~~~~~l~~~L~-~~g  387 (423)
                      +.+.+.|.++..++.++.   +++..++.++++++.+.+.|...++....|++|+|+|+++++ +.++.++++.|. ++|
T Consensus       264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~ll~e~g  343 (388)
T d1gdea_         264 CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEAR  343 (388)
T ss_dssp             SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTC
T ss_pred             cccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhccccccCCCceEEEEEECCCCCCCHHHHHHHHHHhCC
Confidence            678889999999998854   456777888899999999998877655678999999999974 678999998876 789


Q ss_pred             cEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.++||..+  ..++|+||+++..+  ++|.+++++|
T Consensus       344 V~v~PG~~F~~~~~~~iRis~~~~~--e~l~~al~rL  378 (388)
T d1gdea_         344 VAVVPGSAFGKAGEGYVRISYATAY--EKLEEAMDRM  378 (388)
T ss_dssp             EECEEGGGGCGGGTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             EEEEechhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            999998763  34789999998654  5677777765

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.1e-48  Score=368.67  Aligned_cols=315  Identities=30%  Similarity=0.477  Sum_probs=273.4

Q ss_pred             hCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCC--CCCCCcchHHHHHHHHHHhC---CCCCcEEEeCCHHHHHHHHH
Q 014492           90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIM  163 (423)
Q Consensus        90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~Y~~~g~~~lr~~ia~~~g---~~~~~i~~t~G~~~al~~~~  163 (423)
                      +...++|+|+|+.|+|++++|+.+.+++.+ +...  ++||+.|.++||++++++++   +++++|++|+|+++++.+++
T Consensus        14 ~~~~~~d~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~yp~~g~~~Lr~aia~~~~~~~v~~d~I~it~G~~~~l~~l~   93 (334)
T d2f8ja1          14 YETEKRDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMM   93 (334)
T ss_dssp             CCCCCCCSEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEEEHHHHHHHHHH
T ss_pred             ccccCCCceEEECCCCCCCCCHHHHHHHHHHhhcchhcCCCCCCcHHHHHHHHHHhcccCCCcceEEecCcchhHHHHHh
Confidence            445668999999999999999999888865 4322  46788899999999999984   67899999999999998776


Q ss_pred             HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +    +||+|++++|+|..|...++..|++++.+|.++++..+     +.. ..+++++++||||||||.+++.+++.++
T Consensus        94 ~----~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~-----~~~-~~~~~~l~l~nP~NPtG~~~s~~~l~~~  163 (334)
T d2f8ja1          94 L----MFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIP-----EVN-VGEGDVVFIPNPNNPTGHVFEREEIERI  163 (334)
T ss_dssp             H----HSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSCCC-----CCC-CCTTEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             h----hccccccccccccccccchhccCCcccccccccccccc-----ccc-cccceEEEecccccccceeecHHHhhcc
Confidence            5    46999999999999999999999999999976654443     122 2678999999999999999999999999


Q ss_pred             HcCCCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCCCcHHHHHHHH
Q 014492          244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAAC  323 (423)
Q Consensus       244 ~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~~~~~~~a~~  323 (423)
                      ++.++++|+||+|.++..... .......+++++++|+||.++++|+|+||+++++++++++...+..++++.++|.++.
T Consensus       164 ~~~~~~ii~Dd~~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~i~~l~~~~~~~~~s~~~~~~a~  242 (334)
T d2f8ja1         164 LKTGAFVALDEAYYEFHGESY-VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAK  242 (334)
T ss_dssp             HTTTCEEEEECTTGGGTCCCC-GGGGGTCSSEEEEEESTTTSSCTTTCEEEEEECHHHHHHHHHHSCTTCSCHHHHHHHH
T ss_pred             ccceeEEeecccchhhccccc-ccccccCceEEEEecCccccchhhhhhhhcccchHHHHHHHHhhcccccchhhhhhcc
Confidence            988999999999988765433 2333467899999999999999999999999999999999999988999999999999


Q ss_pred             HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEE
Q 014492          324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVR  403 (423)
Q Consensus       324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iR  403 (423)
                      +++.+.+++++.++.++++|+++.+.|++++ +.+.|++|+|+|+.++. .+++++.+.|+++||.|+++     ++|||
T Consensus       243 ~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~g~f~~~~~~~-~~~~~~~~~L~~~GI~vr~~-----~~~vR  315 (334)
T d2f8ja1         243 VALDHREIFEERTKFIVEERERMKSALREMG-YRITDSRGNFVFVFMEK-EEKERLLEHLRTKNVAVRSF-----REGVR  315 (334)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEECCCCSSEEEEECCH-HHHHHHHHHHHHTTEECEEE-----TTEEE
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHCC-CeECCCCceEEEEECCC-CCHHHHHHHHHHCCCEECCC-----CCeEE
Confidence            9999999999999999999999999999987 56667788899999874 47889999999999999875     48999


Q ss_pred             EEecChhhHHHHHHHHhhh
Q 014492          404 VSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       404 is~~~~~~~~~l~~al~~l  422 (423)
                      ||+++.++++++.++|+.+
T Consensus       316 is~g~~ee~~~l~~~l~~f  334 (334)
T d2f8ja1         316 ITIGKREENDMILRELEVF  334 (334)
T ss_dssp             EECCCHHHHHHHHHHHHHC
T ss_pred             EEcCCHHHHHHHHHHHhcC
Confidence            9999998889999998863

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.9e-48  Score=374.69  Aligned_cols=346  Identities=22%  Similarity=0.323  Sum_probs=283.8

Q ss_pred             HhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC--CCCCCCCCc-chHHHHHHHHHHh----
Q 014492           70 HLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL--KFPYIYPDP-ESRRLRAALAKDS----  142 (423)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Y~~~-g~~~lr~~ia~~~----  142 (423)
                      ++..+..+. ...+...+++....++++|+|+.|++++++|+.+++++.+.  ....+|+++ |.++||+++++++    
T Consensus         4 r~~~~~~~~-~~~~~~~a~~~~~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~   82 (375)
T d1o4sa_           4 RISEIPISK-TMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERY   82 (375)
T ss_dssp             HHHHSCCCS-SHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hhhhCCCCH-HHHHHHHHHHHHHCCCCeEECCCcCCCCCCCHHHHHHHHHHHhcCCcCCCCCcCCHHHHHHHHhhhhhcc
Confidence            344444443 23355666777777888999999999999999999998873  223678654 8999999999986    


Q ss_pred             --CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCC
Q 014492          143 --GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREK  218 (423)
Q Consensus       143 --g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~  218 (423)
                        .+++++|++|+|+++++..++++++++||.|++++|+|+.|...+...|...+.++.+  +++.+|.+.++.... .+
T Consensus        83 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  161 (375)
T d1o4sa_          83 KKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-GK  161 (375)
T ss_dssp             TCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-TT
T ss_pred             ccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhc-cC
Confidence              3678999999999999999999999999999999999999999999999999888843  567888999988876 68


Q ss_pred             ceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCcc
Q 014492          219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLR  291 (423)
Q Consensus       219 ~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R  291 (423)
                      +++++++|||||||.+++.+++++|++.    +++||+||+|.++.+...   .....+..+++++++|+||.|+++|+|
T Consensus       162 ~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R  241 (375)
T d1o4sa_         162 TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWR  241 (375)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGC
T ss_pred             ccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCccc
Confidence            9999999999999999999999999875    999999999998876543   233345678999999999999999999


Q ss_pred             ccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEE
Q 014492          292 VGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCE  369 (423)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~  369 (423)
                      +||++++++.++.+......  ...+...+......++.  +....++.++++++.+.+.|++.++....|.+|+|+|++
T Consensus       242 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~~~~~~~l~~~g~~~~~p~gg~f~~~~  319 (375)
T d1o4sa_         242 VGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEV--DNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFK  319 (375)
T ss_dssp             CEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEE
T ss_pred             cccccccccchhhhhhhhccccccccccchhhhhhhccc--chhhhHHHHHHHHHHHHHHHHhcCceEecCCccEEEEEE
Confidence            99999999999888766554  34566666666655543  345667788899999999999887555568889999999


Q ss_pred             eCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          370 VTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       370 ~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      ++.  +..+++..|+ ++||.++||..+..++|+||+++.++  ++|.+++++|+
T Consensus       320 ~~~--~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~--e~l~~al~rl~  370 (375)
T d1o4sa_         320 VRG--DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSI--ERLTEALDRIE  370 (375)
T ss_dssp             CSS--CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHHH
T ss_pred             CCC--CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence            973  5677777765 78999999988878899999998653  67889888873

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=6.2e-48  Score=376.93  Aligned_cols=333  Identities=23%  Similarity=0.357  Sum_probs=274.7

Q ss_pred             HHHhCCCCCCeeEcCCCCC---CCCCCHHHHHHHhc-CCC-CCCCCC-cchHHHHHHHHHHh------CCCCCcEEEeCC
Q 014492           87 SIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKF-PYIYPD-PESRRLRAALAKDS------GLESDHILVGCG  154 (423)
Q Consensus        87 ~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~-~~~Y~~-~g~~~lr~~ia~~~------g~~~~~i~~t~G  154 (423)
                      ++++...+.++|+|+.|++   ++++|+.+++++.+ +.. .++|++ .|.++||+++++++      .+++++|++|+|
T Consensus        22 a~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~i~i~~G  101 (395)
T d1xi9a_          22 ARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAA  101 (395)
T ss_dssp             HHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESH
T ss_pred             HHHHHHCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcccccccccccccccc
Confidence            4555556778999999975   78999999999886 333 256855 47999999999986      357889999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      +++++.+++.+++++||.|++++|+|+.|...++..|++++.++.  +++|.+|++++++.+. ++++++++|+||||||
T Consensus       102 ~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~-~~~~~v~l~~P~NPTG  180 (395)
T d1xi9a_         102 VTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-DRTKAIAVINPNNPTG  180 (395)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred             cchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhhc-ccccEEEecCCCCCcc
Confidence            999999999999999999999999999999999999999999983  4578899999999996 7899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCcccccccc--CHHHHHH
Q 014492          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEY  304 (423)
Q Consensus       233 ~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~--~~~~~~~  304 (423)
                      .+++.+++++|++.    +++||+||+|.++.++..  ........+++|+++||||.|+++|+|+||+++  +...+..
T Consensus       181 ~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~  260 (395)
T d1xi9a_         181 ALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE  260 (395)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred             chhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEEEEeCcchhcccchhhcEeeEecCHHHHHHH
Confidence            99999999999886    999999999999876542  233345677899999999999999999999875  3222222


Q ss_pred             HHH----h-cCCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCC--CCC
Q 014492          305 LWR----A-KQPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTS--GMD  375 (423)
Q Consensus       305 l~~----~-~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~--~~~  375 (423)
                      +.+    . ...++.+.++|.++..++.+ .+|+++.++.++++++.+.+.|++++++.+ .|.+|+|+|++++.  ..+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~gg~~~~~~l~~~~~~~  340 (395)
T d1xi9a_         261 VREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKN  340 (395)
T ss_dssp             HHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSCSS
T ss_pred             HHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCceecCCCeeEEEeEECCCCCCCC
Confidence            222    1 12356778889888888865 679999999999999999999999886654 57789999999974  356


Q ss_pred             HHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          376 AKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       376 ~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ..+++..|+ ++||.+.||..+  ..++|+||+++...  +++.+++++|
T Consensus       341 ~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~--e~l~eal~rl  388 (395)
T d1xi9a_         341 DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPI--EILEEAMDRF  388 (395)
T ss_dssp             HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCH--HHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            778887766 789999998774  34789999998654  6788888876

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=1.1e-46  Score=370.78  Aligned_cols=324  Identities=20%  Similarity=0.293  Sum_probs=270.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC-C----CCCCCCC-cchHHHHHHHHHHh----C--CC-CCcEEEeCCHHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPD-PESRRLRAALAKDS----G--LE-SDHILVGCGADELIDLI  162 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y~~-~g~~~lr~~ia~~~----g--~~-~~~i~~t~G~~~al~~~  162 (423)
                      ++|+|+.|++++++|+.+++++.+. .    ..++|++ .|.++||++||+++    |  ++ .++|++|+|+++++.++
T Consensus        27 ~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~  106 (418)
T d2r5ea1          27 KPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYAT  106 (418)
T ss_dssp             CCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred             CCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhh
Confidence            4699999999999999999888762 2    1256854 58999999999986    4  45 47999999999999999


Q ss_pred             HHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      +++++++||.|+++.|+|+.|...++..|++++.++.+.          .+..+++++..... .+++++++|+||||||
T Consensus       107 ~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~p~NPtG  185 (418)
T d2r5ea1         107 IQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPLG  185 (418)
T ss_dssp             HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCC-TTEEEEEEESSCTTTC
T ss_pred             hhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhh-ccccceecCCcCcccc
Confidence            999999999999999999999999999999999998532          24578899988875 7899999999999999


Q ss_pred             cCCCHHHHHHHHcC----CCEEEEccCCccccCCCch----hhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH
Q 014492          233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY  304 (423)
Q Consensus       233 ~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~  304 (423)
                      .+++.+++++|++.    +++||+||+|.++.+++..    ....+..+++++++|+||.++++|+|+||+++++++++.
T Consensus       186 ~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~i~~  265 (418)
T d2r5ea1         186 KVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKN  265 (418)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEESCHHHHHH
T ss_pred             ccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccccCCCcccccccccchhhhh
Confidence            99999999999875    9999999999998865422    222334678999999999999999999999999999999


Q ss_pred             HHHhcCC--CCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--
Q 014492          305 LWRAKQP--YNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--  372 (423)
Q Consensus       305 l~~~~~~--~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--  372 (423)
                      +.+....  ++.+.+.|.++...+..        .+|+++++++++.+++.+.+.|+++++....|++|+|+|++++.  
T Consensus       266 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P~gg~f~~~~~~~~~  345 (418)
T d2r5ea1         266 LQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLD  345 (418)
T ss_dssp             HHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHTTCEEEECSBSSEEEEECGGGS
T ss_pred             hhhcccccccccccchhhhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhhcCCcccCCCceeEEEEEccccc
Confidence            9877653  67788888777765542        46889999999999999999999987555679999999999852  


Q ss_pred             ----------CCCHHHHHHHHH-hCCcEEEeCCCCC-------CCCeEEEEecChhhHHHHHHHHhhh
Q 014492          373 ----------GMDAKKLKDDLA-KMGVMIRHYNNKE-------LKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       373 ----------~~~~~~l~~~L~-~~gI~v~~~~~~~-------~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                                ..+..++++.|+ ++||.+.||..+.       +++|+|||++.++  ++|.+++++|
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~~~--e~l~~a~~rl  411 (418)
T d2r5ea1         346 SKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKD--ENLQKAAEIL  411 (418)
T ss_dssp             TTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             ccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEEecCCH--HHHHHHHHHH
Confidence                      346778888887 6799999986532       2579999997643  6788888876

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=3.9e-46  Score=364.11  Aligned_cols=337  Identities=15%  Similarity=0.237  Sum_probs=268.7

Q ss_pred             hHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCC
Q 014492           83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCG  154 (423)
Q Consensus        83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G  154 (423)
                      ++.+.......+.++|+|+.|+++|++|+.+++|+.+ +.. .++|++ +.++||+++++++    |  +++++|++|+|
T Consensus        19 ~~~~~~~~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~~~~Y~~-g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G   97 (394)
T d1c7na_          19 WDLMYSQNPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTG-PTEEYKKTVKKWMKDRHQWDIQTDWIINTAG   97 (394)
T ss_dssp             HHHHHHHCTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBC-CCHHHHHHHHHHHHHHHCCCCCGGGEEEESS
T ss_pred             HHHHHHHhHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCcCCCC-CCHHHHHHHHHHHHHhcCCCCCCcceEeecc
Confidence            4556666677778999999999999999999999886 322 367865 5679999999986    4  57899999999


Q ss_pred             HHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCc
Q 014492          155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPD  231 (423)
Q Consensus       155 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPt  231 (423)
                      +++++..+++++++|||.|+++.|.|..+....+..|++.+.++.   +..+.+|.+.++..+...+++++++|||||||
T Consensus        98 ~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPT  177 (394)
T d1c7na_          98 VVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPV  177 (394)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTT
T ss_pred             chhhhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEeccccccc
Confidence            999999999999999999999999999999999999999999984   34456899999988876789999999999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchh---hh--hccCCcEEEEccChhhhcccCccccccccCH-HH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM---EW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SI  301 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~---~~--~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~  301 (423)
                      |.+++.+++++|++.    +++||+||+|.++.+++...   ..  ....++++++.|+||.|+++|+|+||+++++ .+
T Consensus       178 G~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~~i  257 (394)
T d1c7na_         178 GRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDI  257 (394)
T ss_dssp             TBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH
T ss_pred             ceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccChhh
Confidence            999999999999875    99999999999988654221   11  1235789999999999999999999998865 45


Q ss_pred             HHHHHHhcCC---CCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHcc-CCCCe-ecCCCceEEEEEeCC-CC
Q 014492          302 IEYLWRAKQP---YNVSVAAEVAACAALQ-NPIYLEKVKEALIKERERLFKLLKD-VPFLN-PYPSYSNFILCEVTS-GM  374 (423)
Q Consensus       302 ~~~l~~~~~~---~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~-~~p~~~~~~~~~~~~-~~  374 (423)
                      .+.+.+....   ...+...+.++..... ..++.++.++.++++++.+.+.++. ...+. ..|++++|+|++++. +.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~~~~~~~~~~  337 (394)
T d1c7na_         258 RERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKM  337 (394)
T ss_dssp             HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCC
T ss_pred             hhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccccceeecCCCceeEEEEECCCCCC
Confidence            5555554432   2233334444433333 3578888999999999998888875 33344 357889999999985 67


Q ss_pred             CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          375 DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       375 ~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      ++.++++.|+ ++||.+.||+.+  ..++|+|||++.++  +.|.+++++|
T Consensus       338 ~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~--e~i~eal~rl  386 (394)
T d1c7na_         338 DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPS--SVIQESLERL  386 (394)
T ss_dssp             CHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeCCH--HHHHHHHHHH
Confidence            9999999987 669999998774  34789999998654  5566666665

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3e-46  Score=361.67  Aligned_cols=327  Identities=24%  Similarity=0.362  Sum_probs=276.6

Q ss_pred             HHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCCCCCCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           84 EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        84 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      ..++.+.|     +|+|+.|.+++++|+.+++|+.+ +...++|+++ |..+||++||+++++++++|++|+|+++++..
T Consensus        19 ~~la~~~~-----~I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~elr~aiA~~~~~~~~~Iiit~G~~~al~~   93 (368)
T d1v2da_          19 SGLAQRLG-----AVNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYV   93 (368)
T ss_dssp             HHHHHHHT-----CEECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHH
T ss_pred             HHHhccCC-----CEEecCCCCCCCCCHHHHHHHHHHhhcccCCCCCcCCHHHHHHHHhhcccCCcceeeccchHHHHHH
Confidence            33455554     59999999999999999999987 4555789665 79999999999999999999999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC---CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      ++.+++++||.|+++.|+|..+...++..|.+++.++.+   +++.+|++.+++.+. +++++++++|||||||.+++.+
T Consensus        94 ~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NPtG~~~~~~  172 (368)
T d1v2da_          94 LLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-PRTRALLLNTPMNPTGLVFGER  172 (368)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHH
T ss_pred             HhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhc-cCceEEEEcCCCCcccccCCHH
Confidence            999999999999999999999999999999999988853   567899999999997 6899999999999999999999


Q ss_pred             HHHHHHcC----CCEEEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--C
Q 014492          239 DLLKILEM----PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P  311 (423)
Q Consensus       239 ~l~~i~~~----~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~  311 (423)
                      ++++|++.    ++++|+||+|..+..... ........++.+++.|+||.++++|+|+||+++++++++.+.+...  .
T Consensus       173 ~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~~~~~~~~~~~  252 (368)
T d1v2da_         173 ELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTS  252 (368)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecccccccccccccccccccccccchhhhhhhccc
Confidence            98888764    999999999987665432 2233445678899999999999999999999999999988877654  4


Q ss_pred             CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCc
Q 014492          312 YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGV  388 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI  388 (423)
                      .+.+.+.|.++..++..   .+|+++.++.++++++++.+.|+++++....|.+++|+|++++ +.+..+   .|.++||
T Consensus       253 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~p~g~~~~~~~l~-~~~~~~---ll~~~gI  328 (368)
T d1v2da_         253 FSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELP-GWDAFR---LVEEARV  328 (368)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECT-TCCHHH---HHHHTCE
T ss_pred             cccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhcCcEEecCCceeEEEEeCC-ccHHHH---HHHhCCE
Confidence            67788888888877764   4578999999999999999999999765567888999999998 555544   4668999


Q ss_pred             EEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          389 MIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       389 ~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++|++.+    ..++++|||++..+  +++.+++++|
T Consensus       329 ~v~pg~~F~~~~~~~~~iRis~~~~~--e~i~~ai~rL  364 (368)
T d1v2da_         329 ALIPASAFYLEDPPKDLFRFAFCKTE--EELHLALERL  364 (368)
T ss_dssp             ECEEGGGGCSSSCCTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             EEEechhhCCCCCCCCEEEEEecCCH--HHHHHHHHHH
Confidence            99987652    35789999998643  6788888876

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.7e-46  Score=363.75  Aligned_cols=349  Identities=19%  Similarity=0.245  Sum_probs=279.6

Q ss_pred             HHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-chHHHHHHHHHHh----
Q 014492           69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDS----  142 (423)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-g~~~lr~~ia~~~----  142 (423)
                      .++...+++ ++..+..++......+.++|+|+.|++++++|+.+.+++.+. ....+||++ |..+||+++++++    
T Consensus         3 ~r~~~~~~~-~i~~l~~~a~~~~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~   81 (389)
T d2gb3a1           3 DRVLLTEES-PIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERIYENKPEVVYYSHSAGIWELREAFASYYKRRQ   81 (389)
T ss_dssp             HHHHSCCCC-TTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCSSCCCCCTTCCHHHHHHHHHHHHHTS
T ss_pred             hhhhcCCCC-HHHHHHHHHHHHHHcCCCEEECCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCcCCHHHHHHHHHHHHHhc
Confidence            445555655 455554455555556778999999999999999999999874 344779665 7999999999986    


Q ss_pred             C--CCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCc
Q 014492          143 G--LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKP  219 (423)
Q Consensus       143 g--~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~  219 (423)
                      |  +++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|+.++.++.+. ++..+.+.+...+. +++
T Consensus        82 g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  160 (389)
T d2gb3a1          82 RVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFIN-ERT  160 (389)
T ss_dssp             CCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCC-TTE
T ss_pred             CCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCccccccccccccccchhhhhhhhcc-cCc
Confidence            3  5789999999999999999999999999999999999999999999999999998643 33444455555554 789


Q ss_pred             eEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhhh-hccCCcEEEEccChhhhcccCccccc
Q 014492          220 KCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEW-VKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      ++++++|||||||.+++.+++++|++.    +++||+||+|.++.+++..... ....++++++.|+||.++++|+|+||
T Consensus       161 ~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~  240 (389)
T d2gb3a1         161 KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGC  240 (389)
T ss_dssp             EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEE
T ss_pred             cEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCcccceee
Confidence            999999999999999999999998875    9999999999998876543222 23468899999999999999999999


Q ss_pred             cccCHHH-HHHHHHhc-CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEEe
Q 014492          295 GAFPLSI-IEYLWRAK-QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCEV  370 (423)
Q Consensus       295 i~~~~~~-~~~l~~~~-~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~~  370 (423)
                      ++++++. .+...... ..++.+.+.+.++..++.. +++++++++.++++++.+.+.|+++++.. ..|++|+|+|+++
T Consensus       241 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~g~~~~~~l  320 (389)
T d2gb3a1         241 LITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAEL  320 (389)
T ss_dssp             EECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEEC
T ss_pred             eeccchhHHHHHhhhhhccccccccccccccccccccchhcccccccccccchhhhhhhhhhccccccCCCceEEEEEeC
Confidence            9996654 44443333 3456778888888888875 57899999999999999999999998764 5688999999999


Q ss_pred             CCCCCHHHHHHHHHh------CCcEEEeCCCC-----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          371 TSGMDAKKLKDDLAK------MGVMIRHYNNK-----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       371 ~~~~~~~~l~~~L~~------~gI~v~~~~~~-----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      | ..++.++++.|++      +||.+.|++.+     .+++++||+++..+  +.|.+++++|
T Consensus       321 p-~~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~--~~l~~a~~~L  380 (389)
T d2gb3a1         321 P-VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEK--DLLSRAIDVL  380 (389)
T ss_dssp             S-SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCH--HHHHHHHHHH
T ss_pred             C-CCCHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEcCCH--HHHHHHHHHH
Confidence            8 4588899988864      36788887642     23679999998654  5677777665

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=5.5e-46  Score=365.23  Aligned_cols=328  Identities=17%  Similarity=0.217  Sum_probs=263.6

Q ss_pred             CCCCeeEcCCCCCCCCC----CHHHHHHHhcC---CCCCCCCC-cchHHHHHHHHHHh------------CCCCCcEEEe
Q 014492           93 KPEDIVKIDANENPYGP----PPEVREALGQL---KFPYIYPD-PESRRLRAALAKDS------------GLESDHILVG  152 (423)
Q Consensus        93 ~~~~~i~l~~~~~~~~~----~~~v~~al~~~---~~~~~Y~~-~g~~~lr~~ia~~~------------g~~~~~i~~t  152 (423)
                      .+.++|+|+.|++++++    ++.+.+++.+.   ...++|++ .|.++||+++|+++            ++++++|++|
T Consensus        28 ~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~it  107 (412)
T d1bw0a_          28 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLC  107 (412)
T ss_dssp             SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEE
T ss_pred             CCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEEEe
Confidence            34679999999987654    46677777652   23367954 58999999999986            2678899999


Q ss_pred             CCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhcCCceEEEEcCCCCC
Q 014492          153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP  230 (423)
Q Consensus       153 ~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~i~l~~p~NP  230 (423)
                      +|+++++..++++++++||+|++++|+|+.|...++..|++++.+|++  +++..|++++++.+. .++++++++|||||
T Consensus       108 ~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~~~l~np~NP  186 (412)
T d1bw0a_         108 SGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-DKTKLLIVTNPSNP  186 (412)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-TTEEEEEEESSCTT
T ss_pred             cccccchhhhhhhhhccccceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhhhh-cccccccccccccc
Confidence            999999999999999999999999999999999999999999999953  567899999999886 78999999999999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchh-------hhhccCCcEEEEccChhhhcccCccccccccCH
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-------EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL  299 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~-------~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~  299 (423)
                      ||.+++.+++++|++.    +++||+||+|.++.+++...       .......++++++|+||.|+++|+|+||+++++
T Consensus       187 tG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~  266 (412)
T d1bw0a_         187 CGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVD  266 (412)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEEC
T ss_pred             ccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccc
Confidence            9999999999999985    99999999999988754321       112334678999999999999999999998753


Q ss_pred             ------HHHHHHHHhcCC-CCCcHHHHHHHH-HHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceEEEEE
Q 014492          300 ------SIIEYLWRAKQP-YNVSVAAEVAAC-AALQN-PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNFILCE  369 (423)
Q Consensus       300 ------~~~~~l~~~~~~-~~~~~~~~~a~~-~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~~~~~  369 (423)
                            ..+....+.... .+.+...|.++. .+... .+|+.+.+++++++++.+.+.|.+..++. ..|.+|+|+|++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~p~gg~~l~~~  346 (412)
T d1bw0a_         267 PHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR  346 (412)
T ss_dssp             TTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEE
T ss_pred             hhhcchhhhhhhccccccccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhcCceecCCCCceEEEEe
Confidence                  344433333222 334444444443 34343 57899999999999999999998865555 468889999998


Q ss_pred             eC-----CCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          370 VT-----SGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       370 ~~-----~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      ++     +..+..+++++|+ ++||.+.||+.++.++|+||+++.++  ++|.+|+++|+
T Consensus       347 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~--e~l~eal~Rl~  404 (412)
T d1bw0a_         347 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPV--EVYREAVERIK  404 (412)
T ss_dssp             ECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCH--HHHHHHHHHHH
T ss_pred             CChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcCCH--HHHHHHHHHHH
Confidence            86     2357889999887 67999999988888999999998754  67888888873

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-45  Score=358.57  Aligned_cols=326  Identities=20%  Similarity=0.340  Sum_probs=276.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhc-C-CCCCCC-CCcchHHHHHHHHHHh----CC--CCC-cEEEeCCHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIY-PDPESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR  164 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~Y-~~~g~~~lr~~ia~~~----g~--~~~-~i~~t~G~~~al~~~~~  164 (423)
                      .++|+|+.|.+++++|+.+++++.+ + ...++| +..|..+||+++|+++    |+  +++ +|++|+|+++++.++++
T Consensus        26 ~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~  105 (382)
T d1u08a_          26 HQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAIT  105 (382)
T ss_dssp             TTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHH
T ss_pred             CCCEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHHHHHHHh
Confidence            3679999999999999999998876 2 223678 5558999999999986    54  455 69999999999999999


Q ss_pred             HhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC-CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHH
Q 014492          165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +++++||.|++++|+|..+.......|+.++.++. ++++.+|++++++.+. .++++++++|||||||.+++.+++++|
T Consensus       106 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~P~NPtG~v~~~~~~~~l  184 (382)
T d1u08a_         106 ALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAAL  184 (382)
T ss_dssp             HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             hcccccceEEEecccccchhhhhhhccccceecccccccccCCHHHHhhhhc-cCccEEEECCCCcccccccccccchhh
Confidence            99999999999999999999999999998888885 3567889999999887 689999999999999999999999988


Q ss_pred             HcC----CCEEEEccCCccccCCCc----hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC--CCC
Q 014492          244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN  313 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--~~~  313 (423)
                      ++.    +++++.|+.|..+.+.+.    ........++++++.|+||.++++|+|+||+++++++++.+.+...  .++
T Consensus       185 ~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~~~~~~~~~~~~~~~~  264 (382)
T d1u08a_         185 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFS  264 (382)
T ss_dssp             HHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTSS
T ss_pred             hhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccchhHHHHHhhhcccccc
Confidence            774    899999999988775432    1122234678999999999999999999999999999998877654  478


Q ss_pred             CcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCC--CCCHHHHHHHHH-hCCcE
Q 014492          314 VSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTS--GMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       314 ~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~--~~~~~~l~~~L~-~~gI~  389 (423)
                      .+.+.|.++..++++ .+|+..+++.++++++.+.+.++..++....|.+|+|+|++++.  ..+..+++++|+ ++||.
T Consensus       265 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~p~gg~~~~~~~~~~~~~d~~e~~~~ll~e~gV~  344 (382)
T d1u08a_         265 VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVA  344 (382)
T ss_dssp             CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEE
T ss_pred             cccccccccccccccchHHHHHHHHHHHhhhhhhhhhhccCCcEEecCCceEEEEEecCCCCCCCHHHHHHHHHHHCCEE
Confidence            899999999988874 67899999999999999999998776544568899999999984  578899999876 78999


Q ss_pred             EEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhhC
Q 014492          390 IRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHLY  423 (423)
Q Consensus       390 v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l~  423 (423)
                      +.||..+    ...+++|||++..+  ++|.+++++|+
T Consensus       345 v~PG~~F~~~~~~~~~~Ris~~~~~--e~l~~al~RL~  380 (382)
T d1u08a_         345 AIPLSVFCADPFPHKLIRLCFAKKE--STLLAAAERLR  380 (382)
T ss_dssp             CEEGGGGCSSCCCSCEEEEECCSCH--HHHHHHHHHHT
T ss_pred             EEcchhhCCCCCCCCEEEEEEeCCH--HHHHHHHHHHh
Confidence            9998653    34579999998753  78999999985

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-45  Score=360.69  Aligned_cols=326  Identities=20%  Similarity=0.295  Sum_probs=270.0

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhc-CCC---CCCCCC-cchHHHHHHHHHHh----CCC--C-CcEEEeCCHHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPD-PESRRLRAALAKDS----GLE--S-DHILVGCGADELIDL  161 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~Y~~-~g~~~lr~~ia~~~----g~~--~-~~i~~t~G~~~al~~  161 (423)
                      ..|+|+|+.|++++++|+.+.+++.+ +..   .++|++ .|.++||+++++++    |++  + ++|++|+|+++++.+
T Consensus        24 ~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~it~G~~~al~~  103 (418)
T d1w7la_          24 EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFT  103 (418)
T ss_dssp             TSCCEECCCCSCSSCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHH
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceeeccCcHHHHHH
Confidence            35789999999999999999999877 322   256855 58999999999986    554  3 589999999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC------------CCCCCCHHHHHHHhhcCCceEEEEcCCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK------------SDFSLNVELIADAVEREKPKCIFLTSPNN  229 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~------------~~~~~d~~~l~~~i~~~~~~~i~l~~p~N  229 (423)
                      ++++++++||.|+++.|+|+.|...+...|++++.++..            .++.+|.+++..... .+++++++++|||
T Consensus       104 ~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~i~~~~p~N  182 (418)
T d1w7la_         104 AFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-SRTKALVLNTPNN  182 (418)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCC-TTEEEEEEESSCT
T ss_pred             HHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhcccc-ccccceeccCcCC
Confidence            999999999999999999999999999999999988832            245678888888776 6889999999999


Q ss_pred             CcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhh-ccCCcEEEEccChhhhcccCccccccccCHHH
Q 014492          230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI  301 (423)
Q Consensus       230 PtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~-~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~  301 (423)
                      |||.+++.+++++|++.    +++||+||+|.++.+++.   ....+ +..++++++.|+||.++++|+|+||+++++++
T Consensus       183 PtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~~~~  262 (418)
T d1w7la_         183 PLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI  262 (418)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEECCHHH
T ss_pred             cccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcccccccchhh
Confidence            99999999999999885    999999999999886542   12222 33578999999999999999999999999999


Q ss_pred             HHHHHHhcC--CCCCcHHHHHHHHHHhCC--------hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC
Q 014492          302 IEYLWRAKQ--PYNVSVAAEVAACAALQN--------PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT  371 (423)
Q Consensus       302 ~~~l~~~~~--~~~~~~~~~~a~~~~l~~--------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~  371 (423)
                      ++.+.+...  .++.+.+.|.++..++.+        .+++...++.++++++.+.+.|++++.....|.+|+|+|++++
T Consensus       263 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~P~gg~f~~~~~~  342 (418)
T d1w7la_         263 MKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPLIPQGSYFLITDIS  342 (418)
T ss_dssp             HHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSBSSEEEEECH
T ss_pred             hhhhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhhcCCcccCCCceeEEEEECc
Confidence            999887764  467888888888877764        2567888999999999999999998755567899999999885


Q ss_pred             C-------------CCCHHHHHHHHH-hCCcEEEeCCCC-------CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          372 S-------------GMDAKKLKDDLA-KMGVMIRHYNNK-------ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       372 ~-------------~~~~~~l~~~L~-~~gI~v~~~~~~-------~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +             ..+..+++++|+ ++||.+.||+.+       ..++|||||++..+  +++.+++++|
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~~~--~~l~~a~~rl  412 (418)
T d1w7la_         343 DFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDE--ATLQAMDEKL  412 (418)
T ss_dssp             HHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCH--HHHHHHHHHH
T ss_pred             ccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEEEcCCH--HHHHHHHHHH
Confidence            2             123677888876 789999998653       35689999997643  5677777665

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-44  Score=346.77  Aligned_cols=324  Identities=20%  Similarity=0.247  Sum_probs=255.1

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhc-CCC-CCCCCCcchHHHHHHHHHHh----C--CCCCcEEEeCCHHHHHHHHHHHhcC
Q 014492           97 IVKIDANENPYGPPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVLD  168 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-~~~Y~~~g~~~lr~~ia~~~----g--~~~~~i~~t~G~~~al~~~~~~l~~  168 (423)
                      +|+|+.++++|++||.+.+++.+ +.. .++|++.+..++|+++++++    |  +++++|++|+|+++++..++.++++
T Consensus         1 ~~~~~~~~~df~~p~~i~eal~~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~~   80 (361)
T d1d2fa_           1 LLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE   80 (361)
T ss_dssp             CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC
T ss_pred             CcCcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhhhccc
Confidence            58999999999999999999987 333 25786654467999999876    4  5788999999999999999999999


Q ss_pred             CCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc
Q 014492          169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE  245 (423)
Q Consensus       169 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~  245 (423)
                      |||+|++++|+|+.|...++..|.+++.++.   ++++.+|++.+++.+.+.++++++++|||||||.+++.+++++|++
T Consensus        81 ~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~i~~  160 (361)
T d1d2fa_          81 TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMAD  160 (361)
T ss_dssp             TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHH
T ss_pred             cccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhhhhhhhh
Confidence            9999999999999999999999999999884   3455689999999998789999999999999999999998888876


Q ss_pred             C----CCEEEEccCCccccCCCchhh--hhccCCcEEEEccChhhhcccCccccccccCH-HHHHH-HHHhcCC---CCC
Q 014492          246 M----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEY-LWRAKQP---YNV  314 (423)
Q Consensus       246 ~----~~~li~Deay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~-l~~~~~~---~~~  314 (423)
                      .    ++++|+||+|.++.+++....  .....++++++.|+||.++++|+|+||++.+. ...+. +......   .++
T Consensus       161 ~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (361)
T d1d2fa_         161 LCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSP  240 (361)
T ss_dssp             HHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSC
T ss_pred             hhhhhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecchhHHHHHHhhhcccccccccc
Confidence            4    999999999999876542221  12246789999999999999999999987653 33333 2232222   345


Q ss_pred             cHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHcc-CCCCe-ecCCCceEEEEEeC-CCCCHHHHHHHHH-hCCcE
Q 014492          315 SVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKD-VPFLN-PYPSYSNFILCEVT-SGMDAKKLKDDLA-KMGVM  389 (423)
Q Consensus       315 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~-~~p~~~~~~~~~~~-~~~~~~~l~~~L~-~~gI~  389 (423)
                      +...+.++..++.. .++.++.+..++++++.+.+.+.+ ...+. ..|.+++|+|++++ .+.++.+++++|+ ++||.
T Consensus       241 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~Ll~~~gv~  320 (361)
T d1d2fa_         241 SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVA  320 (361)
T ss_dssp             CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEE
T ss_pred             hhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhcccccccccCceeEEEEEccCCCCCHHHHHHHHHHhCCEE
Confidence            55566655555543 567888888888888888877654 33333 35778899999985 4679999999987 56999


Q ss_pred             EEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          390 IRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +.||..+  .++++||||++.++  +++.+++++|
T Consensus       321 v~pG~~F~~~~~~~vRis~~~~~--e~l~~al~rl  353 (361)
T d1d2fa_         321 IMPGYTYGEEGRGFVRLNAGCPR--SKLEKGVAGL  353 (361)
T ss_dssp             CEEGGGGCGGGTTEEEEECCSCH--HHHHHHHHHH
T ss_pred             EEeccccCCCCCCEEEEEEcCCH--HHHHHHHHHH
Confidence            9998763  34679999998644  4566665554

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=2.2e-43  Score=348.08  Aligned_cols=327  Identities=19%  Similarity=0.257  Sum_probs=259.2

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcCC-------------CCCCCCCc-chHHHHHHHHHHh--------CCCCCcEEE
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQLK-------------FPYIYPDP-ESRRLRAALAKDS--------GLESDHILV  151 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~-------------~~~~Y~~~-g~~~lr~~ia~~~--------g~~~~~i~~  151 (423)
                      +..+|+|+.+||.+. .+.+.+.+.+..             ....|+++ |.++||++||+++        .+++++|++
T Consensus        35 p~G~i~l~~aen~l~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~~e~Ivi  113 (428)
T d1iaya_          35 PNGVIQMGLAENQLC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVM  113 (428)
T ss_dssp             TTSBEECSSCCCCSS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEE
T ss_pred             CCceEEeecccCccc-hHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCCCCCCChhhEEE
Confidence            456899999999773 355555554310             11358665 8999999999986        256889999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH-CCCeEEEecCC--CCCCCCHHHHHHHhh-----cCCceEEE
Q 014492          152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCIF  223 (423)
Q Consensus       152 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~--~~~~~d~~~l~~~i~-----~~~~~~i~  223 (423)
                      |+|+++++..++.++++|||.|++++|+|..|...+.. .|++++.++.+  +++.+|+++++..+.     ..++++++
T Consensus       114 t~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  193 (428)
T d1iaya_         114 AGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI  193 (428)
T ss_dssp             EEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhhhccCCCceEEE
Confidence            99999999999999999999999999999999887764 58999999854  568899998876542     25788999


Q ss_pred             EcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch----hhh-------hccCCcEEEEccChhhhccc
Q 014492          224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEW-------VKKHDNLIVLRTFSKRAGLA  288 (423)
Q Consensus       224 l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~-------~~~~~~~i~i~S~SK~~g~~  288 (423)
                      ++|||||||.+++.+++++|++.    +++||+||+|.++.+++..    ...       ....+++++++||||.|+++
T Consensus       194 l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~  273 (428)
T d1iaya_         194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLP  273 (428)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCG
T ss_pred             EccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCC
Confidence            99999999999999988888764    9999999999998865421    111       12357899999999999999


Q ss_pred             Ccccccccc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492          289 GLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNP----IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS  363 (423)
Q Consensus       289 G~R~G~i~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  363 (423)
                      |+|+||+++ ++.+.+.+.........+...+.++.+.+.+.    +++++.++.++++++.+.+.|+..++....|.+|
T Consensus       274 GlRiG~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~~gi~~~~p~gg  353 (428)
T d1iaya_         274 GFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAG  353 (428)
T ss_dssp             GGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSS
T ss_pred             CcccccccccccchhhhhhhhhcccccccccccchhhhhhhhccccccccccccccchhHHHHHHHHHhCCCEEecCCcc
Confidence            999999998 55677777776666677888888888888774    4567788889999999999998876544567889


Q ss_pred             eEEEEEeCCCC------CHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          364 NFILCEVTSGM------DAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       364 ~~~~~~~~~~~------~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|+|++++...      +..++++.|. ++||.+.||..+  ..++|+||+++..++ +.|.+++++|
T Consensus       354 ~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~-~~l~~al~Rl  420 (428)
T d1iaya_         354 LFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDD-GTVDIALARI  420 (428)
T ss_dssp             SEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCH-HHHHHHHHHH
T ss_pred             eEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCH-HHHHHHHHHH
Confidence            99999997421      3456788887 679999998763  457899999986543 6788888887

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=1.3e-43  Score=350.19  Aligned_cols=326  Identities=18%  Similarity=0.243  Sum_probs=257.7

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC--------C------CCCCCCCc-chHHHHHHHHHHh--------CCCCCcEEE
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL--------K------FPYIYPDP-ESRRLRAALAKDS--------GLESDHILV  151 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~--------~------~~~~Y~~~-g~~~lr~~ia~~~--------g~~~~~i~~  151 (423)
                      ..+|+|+.+||.+. .+.+.+.+.+-        .      ....|+++ |.++||+++|+++        .+++++|++
T Consensus        36 ~G~i~l~~~en~l~-~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~pe~I~i  114 (431)
T d1m7ya_          36 NGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVL  114 (431)
T ss_dssp             TSBEECSSCCCCSC-HHHHHHHHHHCCTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEE
T ss_pred             CcEEEeeccccccc-HHHHHHHHHhCCchhhhhhhhhhccHHhcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCcceEEE
Confidence            45899999999874 35555544321        0      01358766 8999999999986        257899999


Q ss_pred             eCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH-CCCeEEEecCC--CCCCCCHHHHHHHhhc-----CCceEEE
Q 014492          152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIF  223 (423)
Q Consensus       152 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~~~--~~~~~d~~~l~~~i~~-----~~~~~i~  223 (423)
                      |+|+++++..++.++++|||+|+++.|+|+.+...++. .|++++.++.+  ++|.+|++.+++.+.+     .++++++
T Consensus       115 t~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~  194 (431)
T d1m7ya_         115 TAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL  194 (431)
T ss_dssp             EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcceEEE
Confidence            99999999999999999999999999999988887764 68999999854  4678999999887743     4688999


Q ss_pred             EcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch----hhhh---------ccCCcEEEEccChhhhc
Q 014492          224 LTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWV---------KKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       224 l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~----~~~~---------~~~~~~i~i~S~SK~~g  286 (423)
                      ++|||||||.+++.+++++|++.    +++||+||+|.++.+++..    ....         ...+++++++|+||.||
T Consensus       195 ~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~  274 (431)
T d1m7ya_         195 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG  274 (431)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSC
T ss_pred             ecCccccccccccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCccccc
Confidence            99999999999999999999885    9999999999998865421    1111         12468999999999999


Q ss_pred             ccCccccccccCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhCCh----HHHHHHHHHHHHHHHHHHHHHccCCCCeecCC
Q 014492          287 LAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQNP----IYLEKVKEALIKERERLFKLLKDVPFLNPYPS  361 (423)
Q Consensus       287 ~~G~R~G~i~~~~~~~~~l~~-~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~  361 (423)
                      ++|+|+||++++++.+..... .......+...+.++.+.+.+.    +|+++.+++++++++.+.+.|++.+.....|.
T Consensus       275 ~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~~~p~  354 (431)
T d1m7ya_         275 LPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGN  354 (431)
T ss_dssp             CGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCC
T ss_pred             CCCCccceeccchhhhHHHHHHHhccccccccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcCCcEEecCC
Confidence            999999999998877655444 4444567777777777777663    57888899999999999999988764445677


Q ss_pred             CceEEEEEeCCC------CCHHHHHHHHH-hCCcEEEeCCCC--CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSG------MDAKKLKDDLA-KMGVMIRHYNNK--ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~------~~~~~l~~~L~-~~gI~v~~~~~~--~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      +|+|+|++++..      .+..+++++|. ++||.+.||..+  ..++|+||+++..++ ++|.+++++|
T Consensus       355 gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a~~~e-~~l~~al~rL  423 (431)
T d1m7ya_         355 AGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPE-RTLDLAMQRL  423 (431)
T ss_dssp             SSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCH-HHHHHHHHHH
T ss_pred             ceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeCcCCH-HHHHHHHHHH
Confidence            899999999742      23457888876 789999998763  447899999986543 6788888876

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=6.6e-43  Score=342.18  Aligned_cols=352  Identities=20%  Similarity=0.271  Sum_probs=267.8

Q ss_pred             CCchhHHHHhcccCCCCCCCchHHHHHHhCCCCCCeeEcCCCCCCCC--CCHHHHHHHhcC----C-CCCCCCCc-chHH
Q 014492           62 TGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYG--PPPEVREALGQL----K-FPYIYPDP-ESRR  133 (423)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~--~~~~v~~al~~~----~-~~~~Y~~~-g~~~  133 (423)
                      +.++++++....++++.    +.++......  +++|+|+.|.++..  |.+.+.+++.++    . ....|++. |.++
T Consensus         2 ~~~~~~~~~~~~~~~s~----ire~~~~~~~--~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~   75 (403)
T d1wsta1           2 NFDSFFSEKAMLMKASE----VRELLKLVET--SDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTP   75 (403)
T ss_dssp             CGGGGCCHHHHHCCCHH----HHHHHHHHTS--SSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHH
T ss_pred             CHHHHHHHHHhcCCCcH----HHHHHHHhCC--CCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHH
Confidence            34555666666665442    3333332233  56899999876543  334565666552    1 12468654 8999


Q ss_pred             HHHHHHHHh------CCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCH
Q 014492          134 LRAALAKDS------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV  207 (423)
Q Consensus       134 lr~~ia~~~------g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~  207 (423)
                      ||+++|+++      .+++++|++|+|+++++..++.+++++||.|+++.|+|..|...++..|++++.++.++. ..+.
T Consensus        76 lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~  154 (403)
T d1wsta1          76 LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDK-GMRV  154 (403)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT-EECH
T ss_pred             HHHHHHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeeccc-CCcc
Confidence            999999996      368899999999999999999999999999999999999999999999999999996543 2233


Q ss_pred             HHHHH----Hhh--cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCc
Q 014492          208 ELIAD----AVE--REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDN  274 (423)
Q Consensus       208 ~~l~~----~i~--~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~  274 (423)
                      ..+..    ...  +..+.++++++||||||.+++.+++++|++.    +++||+||+|.++.+++.   .....+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~  234 (403)
T d1wsta1         155 DLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGR  234 (403)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSC
T ss_pred             ccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCc
Confidence            22221    221  1345567778999999999999999998774    999999999999886543   2334456789


Q ss_pred             EEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHH
Q 014492          275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKL  349 (423)
Q Consensus       275 ~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~  349 (423)
                      +++++|+||.++ +|+|+||+++++++++.+......  ...+...|.+...++..   ..++++.++.++++++.+.+.
T Consensus       235 ~i~~~S~SK~~~-~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (403)
T d1wsta1         235 VIYLGTFSKILA-PGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEA  313 (403)
T ss_dssp             EEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEccccceec-CcccccccccchHHHHHHHHHHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHH
Confidence            999999999986 999999999999999888765543  56677777776666655   356788899999999999999


Q ss_pred             HccC--CCCe-ecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          350 LKDV--PFLN-PYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       350 L~~~--~~~~-~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      |.+.  .++. ..|.+|+|+|+++|++.+++.+++.|.++||.+.|++.+    ..++++||+++..++ +++.+++++|
T Consensus       314 L~~~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~~~~-~~l~~al~rl  392 (403)
T d1wsta1         314 LEEYMPEGVEWTKPEGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPE-ETIREGVRRL  392 (403)
T ss_dssp             HHHHCCTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSSCH-HHHHHHHHHH
T ss_pred             HHhhccCCeEEeCCCceeEEEEECCCCCCHHHHHHHHHHCCEEEEechhhcCCCCCCCEEEEEecCCCH-HHHHHHHHHH
Confidence            9764  2333 468899999999999889999999999999999997652    346899999985432 6677777665

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.1e-43  Score=345.51  Aligned_cols=326  Identities=20%  Similarity=0.250  Sum_probs=259.0

Q ss_pred             CCCeeEcCCCCCCCC--CCHHHHHHHhcC-----CCCCCCCC-cchHHHHHHHHHHh----C---CCCCcEEEeCCHHHH
Q 014492           94 PEDIVKIDANENPYG--PPPEVREALGQL-----KFPYIYPD-PESRRLRAALAKDS----G---LESDHILVGCGADEL  158 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~--~~~~v~~al~~~-----~~~~~Y~~-~g~~~lr~~ia~~~----g---~~~~~i~~t~G~~~a  158 (423)
                      ++++|+|+.|.++..  |.+.+.+++.++     .....|++ .|.++||++||+++    |   +++++|++|+|++++
T Consensus        37 ~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~a  116 (420)
T d1vp4a_          37 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQA  116 (420)
T ss_dssp             STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHH
T ss_pred             CCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCCHHHeEeccchhhh
Confidence            467999999987653  334555555442     11256855 48999999999986    3   578999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-------CCce-EEEEcCCCCC
Q 014492          159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPK-CIFLTSPNNP  230 (423)
Q Consensus       159 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------~~~~-~i~l~~p~NP  230 (423)
                      +.+++.++++|||.|++++|+|..|...++..|++++.+|.++. ++|++.++..+.+       .+++ ++++++||||
T Consensus       117 l~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NP  195 (420)
T d1vp4a_         117 LDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP  195 (420)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTT
T ss_pred             HHHHHHhhhccccccccccccccchhHHHHHHhhhccccccccc-ccccchhhhhhhhhHHHhhccccceeeEecCCCCc
Confidence            99999999999999999999999999999999999999997543 6888877654421       2333 5556799999


Q ss_pred             cCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCc---hhhhhccCCcEEEEccChhhhcccCccccccccCHHHHH
Q 014492          231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE  303 (423)
Q Consensus       231 tG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~  303 (423)
                      ||.+++.+++++|++.    ++++|+||+|.++.+++.   ........+++++++|+||.+ ++|+|+||+++++++++
T Consensus       196 tG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~-~~G~RiG~~~~~~~~i~  274 (420)
T d1vp4a_         196 AGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVL-APGLRIGMVAGSKEFIR  274 (420)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTT-CGGGCEEEEECCHHHHH
T ss_pred             cchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEecccccc-ccccccccccccchhhh
Confidence            9999999999998875    999999999999887543   233344678899999999976 59999999999999999


Q ss_pred             HHHHhcCC--CCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHcc----CCCCee-cCCCceEEEEEeCCC
Q 014492          304 YLWRAKQP--YNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKD----VPFLNP-YPSYSNFILCEVTSG  373 (423)
Q Consensus       304 ~l~~~~~~--~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~p~~~~~~~~~~~~~  373 (423)
                      ++.+....  .+.+...|.++..++.+   .+++++.++.++++++.+.+.|++    ++++.+ .|.+|+|+|++++++
T Consensus       275 ~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~~~~~  354 (420)
T d1vp4a_         275 KIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEG  354 (420)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTT
T ss_pred             hhhhhhhhccccCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEECCCC
Confidence            99877655  46678888888777765   345667778888888888777764    445554 577889999999988


Q ss_pred             CCHHHHHHHHHhCCcEEEeCCCC----CCCCeEEEEecChhhHHHHHHHHhhh
Q 014492          374 MDAKKLKDDLAKMGVMIRHYNNK----ELKGYVRVSVGKPEHTDALMECLMHL  422 (423)
Q Consensus       374 ~~~~~l~~~L~~~gI~v~~~~~~----~~~~~iRis~~~~~~~~~l~~al~~l  422 (423)
                      .++.++++.|.++||.+.||+.+    ...+++|||++..++ ++|.+++++|
T Consensus       355 ~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~~~~~-e~l~~a~~rL  406 (420)
T d1vp4a_         355 FDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLPPD-EKIVEGIKRL  406 (420)
T ss_dssp             CCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSSCH-HHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeCcCCH-HHHHHHHHHH
Confidence            89999999999999999998653    235799999986443 6788887776

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=6.7e-40  Score=320.43  Aligned_cols=331  Identities=16%  Similarity=0.163  Sum_probs=255.0

Q ss_pred             CCCchHHHHHHhCCC-CCCeeEcCCCC---CCC--CCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh-C----
Q 014492           79 PILPFEVLSIQLGRK-PEDIVKIDANE---NPY--GPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G----  143 (423)
Q Consensus        79 ~~~~~~~~~~~~~~~-~~~~i~l~~~~---~~~--~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~-g----  143 (423)
                      |.+++..+...+..+ .++.|+|+.|.   ++.  +..+.|++++..+   ...+.| |..|.++||+++++++ +    
T Consensus        11 p~d~i~~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~   90 (401)
T d7aata_          11 PPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSE   90 (401)
T ss_dssp             CCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred             CCChHHHHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCc
Confidence            455555565554332 24579999983   222  3457888887653   233578 5569999999999986 1    


Q ss_pred             -CCCCcEEEeCCH-----HHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhh
Q 014492          144 -LESDHILVGCGA-----DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVE  215 (423)
Q Consensus       144 -~~~~~i~~t~G~-----~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~  215 (423)
                       +++++|+.+.|+     .+++..+++++++|||+|++++|+|+.|...++.+|++++.+|.  ++++..|++.+++.+.
T Consensus        91 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (401)
T d7aata_          91 AFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDIS  170 (401)
T ss_dssp             HHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHT
T ss_pred             ccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEeccccccccccHHHHHHHHh
Confidence             246677665443     35778888889999999999999999999999999999999995  4567789999888774


Q ss_pred             --cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchh------hhhccCCcEEEEccChh
Q 014492          216 --REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM------EWVKKHDNLIVLRTFSK  283 (423)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~------~~~~~~~~~i~i~S~SK  283 (423)
                        .++++++++++||||||.+++.+++++|++.    +++||+||+|.++.+++...      ......++++++.|+||
T Consensus       171 ~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk  250 (401)
T d7aata_         171 KIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAK  250 (401)
T ss_dssp             TSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTT
T ss_pred             cCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccc
Confidence              2578899999999999999999999999875    99999999999999865321      12234677899999999


Q ss_pred             hhcccCccccccccCHHHHHHHHHhc---------CCCCCcHHHHHHHHHHhCChH-------HHHHHHHHHHHHHHHHH
Q 014492          284 RAGLAGLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALQNPI-------YLEKVKEALIKERERLF  347 (423)
Q Consensus       284 ~~g~~G~R~G~i~~~~~~~~~l~~~~---------~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~  347 (423)
                      .++++|+|+||++++.+.++...+..         ...+.+.+.|.++..++.++.       +.++++++++++|+.+.
T Consensus       251 ~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~  330 (401)
T d7aata_         251 NMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLV  330 (401)
T ss_dssp             TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999876665544322         124677888888888888743       45677788899999999


Q ss_pred             HHHccCCCC----eecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHh
Q 014492          348 KLLKDVPFL----NPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLM  420 (423)
Q Consensus       348 ~~L~~~~~~----~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~  420 (423)
                      +.|++++..    .+.|.+|+|+|+.++     .+++++|+ ++||.+.+|+        |||++  .+++++.+.++|+
T Consensus       331 ~~L~~~~~~~~~~~~~~~~G~F~~~~ls-----~e~~~~L~~e~gV~~~pg~--------Ris~a~~~~~~i~~la~ai~  397 (401)
T d7aata_         331 SNLKKEGSSHNWQHITDQIGMFCFTGLK-----PEQVERLTKEFSIYMTKDG--------RISVAGVASSNVGYLAHAIH  397 (401)
T ss_dssp             HHHHHTTCCSCCHHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHH
T ss_pred             HHHHHhCCCCCcceECCCCeEEEecCCC-----HHHHHHHHHhCCEEECCCc--------EEEeccCCHHHHHHHHHHHH
Confidence            999886531    246889999998663     45667775 8899999986        99986  5667788999988


Q ss_pred             hh
Q 014492          421 HL  422 (423)
Q Consensus       421 ~l  422 (423)
                      ++
T Consensus       398 ~v  399 (401)
T d7aata_         398 QV  399 (401)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-39  Score=314.84  Aligned_cols=338  Identities=17%  Similarity=0.152  Sum_probs=250.5

Q ss_pred             hcccCCCCCCCchHHHHHHhCC-CCCCeeEcCCCC---CC--CCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHH
Q 014492           71 LRKLKPYQPILPFEVLSIQLGR-KPEDIVKIDANE---NP--YGPPPEVREALGQL----KFPYIY-PDPESRRLRAALA  139 (423)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~---~~--~~~~~~v~~al~~~----~~~~~Y-~~~g~~~lr~~ia  139 (423)
                      +.++.++ |.+++..+..++.. +..+.|+|+.|.   +.  .+..+.|.+|...+    ...+.| |..|.++||++++
T Consensus         2 ~~~~~~~-~~dpi~~~~~~~~~d~~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia   80 (397)
T d3tata_           2 FQKVDAY-AGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA   80 (397)
T ss_dssp             CCCCCCC-CCCTTTTHHHHHHHSCCSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHH
T ss_pred             cccCCCC-CCCcHHHHHHHHhcCCCCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHH
Confidence            3445555 55665555554432 224559999983   32  23457888886642    123568 6679999999999


Q ss_pred             HHhC------CCCCcEEEeCCHHHH----HHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC--CCCCCCH
Q 014492          140 KDSG------LESDHILVGCGADEL----IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNV  207 (423)
Q Consensus       140 ~~~g------~~~~~i~~t~G~~~a----l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~  207 (423)
                      +++.      +++++|+++.|++++    +.+++..++.|||.|++++|+|+.|...++..|++++.+|..  .++..|.
T Consensus        81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~  160 (397)
T d3tata_          81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF  160 (397)
T ss_dssp             HHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCH
T ss_pred             HHHhhccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccch
Confidence            9872      356788887766654    556666678999999999999999999999999999999953  4566788


Q ss_pred             HHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh-----hhccCCcEE
Q 014492          208 ELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-----WVKKHDNLI  276 (423)
Q Consensus       208 ~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~-----~~~~~~~~i  276 (423)
                      +.+.+.+..  .+++++++++||||||.+++.+++++|++.    +++||+||+|.++.+++....     .....++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i  240 (397)
T d3tata_         161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL  240 (397)
T ss_dssp             HHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCE
T ss_pred             HHHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceE
Confidence            888877642  467788889999999999999999999875    999999999999987642211     123467899


Q ss_pred             EEccChhhhcccCccccccccCHHHHHHHHH-------hcC--CCCCcHHHHHHHHHHhCChH-------HHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-------AKQ--PYNVSVAAEVAACAALQNPI-------YLEKVKEALI  340 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~-------~~~--~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~  340 (423)
                      ++.|+||.++++|+|+||++++...++...+       ...  ..+.+...|.++..++.+++       +++.++++++
T Consensus       241 ~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (397)
T d3tata_         241 VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRIL  320 (397)
T ss_dssp             ECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCcccccccCccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999986544333222       222  24567778888888887743       3445667777


Q ss_pred             HHHHHHHHHHccCC----CCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHH
Q 014492          341 KERERLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTD  413 (423)
Q Consensus       341 ~~~~~l~~~L~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~  413 (423)
                      ++++.+.+.|....    +....+.+|+|+|+.++     .+++++|. ++||.+.+++        ||+++  .+++++
T Consensus       321 ~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls-----~e~~~~L~~e~~V~l~~g~--------Ri~~a~~~~~~i~  387 (397)
T d3tata_         321 AMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS-----AAQVDRLREEFGVYLIASG--------RMCVAGLNTANVQ  387 (397)
T ss_dssp             HHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCC-----HHHHHHHTTTTCEECCSSS--------CCBTTSCCTTTHH
T ss_pred             HHHHHHHHHHHHhCCCCceEEEcCCCceEEecCcC-----HHHHHHHHHhCCEEeCCCC--------EEEeccCCHHHHH
Confidence            78888888887653    22346789999998764     45677776 7899999876        99986  466678


Q ss_pred             HHHHHHhhh
Q 014492          414 ALMECLMHL  422 (423)
Q Consensus       414 ~l~~al~~l  422 (423)
                      .+.++++.+
T Consensus       388 ~~~~ai~~v  396 (397)
T d3tata_         388 RVAKAFAAV  396 (397)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998764

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=4.7e-38  Score=308.17  Aligned_cols=330  Identities=16%  Similarity=0.182  Sum_probs=245.7

Q ss_pred             CCchHHHHHHhCCCC-CCeeEcCCCC---CCC--CCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHHh-C----
Q 014492           80 ILPFEVLSIQLGRKP-EDIVKIDANE---NPY--GPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G----  143 (423)
Q Consensus        80 ~~~~~~~~~~~~~~~-~~~i~l~~~~---~~~--~~~~~v~~al~~~----~~~~~Y-~~~g~~~lr~~ia~~~-g----  143 (423)
                      .+++..++.++...+ .+.|+|+.|.   ++.  +..+.|++|...+    ...++| |..|.++||+++++++ +    
T Consensus        13 ~d~i~~~~~~~~~d~~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~   92 (412)
T d1yaaa_          13 PDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSD   92 (412)
T ss_dssp             CCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCH
T ss_pred             CChHHHHHHHHhcCCCCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHHHHHHHHHHhcccCc
Confidence            345566777766543 4479999982   332  2347888776542    234679 5569999999999986 2    


Q ss_pred             -CCCCcEE--EeCCHHHHHHHHH--HHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc
Q 014492          144 -LESDHIL--VGCGADELIDLIM--RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER  216 (423)
Q Consensus       144 -~~~~~i~--~t~G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~  216 (423)
                       +.++.++  .+.|+..++..++  ..++.|||.|++++|+|+.|...++..|++++.+|.  +.++..|.+.++..+..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (412)
T d1yaaa_          93 ALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQK  172 (412)
T ss_dssp             HHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHH
T ss_pred             cccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecccccccccccccchhhhccccc
Confidence             1233333  3345555544443  345789999999999999999999999999999994  45677888888887753


Q ss_pred             --CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchh---------hhhccCCcEEEEccC
Q 014492          217 --EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM---------EWVKKHDNLIVLRTF  281 (423)
Q Consensus       217 --~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~---------~~~~~~~~~i~i~S~  281 (423)
                        .+++++++++||||||.+++.+++++|++.    ++++|+||+|.++.+++...         ......++++++.|+
T Consensus       173 ~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  252 (412)
T d1yaaa_         173 APEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSF  252 (412)
T ss_dssp             SCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEEC
T ss_pred             CCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEec
Confidence              456788889999999999999999999875    99999999999998865321         122456889999999


Q ss_pred             hhhhcccCccccccccCHHHHHHHH-----------H--hcCCCCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHH
Q 014492          282 SKRAGLAGLRVGYGAFPLSIIEYLW-----------R--AKQPYNVSVAAEVAACAALQNP-------IYLEKVKEALIK  341 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~~~~~~~~l~-----------~--~~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~  341 (423)
                      ||.|+++|+|+||++++++.++.+.           .  .....+.+.+.|.++..++.++       ++++.+++.+++
T Consensus       253 SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  332 (412)
T d1yaaa_         253 AKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITK  332 (412)
T ss_dssp             TTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998754322111           1  1234578899999999999874       346677888999


Q ss_pred             HHHHHHHHHccCCC----CeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHH
Q 014492          342 ERERLFKLLKDVPF----LNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDA  414 (423)
Q Consensus       342 ~~~~l~~~L~~~~~----~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~  414 (423)
                      +|+.+.+.|++++.    -.+.|.+|+|+|+.+    + .+++++|+ ++||.+.+++        ||+++  .+++++.
T Consensus       333 ~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~l----s-~e~~~~L~~e~~V~~~~g~--------Ris~~g~~~~~i~~  399 (412)
T d1yaaa_         333 MRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL----T-PQMVKRLEETHAVYLVASG--------RASIAGLNQGNVEY  399 (412)
T ss_dssp             HHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC----C-HHHHHHHHHHHCEECCTTS--------EEEGGGCCTTTHHH
T ss_pred             HHHHHHHHHHHhCCCCCCceeCCCceEEEecCc----C-HHHHHHHHHhCCEEECCCC--------EEEeccCCHHHHHH
Confidence            99999999987642    224678999999765    3 35677775 8999998876        99986  4566788


Q ss_pred             HHHHHhhh
Q 014492          415 LMECLMHL  422 (423)
Q Consensus       415 l~~al~~l  422 (423)
                      +.++|+++
T Consensus       400 l~~ai~~v  407 (412)
T d1yaaa_         400 VAKAIDEV  407 (412)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888764

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-37  Score=302.42  Aligned_cols=315  Identities=17%  Similarity=0.171  Sum_probs=239.2

Q ss_pred             CCeeEcCCC---CCC--CCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHHHh----C--CCCC--cEEEeCCHHH
Q 014492           95 EDIVKIDAN---ENP--YGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS----G--LESD--HILVGCGADE  157 (423)
Q Consensus        95 ~~~i~l~~~---~~~--~~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~~~----g--~~~~--~i~~t~G~~~  157 (423)
                      .+.|+|+.|   ++.  .+.+|.|++|+.++   ...+.| |..|.++||+++++++    +  ..++  .++.+.|+..
T Consensus        26 ~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (396)
T d2q7wa1          26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG  105 (396)
T ss_dssp             --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred             CCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHhhcCCcccccceeeeccchHHH
Confidence            346999998   222  34458888887653   234678 5569999999999986    1  1233  3446777766


Q ss_pred             HHHHHHHH--hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCc
Q 014492          158 LIDLIMRC--VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD  231 (423)
Q Consensus       158 al~~~~~~--l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPt  231 (423)
                      ++.+++..  .+++||.|++++|+|+.|...++.+|++++.+|.  ++++..+.+.+++....  .+++++++++|||||
T Consensus       106 ~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~P~NPT  185 (396)
T d2q7wa1         106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPT  185 (396)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTT
T ss_pred             HHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEecccccccccccccchHHHHHHHhccCcEEEEecCCcCCc
Confidence            66555543  4789999999999999999999999999999994  34555677777665532  567888889999999


Q ss_pred             CcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchh-----hhhccCCcEEEEccChhhhcccCccccccccCHHHH
Q 014492          232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-----EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII  302 (423)
Q Consensus       232 G~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~-----~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~  302 (423)
                      |.+++.+++++|++.    +++||+||+|.++.+++...     ......++.+++.|+||.++++|+|+||++++...+
T Consensus       186 G~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~  265 (396)
T d2q7wa1         186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADS  265 (396)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred             CeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccccCCCccccccchhHH
Confidence            999999999999876    99999999999998764321     122346788999999999999999999999986655


Q ss_pred             HHHHHhc---------CCCCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHHHHHHHHccCC----CCeecCCC
Q 014492          303 EYLWRAK---------QPYNVSVAAEVAACAALQNP-------IYLEKVKEALIKERERLFKLLKDVP----FLNPYPSY  362 (423)
Q Consensus       303 ~~l~~~~---------~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~p~~  362 (423)
                      +...+..         ...+.+...|.++..++.++       +++++++++++++|+.+.+.|++++    +..+.+.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~  345 (396)
T d2q7wa1         266 ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQN  345 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCC
T ss_pred             HHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcceecCCC
Confidence            5444321         23467788888888888763       4466778889999999999998875    22346788


Q ss_pred             ceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHHHHhhh
Q 014492          363 SNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALMECLMHL  422 (423)
Q Consensus       363 ~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~al~~l  422 (423)
                      |+|+|+.++     .+++++|. ++||.+.+++        ||+++  .+++++++.++|+++
T Consensus       346 G~F~~~~l~-----~e~~~~L~~e~gV~~~~g~--------Ri~~a~l~~~~i~~~~~ai~~v  395 (396)
T d2q7wa1         346 GMFSFSGLT-----KEQVLRLREEFGVYAVASG--------RVNVAGMTPDNMAPLCEAIVAV  395 (396)
T ss_dssp             SSEEECCCC-----HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHHHHHHH
T ss_pred             eEEEeeCCC-----HHHHHHHHHhCCEEECCCC--------EEEecCCCHHHHHHHHHHHHHh
Confidence            999998663     35567776 8899998876        99997  567789999998864

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=6e-37  Score=300.44  Aligned_cols=335  Identities=15%  Similarity=0.152  Sum_probs=243.4

Q ss_pred             ccCCCCCCCchHHHHHHhCCC-CCCeeEcCCCC---CC--CCCCHHHHHHHhcC----CCCCCC-CCcchHHHHHHHHHH
Q 014492           73 KLKPYQPILPFEVLSIQLGRK-PEDIVKIDANE---NP--YGPPPEVREALGQL----KFPYIY-PDPESRRLRAALAKD  141 (423)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~---~~--~~~~~~v~~al~~~----~~~~~Y-~~~g~~~lr~~ia~~  141 (423)
                      ++++.+ .+++..++.++... ..+.|+|+.|.   ++  .+..|.|.++...+    ...++| |..|.++||++++++
T Consensus         8 ~~~~~~-~~~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~~   86 (412)
T d1ajsa_           8 EVPQAQ-PVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRL   86 (412)
T ss_dssp             TCCCCC-CCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred             hCCcCC-CChHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHHH
Confidence            344443 34456677766554 34679999993   22  23457788775542    233679 667999999999998


Q ss_pred             h-C-----CCCCc--EEEeCCHHHHHHHHHHH-------hcCCCCeEEEcCCCchhhHHHHHHCCCeEEEec---CCCCC
Q 014492          142 S-G-----LESDH--ILVGCGADELIDLIMRC-------VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDF  203 (423)
Q Consensus       142 ~-g-----~~~~~--i~~t~G~~~al~~~~~~-------l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---~~~~~  203 (423)
                      + +     +++++  ++.|.|.+.++..+...       +++|||+|++++|+|+.|...++..|++.+.++   .+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~  166 (412)
T d1ajsa_          87 ALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKR  166 (412)
T ss_dssp             HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTT
T ss_pred             HhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccc
Confidence            6 1     23444  44566666555554443       379999999999999999999999999876654   23456


Q ss_pred             CCCHHHHHHHhh--cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCch------hhhhcc
Q 014492          204 SLNVELIADAVE--REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKK  271 (423)
Q Consensus       204 ~~d~~~l~~~i~--~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~------~~~~~~  271 (423)
                      ..|++.+++.+.  ..+++++++|+||||||.+++.+++++|++.    +++||+||+|.++.+++..      ......
T Consensus       167 ~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~  246 (412)
T d1ajsa_         167 GLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSE  246 (412)
T ss_dssp             EECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred             cccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhh
Confidence            788888877653  2578899999999999999999999999875    9999999999999876532      122345


Q ss_pred             CCcEEEEccChhhhcccCccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCCh-------HHHHHH
Q 014492          272 HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNP-------IYLEKV  335 (423)
Q Consensus       272 ~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~-------~~~~~~  335 (423)
                      .++.+++.|+||.++++|+|+||++++...++.+.+.         ....+.+...|.++..++.+.       ++++.+
T Consensus       247 ~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (412)
T d1ajsa_         247 GFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTM  326 (412)
T ss_dssp             TCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccCCCCCccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            6788999999999999999999999975544433322         123466778888888888763       245667


Q ss_pred             HHHHHHHHHHHHHHHccCCCC----eecCCCceEEEEEeCCCCCHHHHHHHH-HhCCcEEEeCCCCCCCCeEEEEec--C
Q 014492          336 KEALIKERERLFKLLKDVPFL----NPYPSYSNFILCEVTSGMDAKKLKDDL-AKMGVMIRHYNNKELKGYVRVSVG--K  408 (423)
Q Consensus       336 ~~~~~~~~~~l~~~L~~~~~~----~~~p~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~iRis~~--~  408 (423)
                      +++++++|+.+.+.|++++..    .+.+.+|+|.|+.+    +.+ ++++| .++||.+.+++        ||+++  .
T Consensus       327 ~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~l----s~~-~v~~L~~e~gV~~vpg~--------Ri~~ag~~  393 (412)
T d1ajsa_         327 ADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL----NPK-QVEYLINQKHIYLLPSG--------RINMCGLT  393 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC----CHH-HHHHHHHTTCEECCTTS--------EEEGGGCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCC----CHH-HHHHHHHhCCEEEeCCC--------eEEeccCC
Confidence            888999999999999887532    24567899998655    444 44555 58999999876        99986  4


Q ss_pred             hhhHHHHHHHHhh
Q 014492          409 PEHTDALMECLMH  421 (423)
Q Consensus       409 ~~~~~~l~~al~~  421 (423)
                      +++++.+.++|++
T Consensus       394 ~~~i~~~a~aI~~  406 (412)
T d1ajsa_         394 TKNLDYVATSIHE  406 (412)
T ss_dssp             TTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5667666665543

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=1.4e-36  Score=296.10  Aligned_cols=338  Identities=15%  Similarity=0.128  Sum_probs=247.4

Q ss_pred             hcccCCCCCCCchHHHHHHhCCC-CCCeeEcCCCC---C--CCCCCHHHHHHHhcC---CCCCCC-CCcchHHHHHHHHH
Q 014492           71 LRKLKPYQPILPFEVLSIQLGRK-PEDIVKIDANE---N--PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAK  140 (423)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~---~--~~~~~~~v~~al~~~---~~~~~Y-~~~g~~~lr~~ia~  140 (423)
                      +.++++. +.+++..+..++... ..+.|+|+.|.   +  ..+++|.|.+|+.++   ...++| |..|.++||+++++
T Consensus         2 ~~~~~~~-~~d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~   80 (394)
T d2ay1a_           2 LGNLKPQ-APDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE   80 (394)
T ss_dssp             GGGCCCC-CCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred             CCCCCCC-CCChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHH
Confidence            3456666 345666666655433 23579999983   2  223458888888763   234679 66699999999999


Q ss_pred             Hh----CC-CCCcEEEeCCHH--HHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecC--CCCCCCCHHHHH
Q 014492          141 DS----GL-ESDHILVGCGAD--ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIA  211 (423)
Q Consensus       141 ~~----g~-~~~~i~~t~G~~--~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~  211 (423)
                      ++    +. .....+++.|++  .++.+.+..+.++||.|++++|+|+.|...++.+|++++.+|.  +.++..+.+.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~  160 (394)
T d2ay1a_          81 LILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMK  160 (394)
T ss_dssp             HHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHH
T ss_pred             HHhccccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHH
Confidence            86    21 122333444443  4455666667899999999999999999999999999999995  345566777776


Q ss_pred             HHhhc--CCceEEEEcCCCCCcCcCCCHHHHHHHHcC----CCEEEEccCCccccCCCchhh-----hhccCCcEEEEcc
Q 014492          212 DAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME-----WVKKHDNLIVLRT  280 (423)
Q Consensus       212 ~~i~~--~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~----~~~li~Deay~~~~~~~~~~~-----~~~~~~~~i~i~S  280 (423)
                      +....  .+++++++++||||||.+++.+++++|++.    +++||+||+|.++.+++....     ......+.+++.|
T Consensus       161 ~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s  240 (394)
T d2ay1a_         161 ADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAAS  240 (394)
T ss_dssp             HHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred             HHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhccccccccc
Confidence            65532  456777788999999999999999998875    999999999999988653221     1224567899999


Q ss_pred             ChhhhcccCccccccccCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCCh-------HHHHHHHHHHHHHHH
Q 014492          281 FSKRAGLAGLRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQNP-------IYLEKVKEALIKERE  344 (423)
Q Consensus       281 ~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~-------~~~~~~~~~~~~~~~  344 (423)
                      +||.++++|+|+||++++...++...+.         ....+.+...|..+...+.++       ++++.++++++++|+
T Consensus       241 ~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~  320 (394)
T d2ay1a_         241 CSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLRE  320 (394)
T ss_dssp             CTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCCcccccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876555443322         122455666777777777663       345667888899999


Q ss_pred             HHHHHHccCC----CCeecCCCceEEEEEeCCCCCHHHHHHHHH-hCCcEEEeCCCCCCCCeEEEEec--ChhhHHHHHH
Q 014492          345 RLFKLLKDVP----FLNPYPSYSNFILCEVTSGMDAKKLKDDLA-KMGVMIRHYNNKELKGYVRVSVG--KPEHTDALME  417 (423)
Q Consensus       345 ~l~~~L~~~~----~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~iRis~~--~~~~~~~l~~  417 (423)
                      .+.+.|++++    |-.+.|.+|+|+|+.++     .+++++|. ++||.+.+++        ||+++  ++++++.+.+
T Consensus       321 ~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls-----~~~~~~L~~~~~V~~~~g~--------Ri~~a~l~~~~i~~l~~  387 (394)
T d2ay1a_         321 QLAGELRDLSGSDRFGFVAEHRGMFSRLGAT-----PEQVKRIKEEFGIYMVGDS--------RINIAGLNDNTIPILAR  387 (394)
T ss_dssp             HHHHHHHHHHTSSTTTHHHHCCSSEEECCCC-----HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTHHHHHH
T ss_pred             HHHHHHHHhCCCCceeeECCCceeEEecCcC-----HHHHHHHHHhCCEEecCCC--------EEEecCCCHHHHHHHHH
Confidence            9999998753    22345789999998663     45667776 8899999976        99986  5667899999


Q ss_pred             HHhhh
Q 014492          418 CLMHL  422 (423)
Q Consensus       418 al~~l  422 (423)
                      +|+++
T Consensus       388 ai~~v  392 (394)
T d2ay1a_         388 AIIEV  392 (394)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99876

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=2.7e-35  Score=287.09  Aligned_cols=272  Identities=18%  Similarity=0.175  Sum_probs=209.1

Q ss_pred             hHHHHHHHHHHh---C---CCCCcEEEeCCHHHHHHHHHHHh--------cCCCCeEEEcCCCchhhHHHHHHCCCeEEE
Q 014492          131 SRRLRAALAKDS---G---LESDHILVGCGADELIDLIMRCV--------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVK  196 (423)
Q Consensus       131 ~~~lr~~ia~~~---g---~~~~~i~~t~G~~~al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~  196 (423)
                      .++|++.|++++   |   .+..+|++|+|++++|+.++.+|        ++|||+|+++.|+|+.|...++..|.+...
T Consensus       102 ~~~L~~~i~~lh~~~gna~t~~~~IvvG~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~  181 (425)
T d2hoxa1         102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV  181 (425)
T ss_dssp             CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE
T ss_pred             CHHHHHHHHHHHhhhCCCCCCCCEEEECCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCc
Confidence            479999999987   2   24457999999999999999999        578999999999999999999998876544


Q ss_pred             ecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcCCCEEEEccCCccccCCCchhhhhccCCcEE
Q 014492          197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (423)
Q Consensus       197 v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~i  276 (423)
                            |.+|.+.+++.++ .+++++++||||||||.+..      -+..++.+|.||+|.+..+.    ......+++|
T Consensus       182 ------~~~D~~~~~~~~~-~~~~ii~l~sPnNPtG~l~~------~v~~~~~~I~DEaY~~~~f~----~~~~~~~~~I  244 (425)
T d2hoxa1         182 ------WAGNAANYVNVSN-PEQYIEMVTSPNNPEGLLRH------AVIKGCKSIYDMVYYWPHYT----PIKYKADEDI  244 (425)
T ss_dssp             ------EEEEGGGGTTCSC-GGGEEEEEESSCTTTCCCCC------CSSTTCEEEEECTTCSTTTS----CCCSCBCCSE
T ss_pred             ------cCCCHHHHHhhCC-CCceEEEEECCCCCCcchhh------hhhhCCEEEEeccccCcccc----chhhhcCCeE
Confidence                  4456777777775 68999999999999998631      11238999999999743332    2233567889


Q ss_pred             EEccChhhhcccCcccccccc-CHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC------------hHHHHHHHHHHHH
Q 014492          277 VLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN------------PIYLEKVKEALIK  341 (423)
Q Consensus       277 ~i~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~------------~~~~~~~~~~~~~  341 (423)
                      +++||||.||++|+|+||+++ ++.+.+++.+...  .++++.++|.++..+|+.            .++.+..++.+++
T Consensus       245 vl~S~SK~fglaGlRiGw~i~~~~~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~  324 (425)
T d2hoxa1         245 LLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRE  324 (425)
T ss_dssp             EEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHH
T ss_pred             EEEeCHHhccCcchheeeEEeCCHHHHHHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999766 5667777766543  468899999999888864            2456778889999


Q ss_pred             HHHHHHHHHccCCCC---------------eecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC-CCCeEEEE
Q 014492          342 ERERLFKLLKDVPFL---------------NPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE-LKGYVRVS  405 (423)
Q Consensus       342 ~~~~l~~~L~~~~~~---------------~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~-~~~~iRis  405 (423)
                      +++++.+.|++.+..               ...++.+.|+|++... .+.+.+.+.|.++||.+++|..++ .++|+|||
T Consensus       325 r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~-~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRis  403 (425)
T d2hoxa1         325 RWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLS  403 (425)
T ss_dssp             HHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS-GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEE
T ss_pred             HHHHHHHHHHhcCCceeeccCCccceeeeeeccCCCcceeeeeCCC-ChHHHHHHHHHhCCEEEEechhcCCCCCEEEEE
Confidence            999999999876532               1235567789998852 223334555679999999988754 46899999


Q ss_pred             ecChhhHHHHHHHHhhh
Q 014492          406 VGKPEHTDALMECLMHL  422 (423)
Q Consensus       406 ~~~~~~~~~l~~al~~l  422 (423)
                      +...+  +.|.++|++|
T Consensus       404 l~~~~--e~ld~~l~rL  418 (425)
T d2hoxa1         404 LIKTQ--DDFDQLMYYL  418 (425)
T ss_dssp             CSSCH--HHHHHHHHHH
T ss_pred             ecCCH--HHHHHHHHHH
Confidence            98765  3455555554

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.95  E-value=5.4e-27  Score=226.64  Aligned_cols=316  Identities=16%  Similarity=0.121  Sum_probs=227.0

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC-C----C-CCCCCCc-----chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQL-K----F-PYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~----~-~~~Y~~~-----g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      .++|+.+... +.|..+++++.+. .    . ...+...     -..++|+.+|+++|+++++|++|+|+++++++++.+
T Consensus         8 ~~yld~~~~~-~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~~~~~~~   86 (381)
T d1elua_           8 KTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWG   86 (381)
T ss_dssp             SEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHH
T ss_pred             CEEeeCCccc-CCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEECChHHHhhhcchh
Confidence            3778765332 3345677777652 1    1 1122111     134689999999999999999999999999999998


Q ss_pred             h-cCCCCeEEEcCCCchhh----HHHHHHCCCeEEEecCCCCCC--CCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          166 V-LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFS--LNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       166 l-~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~--~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      + .++||.|+++++.|+..    ...++..|++++.+|.+....  .+.+.+++.++ ++++++++++++||||.++|.+
T Consensus        87 l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~-~~t~~v~i~~~~n~tG~~~~~~  165 (381)
T d1elua_          87 LDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-PKTRLVILSHLLWNTGQVLPLA  165 (381)
T ss_dssp             SCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-TTEEEEEEESBCTTTCCBCCHH
T ss_pred             hhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhc-ccccccccccccccccccchhh
Confidence            7 57899999999999743    345566899999999543322  23566777776 7899999999999999999999


Q ss_pred             HHHHHHcC-----CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc----
Q 014492          239 DLLKILEM-----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK----  309 (423)
Q Consensus       239 ~l~~i~~~-----~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~----  309 (423)
                      ++.++|+.     ++++++|.+|+.....    ..+...+..+++.|++|.++ .+.++|+++.+++..+.+....    
T Consensus       166 ~I~~l~~~~~~~~~~~~~vD~~~~~g~~~----~~~~~~~~D~~~~s~~K~~~-~p~G~g~l~~~~~~~~~~~p~~~~~~  240 (381)
T d1elua_         166 EIMAVCRRHQGNYPVRVLVDGAQSAGSLP----LDFSRLEVDYYAFTGHKWFA-GPAGVGGLYIHGDCLGEINPTYVGWR  240 (381)
T ss_dssp             HHHHHHHHCCSSSCCEEEEECTTTBTTBC----CCTTTSCCSEEEEESSSTTC-CCTTCEEEEECTTTGGGCCCCSCCTT
T ss_pred             HHHHHHhhccccccccccccccccccccc----cccccccccccccccccccc-ccchhhHHHhhHHHHHhcCccccccc
Confidence            99999973     7999999998743321    11223345588999999876 4455788888777665443111    


Q ss_pred             --------------------CCCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHccCCCCeecC---CCc
Q 014492          310 --------------------QPYNVSVAAEVAACAALQNP---IYLEKVKEALIKERERLFKLLKDVPFLNPYP---SYS  363 (423)
Q Consensus       310 --------------------~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~  363 (423)
                                          ...+.+.....++.++++..   ...+...++.+++++++.+.|++++++.+..   ..+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  320 (381)
T d1elua_         241 SITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQA  320 (381)
T ss_dssp             TEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSS
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEecCCCCccc
Confidence                                11234555555555555432   1234556788889999999999998776542   345


Q ss_pred             eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          364 NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       364 ~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .++.+.+++..+.+++.+.|.++||.++...   .++++|||++   +.+|++++.++|+++
T Consensus       321 ~~vsf~~~~~~~~~~i~~~L~~~gi~v~~~~---~~~~lRis~~~~nt~edid~ll~~l~e~  379 (381)
T d1elua_         321 GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF  379 (381)
T ss_dssp             SEEEEEECSSSCHHHHHHHHHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             cEEEEEcCCCCCHHHHHHHHHhCCcEEEecC---CCCEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            5777888766788899999999999987644   3689999986   677888888888876

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.9e-26  Score=223.67  Aligned_cols=313  Identities=15%  Similarity=0.114  Sum_probs=221.1

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc-------------chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQL-KFPYIYPDP-------------ESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~-------------g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      |+||.+.. .+.++.+++++.+. .....|+++             ..+++|+.+|+++|+++++|++|+|++++++.++
T Consensus         4 iYlD~aa~-~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~~~   82 (391)
T d1p3wa_           4 IYLDYSAT-TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAI   82 (391)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHH
T ss_pred             EEeeCccc-cCCCHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHHHH
Confidence            68887654 36689999999884 333344332             1236899999999999999999999999999888


Q ss_pred             HHh----cCCCCeEEEcCCCchhhHHHH---HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          164 RCV----LDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       164 ~~l----~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      .++    .++||+|++.++.|+.+...+   +..|+++..+|.+.++.+|+++++++++ ++|++|++++++||||.++|
T Consensus        83 ~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~-~~T~lv~is~~~n~tG~~~~  161 (391)
T d1p3wa_          83 KGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-DDTILVSIMHVNNEIGVVQD  161 (391)
T ss_dssp             HHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-TTEEEEECCSBCTTTCCBCC
T ss_pred             hhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCC-CCcEEEEEECCCCCCeeECC
Confidence            765    479999999999998665443   4579999999988778899999999997 79999999999999999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc------
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK------  309 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~------  309 (423)
                      .++|.++++. |+++++|.+|......-    .+...+..+++.|.+|.+|.+|  +|+++.+++.........      
T Consensus       162 ~~~I~~~~~~~~~~~ivD~~~~~g~~~~----d~~~~~~D~~~~s~~k~~g~~g--~g~~~~~~~~~~~~~~~~~gg~~~  235 (391)
T d1p3wa_         162 IAAIGEMCRARGIIYHVDATQSVGKLPI----DLSQLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQMHGGGHE  235 (391)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTBTTBCC----CTTTSCCSEEEEESTTTTSCSS--CEEEEECBTTBCCCCCSSCSSCTT
T ss_pred             HHHHHHHhccCCcEEEEeeccccCCccc----cchhccccccccccccccCCCc--eEEEEEecchhcccCCcccCCccc
Confidence            9999999998 99999999997543211    1112334477788999877666  577777665433322111      


Q ss_pred             ---CCCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeec---CC-CceEEEEEeCCCCCHHHHHH
Q 014492          310 ---QPYNVSVAAEVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPY---PS-YSNFILCEVTSGMDAKKLKD  381 (423)
Q Consensus       310 ---~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---p~-~~~~~~~~~~~~~~~~~l~~  381 (423)
                         ..+..+.....++...+.. .+......+++++.++++.+.|.+++...+.   +. ....+.+.++ +.+.+.+..
T Consensus       236 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  314 (391)
T d1p3wa_         236 RGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFN-YVEGESLIM  314 (391)
T ss_dssp             TTTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEET-TSCHHHHHH
T ss_pred             cCcccCcchhhhhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEEEeC-CCChHHHHH
Confidence               1123344444443333322 2344555677788888899999887655432   11 2233445555 567788877


Q ss_pred             HHHhCCcEEEeCCCC--------------C-----CCCeEEEEec---ChhhHHHHHHHHhh
Q 014492          382 DLAKMGVMIRHYNNK--------------E-----LKGYVRVSVG---KPEHTDALMECLMH  421 (423)
Q Consensus       382 ~L~~~gI~v~~~~~~--------------~-----~~~~iRis~~---~~~~~~~l~~al~~  421 (423)
                      .|  +++.++.|...              +     ..++||||++   +.+|++++.++|++
T Consensus       315 ~l--~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~  374 (391)
T d1p3wa_         315 AL--KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRK  374 (391)
T ss_dssp             HT--TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             Hh--CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            76  45666544320              0     1257999987   67788888888775

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.95  E-value=1.1e-27  Score=230.19  Aligned_cols=310  Identities=13%  Similarity=0.058  Sum_probs=210.2

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      .++++....+.++..+...+++...    ..|..+.+++++..++.++.+ .+++++++|+++++..++.++..+|+.|+
T Consensus        21 ~i~~~~gl~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a~~~~l~al~~~~~vi~   96 (366)
T d2aeua1          21 ALYDLSGLSGGFLIDEKDKALLNTY----IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILALKPKKVIHY   96 (366)
T ss_dssp             GCEECSSCCCCCCCCHHHHHHHTST----THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHCCSEEEEE
T ss_pred             hHhhhccCCCCCCccHHHHHHHHHh----cCchhhHHHHHHHHHHHccCCCccEEEEeCCHHHHHHHHHHHhCCCCEEEE
Confidence            4678887777787777777766432    113335678999999988764 57899999999999999998764444444


Q ss_pred             E-cCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC-cCCCHHHHHHHHcC-CCEEE
Q 014492          175 D-CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDEDLLKILEM-PILVV  251 (423)
Q Consensus       175 ~-~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG-~~~~~~~l~~i~~~-~~~li  251 (423)
                      + +.|+|+.+...++..|++++...       |+++++++++ +++|+|++++|+||++ ...+++++.+||+. |+++|
T Consensus        97 ~~~~~~~~~~~~~~~l~g~~~v~~~-------d~e~l~~~i~-~~tk~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i  168 (366)
T d2aeua1          97 LPELPGHPSIERSCKIVNAKYFESD-------KVGEILNKID-KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVF  168 (366)
T ss_dssp             CSSSSCCTHHHHHHHHTTCEEEEES-------CHHHHHTTCC-TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEE
T ss_pred             ecCCCcchhHHHHHHhcCCeEECCC-------CHHHHHHhcC-CCceEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEE
Confidence            4 35899999999999999876432       7999999997 7999999999999754 23344455555555 99999


Q ss_pred             EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCCh
Q 014492          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNP  329 (423)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~  329 (423)
                      +||+|..+.++..........+..+++.|+||.+  +|+|+||+++++++++++......  ++.+++.|.++..+|+..
T Consensus       169 ~De~y~~~~~~~~~~~~~~~~~~di~~~S~sK~~--~g~~~G~i~~~~~~i~~~~~~~~~~g~~~~~~~~~a~~~aL~tl  246 (366)
T d2aeua1         169 VDDASGARVRLLFNQPPALKLGADLVVTSTDKLM--EGPRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNF  246 (366)
T ss_dssp             EECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSS--SSCSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHC
T ss_pred             EecCccccccccccCCCHhhcCceEEEecccccc--cccceeEEEecHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhc
Confidence            9999986442111000011123348889999964  699999999999999999876644  567888888888777531


Q ss_pred             --HHHHHHHHHHHH----HHHHHHHHHccCCCC---eecCCCceEEEEEeCCC-----CCHHHHHHHHH-hCCcEEEeCC
Q 014492          330 --IYLEKVKEALIK----ERERLFKLLKDVPFL---NPYPSYSNFILCEVTSG-----MDAKKLKDDLA-KMGVMIRHYN  394 (423)
Q Consensus       330 --~~~~~~~~~~~~----~~~~l~~~L~~~~~~---~~~p~~~~~~~~~~~~~-----~~~~~l~~~L~-~~gI~v~~~~  394 (423)
                        ..+++..+..+.    ..+++..........   ...+..+.|++......     .+..+++..|. ++||.+.|+.
T Consensus       247 ~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~  326 (366)
T d2aeua1         247 NLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVA  326 (366)
T ss_dssp             CHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTS
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCCcceeecccCHHHHHHHHHHhCCEEEEECC
Confidence              112222222221    222233333333222   23445677777766422     13556777776 7799998876


Q ss_pred             C-CCCCCeEEEEecChh----hHHHHHHHH
Q 014492          395 N-KELKGYVRVSVGKPE----HTDALMECL  419 (423)
Q Consensus       395 ~-~~~~~~iRis~~~~~----~~~~l~~al  419 (423)
                      . ++.++++||+++..+    +.+.+.+++
T Consensus       327 ~~p~~~~~lRis~~~~~~~~i~~d~l~~ai  356 (366)
T d2aeua1         327 GMPGASKSLRIDLTSRDAERIDDNYIIKAI  356 (366)
T ss_dssp             SSCSSCCSEEEETTSGGGGGSCHHHHHHHH
T ss_pred             CCCCCCCEEEEeccccchhhCCHHHHHHHH
Confidence            5 567889999998643    346666666

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.1e-25  Score=217.05  Aligned_cols=318  Identities=16%  Similarity=0.111  Sum_probs=238.7

Q ss_pred             CCCCeeEcCCC-CCCCCCCHHHHHHHhcC--CCCCC-------CCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDAN-ENPYGPPPEVREALGQL--KFPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~-~~~~~~~~~v~~al~~~--~~~~~-------Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      .++++++|+++ .-.+..+|+++++..+.  .++.+       ++. .-..+|++.+|+++|.  +..++.+++..+...
T Consensus        36 ~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~g~--e~al~~~SG~~an~~  113 (383)
T d1bs0a_          36 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGY--SRALLFISGFAANQA  113 (383)
T ss_dssp             TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHH
T ss_pred             CCeEEEEEEcccccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhcCC--CceEEecccchhhHH
Confidence            35678999875 34456789888776652  12111       222 2357899999999995  466777777888889


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc--CCceEEEEcCCCCCcCcCCCHHH
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      ++.+++.++|.|++....|..+...++..+.+++.++     ..|++++++.+.+  .+.++|+++++++++|.+.|.++
T Consensus       114 ~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~-----hnd~~~le~~l~~~~~~~~~vv~e~v~s~~G~i~pl~~  188 (383)
T d1bs0a_         114 VIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFA-----HNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAE  188 (383)
T ss_dssp             HHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEEC-----TTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHH
T ss_pred             HHHhhcCCCceEEeeccccHHHhhccccCCCcceEec-----chHHHHHHHHhcccCCCceEEEecCCCCCCCcccchhH
Confidence            9999999999999999999999999999999999887     4578888888754  34668888899999999999999


Q ss_pred             HHHHHcC-CCEEEEccCCccccCCCchh---hhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----
Q 014492          240 LLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----  311 (423)
Q Consensus       240 l~~i~~~-~~~li~Deay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----  311 (423)
                      +.+|++. |+++++||+|+.+..+....   .... ....+++.|++|++|..|   |++.++.++++.++....+    
T Consensus       189 l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~-~~~~~~~~t~~ka~g~~G---g~v~~~~~~~~~l~~~~~~~~~s  264 (383)
T d1bs0a_         189 IQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQK-VKPELLVVTFGKGFGVSG---AAVLCSSTVADYLLQFARHLIYS  264 (383)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTT-CCCSEEEEESSSTTSSCC---EEEEECHHHHHHHHHHCHHHHSS
T ss_pred             HHHHHHhcCcEEEeecceeeeecCCcccchHHHcC-Cccccccccccccccccc---cccccchhHHHHHHhhchhhhhc
Confidence            9999997 99999999999876544322   2222 334467789999999888   9999999999988765443    


Q ss_pred             CCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcE
Q 014492          312 YNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVM  389 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~  389 (423)
                      ...++....++.++++.  ....+..++++.++..++.+.|+++++ .+.++.++++.+.+.+...+.++.+.|+++||+
T Consensus       265 ~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~-~~~~~~s~Ii~v~~g~~~~a~~~~~~L~~~Gi~  343 (383)
T d1bs0a_         265 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLADSCSAIQPLIVGDNSRALQLAEKLRQQGCW  343 (383)
T ss_dssp             BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECSCCSSBCCEEEESHHHHHHHHHHHHHTTEE
T ss_pred             ccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCC-ccCCCCCCEEEEEECCHHHHHHHHHHHHHCCce
Confidence            24455555555555432  233466777888999999999999885 445666666666665444566889999999999


Q ss_pred             EEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          390 IRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      +.+..+   +.+...+||++.   +.+++|++.++|+.+
T Consensus       344 v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         344 VTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            987655   345668999997   666777777777654

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=4.7e-25  Score=214.65  Aligned_cols=319  Identities=18%  Similarity=0.200  Sum_probs=238.8

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCC-----------cchHHHHHHHHHHhCC-CCCcEEEeCCHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDL  161 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~-----------~g~~~lr~~ia~~~g~-~~~~i~~t~G~~~al~~  161 (423)
                      +++++|+.+... +.|+.+.+++.+. ...+..|.           ...++.|+.+++++|. ++++|++++|++++++.
T Consensus        21 ~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~~~~T~~~~~   99 (405)
T d1jf9a_          21 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINL   99 (405)
T ss_dssp             EECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHH
T ss_pred             CCeEEEeCcccc-CCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcccccccCcHHHHHHH
Confidence            457899887654 5678888888762 11111111           0145789999999996 45899999999999998


Q ss_pred             HHHHh----cCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCc
Q 014492          162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS  233 (423)
Q Consensus       162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~  233 (423)
                      ++..+    ..+||.|++.+-.|+.    +...++..|++++.+|.+.+..+|++.+++++. ++++++++++.+|.||.
T Consensus       100 ~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~-~~t~lv~~~~v~~~tG~  178 (405)
T d1jf9a_         100 VANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-EKTRLLAITHVSNVLGT  178 (405)
T ss_dssp             HHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-TTEEEEEEESBCTTTCC
T ss_pred             HHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCCCcCCHHHHHHhcc-CCcEEEEEecCCCcccc
Confidence            88753    5789999999999974    455566789999999988888999999999997 79999999999999999


Q ss_pred             CCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc---
Q 014492          234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---  309 (423)
Q Consensus       234 ~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~---  309 (423)
                      ++|.+++.++++. |+++++|.+++.....-.    +...+-.+++.|+.|.+|..|  +|+++.+++..+.+....   
T Consensus       179 ~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id----~~~~~~D~~~~s~hK~~Gp~G--~g~l~v~~~~~~~~~~~~~~~  252 (405)
T d1jf9a_         179 ENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD----VQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEMPPWEGGG  252 (405)
T ss_dssp             BCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCSS--CEEEEECHHHHTTCCCSSCSS
T ss_pred             cCchHHhhhHHHHcCCeeecccceeccccccc----hhhcCCceeeccccccccCCC--ceeeeechhhhcccCcccccc
Confidence            9999999999997 999999999984432111    112334489999999877556  788999988766432111   


Q ss_pred             ---------------------CCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec-C-CCce
Q 014492          310 ---------------------QPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY-P-SYSN  364 (423)
Q Consensus       310 ---------------------~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p-~~~~  364 (423)
                                           ...+.+..+..++..+++..  ...+...++.+...+++.+.++.++..... | ..+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~~~~~~~~r~~  332 (405)
T d1jf9a_         253 SMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG  332 (405)
T ss_dssp             SSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCS
T ss_pred             cccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCcccccCCcCcCc
Confidence                                 12356677777777777532  125667777778888888899888766543 2 2345


Q ss_pred             EEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          365 FILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       365 ~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .+.+.++ +.++.++...|.++||.++.|..        .+.+++||||++   +.+|.+++.++|+++
T Consensus       333 ivsf~~~-~~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i  400 (405)
T d1jf9a_         333 VIAFNLG-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRI  400 (405)
T ss_dssp             EEEEEET-TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEcC-CCCHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            6667787 67888999999999999987654        245789999986   567788888888765

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=6.9e-25  Score=210.05  Aligned_cols=303  Identities=17%  Similarity=0.181  Sum_probs=202.6

Q ss_pred             CCHHHHHHHhcCCCCC---CCC---------Cc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEE
Q 014492          109 PPPEVREALGQLKFPY---IYP---------DP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (423)
Q Consensus       109 ~~~~v~~al~~~~~~~---~Y~---------~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~  175 (423)
                      .++++++++.+...++   .|.         .+ -.+.+++.+|+++|.  +++++|+|+++++..++.++++|||.|++
T Consensus        14 l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~--e~~~~t~g~t~a~~~~~~al~~~gd~Vi~   91 (364)
T d2e7ja1          14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC--DVARVTNGAREAKFAVMHSLAKKDAWVVM   91 (364)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS--SEEEEESSHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHhCc--CEEEEECcHHHHHHHHHHHHhCCCcEEEe
Confidence            3578888887632111   111         11 135689999999996  68999999999999999999999999999


Q ss_pred             cCCCchhhHHHHHHCCCeEEEecCC--CCCCCCHHHHHHHhhc----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CC
Q 014492          176 CPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI  248 (423)
Q Consensus       176 ~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~  248 (423)
                      +.++|......++..|++++.+|.+  .++.+|++++++.+++    .++++|++++|+||||.+.+.+++.++|+. |+
T Consensus        92 ~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i  171 (364)
T d2e7ja1          92 DENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDV  171 (364)
T ss_dssp             ETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTC
T ss_pred             ecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeecchhheeccccccc
Confidence            9999988878888999999999964  3678999999999853    345688899999999999999999999998 99


Q ss_pred             EEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCC----------CCcHHH
Q 014492          249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----------NVSVAA  318 (423)
Q Consensus       249 ~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~----------~~~~~~  318 (423)
                      ++++|++|+.........    ..+.++++.|++|.++.+| ++||++.++++++.+.+....+          ......
T Consensus       172 ~livD~a~~~g~~~~~~~----~~g~D~~~~S~~K~~~~~g-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (364)
T d2e7ja1         172 PLLVNGAYAIGRMPVSLK----EIGADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGAT  246 (364)
T ss_dssp             CEEEECTTTBTTBCCCHH----HHTCSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHH
T ss_pred             hhhccccchhhhhhhccc----ccccceeeeccccccCCCC-CEEEEEECHHHHHHHHhhccccCcccccccccccchhH
Confidence            999999997443221111    1223488899999998666 7999999988777665433221          111222


Q ss_pred             HHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCee--cCCCceEEEEEeCC--------CCCHHHHHHHHHhCC
Q 014492          319 EVAACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNP--YPSYSNFILCEVTS--------GMDAKKLKDDLAKMG  387 (423)
Q Consensus       319 ~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~~~~~~~~~~~--------~~~~~~l~~~L~~~g  387 (423)
                      ..++.+.+.. .++++...+. .++++++.+.|+++++...  .+......++..+.        ......+...|.+.|
T Consensus       247 ~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  325 (364)
T d2e7ja1         247 IITLMASFPHVRERIKRWDEE-VEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRK  325 (364)
T ss_dssp             HHHHHHHHHHHHHHGGGHHHH-HHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCeecCCCCCCcceEEEeccchHHHHHHhhccchHHHHHHHhcC
Confidence            2223333321 1222223333 3456677888888765433  23334444444431        111223444555666


Q ss_pred             cEEEeCCCCCCCCeEEEEe-c-ChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNKELKGYVRVSV-G-KPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~~~~~~iRis~-~-~~~~~~~l~~al~~l  422 (423)
                      +....   ++....+|++. + +.++++++.++|+++
T Consensus       326 ~~~~~---~g~~~~~~~~~~~~t~edid~~~~~l~ei  359 (364)
T d2e7ja1         326 IHGIK---PGLTRYFKLSTYGLSDEEVDYVLNAFKEI  359 (364)
T ss_dssp             EECSC---TTCCSEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred             Cceec---CCCcceEEEeccCCCHHHHHHHHHHHHHH
Confidence            64322   23356777763 3 556778888888764

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.93  E-value=1.2e-25  Score=216.00  Aligned_cols=318  Identities=19%  Similarity=0.120  Sum_probs=229.3

Q ss_pred             CCCeeEcCCC-CCCCCCCHHHHHHHhcC--CCCCC-------CCCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           94 PEDIVKIDAN-ENPYGPPPEVREALGQL--KFPYI-------YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        94 ~~~~i~l~~~-~~~~~~~~~v~~al~~~--~~~~~-------Y~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ++++++|++| .-.+..+|+++++..+.  .++.+       ++.. -..+|++.+|+++|.  +..++.+++..+...+
T Consensus        44 ~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~--e~all~~sG~~An~~~  121 (396)
T d2bwna1          44 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK--EAALVFSSAYNANDAT  121 (396)
T ss_dssp             EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHH
T ss_pred             CeEEEEEEcccccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHhCC--CceeeeecchHHHHHH
Confidence            3578999876 44567789888776652  11111       1222 256899999999995  3445555555566666


Q ss_pred             HHHh--cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhh---cCCceEEEEcCCCCCcCcCCCH
Q 014492          163 MRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       163 ~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      +.++  ..++|.|+...-.|......++..+++++.++.     .|.+++++.+.   +.+.++|++....+++|.+.|.
T Consensus       122 i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~H-----nd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~apl  196 (396)
T d2bwna1         122 LSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRH-----NDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPI  196 (396)
T ss_dssp             HHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECT-----TCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCH
T ss_pred             HHHHhcccCCCceeehhhhhhccchhhhccccCceEeec-----chHHHhhhHHhhhcccCceeEEEEeeccCccccccc
Confidence            6666  468899999999999999999999999999872     35566655553   2455677778999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCchh---hhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC-
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLESRM---EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-  311 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~---~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-  311 (423)
                      +++.+|++. |+++++||+|+....++...   .... ..+..++++||||+||..|   ||+.+++++++.+.....+ 
T Consensus       197 ~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~~~~i~~l~~~~~~~  273 (396)
T d2bwna1         197 KEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGF  273 (396)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHH
T ss_pred             HhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchhHHHHHHHHhhcchh
Confidence            999999998 99999999999876543221   1111 2345689999999999998   9999999999999876554 


Q ss_pred             -C--CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHH-h
Q 014492          312 -Y--NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLA-K  385 (423)
Q Consensus       312 -~--~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~-~  385 (423)
                       |  .+++....++.++++-  .+..++.+..++.+.+++.+.|.+.++. +.++.+..+.+.+.+...+.++.+.|+ +
T Consensus       274 ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~-~~~~~spIvpv~ig~~~~~~~~a~~lL~e  352 (396)
T d2bwna1         274 IFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMP-IIDHGSHIVPVVIGDPVHTKAVSDMLLSD  352 (396)
T ss_dssp             HTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCC-BCCCSSSCEEEECCCHHHHHHHHHHHHHH
T ss_pred             hhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhcCCC-cCCCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence             2  3455555555554442  2334566778888899999999887643 345667777777754445567777765 7


Q ss_pred             CCcEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          386 MGVMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       386 ~gI~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      +||.+.+..+   +.+...+||+++   +.++++++.++|+++
T Consensus       353 ~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         353 YGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             HCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHh
Confidence            8999987655   455678999987   566677777777765

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.4e-24  Score=210.39  Aligned_cols=320  Identities=15%  Similarity=0.165  Sum_probs=237.5

Q ss_pred             CCCCeeEcCCCC-CCCCCCHHHHHHHhcC--CCCCCC-------CCc-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           93 KPEDIVKIDANE-NPYGPPPEVREALGQL--KFPYIY-------PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~~--~~~~~Y-------~~~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +++++|+|.+++ -.+..+|+++++..+.  .++.++       +.. -..+|++.+++++|.  +.+++++++.++...
T Consensus        43 dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~g~--e~al~~~SG~~An~~  120 (401)
T d1fc4a_          43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM--EDAILYSSCFDANGG  120 (401)
T ss_dssp             TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHT
T ss_pred             CCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhhcC--CceEEecchhhhhHH
Confidence            567899998753 4567789998887652  122222       122 356899999999995  578889999999999


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHh---hc--CCceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV---ER--EKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i---~~--~~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++.++++++|.|++..-.|..+...+...++++..++.     .|.+++++.+   ++  .+..+|++.+..+..|.+.+
T Consensus       121 ~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~-----~d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~  195 (401)
T d1fc4a_         121 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN  195 (401)
T ss_dssp             THHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC
T ss_pred             HHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcC-----CChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhh
Confidence            99999999999999999999998889999999988872     3555555544   32  33456666788899999999


Q ss_pred             HHHHHHHHcC-CCEEEEccCCccccCCCc---hhhhhc-cCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP  311 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~  311 (423)
                      ++++.+|++. |+++|+||+|..+..+..   ...... ..+..+++.|++|++|  |...|++.++.++++.+.....+
T Consensus       196 L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~g--g~~Gg~v~g~~~~~~~l~~~~~~  273 (401)
T d1fc4a_         196 LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALG--GASGGYTAARKEVVEWLRQRSRP  273 (401)
T ss_dssp             HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC--SSSCEEEEECHHHHHHHHHHCHH
T ss_pred             hhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccc--cCCcccccCCHHHHHHHHcCChh
Confidence            9999999998 999999999998775432   222222 2345688999999984  33349999999999988765433


Q ss_pred             ----CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCC
Q 014492          312 ----YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMG  387 (423)
Q Consensus       312 ----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~g  387 (423)
                          ..+++....++..+++.....++.+++++++.+++.+.+...+.. ...+.+..+.+.+.+...+.++.+.|+++|
T Consensus       274 ~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~-~~~~~~pIv~v~~~~~~~a~~~~~~L~~~G  352 (401)
T d1fc4a_         274 YLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFT-LAGADHAIIPVMLGDAVVAQKFARELQKEG  352 (401)
T ss_dssp             HHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTTCC-BCCSSSSEEEEEEECHHHHHHHHHHHHHTT
T ss_pred             hhhcCCCCHHHHHHHHhhhcccccCHHHHHHHHHHHHHHHhhhcccCCc-cCCCCCCEEEEEECCHHHHHHHHHHHHHCC
Confidence                356777777777777654444677888999999999999888743 345566777777754445667899999999


Q ss_pred             cEEEeCCC---CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNN---KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~---~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      |.+.+..+   +.+...|||+++   +.++++++.++++++
T Consensus       353 i~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev  393 (401)
T d1fc4a_         353 IYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRI  393 (401)
T ss_dssp             EECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            99987554   445667999987   566666676666654

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.92  E-value=3.8e-23  Score=201.20  Aligned_cols=320  Identities=19%  Similarity=0.196  Sum_probs=236.6

Q ss_pred             CCCeeEcCCCCCCCCCCHHHHHHHhcC-C--CC--C--CCCC-----cchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           94 PEDIVKIDANENPYGPPPEVREALGQL-K--FP--Y--IYPD-----PESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~--~--~Y~~-----~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      ++++++|+.+... +.++.+++++.+. .  +.  +  .|..     .-.++.|+.+++++|++ ++.|+++++++++++
T Consensus        20 ~~~~iYld~a~~~-~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~~~~tt~~~n   98 (408)
T d1t3ia_          20 GHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAIN   98 (408)
T ss_dssp             TEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHH
T ss_pred             CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEeecchHHHHH
Confidence            3567999987665 4678888887662 1  11  1  1111     11347899999999996 578999999999999


Q ss_pred             HHHHH----hcCCCCeEEEcCCCchh----hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcC
Q 014492          161 LIMRC----VLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG  232 (423)
Q Consensus       161 ~~~~~----l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG  232 (423)
                      +++..    -.++||+|++.+-.|+.    +...++..|.++..+|.+.+...|.+.+++.++ +++++|.+++.+|.||
T Consensus        99 ~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~-~~t~lv~i~~~~~~tG  177 (408)
T d1t3ia_          99 LVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-EKTKLVTVVHISNTLG  177 (408)
T ss_dssp             HHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-TTEEEEEEESBCTTTC
T ss_pred             HHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccccccccHHHhhhccC-CCceEEEEeccccccc
Confidence            98865    35789999999988874    334456679999999987777889999999997 7999999999999999


Q ss_pred             cCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc--
Q 014492          233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK--  309 (423)
Q Consensus       233 ~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~--  309 (423)
                      .++|.+++.++++. |+++++|.+++.....-.    +...+-.+++.|..|.+|.+|  +|+++.+++.........  
T Consensus       178 ~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id----~~~~~~D~~~~s~hK~~gp~G--~g~l~v~~~~~~~~~p~~~g  251 (408)
T d1t3ia_         178 CVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD----VQLIDCDWLVASGHKMCAPTG--IGFLYGKEEILEAMPPFFGG  251 (408)
T ss_dssp             BBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC----HHHHTCSEEEEEGGGTTSCTT--CEEEEECHHHHHHSCCCSCS
T ss_pred             ccCcHHHHhhhhhccCceeeeccceeccccccc----ccccCCceEEeccccccCCCC--ccccccchhhhhcCCceecC
Confidence            99999999999987 999999999984432111    122333488899999765444  799999998876542111  


Q ss_pred             ---------------------CCCCCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeec------C
Q 014492          310 ---------------------QPYNVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPY------P  360 (423)
Q Consensus       310 ---------------------~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~------p  360 (423)
                                           ...+.+.....++..+++..  ...++..++..++.+++.+.+++++...+.      .
T Consensus       252 ~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  331 (408)
T d1t3ia_         252 GEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHG  331 (408)
T ss_dssp             TTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGS
T ss_pred             CcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhccCccccccCCCcccc
Confidence                                 12355667777777766531  225667778888889999999888766542      1


Q ss_pred             CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCC--------CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          361 SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNN--------KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~--------~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ..+..+.+.++ +.+..++...|.++||.++.|..        ...+++||||++   +.+|.|++.++|+++
T Consensus       332 ~~~~iv~f~~~-~~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~  403 (408)
T d1t3ia_         332 DRAALASFNVA-GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT  403 (408)
T ss_dssp             CBCSEEEEEET-TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CcceEEEEEeC-CCCHHHHHHHHhhCCcEEecCcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHH
Confidence            23456667776 67899999999999999987653        244678999986   677788888877753

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=2e-23  Score=200.92  Aligned_cols=314  Identities=20%  Similarity=0.195  Sum_probs=213.3

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-CCCCCCCCc----------chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH-
Q 014492           98 VKIDANENPYGPPPEVREALGQL-KFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC-  165 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~~~----------g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~-  165 (423)
                      |+|+.+.. -++++.+.|++.+. ....+.|..          ..++.|+++++++|+++++|++++|+++++..++.. 
T Consensus         3 iyld~a~~-~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~~~~   81 (376)
T d1eg5a_           3 VYFDNNAT-TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTV   81 (376)
T ss_dssp             EECBTTTC-CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHH
T ss_pred             EEEECccc-ccCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHhhhhcc
Confidence            67776443 33467888887662 211111211          134678999999999999999999999999998864 


Q ss_pred             ---hcCCCCeEEEcCCCchhhHHH---HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          166 ---VLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       166 ---l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                         ...+|+.|++....|+.+...   ++..|++++.+|.+.++.+|+++++++++ +++++|++++++|+||...+.++
T Consensus        82 ~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~-~~t~lv~is~v~~~tG~~~~~~~  160 (376)
T d1eg5a_          82 AETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-EDTFLVSIMAANNEVGTIQPVED  160 (376)
T ss_dssp             HHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-TTEEEEEEESBCTTTCBBCCHHH
T ss_pred             cccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCCCCeECHHHHHHhcC-CCceEEEEECCccccceeeeehh
Confidence               356788888888888755543   45569999999988888999999999997 79999999999999999999999


Q ss_pred             HHHHHcC---CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC------
Q 014492          240 LLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ------  310 (423)
Q Consensus       240 l~~i~~~---~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~------  310 (423)
                      +.++++.   ++++++|.++......    ..+...+..+++.|++|.+|.+|..++|+.  ++.  .+.....      
T Consensus       161 i~~~~~~~~~~~~~~vD~~q~~g~~~----~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~--~~~--~~~p~~~g~~~~~  232 (376)
T d1eg5a_         161 VTRIVKKKNKETLVHVDAVQTIGKIP----FSLEKLEVDYASFSAHKFHGPKGVGITYIR--KGV--PIRPLIHGGGQER  232 (376)
T ss_dssp             HHHHHHHHCTTCEEEEECTTTTTTSC----CCCTTTCCSEEEEEGGGGTSCTTCEEEEEC--TTS--CCCCSBCSSCTTT
T ss_pred             hhhhhhhcccCceeEEEeeecccccc----ccccccCccceecccceeecCCCceeEEec--cCc--ccCCcccCCCCcc
Confidence            9999753   8999999998743321    112234556899999998887886655543  321  1111110      


Q ss_pred             ---CCCCcHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHccCCCCeecC---CCceEEEEEeCCCCCHHHHHHHH
Q 014492          311 ---PYNVSVAAEVAACAALQNP-IYLEKVKEALIKERERLFKLLKDVPFLNPYP---SYSNFILCEVTSGMDAKKLKDDL  383 (423)
Q Consensus       311 ---~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p---~~~~~~~~~~~~~~~~~~l~~~L  383 (423)
                         ....+......+....... ...............++.+.|.........+   .......+.++ +.++..+...|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L  311 (376)
T d1eg5a_         233 GLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFP-NIRGSTLQNLL  311 (376)
T ss_dssp             TTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECT-TCCHHHHHHHH
T ss_pred             cccCCcccchhhhhHHHHhhccccchhhhhhhhhhhhhhhccccccccccccccccccccceeeeccC-CCCHHHHHHHH
Confidence               1123344443333333221 1234445556667777888887665333222   22233445555 67889999999


Q ss_pred             HhCCcEEEeCCCC--------------CC-----CCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          384 AKMGVMIRHYNNK--------------EL-----KGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       384 ~~~gI~v~~~~~~--------------~~-----~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .++||.++.|...              +.     .++||||++   +.+|+|++.++|+++
T Consensus       312 ~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~i  372 (376)
T d1eg5a_         312 SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEI  372 (376)
T ss_dssp             HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             hhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            9999999876430              11     247999986   677888888888764

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=1.2e-22  Score=191.37  Aligned_cols=314  Identities=16%  Similarity=0.198  Sum_probs=208.7

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcCCCC-CCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           97 IVKIDANENPYGPPPEVREALGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~~~~-~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      +|||.. ++-..|+|++++|+.+...+ ..| +++...+|++.+|+++|.  +++++++|+++++..++++++++||.++
T Consensus         1 ~~~~~~-~~~t~p~p~v~~A~~~a~~g~~~yg~~p~~~~le~~lA~~~G~--~~~~~~~sGt~A~~~al~a~~~~g~~~~   77 (343)
T d1m6sa_           1 MIDLRS-DTVTKPTEEMRKAMAQAEVGDDVYGEDPTINELERLAAETFGK--EAALFVPSGTMGNQVSIMAHTQRGDEVI   77 (343)
T ss_dssp             CEECSC-GGGCCCCHHHHHHHHTCCCCCGGGTCCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred             Cccccc-ccCCCCCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHHHCC--CeEEEeCCHHHHHHHHHHHHhccCCcee
Confidence            366643 34445679999999885543 335 778889999999999995  4688889999999999999999999999


Q ss_pred             EcCCCchhhH---HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEE-cCCCCCcCcCCCHHHHHHHHc
Q 014492          175 DCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFL-TSPNNPDGSIINDEDLLKILE  245 (423)
Q Consensus       175 ~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l-~~p~NPtG~~~~~~~l~~i~~  245 (423)
                      +..+.|..+.   ..+...+..+..++.+ .+..|++.++..+..     .++..+++ +.++|+.|.+.+.+++.+|++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  156 (343)
T d1m6sa_          78 LEADSHIFWYEVGAMAVLSGVMPHPVPGK-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICT  156 (343)
T ss_dssp             EETTCHHHHSSTTHHHHHTCCEEEEECEE-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHH
T ss_pred             ccccccceeeecccccccccceeeccccc-cCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHHH
Confidence            9999886433   3445567777777753 346799999998863     23444444 478899999999999998886


Q ss_pred             C----CCEEEEccCCccccCCC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC--CCCcHH
Q 014492          246 M----PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVA  317 (423)
Q Consensus       246 ~----~~~li~Deay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~~~~~  317 (423)
                      .    ++++++|++|..+....  ............++.. .+|  +..|.+.|+++...+.+.........  ++.+..
T Consensus       157 ~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (343)
T d1m6sa_         157 IAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFC-LSK--GLCAPVGSVVVGDRDFIERARKARKMLGGGMRQA  233 (343)
T ss_dssp             HHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEE-SSS--TTCCSSCEEEEECHHHHHHHHHHHHHHTCCCSST
T ss_pred             HHHhcCeEEEeccccccccccccccchhhhcccccccccc-ccc--cccccccccccccHHHHhhhHhhCcccccccchh
Confidence            4    99999999998654211  1111111222223333 333  34566678888888877666554322  222222


Q ss_pred             HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCC-eecCCCceEEEEEeCC-CCCHHHHHHHHHhCCcEEEeCCC
Q 014492          318 AEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFL-NPYPSYSNFILCEVTS-GMDAKKLKDDLAKMGVMIRHYNN  395 (423)
Q Consensus       318 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~p~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~  395 (423)
                      ...++........ .....+...++..++.+.+.+++.. ...|.+++++++++++ +.++.+|++.|+++||.+++.+ 
T Consensus       234 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~l~~~L~~~Gi~v~~~~-  311 (343)
T d1m6sa_         234 GVLAAAGIIALTK-MVDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAVS-  311 (343)
T ss_dssp             HHHHHHHHHHHHH-SSTTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEEE-
T ss_pred             HHHHHhhhhhhhh-hHHHHHHHHHHHHHhhhHHHHhccCccCCCCCceEEEEEeCCCcccHHHHHHHHHHCCCEEecCC-
Confidence            2222221111111 1111222334444555555554433 3456778999999874 5688999999999999998865 


Q ss_pred             CCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          396 KELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       396 ~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                         ++++||+++   +.+++|++.++|+++
T Consensus       312 ---~~~iRi~~~~~~t~edid~~v~~l~~v  338 (343)
T d1m6sa_         312 ---DTEIRLVTHKDVSRNDIEEALNIFEKL  338 (343)
T ss_dssp             ---TTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             ---CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence               578999886   467778888777764

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=4.1e-22  Score=185.87  Aligned_cols=313  Identities=13%  Similarity=0.070  Sum_probs=200.1

Q ss_pred             EcCCCCCCCCCCHHHHHHHhcC--CCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEE
Q 014492           99 KIDANENPYGPPPEVREALGQL--KFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD  175 (423)
Q Consensus        99 ~l~~~~~~~~~~~~v~~al~~~--~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~  175 (423)
                      +| .|+|+++++|+|++|+.+.  .+..+| +++..+++|+.+++++|.++++|++|+|+++++..++..++.+++.+++
T Consensus         3 ~f-~nd~~~g~~P~v~eAl~~~~~~~~~~y~~~~~~~~lr~~ia~~~g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~   81 (340)
T d1svva_           3 SF-VNDYSVGMHPKILDLMARDNMTQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEAVIA   81 (340)
T ss_dssp             EC-SCSCSSCCCHHHHHHHHHHTTCCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEE
T ss_pred             Cc-ccCCCCCCCHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHHhhhcccccc
Confidence            45 5689999999999999873  334567 4566789999999999999899999999999999999999999999999


Q ss_pred             cCCCchhhHHH--HHHCCCeEEEecCCCCCCCCHHHHHHHhhc-----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC--
Q 014492          176 CPPTFTMYEFD--AAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM--  246 (423)
Q Consensus       176 ~~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--  246 (423)
                      ..+.|..+...  ....+.....+..... ..+.+........     ..+..++++.+.|..|.+.+.+++..+++.  
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (340)
T d1svva_          82 TQLGHISTHETGAIEATGHKVVTAPCPDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCK  160 (340)
T ss_dssp             ETTSHHHHSSTTHHHHTTCCEEEECCTTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHH
T ss_pred             ccccceeeeecccccccceeeeecccccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhcccc
Confidence            88888644322  2224444444443222 3344443333321     123345555455557778888887766654  


Q ss_pred             --CCEEEEccCCccccC--CC--chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHH----HHHhcCCCCCcH
Q 014492          247 --PILVVLDEAYTEFSG--LE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY----LWRAKQPYNVSV  316 (423)
Q Consensus       247 --~~~li~Deay~~~~~--~~--~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~----l~~~~~~~~~~~  316 (423)
                        +.++++|++|.....  ..  ....... ....+...+..|..+..+  .++..........    ............
T Consensus       161 ~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (340)
T d1svva_         161 EHGLYLFLDGARLASALSSPVNDLTLADIA-RLTDMFYIGATKAGGMFG--EALIILNDALKPNARHLIKQRGALMAKGW  237 (340)
T ss_dssp             HHTCEEEEECTTHHHHHTSTTCCCCHHHHH-HHCSEEEEECTTTTCSSC--EEEEECSGGGCTTHHHHHHHTTCCCTTTH
T ss_pred             cccceeeeeccceeeeeccccccccccccc-ccceeeecCCcccccccc--ccccccchhhhhhhhhhcccccCccchhh
Confidence              999999999964321  11  1111111 112244444555444333  3444433322222    222222234445


Q ss_pred             HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCC
Q 014492          317 AAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNK  396 (423)
Q Consensus       317 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~  396 (423)
                      ....++...++... .....++...+++++.+.|++.++..+.|++++++++.++     .+..+.|.++++........
T Consensus       238 ~~~aa~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~v~~~~~-----~~~~~~l~~~~~~~~~~~~~  311 (340)
T d1svva_         238 LLGIQFEVLMKDNL-FFELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILE-----NTMIAELNNDFDMYTVEPLK  311 (340)
T ss_dssp             HHHHHHHHHTSTTH-HHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE-----HHHHHHHTTTEECEEEEEET
T ss_pred             HHHHHHHHHhhhhH-HHHHHHHHHHHHhhhHHHHhcCCCeeecCCCceEEEEeCC-----HHHHHHHHHhhhhhcccccC
Confidence            55555556665544 3455667788899999999998876667899999999885     35666776665443322223


Q ss_pred             CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          397 ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       397 ~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ..+++|||+++   +++++|++.++|++|
T Consensus       312 ~~~~~vR~s~~~~~t~edid~~l~~l~~l  340 (340)
T d1svva_         312 DGTCIMRLCTSWATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             TTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred             CCCcEEEEECCCCCCHHHHHHHHHHHhcC
Confidence            44789999875   677888888888875

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7e-22  Score=190.75  Aligned_cols=317  Identities=13%  Similarity=0.122  Sum_probs=229.0

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           98 VKIDANENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      +-|.-|  |...+++|+++|.....+|+-++.  -..++|+.+++++|++.+ .|+++.|++++++.++..++.+|+.++
T Consensus        21 ~l~~pG--P~~~~~~Vl~am~~~~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~~~~~~~~   98 (388)
T d1h0ca_          21 LLLGPG--PSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLEPGDSFL   98 (388)
T ss_dssp             EECSSS--CCCCCHHHHHHHTCCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCSSCCEE
T ss_pred             ccccCC--CCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhhccCCcee
Confidence            445543  445679999999764444554332  267899999999998644 689999999999999999999999999


Q ss_pred             EcCCCchhh--HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEE
Q 014492          175 DCPPTFTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVV  251 (423)
Q Consensus       175 ~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li  251 (423)
                      +....+...  ...+...+..++.++.+....+|.+++++.+.+.+++++++++.+|.||.+.|.+++.++++. |++++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~  178 (388)
T d1h0ca_          99 VGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLL  178 (388)
T ss_dssp             ECBSSHHHHHHHHHHHHHC--CBCCBCCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHTTTCEEE
T ss_pred             eecccceeeeeccccccccccccccccCCccccchHHHHHHhccCCcceEEEeeeeeccccccCHHHHHHHhhcccccce
Confidence            888887633  344455777777777777778999999988877789999999999999999999999999998 99999


Q ss_pred             EccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcC---------------------
Q 014492          252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ---------------------  310 (423)
Q Consensus       252 ~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~---------------------  310 (423)
                      +|.+++.....-    .+...+.++++.|..|.++.++ .+|+++.++..++.+.....                     
T Consensus       179 vD~~qs~g~~~~----d~~~~~~D~~~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (388)
T d1h0ca_         179 VDSVASLGGTPL----YMDRQGIDILYSGSQKALNAPP-GTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQ  253 (388)
T ss_dssp             EECTTTTTTSCC----CTTTTTCSEEEEESSSTTCCCT-TCEEEEECHHHHHHHTTCSSCCSCSTTCHHHHHHHTTCSSS
T ss_pred             eccccccccccc----cccccccceecccccccccCCC-ceEEEeecHHHHHhhhhccccccccccccchhhhhhhhccc
Confidence            999988443211    1223344578888889875433 36777788877766542110                     


Q ss_pred             ----CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC----CceEEEEEeCCCCCHHHHH
Q 014492          311 ----PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS----YSNFILCEVTSGMDAKKLK  380 (423)
Q Consensus       311 ----~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~----~~~~~~~~~~~~~~~~~l~  380 (423)
                          ..+++.....+...++..  ...++...++.+++.+++++.++..+.....+.    ....+.+.+|++.+..++.
T Consensus       254 ~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~g~~~~~~~~~~rs~~i~~~~~p~~~~~~~~~  333 (388)
T d1h0ca_         254 PRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAGYDWRDIV  333 (388)
T ss_dssp             CCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHH
T ss_pred             cccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhcCcccccCCHHHcCCeEEEEECCCCCCHHHHH
Confidence                123445555555555543  122567777778888888888887664332221    2245678888889999999


Q ss_pred             HHHH-hCCcEEEeCCCCCCCCeEEEE-ec---ChhhHHHHHHHHhh
Q 014492          381 DDLA-KMGVMIRHYNNKELKGYVRVS-VG---KPEHTDALMECLMH  421 (423)
Q Consensus       381 ~~L~-~~gI~v~~~~~~~~~~~iRis-~~---~~~~~~~l~~al~~  421 (423)
                      +.|. ++||.++.|......+.|||| ++   +.++++++.++|+.
T Consensus       334 ~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~  379 (388)
T d1h0ca_         334 SYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRA  379 (388)
T ss_dssp             HHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             HHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence            9987 679999987654446789999 54   45677888777765

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=1.6e-20  Score=176.38  Aligned_cols=314  Identities=13%  Similarity=0.071  Sum_probs=209.9

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCC--CCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLK--FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK  172 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~--~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~  172 (423)
                      +.++|. ++|.++.+|+|++|+.+..  +..+| +++...++|+.+++++|. +..+++|+|+++++..++..++.+++.
T Consensus         3 ~~~~f~-s~n~~g~~P~v~~A~~~a~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~v~f~~sGt~An~~a~~~~~~~~~~   80 (345)
T d1v72a1           3 PALGFS-SDNIAGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIFER-DVEVFLVPTGTAANALCLSAMTPPWGN   80 (345)
T ss_dssp             CCCBCS-CGGGCCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHHTS-CCEEEEESCHHHHHHHHHHTSCCTTEE
T ss_pred             CCcCcC-CCCCCCCCHHHHHHHHHHhccCccccCCCHHHHHHHHHHHHHHCC-CcEEEECCchHHHHHHHHHHHHhcCCc
Confidence            457887 4788899999999998743  33445 666788999999999996 457899999999999999988888888


Q ss_pred             EEEcCCCchhh---HHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceE-EEEcCCCCCcCcCCCHHHHHHH
Q 014492          173 IVDCPPTFTMY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKC-IFLTSPNNPDGSIINDEDLLKI  243 (423)
Q Consensus       173 Vl~~~p~y~~~---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~-i~l~~p~NPtG~~~~~~~l~~i  243 (423)
                      +++....+...   .......+..+..++.+.+...+++.+++.+.+.     .+.. ++.+.+.|+.|...+.+++.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  160 (345)
T d1v72a1          81 IYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAI  160 (345)
T ss_dssp             EEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHH
T ss_pred             cccccccceeeechhhHHHhcCcccccccccccccccHHHhhhhhcccccccccccceeeeeeccccccccccchhhhhH
Confidence            88777666432   2334456778888876667789999999998642     2333 4444788889999999888887


Q ss_pred             HcC----CCEEEEccCCccccCCC----chhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHH-H-hcCC--
Q 014492          244 LEM----PILVVLDEAYTEFSGLE----SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-R-AKQP--  311 (423)
Q Consensus       244 ~~~----~~~li~Deay~~~~~~~----~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~-~-~~~~--  311 (423)
                      ++.    |+++++|+++..+....    ........ .......+..|..+ .+.+.+ +........... . ....  
T Consensus       161 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~  237 (345)
T d1v72a1         161 GDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKA-GVDALSFGATKNGV-LAAEAI-VLFNTSLATEMSYRRKRAGHL  237 (345)
T ss_dssp             HHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGG-TCCEEEECCGGGTC-SSCEEE-EESSGGGHHHHHHHHHHTTCC
T ss_pred             HHHHHhcCceeeecccccceeccccccCHHHhhccc-cccccccCcccccc-cccccc-ccchhhhhhhccccccccccc
Confidence            553    99999999997543111    11111111 22233334444332 222222 222222221111 1 1112  


Q ss_pred             CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCCCHHHHHHHHHhCCcEE
Q 014492          312 YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGMDAKKLKDDLAKMGVMI  390 (423)
Q Consensus       312 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v  390 (423)
                      .........++...+.+.. ..+...+..++..++...+.+++++.+ .|.++++++++++     .++.+.|+++||.+
T Consensus       238 ~~~~~~aa~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~~~niv~~~~~-----~~~~~~L~~~gi~v  311 (345)
T d1v72a1         238 SSKMRFLSAQIDAYLTDDL-WLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----SAMIDALLKAGFGF  311 (345)
T ss_dssp             CSSTHHHHHHHHHHTSTTH-HHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----HHHHHHHHHTTCBC
T ss_pred             cchhhHHhhhhHHHHHHhh-hhhhccchhhHHHHHHHHHHhcCCcEeccCCCccEEEEEcC-----HHHHHHHHHcCCCc
Confidence            2333444444444454443 445556666777888889999987764 5788999999986     46788899999988


Q ss_pred             EeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          391 RHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       391 ~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ....  ..++.+||+++   +.+++|.+.++|++.
T Consensus       312 ~~~~--~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         312 YHDR--WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             BCSS--SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             cccC--CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            6443  34689999987   677778888887764

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=5.5e-20  Score=176.93  Aligned_cols=309  Identities=15%  Similarity=0.101  Sum_probs=218.6

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCcc--hHHHHHHHHHHhC----CCCCcEEEeCCHHHHHHHHHHHhc---CCCCeEEE
Q 014492          105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSG----LESDHILVGCGADELIDLIMRCVL---DPGDKIVD  175 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Y~~~g--~~~lr~~ia~~~g----~~~~~i~~t~G~~~al~~~~~~l~---~~gd~Vl~  175 (423)
                      .|.+.+++|++||.....+|+-+...  ..++++.+.+.++    .+++.|++|+|++++++.++..++   ++||+|++
T Consensus        10 GP~~v~~~V~~Am~~~~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~vlv   89 (382)
T d2bkwa1          10 GPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLV   89 (382)
T ss_dssp             SSCCCCHHHHHTTSCCCCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEE
T ss_pred             CCCCCCHHHHHHhCcccCCCCcHHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCceEE
Confidence            34455789999987643334333322  4566777777765    356789999999999999999986   57899998


Q ss_pred             cCCCchh--hHHHHHHCCCeEEEec-CCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCE
Q 014492          176 CPPTFTM--YEFDAAVNGAAVVKVP-RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL  249 (423)
Q Consensus       176 ~~p~y~~--~~~~~~~~g~~~~~v~-~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~  249 (423)
                      ..-.+..  +...++..|.....+. .+.+...+.+.+++.+.+.+++++++++.+|.||...+.+++.++++.   +++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~~  169 (382)
T d2bkwa1          90 VSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETF  169 (382)
T ss_dssp             ECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSE
T ss_pred             EEechhhhhhhhhccccccccccccccCCCCccchhHHHHHhhhccchheeeeeccccccccccchhhhhhcccccccee
Confidence            8766653  4455666888887775 445667889999988877889999999999999999999999998864   799


Q ss_pred             EEEccCCccccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHHh--------------------
Q 014492          250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA--------------------  308 (423)
Q Consensus       250 li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~~--------------------  308 (423)
                      +++|.+++.....    -.+...+-++++.|..|.+ |.+|  +|+++.+++.++.+...                    
T Consensus       170 ~~vDa~qs~g~~p----id~~~~giD~~~~s~~K~l~gP~G--~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (382)
T d2bkwa1         170 FVVDAVCSIGCEE----FEFDEWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIM  243 (382)
T ss_dssp             EEEECTTTTTTSC----CCTTTTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHH
T ss_pred             eeeeccccccccc----ccccccCeeEEeecccccCcCCCc--hhhhhccHHHHhhhhhcccCCCcccchhhhhhhhhhh
Confidence            9999998844321    1122344558888999987 5667  68999988877654211                    


Q ss_pred             --------cCCCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCee---cCCC---ceEEEEEeCC
Q 014492          309 --------KQPYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNP---YPSY---SNFILCEVTS  372 (423)
Q Consensus       309 --------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---~p~~---~~~~~~~~~~  372 (423)
                              ..+++++.....++..+|+.  .+..+...++.+++++++++.+.+......   .+..   ...+.+.++ 
T Consensus       244 ~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~~~-  322 (382)
T d2bkwa1         244 ENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVA-  322 (382)
T ss_dssp             HHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECS-
T ss_pred             hcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhccCCcEEEEcCC-
Confidence                    11246777777777777754  233556667777788888888876433322   1221   123456665 


Q ss_pred             CCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEE-ec---ChhhHHHHHHHHhhh
Q 014492          373 GMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVS-VG---KPEHTDALMECLMHL  422 (423)
Q Consensus       373 ~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis-~~---~~~~~~~l~~al~~l  422 (423)
                        +..++.+.|.++||.+..|... ..++.+||+ ++   +.++.+++.++|+.+
T Consensus       323 --~~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i  375 (382)
T d2bkwa1         323 --DPPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLI  375 (382)
T ss_dssp             --CHHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHH
T ss_pred             --CHHHHHHHHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHH
Confidence              5788999999999999987553 345789998 54   455667788877765

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=1.1e-19  Score=172.33  Aligned_cols=305  Identities=15%  Similarity=0.128  Sum_probs=212.9

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCc-h
Q 014492          105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-T  181 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y-~  181 (423)
                      .|...+++|++||.+...+|+-+..  -..+.++.+++.++.+.+.++++.|++.++++++..++.+||+|++..-.+ .
T Consensus         7 GP~~v~~~V~~am~~~~~~hr~~~f~~i~~~~~~~l~~ll~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv~~~G~f~   86 (348)
T d1iuga_           7 GPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFS   86 (348)
T ss_dssp             SSCCCCHHHHHHHHSCCCCTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHH
T ss_pred             CCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHhcccccccceeecchHHH
Confidence            3456679999999874333332222  256889999999998778899999999999999999999999888766654 3


Q ss_pred             -hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccCCc
Q 014492          182 -MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYT  257 (423)
Q Consensus       182 -~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Deay~  257 (423)
                       .+...++.+|..+..+..+.+..+++++    ..+.+++.+++++..+.||...+.+++.++++.   +.++++|.+.+
T Consensus        87 ~~~~~~a~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~v~~~h~eTstG~~~~i~~i~~~~~~~~~~~l~~vDavss  162 (348)
T d1iuga_          87 ERFYEIALEAGLVVERLDYPYGDTPRPED----VAKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTS  162 (348)
T ss_dssp             HHHHHHHHHTTCEEEEEECCTTCCCCTTT----SCCSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTT
T ss_pred             HHHHHHHHhcCcccccccccCCCcccccc----ccccCCCeeEEEecchhhhhhccHHHHHHHHHhhhccceeechhhhc
Confidence             4556677789888888765554555433    234688999999999999999999999999975   68999999887


Q ss_pred             cccCCCchhhhhccCCcEEEEccChhhh-cccCccccccccCHHHHHHHHH----------------hcCCCCCcHHHHH
Q 014492          258 EFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWR----------------AKQPYNVSVAAEV  320 (423)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~-g~~G~R~G~i~~~~~~~~~l~~----------------~~~~~~~~~~~~~  320 (423)
                      ..... -   .++..+-.+++.|-.|.+ |.+|  +|+++.+++.++++..                -..+++++....+
T Consensus       163 ~g~~~-i---~~d~~~iD~~~~~sqK~l~gppG--~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i~  236 (348)
T d1iuga_         163 LLVGE-V---ALEAMGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVL  236 (348)
T ss_dssp             BTTBC-C---CSGGGTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHH
T ss_pred             ccccc-c---ccccccCCEEEeccccceecCCc--eeeeeechHHHhhhcccccccchhhhhhhhccCcccccccchHHH
Confidence            44321 1   122334458888889998 7777  6889988887764321                1234677887887


Q ss_pred             HHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC-c-eEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCC
Q 014492          321 AACAALQN-PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY-S-NFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKE  397 (423)
Q Consensus       321 a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~-~-~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~  397 (423)
                      ++..+|+. .+...+..++.+..++.+...+++.+ +...+.. . ..+.+.+|++.+..++.+.|.++||.+.+|...-
T Consensus       237 ~l~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~~~~~s~~v~~~~~P~g~~~~~~~~~l~~~gi~i~~G~~~l  315 (348)
T d1iuga_         237 AVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGG-LRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPL  315 (348)
T ss_dssp             HHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTT-CEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGGG
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhh-hccChhhcCCeEEEEECCCCCCHHHHHHHHHHCCeEEEcCcccc
Confidence            77777753 11233333333334444555555544 4443332 1 2467889989999999999999999998876544


Q ss_pred             CCCeEEEEec---ChhhHHHHHHHHh
Q 014492          398 LKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       398 ~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      ....+||+..   ..++++.+.++|+
T Consensus       316 ~~~~~RIg~mG~~~~~d~~~~~~~l~  341 (348)
T d1iuga_         316 KGKVFRLSLMGAYDRYEALGVAGMFR  341 (348)
T ss_dssp             TTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            4568999843   4445555555444

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.84  E-value=4.4e-19  Score=169.98  Aligned_cols=313  Identities=16%  Similarity=0.133  Sum_probs=221.2

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      .|...++.|++||......|+-+..  -..++|+.+++++|.+. ..|++++|++++++.++..++.+|+++++..-.+.
T Consensus        25 GP~~v~~~Vl~am~~~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~~~~~~~~  104 (377)
T d1vjoa_          25 GPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYF  104 (377)
T ss_dssp             SCCCCCHHHHHHHSSCCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHH
T ss_pred             CCCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhccccccccceeeechh
Confidence            4455579999999764443432222  26789999999999854 57788889999999999999999999888777765


Q ss_pred             --hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492          182 --MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (423)
Q Consensus       182 --~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~  258 (423)
                        .+...++..+.....+..+.+...+.+..+....+.+++++.+++.+|.||.+.+.+++.++++. |.++++|.+++.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa~~~~  184 (377)
T d1vjoa_         105 GNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSL  184 (377)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTT
T ss_pred             hhhhhhhhhhhcccccccccCCCCcccchhhhhhhhcCcceeeeeeeeeccceeeechhhhhhhhhhccceEEEecchhh
Confidence              34445556777777777656666777777777666789999999999999999999999999997 999999999974


Q ss_pred             ccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCC----------------------CCCcH
Q 014492          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----------------------YNVSV  316 (423)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~----------------------~~~~~  316 (423)
                      ....    ..++..+-.+++.|..|.++.+ -.+|+++..+..++........                      ...+.
T Consensus       185 g~~~----~~~~~~~~d~~~~s~~K~~~gp-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (377)
T d1vjoa_         185 GGVP----IFLDAWGVDLAYSCSQKGLGCS-PGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPI  259 (377)
T ss_dssp             TTSC----CCTTTTTCSEEECCSSSTTCSC-SSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCH
T ss_pred             hhhh----hcccccccceeeecccccccCC-CEEEEecchhhHHhhhhccCCCCcceeeccchhhhccCcccccccccce
Confidence            3321    1122344557888889976533 2467777788777765432211                      12233


Q ss_pred             HHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCCCCCHHHHHHHHH-hCCcEE
Q 014492          317 AAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTSGMDAKKLKDDLA-KMGVMI  390 (423)
Q Consensus       317 ~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~~~~~~~l~~~L~-~~gI~v  390 (423)
                      ....++..+...  ....+...++.+++.+.+.+.+.+.+...+.+.   ....+.+.+|++.+.+++...|. ++||.+
T Consensus       260 ~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~v  339 (377)
T d1vjoa_         260 NLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEV  339 (377)
T ss_dssp             HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEEC
T ss_pred             echhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEEE
Confidence            333333333322  223567777788888889999887654332221   22356677888899999999986 779999


Q ss_pred             EeCCCCCCCCeEEEE-ec---ChhhHHHHHHHHhhh
Q 014492          391 RHYNNKELKGYVRVS-VG---KPEHTDALMECLMHL  422 (423)
Q Consensus       391 ~~~~~~~~~~~iRis-~~---~~~~~~~l~~al~~l  422 (423)
                      ..|......+.+||+ ++   +.+++++|.++|+++
T Consensus       340 ~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~  375 (377)
T d1vjoa_         340 GGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQV  375 (377)
T ss_dssp             EECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             ecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHH
Confidence            887654456789999 34   466788888888764

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.84  E-value=3.5e-19  Score=169.72  Aligned_cols=309  Identities=10%  Similarity=0.009  Sum_probs=210.9

Q ss_pred             CCCCCHHHHHHHhcCCCCCCCC--CcchHHHHHHHHHHhCCCCCc--EEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          106 PYGPPPEVREALGQLKFPYIYP--DPESRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       106 ~~~~~~~v~~al~~~~~~~~Y~--~~g~~~lr~~ia~~~g~~~~~--i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      |.+.++.|++|+.....+++-+  ..-.+++|+.+++++|++++.  +++++|+|++++.++..+..+++.+++....+.
T Consensus         8 P~~~~~~V~~A~~~~~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~~~~~~~~   87 (361)
T d1m32a_           8 PLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAY   87 (361)
T ss_dssp             SCCCCHHHHHTTCCCCCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHH
T ss_pred             CCCCCHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHhhhhccccceeeehhh
Confidence            5556788998887532222211  223678999999999997765  778899999999999999988887776665553


Q ss_pred             --hhHHHHHHCCCeEEEecCCCCCCCCH--HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCC
Q 014492          182 --MYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY  256 (423)
Q Consensus       182 --~~~~~~~~~g~~~~~v~~~~~~~~d~--~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay  256 (423)
                        .....++..+.....+........+.  +....... .+++++.+++.+|.||...|.+++.++|+. |+++++|.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa~q  166 (361)
T d1m32a_          88 GARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD-PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMS  166 (361)
T ss_dssp             HHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTT
T ss_pred             hhhHHHHhhhhhcccccccccccCCccchhhHHHHHhc-cCccceEEEeeecccccchhhhhhhhhhcccceeeEeeccc
Confidence              23334455566666655433333333  33333343 789999999999999999999999999998 9999999999


Q ss_pred             ccccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHh--------------------cCCCCCc
Q 014492          257 TEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRA--------------------KQPYNVS  315 (423)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~--------------------~~~~~~~  315 (423)
                      +.....-    .+...+.++++.|..|.++ .+|  +|+++.+++..+.....                    ...++.+
T Consensus       167 s~G~~~~----d~~~~~~D~~~~s~~K~l~gp~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~  240 (361)
T d1m32a_         167 SFGGIPM----DIAALHIDYLISSANKCIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSP  240 (361)
T ss_dssp             TTTTSCC----CTTTTTCSEEEEESSSTTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCC
T ss_pred             ccCcccc----cccccccceEEeeecccccCCCC--ceEEEechhhhhhhccccccccccchhhhccccccccccCCCCC
Confidence            8543211    1234556688899999874 346  68888776655432211                    1123455


Q ss_pred             HHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCC---CceEEEEEeCC--CCCHHHHHHHHHhCC
Q 014492          316 VAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPS---YSNFILCEVTS--GMDAKKLKDDLAKMG  387 (423)
Q Consensus       316 ~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~---~~~~~~~~~~~--~~~~~~l~~~L~~~g  387 (423)
                      .....+...++..   ....+...++.++..+.+.+.++..+.....+.   ....+.+.+|+  +.+..++.+.|.++|
T Consensus       241 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs~~v~~~~~p~~~~~~~~~~~~~l~~~g  320 (361)
T d1m32a_         241 THTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQG  320 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTT
T ss_pred             chhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcCCcEEEEECCCCCCCCHHHHHHHHHHCC
Confidence            6665555555543   223455666777777888888887764432221   12344567764  467899999999999


Q ss_pred             cEEEeCCCCCCCCeEEEEe---cChhhHHHHHHHHhhh
Q 014492          388 VMIRHYNNKELKGYVRVSV---GKPEHTDALMECLMHL  422 (423)
Q Consensus       388 I~v~~~~~~~~~~~iRis~---~~~~~~~~l~~al~~l  422 (423)
                      |.+..|.. ...+++||+.   .+.+|++++.++|+..
T Consensus       321 i~i~~G~~-~~~~~~Ris~~g~~~~~di~~lv~al~~~  357 (361)
T d1m32a_         321 FVIYPGKV-SQSDCFRIGNIGEVYAADITALLTAIRTA  357 (361)
T ss_dssp             EECEECCC-SSSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             cEEECCCc-CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            99988753 3467899993   4677788888888753

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.83  E-value=4e-19  Score=171.09  Aligned_cols=311  Identities=16%  Similarity=0.132  Sum_probs=216.5

Q ss_pred             CCCCCCHHHHHHHhcCCCCCCCCCc--chHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCch
Q 014492          105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT  181 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~~~~~~Y~~~--g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~  181 (423)
                      .|...+++|++||.....+++-++.  -..++|+.++++++++.. .|+++.|++.+++.++..++.+|+.+++..-.+.
T Consensus        24 GP~~~~~~V~~Am~~~~~~hr~~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl~~~~g~~  103 (388)
T d2ch1a1          24 GPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIW  103 (388)
T ss_dssp             SSCCCCHHHHHHTTSCCCCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHH
T ss_pred             CCCCCCHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhccccccccccccccc
Confidence            4445579999999774333433322  256899999999998655 4667788999999999999999999887766664


Q ss_pred             h--hHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492          182 M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (423)
Q Consensus       182 ~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~  258 (423)
                      .  +...++..+...+.+..+++...+.+..+......+++++++++.+|.||...+.+++.++++. +.++++|.+++.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~~ss~  183 (388)
T d2ch1a1         104 AERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASL  183 (388)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTB
T ss_pred             cccchhhhhhhcccccccccccccccchhhhhhhhccCCcceeeeeecccccccccchhhhcchhccccceeeeeeeecc
Confidence            3  3344566888888888777777888888888776789999999999999999999999999987 999999999884


Q ss_pred             ccCCCchhhhhccCCcEEEEccChhhhc-ccCccccccccCHHHHHHHHHhc-------------------------CCC
Q 014492          259 FSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAK-------------------------QPY  312 (423)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~-------------------------~~~  312 (423)
                      +..    ...++..+.++++.|-.|.++ .+|  +|+++.++..++......                         .++
T Consensus       184 g~~----pid~~~~~~d~~~~s~~K~~~gp~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (388)
T d2ch1a1         184 CGV----PFYMDKWEIDAVYTGAQKVLGAPPG--ITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHH  257 (388)
T ss_dssp             TTB----CCCTTTTTCCEEECCCC-CCCCCSS--CEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCC
T ss_pred             ccc----ccchhccCceEEEEccccccCCCCe--EEEEeccHHHHHhhhcccCccccccccchhhhhhhcccccccccCc
Confidence            432    112234555688888899764 334  677888887777554221                         113


Q ss_pred             CCcHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHccCCCCeecC----CCceEEEEEeCCCCCHHHHHHHHH-h
Q 014492          313 NVSVAAEVAACAALQNP--IYLEKVKEALIKERERLFKLLKDVPFLNPYP----SYSNFILCEVTSGMDAKKLKDDLA-K  385 (423)
Q Consensus       313 ~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p----~~~~~~~~~~~~~~~~~~l~~~L~-~  385 (423)
                      +.+.....++..+++..  .......++.+.........+...+.....+    .....+.+.+|++.+..++...|. +
T Consensus       258 t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~~~~p~g~~~~~l~~~l~~~  337 (388)
T d2ch1a1         258 TVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNN  337 (388)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhcccccccCCHHHhCCeEEEEECCCCCCHHHHHHHHhhc
Confidence            34555555555555431  2233444444444445555554433222111    123456788988999999999987 6


Q ss_pred             CCcEEEeCCCCCCCCeEEEE-ec---ChhhHHHHHHHHhh
Q 014492          386 MGVMIRHYNNKELKGYVRVS-VG---KPEHTDALMECLMH  421 (423)
Q Consensus       386 ~gI~v~~~~~~~~~~~iRis-~~---~~~~~~~l~~al~~  421 (423)
                      +||.+..|......+.+||+ ++   +.++++.+.++|++
T Consensus       338 ~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke  377 (388)
T d2ch1a1         338 FSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKE  377 (388)
T ss_dssp             HCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred             CCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHH
Confidence            79999987654445689999 54   45667778777765

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.82  E-value=5.6e-18  Score=160.83  Aligned_cols=234  Identities=18%  Similarity=0.159  Sum_probs=175.1

Q ss_pred             CCCHHHHHHHhcCCCCCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH
Q 014492          108 GPPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE  184 (423)
Q Consensus       108 ~~~~~v~~al~~~~~~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~  184 (423)
                      ....+..+....-..++.|   .+|....|++.+++..|-  +..+++++++.|+..++..++++||+|+++...|....
T Consensus        39 ~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~LE~~la~LEgg--~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~  116 (397)
T d1y4ia1          39 DSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG--EAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTH  116 (397)
T ss_dssp             SSHHHHHHHHHSCSSSSCCCTTSCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHH
T ss_pred             CCHHHHHHhhcCCcCCceeeCCCCHHHHHHHHHHHHHhCC--ccceeehHHHHHHHHHHhhccCCCCeeeeecccccccc
Confidence            3334444444332333444   566678999999999974  45677888899999999999999999999999997443


Q ss_pred             H----HHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc
Q 014492          185 F----DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF  259 (423)
Q Consensus       185 ~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~  259 (423)
                      .    ....+|+++..++.     -|++.++++++ +++|+|++.+|.||+..+.+++.+.++++. |+++++|..+...
T Consensus       117 ~~~~~~l~~~Gi~~~~vd~-----~d~~~~~~~i~-~~Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvDnT~atP  190 (397)
T d1y4ia1         117 AFLSHSMPKFGINVRFVDA-----GKPEEIRAAMR-PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSP  190 (397)
T ss_dssp             HHHHTHHHHTTCEEEEECT-----TSHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred             hhhhcccCCCceEeeccCC-----CCHHHHHHhcC-CCCcEEEecCCcccceeecccHHHHHHhhcCCceEEecCcccCc
Confidence            3    34568999999873     36899999997 799999999999999999999999999997 9999999998743


Q ss_pred             cCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHH--Hhc--CCCCCcHHHHHHHHHHhCChHHHHH
Q 014492          260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLW--RAK--QPYNVSVAAEVAACAALQNPIYLEK  334 (423)
Q Consensus       260 ~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~--~~~--~~~~~~~~~~~a~~~~l~~~~~~~~  334 (423)
                      ... .+.    ..+..|++.|++|.++--+ .=.|.++++++.+.+.+  ..+  ....+++.....+...|+.   +..
T Consensus       191 ~~~-~Pl----~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T---L~l  262 (397)
T d1y4ia1         191 YCQ-QPL----QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT---LGI  262 (397)
T ss_dssp             TTC-CGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT---HHH
T ss_pred             ccC-cch----hcCCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc---HHH
Confidence            221 112    2334599999999875333 33467778888776543  222  2346778877777777654   566


Q ss_pred             HHHHHHHHHHHHHHHHccCCCCe
Q 014492          335 VKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       335 ~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      +.++..++...+.+.|++.+.+.
T Consensus       263 Rm~~~~~nA~~lA~~L~~hp~V~  285 (397)
T d1y4ia1         263 RMERHCENALKIARFLEGHPSIT  285 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcC
Confidence            67777889999999999887654

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.81  E-value=2.1e-17  Score=156.71  Aligned_cols=216  Identities=16%  Similarity=0.164  Sum_probs=168.5

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~  201 (423)
                      +.+|....|++.+++..|-  +..+++++++.|+..++.+++++||+|++....|......++    .+|+++..++.  
T Consensus        56 ~~nPT~~~LE~~la~LEg~--~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~--  131 (392)
T d1gc0a_          56 ISNPTLNLLEARMASLEGG--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM--  131 (392)
T ss_dssp             -CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT--
T ss_pred             CCChHHHHHHHHHHHHhCC--cceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc--
Confidence            4566778999999999983  567788889999999999999999999999999986555543    46999988863  


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEcc
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT  280 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S  280 (423)
                         -|+++++++++ +++|+|++.+|.|||..+.+++.+.++++. |+++++|..|...... .+.    ..+-.+++.|
T Consensus       132 ---~d~~~~~~ai~-~~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~~~-~Pl----~~GaDivihS  202 (392)
T d1gc0a_         132 ---ADLQALEAAMT-PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQ-RPL----ELGADLVVHS  202 (392)
T ss_dssp             ---TCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-CGG----GGTCSEEEEE
T ss_pred             ---cCHHHHHHhCC-CCCeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCcccc-ChH----HhCCCEEEEe
Confidence               47899999997 799999999999999999999999999998 9999999999732211 111    2344599999


Q ss_pred             ChhhhcccC-ccccccccCHHHHHHHH--Hhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          281 FSKRAGLAG-LRVGYGAFPLSIIEYLW--RAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       281 ~SK~~g~~G-~R~G~i~~~~~~~~~l~--~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      .+|-++--| .-.|.++++++.+.+.+  ..+  ....+++.....+...++.   +..+.++..++...+.+.|++.+.
T Consensus       203 ~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T---L~lRm~~~~~nA~~lA~~L~~hp~  279 (392)
T d1gc0a_         203 ATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT---LNLRMDRHCANAQVLAEFLARQPQ  279 (392)
T ss_dssp             TTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             cceeecCCcccccccccchhHHHHHHHHHHHHHccCCcCChhhHHHHHhcccc---HHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999875333 44578888888876553  222  3456778777777776654   566777778899999999988765


Q ss_pred             Ce
Q 014492          356 LN  357 (423)
Q Consensus       356 ~~  357 (423)
                      +.
T Consensus       280 V~  281 (392)
T d1gc0a_         280 VE  281 (392)
T ss_dssp             EE
T ss_pred             cc
Confidence            43

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=7.8e-18  Score=159.41  Aligned_cols=216  Identities=15%  Similarity=0.152  Sum_probs=164.3

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH----CCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~v~~~  200 (423)
                      ++.+|....|++.++.+.|.  +..+++++++.|+..+ ..++++||+|++..+.|......++.    .|+++..+.  
T Consensus        45 R~~nPt~~~le~~la~LE~~--~~a~~fsSGMaAisal-l~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d--  119 (380)
T d1ibja_          45 RSGNPTRDALESLLAKLDKA--DRAFCFTSGMAALSAV-THLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN--  119 (380)
T ss_dssp             TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH-HTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEEC--
T ss_pred             CCCChHHHHHHHHHHHHcCC--ceEEehhhHHHHHHHH-HHhhCCCCEEEEEecccccccchhhhhhccccccccccC--
Confidence            34567778999999999984  5567777788899755 45899999999999999866555443    688888876  


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                         ..|++++++++. +++|+|++.+|.||+..+.+++.+.++++. |+++|+|..+...... .+.    .++-++++.
T Consensus       120 ---~~~~~~~~~ai~-~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~-~Pl----~~GaDiVvh  190 (380)
T d1ibja_         120 ---TTKLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS-RPL----ELGADIVMH  190 (380)
T ss_dssp             ---TTSHHHHHHHCC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC-CGG----GTTCSEEEE
T ss_pred             ---cchHHHHHHHhc-cCccEEEeccccccccccccHHHHHHHHHHcCCeEEeeccccccccc-ccc----ccCCCEEEe
Confidence               346899999996 799999999999999999999999999998 9999999999743321 112    334559999


Q ss_pred             cChhhhcccCcc-ccccccC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAGLR-VGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G~R-~G~i~~~-~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |++|.++--|-- .|.++.+ +++.+.+......  ..+++.....+...++.   +..+.++..++...+.+.|++.+.
T Consensus       191 S~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T---l~lRm~~~~~nA~~lA~~L~~hp~  267 (380)
T d1ibja_         191 SATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT---MALRIEKQQENARKIAMYLSSHPR  267 (380)
T ss_dssp             ETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred             cccceeccccCccccccccchhhHHHHHHhhccccCCcCCHHHHHHHHhcchh---hhhhHHHHHHHHHHHHHHHHhCCC
Confidence            999987644332 4565554 5566666555433  35777777777777655   566777778899999999998765


Q ss_pred             Ce
Q 014492          356 LN  357 (423)
Q Consensus       356 ~~  357 (423)
                      +.
T Consensus       268 V~  269 (380)
T d1ibja_         268 VK  269 (380)
T ss_dssp             CC
T ss_pred             ee
Confidence            54

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.80  E-value=7.2e-19  Score=170.23  Aligned_cols=315  Identities=12%  Similarity=0.031  Sum_probs=197.5

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCCC--------C--cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYP--------D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM  163 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y~--------~--~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~  163 (423)
                      +++++|+.+..... |..+.+++.+. ......+        .  ...+++|+.+++++|+++++|++|++++++++.++
T Consensus        26 ~~~iYLd~as~g~~-p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~llga~~~ei~~~~~~T~~~~~~~  104 (404)
T d1qz9a_          26 EGVIYLDGNSLGAR-PVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVL  104 (404)
T ss_dssp             TTCEECCTTTSCCC-BTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHH
T ss_pred             CCCEEcCCcccccC-CHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHhCCCCCcEEEecCchHHHHHHh
Confidence            45789988654332 34556665542 1111111        0  11357999999999999999999999999998876


Q ss_pred             HHh------cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          164 RCV------LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       164 ~~l------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      ...      ..+++.|++.+-.|..........+.++..++.+.....+++.++++++ +++++|.+++.+|.||.++|.
T Consensus       105 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~T~lV~i~~v~~~tG~~~pv  183 (404)
T d1qz9a_         105 SAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAID-QDTAVVMLTHVNYKTGYMHDM  183 (404)
T ss_dssp             HHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCS-TTEEEEEEESBCTTTCBBCCH
T ss_pred             hhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceeccccccchhHHHhcC-CCceEEEEecccccccceecH
Confidence            532      3678888877776654333333333333333322333557788889997 799999999999999999999


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhc-------
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK-------  309 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~-------  309 (423)
                      +++.++++. ++.+++|.++......-.    +...+..++..|.+|.++.+.--.|+++.++...+.+....       
T Consensus       184 ~~i~~~~~~~~~~~~vD~~q~~g~~~~~----~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~  259 (404)
T d1qz9a_         184 QALTALSHECGALAIWDLAHSAGAVPVD----LHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHS  259 (404)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTSCCC----HHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBC
T ss_pred             HHHhccccccccceeEEeeccccccccc----cccccceEEEEechhhcccCCceEEEEEechhhhhhCCccccccCCcc
Confidence            999999998 999999999985543211    22223347777888865433333567776665544332100       


Q ss_pred             ------------------CCCCCcHHHHHH---HHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CC----
Q 014492          310 ------------------QPYNVSVAAEVA---ACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PS----  361 (423)
Q Consensus       310 ------------------~~~~~~~~~~~a---~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~----  361 (423)
                                        ...+.+......   +...+..  .+.+++....+......+...+...+++.+. |.    
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~i~~p~~~~~  339 (404)
T d1qz9a_         260 RQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAK  339 (404)
T ss_dssp             TTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGG
T ss_pred             ccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHhhccCCCEEEECCCCccc
Confidence                              011233333332   2233333  2333444444444444455555555555542 22    


Q ss_pred             CceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492          362 YSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG----KPEHTDALMECLMHL  422 (423)
Q Consensus       362 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~l  422 (423)
                      .+.++.+.++   ++.++.+.|.++||.+....    +++||||++    +.+|++++.++|+++
T Consensus       340 r~~~vsf~~~---~~~~v~~~L~~~gi~~~~r~----~~~lRiS~~h~ynt~~did~~~~~L~~v  397 (404)
T d1qz9a_         340 RGSHVSFEHP---EGYAVIQALIDRGVIGDYRE----PRIMRFGFTPLYTTFTEVWDAVQILGEI  397 (404)
T ss_dssp             BCSEEEEECT---THHHHHHHHHTTTEECEEET----TTEEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             eeeEEEEecC---CHHHHHHHHHHCCCEEeecC----CCeEEEECCCCCCCHHHHHHHHHHHHHH
Confidence            2456777776   58889999999999765432    478999974    467777777777654

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.79  E-value=3.2e-17  Score=156.92  Aligned_cols=280  Identities=16%  Similarity=0.146  Sum_probs=193.5

Q ss_pred             cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCC
Q 014492          129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN  206 (423)
Q Consensus       129 ~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d  206 (423)
                      +...++++.+++++|.  ++.+++++++.|+.+++.++ +++||+|++++.+|......+...|++++.++.+ +.+.+|
T Consensus        31 ~~v~~~E~~la~~~g~--~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~~~~~~~ai~~~g~~pv~~d~~~~~~~~d  108 (376)
T d1mdoa_          31 PKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVT  108 (376)
T ss_dssp             HHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBC
T ss_pred             HHHHHHHHHHHHHHCc--CeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecccccccccchhccccceeeecccccccCCC
Confidence            3478999999999996  46777888899999999998 8999999999999999999999999999999965 467899


Q ss_pred             HHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccChhh
Q 014492          207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       207 ~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~SK~  284 (423)
                      ++++++++. +++++|+++   +..|...+.+++.++|+. |++||+|++++.+.. .+...   ...+..++-...+|.
T Consensus       109 ~~~l~~~i~-~~tkaIi~~---h~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~~~~~~~---g~~g~~~~Sf~~~K~  181 (376)
T d1mdoa_         109 PEHIEAAIT-PQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHI---GARGTAIFSFHAIKN  181 (376)
T ss_dssp             HHHHHHHCC-TTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEET---TSSSEEEEECCTTSS
T ss_pred             HHHHHHhcC-CCCeEEEEe---CCCCCccchhHHHHHHHhcCceEEeccchhccCeeCCeec---ccccCccccCCCcCC
Confidence            999999997 689999965   468999999999999998 999999999986542 11111   123323333334687


Q ss_pred             hcccCccccccccC-HHHHHHHHHhcCC--------------------------CCCcHHHHHHHHHHhCChHHHHHHHH
Q 014492          285 AGLAGLRVGYGAFP-LSIIEYLWRAKQP--------------------------YNVSVAAEVAACAALQNPIYLEKVKE  337 (423)
Q Consensus       285 ~g~~G~R~G~i~~~-~~~~~~l~~~~~~--------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~  337 (423)
                      ++. |- -|.++.+ +++.+++......                          +.++.+..+.+..-|.   .+++..+
T Consensus       182 l~~-g~-GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~---~~~~~~~  256 (376)
T d1mdoa_         182 ITC-AE-GGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ---KLDALNA  256 (376)
T ss_dssp             SCS-SS-CEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH---THHHHHH
T ss_pred             CCC-CC-CCEEEEechhHHHHHHhhcccCCcccccccccccccccccchhcccccccchhhhhhhhhhhh---hhhHHHH
Confidence            753 32 4766664 5566666544321                          1233343333333332   3455666


Q ss_pred             HHHHHHHHHHHHHccCCCCeecCCC-----ceEEEEE-eC---CCCCHHHHHHHHHhCCcEEEeCCCC------------
Q 014492          338 ALIKERERLFKLLKDVPFLNPYPSY-----SNFILCE-VT---SGMDAKKLKDDLAKMGVMIRHYNNK------------  396 (423)
Q Consensus       338 ~~~~~~~~l~~~L~~~~~~~~~p~~-----~~~~~~~-~~---~~~~~~~l~~~L~~~gI~v~~~~~~------------  396 (423)
                      +.+++++++.+.|+++++.......     ..+.++. ++   .+.+.+++.+.|.++||.++....+            
T Consensus       257 ~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~~y~~~~~~~~~~~~~~  336 (376)
T d1mdoa_         257 RRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFP  336 (376)
T ss_dssp             HHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHST
T ss_pred             HHhhhhhhhhhhcccccccccccccccccccccccccccccccchhhHHHHHHHHHHCCCCeeeECcchhcCHHHHhhCC
Confidence            6777888888999887765432211     1222222 22   1345678999999999988643210            


Q ss_pred             --C-------CCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          397 --E-------LKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       397 --~-------~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                        .       ....+.|-+.   +.++.+++.++|+++
T Consensus       337 ~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i  374 (376)
T d1mdoa_         337 TLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQI  374 (376)
T ss_dssp             TCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence              0       0234665332   457788888888765

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.78  E-value=2.8e-16  Score=149.18  Aligned_cols=236  Identities=15%  Similarity=0.162  Sum_probs=173.7

Q ss_pred             CCCCHHHHHHHhcCCCCCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhh
Q 014492          107 YGPPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY  183 (423)
Q Consensus       107 ~~~~~~v~~al~~~~~~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~  183 (423)
                      ++...+..+....-..++.|   .+|....|++.++++.|.  +..+++++++.|+..++.+++++||.|++....|...
T Consensus        42 ~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~LE~~la~LEgg--~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t  119 (398)
T d1qgna_          42 FNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGA--ESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKT  119 (398)
T ss_dssp             BSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHH
T ss_pred             eCCHHHHHHHhcCCcCCceecCCCChHHHHHHHHHHHHhCC--ceEEEecCcchHHHHHHhhcccccccccccccccchh
Confidence            33344444444333333445   566678899999999884  5678889999999999999999999999999999755


Q ss_pred             HHHH----HHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492          184 EFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (423)
Q Consensus       184 ~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~  258 (423)
                      ...+    +..|+++..++.     .|.++.++.+..+++++|++.+|.||+..+.+++.+.++++. |+++|+|..+..
T Consensus       120 ~~l~~~~~~~~gi~~~~~~~-----~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~at  194 (398)
T d1qgna_         120 RIFIETILPKMGITATVIDP-----ADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFAT  194 (398)
T ss_dssp             HHHHHHTGGGGTCEEEEECS-----SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC
T ss_pred             hhhhcccccccccccccccc-----cchhhhhhhhccccceEEEccCccccccccchHHHHHHHHhhcCCEEEecceeec
Confidence            5443    447888888862     345555555444799999999999999999999999999997 999999999873


Q ss_pred             ccCCCchhhhhccCCcEEEEccChhhhcccCc-cccccccCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHH
Q 014492          259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKV  335 (423)
Q Consensus       259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~  335 (423)
                      .... .+.    ..+-.|++.|++|.++--|- =.|.+..++++++.++.....  ..+++.....+...|+   .+..+
T Consensus       195 P~~~-~Pl----~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~---TL~lR  266 (398)
T d1qgna_         195 PLNQ-KAL----ALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK---TLHLR  266 (398)
T ss_dssp             TTTC-CTT----TTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG---GHHHH
T ss_pred             cccC-Cch----hhCCCEEEEechhhcCcccceeehhhcchhhhhhhhhhhcccCCCcCCHHHHHHHHhcch---HHHHH
Confidence            2221 111    23445999999998764432 246677788888877765543  3567777776666664   36677


Q ss_pred             HHHHHHHHHHHHHHHccCCCCe
Q 014492          336 KEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       336 ~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      .++..++...+.+.|++.+.+.
T Consensus       267 m~~~~~nA~~lA~~L~~hp~V~  288 (398)
T d1qgna_         267 VQQQNSTALRMAEILEAHPKVR  288 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCee
Confidence            7778889999999999877654

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=3.2e-16  Score=148.23  Aligned_cols=217  Identities=17%  Similarity=0.142  Sum_probs=164.4

Q ss_pred             CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCC
Q 014492          125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK  200 (423)
Q Consensus       125 ~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~  200 (423)
                      ++.+|....|++.+++..|-  +..+++++++.|+..++..++++||.|++....|....    ......|..+..+.  
T Consensus        46 R~~nPt~~~le~~la~LEgg--~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d--  121 (384)
T d1cs1a_          46 RRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD--  121 (384)
T ss_dssp             TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC--
T ss_pred             CCCCHHHHHHHHHHHHHhCC--CceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhccccccccccc--
Confidence            34667788999999999983  56788889999999999999999999999999996443    33344677777775  


Q ss_pred             CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEc
Q 014492          201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR  279 (423)
Q Consensus       201 ~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~  279 (423)
                         ..|.++++..+. +++++|++.+|.|||..+.+++.+.++++. |+++|+|..+...... .+.    ..+-.|++.
T Consensus       122 ---~~d~~~~~~~~~-~~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~-~Pl----~~GaDiVvh  192 (384)
T d1cs1a_         122 ---QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-NPL----ALGADLVLH  192 (384)
T ss_dssp             ---TTCHHHHHHHHH-TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CGG----GGTCSEEEE
T ss_pred             ---CCCHHHHHhhcc-ccccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCcccc-ccc----ccCCCEEEE
Confidence               347899999987 799999999999999999999999999997 9999999999632221 112    234459999


Q ss_pred             cChhhhcccCc-ccccccc-CHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          280 TFSKRAGLAGL-RVGYGAF-PLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       280 S~SK~~g~~G~-R~G~i~~-~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      |.+|.++--|- =.|.++. ++++.+.+.....  ...+++.....+..-|+.   +..+.++..++...+.+.|++.+.
T Consensus       193 S~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T---L~lRm~~~~~nA~~lA~~L~~hp~  269 (384)
T d1cs1a_         193 SCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---LVPRMELAQRNAQAIVKYLQTQPL  269 (384)
T ss_dssp             ETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             ccccccccCCCcccccccCCchhhhhhhhhhhhhhhhccccccHHHHhhccch---hHHHHHHHHHHHHHHHHhcccCCc
Confidence            99998763332 2455666 4555555554333  245677777766666654   566677778899999999998776


Q ss_pred             Ce
Q 014492          356 LN  357 (423)
Q Consensus       356 ~~  357 (423)
                      +.
T Consensus       270 V~  271 (384)
T d1cs1a_         270 VK  271 (384)
T ss_dssp             EE
T ss_pred             ee
Confidence            53

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.76  E-value=6e-17  Score=158.20  Aligned_cols=283  Identities=13%  Similarity=0.058  Sum_probs=190.3

Q ss_pred             HHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc--CCCCeEEEcCCCchhhHHHHHHCCCeEEEecC---CCCCCCCHHHH
Q 014492          136 AALAKDSGLESDHILVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELI  210 (423)
Q Consensus       136 ~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~---~~~~~~d~~~l  210 (423)
                      ..+++.+|.+....++..|+++++..++.+..  .+++.|+++.-.|..+...+...|.+++.++.   ++.+.+|+++|
T Consensus       120 ~~~~~~~g~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l  199 (434)
T d2z67a1         120 ESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDI  199 (434)
T ss_dssp             HHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHH
T ss_pred             HHHHHhcCCCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCHHHH
Confidence            44556667766666777788777777776553  36899999999999999999999999988873   44567999999


Q ss_pred             HHHhhc----CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccChhh
Q 014492          211 ADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       211 ~~~i~~----~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~SK~  284 (423)
                      ++.+.+    .++.+|++++|++++|.+.+.+++.++|+. |+++++|++|..+.. .+.........+..+++.|++|.
T Consensus       200 ~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~~D~~~~s~hK~  279 (434)
T d2z67a1         200 ENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKN  279 (434)
T ss_dssp             HHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHH
T ss_pred             HHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCCcceEEEcCccc
Confidence            999964    367788888999999999999999999998 999999999975431 11122222334455788899998


Q ss_pred             hcccCcccccccc-CHHHHHHHHHhcCCCCCcH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccC---CCCee
Q 014492          285 AGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSV--AAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDV---PFLNP  358 (423)
Q Consensus       285 ~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~  358 (423)
                      ++.+ ...|+++. ++..++++.+.....+...  ....++...+. .+.+++..++..++.+++.+.|+++   .+..+
T Consensus       280 l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~-~~g~~~~~~~~~~~a~~l~~~L~~l~~~~g~~l  357 (434)
T d2z67a1         280 LLTP-IGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-SKNYLELVKNQKNSKKLLDELLNDLSKKTGGKF  357 (434)
T ss_dssp             HCCC-SSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCB
T ss_pred             cccC-CCccccccCcHHHHHHHHhhcccccccchHHHHHHHHHHHH-HhcchhHHHHHHHHHHHHHHHHHHhhhhcCcee
Confidence            8743 33455544 5677777765543332222  22223323332 2345566666677777777777653   22333


Q ss_pred             cC-CCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeC-----------CCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          359 YP-SYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHY-----------NNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       359 ~p-~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~-----------~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      .. .....+.+.+  ..+..++...|.+.||.....           ......+++|++++   +.+|+|++.++|+++
T Consensus       358 l~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~T~edID~~i~~L~kI  434 (434)
T d2z67a1         358 LDVESPIASCISV--NSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKI  434 (434)
T ss_dssp             CCCCCSSEEEEEC--SSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             cCCCCCceeeeec--CCCHHHHHHHHHHcCCeeeehhhhccccCeeeecccCCCeEEEecCCCCCHHHHHHHHHHHhcC
Confidence            22 2223333333  467889999999999854311           11233578999975   567778888887764

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=5.4e-16  Score=147.36  Aligned_cols=235  Identities=11%  Similarity=0.076  Sum_probs=172.9

Q ss_pred             CCCCHHHHHHHhcCCC-CCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchh
Q 014492          107 YGPPPEVREALGQLKF-PYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM  182 (423)
Q Consensus       107 ~~~~~~v~~al~~~~~-~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~  182 (423)
                      |...++..++...... .+.|   .+|....|++.+++..|.  +..+++++++.|+..++.+++++||+|++....|..
T Consensus        32 f~~~~~~~~~~~~~~~~~~~Y~R~~nPt~~~le~~la~LEg~--~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~  109 (391)
T d1cl1a_          32 FDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEP  109 (391)
T ss_dssp             CSSHHHHHHHHHTTTTTCCCCTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHH
T ss_pred             eCCHHHHHHHhcCCccCceEeECCCChhHHHHHHHHHHHhCC--ccEEEeccccceeeehhhcccCCCCeEEEecccccc
Confidence            3444555555554222 1234   566778999999999884  578888999999999999999999999999999986


Q ss_pred             hHHHHH----HCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC---CCEEEEccC
Q 014492          183 YEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEA  255 (423)
Q Consensus       183 ~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~---~~~li~Dea  255 (423)
                      ....++    ..|+++..+..     .|.++++++++ +++++|++.+|.||+..+.+++.+.++++.   |+++|+|..
T Consensus       110 T~~l~~~~l~~~Gi~~~~~d~-----~d~~~~~~~i~-~~t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT  183 (391)
T d1cl1a_         110 SQDFCSKILSKLGVTTSWFDP-----LIGADIVKHLQ-PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT  183 (391)
T ss_dssp             HHHHHHHTGGGGTCEEEEECT-----TCGGGGGGTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred             hhhhhhhcccccccccccccC-----ccccccccccc-cccceeeecccCcccccccccHHHHHHHHhccCCcEEEEecc
Confidence            554443    47889888873     35678888887 789999999999999999999999999853   999999999


Q ss_pred             CccccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCChHHH
Q 014492          256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNPIYL  332 (423)
Q Consensus       256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~~~~~  332 (423)
                      +...... .+.    ..+.++++.|.+|.++--| .=.|.++.+++..+.+.....  ...+++.....+..-|+.   +
T Consensus       184 ~atP~~~-~Pl----~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T---L  255 (391)
T d1cl1a_         184 WAAGVLF-KAL----DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRT---L  255 (391)
T ss_dssp             TTTTTSS-CGG----GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHTT---H
T ss_pred             ccchhhh-ccc----ccccceEEeecchhccccccccccceeccccccccchhhhhcccccCCchhhhhhhccchh---H
Confidence            9743321 122    2344599999999876333 234677777777666655443  245677766666655544   5


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          333 EKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       333 ~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      ..+.++..++...+.+.|++.+.+.
T Consensus       256 ~lR~~~~~~nA~~vA~~L~~hp~V~  280 (391)
T d1cl1a_         256 GVRLRQHHESSLKVAEWLAEHPQVA  280 (391)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccc
Confidence            6667777889999999999877554

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.75  E-value=4.9e-17  Score=151.62  Aligned_cols=209  Identities=15%  Similarity=0.140  Sum_probs=157.9

Q ss_pred             HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhh----HHHHHHCCCeEEEecCCCCCCCCHH
Q 014492          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVE  208 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~d~~  208 (423)
                      .|++.+|++.|.  +..+++++++.|+..++..++++||+|++..+.|...    ....+.+|+++..++.     -|++
T Consensus         2 aLE~~la~Leg~--~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~-----~d~~   74 (331)
T d1pffa_           2 ALEGKIAKLEHA--EACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPG   74 (331)
T ss_dssp             HHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTT
T ss_pred             HHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc-----cchh
Confidence            588999999883  5678889999999998889999999999999999643    3345668999999874     3678


Q ss_pred             HHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc-C-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492          209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE-M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       209 ~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~-~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      .++++++ +++++|++.+|.||+..+.+.+.+.+++. . |+++|+|..+...... .+.    ..+-.+++.|.+|.++
T Consensus        75 ~~~~~i~-~~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~-~pl----~~GaDiVv~S~TKy~~  148 (331)
T d1pffa_          75 NIEKHLK-PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILT-NPL----DLGVDIVVHSATKYIN  148 (331)
T ss_dssp             HHHHTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHC-CGG----GGTCSEEEEETTTTTS
T ss_pred             hHhhhcc-cccceeeeecccccccccccchhhhhhhhcccCceEEeeccccccccc-ccc----ccCCCEEEecchhhcC
Confidence            8999997 79999999999999999999999988864 4 8999999998733211 111    2334599999999875


Q ss_pred             ccC-ccccccccCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          287 LAG-LRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       287 ~~G-~R~G~i~~~~~~~~~l~~~--~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      --| .-.|.++.+++........  ...  ..+++.....+...+   +.+..+.++..++...+.+.|++.+.+.
T Consensus       149 Gh~d~~~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl---~Tl~~Rm~~~~~nA~~lA~~L~~hp~V~  221 (331)
T d1pffa_         149 GHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGT---LTLDMRVKRAAENAQKVAEFLHEHKAVK  221 (331)
T ss_dssp             SSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred             CCCccccccccccccchhhhhhhhhhhccCCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhhhhCCcEE
Confidence            433 3356777787776655432  221  245666655555544   4567777888899999999999877653

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=8.1e-17  Score=151.61  Aligned_cols=314  Identities=14%  Similarity=0.134  Sum_probs=215.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHH----HHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRR----LRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~------~g-~~~----lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +-|.|-..||-.  +|.+++++...   .+..+||.      .. ..+    ..+...+.||.+..+|-..+|+. |...
T Consensus        27 ~~i~LiaSEN~~--S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a~~anVqp~SGs~-AN~a  103 (416)
T d1dfoa_          27 EHIELIASENYT--SPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQ-ANFA  103 (416)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHH-HHHH
T ss_pred             cCceEecCcccC--CHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCCCcceeecccCcc-HHHH
Confidence            348998888876  58999998762   23333432      21 122    23444567888766777766665 6667


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHHH-----HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN  236 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~  236 (423)
                      ++.++++|||+|+..++.+..+...     +.....+.+.++.+.+..+|.+++++.+.+.+||+|++..-.  ....++
T Consensus       104 v~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~a~~~kPklIi~G~S~--y~r~~d  181 (416)
T d1dfoa_         104 VYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSA--YSGVVD  181 (416)
T ss_dssp             HHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHHHHHHCCSEEEEECSS--CCSCCC
T ss_pred             HHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCCccCccHHHHHHHHHHhccceEEecccc--cccccC
Confidence            7778999999999988887543221     111234667777666678999999999988999999976444  348899


Q ss_pred             HHHHHHHHcC-CCEEEEccCCcccc-CC---CchhhhhccCCcEEEEccChhhhcccCccccccccC---HHHHHHHHHh
Q 014492          237 DEDLLKILEM-PILVVLDEAYTEFS-GL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP---LSIIEYLWRA  308 (423)
Q Consensus       237 ~~~l~~i~~~-~~~li~Deay~~~~-~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~---~~~~~~l~~~  308 (423)
                      .+++++||+. |.++++|.+|.... .+   +++...    . .++..|.+|+|  +|-|-|+++.+   +++.+++.+.
T Consensus       182 ~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~----a-Dvvt~tThKtl--rGPrggiI~~~~~~~~~~~~i~~a  254 (416)
T d1dfoa_         182 WAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPH----A-HVVTTTTHKTL--AGPRGGLILAKGGSEELYKKLNSA  254 (416)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTT----S-SEEEEESSSTT--CCCSCEEEEESSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCceEEcchhhhhcceeccccCCcccc----c-ceeeeehhhcc--cCCCceEEEeccchHhHHHHHHhh
Confidence            9999999997 99999999996422 11   222222    2 38888999986  68888999985   6777888777


Q ss_pred             cCCCC---CcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-CCCceEEEEEeC-CCCCHHHHHH
Q 014492          309 KQPYN---VSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-PSYSNFILCEVT-SGMDAKKLKD  381 (423)
Q Consensus       309 ~~~~~---~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p~~~~~~~~~~~-~~~~~~~l~~  381 (423)
                      ..++.   +.....++...++..  ....++..+++.++.+.|.+.|.+.++-.+. ......+++++. .+.+..++.+
T Consensus       255 vfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~G~~iv~ggTdnHlvlvdl~~~~~~G~~a~~  334 (416)
T d1dfoa_         255 VFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADA  334 (416)
T ss_dssp             HTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHH
T ss_pred             hCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCCceeEEEecccCCCHHHHHH
Confidence            66642   222222222233322  2345778888899999999999998754333 234456788885 3778888999


Q ss_pred             HHHhCCcEEEe----CCC--CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          382 DLAKMGVMIRH----YNN--KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       382 ~L~~~gI~v~~----~~~--~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      .|.+.||.+..    ++.  +..+..|||+..       .+++++++.+.|.+
T Consensus       335 ~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~  387 (416)
T d1dfoa_         335 ALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCD  387 (416)
T ss_dssp             HHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             HHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHH
Confidence            99999999973    332  334678999963       45667777665543

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.74  E-value=1.6e-16  Score=148.85  Aligned_cols=317  Identities=17%  Similarity=0.145  Sum_probs=217.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHH----HHHHHHHHhCCCCCcEEEeCCHHHHHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRR----LRAALAKDSGLESDHILVGCGADELIDL  161 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~------~g-~~~----lr~~ia~~~g~~~~~i~~t~G~~~al~~  161 (423)
                      +-|.|-.+||-.  +|.+++++...   .+..+||.      .. ..+    ..+...+.|+.+.-+|-..+|+. +...
T Consensus        24 ~~l~LiaSEN~~--S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a~~anVqp~SGs~-An~a  100 (405)
T d1kl1a_          24 AKIELIASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQ-ANMA  100 (405)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCCSEEECCCSSHHH-HHHH
T ss_pred             cCceEeccCCcC--CHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCcceeeccCchH-HHHH
Confidence            458998888876  58999998763   23233432      11 222    33444567898777777777776 5567


Q ss_pred             HHHHhcCCCCeEEEcCCCchhhHH-----HHHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCC
Q 014492          162 IMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII  235 (423)
Q Consensus       162 ~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~  235 (423)
                      ++.+|++|||+|+..++...++..     .......+.+.++.+ +++.+|.+++++.+.+.+||+|++-.-.+|  ..+
T Consensus       101 v~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--r~~  178 (405)
T d1kl1a_         101 VYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAAASAYP--RII  178 (405)
T ss_dssp             HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCC
T ss_pred             HHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchhcccccHHHHHHHHHhhCcceEEecccccc--ccc
Confidence            777899999999988876643221     111234677888865 567899999999998899999997654444  678


Q ss_pred             CHHHHHHHHcC-CCEEEEccCCcccc-CCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHHHHHHhcCCCC
Q 014492          236 NDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN  313 (423)
Q Consensus       236 ~~~~l~~i~~~-~~~li~Deay~~~~-~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~  313 (423)
                      +.+++++||+. |.+|+.|-+|.... .++.....+ .+. .++..|.+|++  +|-|-|.++.++++.+++.+...|+.
T Consensus       179 d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~-~~a-Dvvt~tThKtl--rGPrgg~I~~~~~~~~~i~~avfPg~  254 (405)
T d1kl1a_         179 DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PYA-HFVTTTTHKTL--RGPRGGMILCQEQFAKQIDKAIFPGI  254 (405)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTC-SEEEEESSSTT--CCCSCEEEEECHHHHHHHHHHHTTTT
T ss_pred             ChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChh-hhh-hheeccccccc--cCCCCceEEecchhHHHHHhhhCccc
Confidence            99999999998 99999999996422 111111111 222 36678899986  68899999999999999988877743


Q ss_pred             C---cHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-CCceEEEEEeC-CCCCHHHHHHHHHhC
Q 014492          314 V---SVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-SYSNFILCEVT-SGMDAKKLKDDLAKM  386 (423)
Q Consensus       314 ~---~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-~~~~~~~~~~~-~~~~~~~l~~~L~~~  386 (423)
                      .   .....++...++..  ....++..+++.++.+.|.+.|.+.++..+.. .....+++++. .+.+.....+.|.+.
T Consensus       255 qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~G~~vv~ggTd~H~vlvdl~~~~~~g~~ae~~Le~a  334 (405)
T d1kl1a_         255 QGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEV  334 (405)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHH
T ss_pred             ccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCceeecCCCccceeeccccccCCcHHHHHHHHHHc
Confidence            2   22222222233322  23457788889999999999999987544332 34456788884 367788877888899


Q ss_pred             CcEEE----eCCC--CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          387 GVMIR----HYNN--KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       387 gI~v~----~~~~--~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      ||.+.    |++.  +..+..|||+..       .++++.++.+.|.+
T Consensus       335 gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~  382 (405)
T d1kl1a_         335 GITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGL  382 (405)
T ss_dssp             TEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHH
Confidence            99997    3432  334578999863       46667777766654

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.73  E-value=6.1e-15  Score=140.12  Aligned_cols=235  Identities=14%  Similarity=0.141  Sum_probs=172.2

Q ss_pred             CCCCHHHHHHHhcCCCCCCC---CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhh
Q 014492          107 YGPPPEVREALGQLKFPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY  183 (423)
Q Consensus       107 ~~~~~~v~~al~~~~~~~~Y---~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~  183 (423)
                      +...++..+.......++.|   .+|....|++.+++..|.  +..++.++++.|+..++.+++.+||.|++....|...
T Consensus        34 ~~~~~~~~~~~~~~~~~~~YsR~~nPT~~~le~~la~LEg~--~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t  111 (394)
T d1e5ea_          34 FDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKT--EACVATSSGMGAIAATVLTILKAGDHLISDECLYGCT  111 (394)
T ss_dssp             CSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHH
T ss_pred             eCCHHHHHHhhcCCcCCceecCCCCHHHHHHHHHHHHHhCC--cceeeeccchHHHHHHHHhhcccccccccccceeehh
Confidence            33344554544433333444   566678899999999883  5677788888999998888999999999999999643


Q ss_pred             H----HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC--CCEEEEccCCc
Q 014492          184 E----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYT  257 (423)
Q Consensus       184 ~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~--~~~li~Deay~  257 (423)
                      .    ......|+++..++.     -|++++++.++ +++++|++..|.||+..+.+++.+.++++.  |+++|+|..+.
T Consensus       112 ~~~~~~~~~~~gi~~~~~d~-----~d~~~~~~~i~-~~t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvvDnT~a  185 (394)
T d1e5ea_         112 HALFEHALTKFGIQVDFINT-----AIPGEVKKHMK-PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFC  185 (394)
T ss_dssp             HHHHHTHHHHTTCEEEEECT-----TSTTHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTT
T ss_pred             hHhHHHHhhccceeeeccCC-----CCHHHHHHhhc-ccccEEEEeccCCcceeeehhhhhhhccccccCeEEEecCccc
Confidence            3    345568999999974     25678899997 789999999999999999999988876654  89999999987


Q ss_pred             cccCCCchhhhhccCCcEEEEccChhhhcccC-ccccccccCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHhCChHHH
Q 014492          258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQNPIYL  332 (423)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G-~R~G~i~~~~~~~~~l~~~--~~~--~~~~~~~~~a~~~~l~~~~~~  332 (423)
                      ..... .+.    ..+-.|++.|.+|.++--| .-.|.++++++.+...+..  +..  ..+++.....+..-|+.   +
T Consensus       186 tP~~~-~Pl----~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T---L  257 (394)
T d1e5ea_         186 SPMIT-NPV----DFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLST---L  257 (394)
T ss_dssp             CTTTC-CGG----GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT---H
T ss_pred             CcccC-Cch----hcCCCEEEechhhhcCCCcccccccccchhhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh---H
Confidence            43321 122    2334599999999875333 3356777888877765433  222  34677777766666654   5


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          333 EKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       333 ~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      ..+.++..++...+.+.|++.+.+.
T Consensus       258 ~lRm~r~~~nA~~lA~~L~~hp~V~  282 (394)
T d1e5ea_         258 NIRMKAESENAMKVAEYLKSHPAVE  282 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCcc
Confidence            6677778889999999999887653

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.73  E-value=8.6e-16  Score=150.21  Aligned_cols=318  Identities=13%  Similarity=0.091  Sum_probs=197.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEE
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV  174 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl  174 (423)
                      -+|||-+....-...+...+++.  .....| .++...+|++.+++++|.  +.++++++++.|+.+++++++++||.|+
T Consensus        43 v~iDl~sDs~t~am~~~~~aa~~--~GDd~Y~~dpt~~~lE~~~a~l~G~--e~al~~~SGt~An~~a~~~l~~~Gd~Vi  118 (456)
T d1c7ga_          43 IYIDLLTDSGTNAMSDKQWAGMM--IGDEAYAGSENFYHLEKTVKELFGF--KHIVPTHQGRGAENLLSQLAIKPGQYVA  118 (456)
T ss_dssp             CSEECSCSSSCCCEEHHHHHHTT--SCCCCSSSCHHHHHHHHHHHHHHCC--SEEEEESSHHHHHHHHHHHHCCTTEEEE
T ss_pred             eeeEcccCCCcccchHHHHHHHh--ccchhccCCchHHHHHHHHHHHhCC--CeEEECCCHHHHHHHHHHHhcCCCCeEe
Confidence            35787543221111334433332  122457 567788999999999996  4688899999999999999999999998


Q ss_pred             EcCCCchhhHHHHHHCCCeEEEecC----------CCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCc-CcCCCHHHH
Q 014492          175 DCPPTFTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVER---EKPKCIFLTSPNNPD-GSIINDEDL  240 (423)
Q Consensus       175 ~~~p~y~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt-G~~~~~~~l  240 (423)
                      .....+ .........|+..+.+..          ...+.+|++++++.+++   .++.++++.+++|+. |.+++.+++
T Consensus       119 ~~~~f~-~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l  197 (456)
T d1c7ga_         119 GNMYFT-TTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANM  197 (456)
T ss_dssp             ESSCCH-HHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHH
T ss_pred             cCcchH-HHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHH
Confidence            766543 344445668888877652          13457899999999964   235688888999986 578888877


Q ss_pred             HHHHc---C-CCEEEEccCCcccc----------CCCchhhh----hccCCcEEEEccChhhhcccCccccccccC-HHH
Q 014492          241 LKILE---M-PILVVLDEAYTEFS----------GLESRMEW----VKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSI  301 (423)
Q Consensus       241 ~~i~~---~-~~~li~Deay~~~~----------~~~~~~~~----~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~-~~~  301 (423)
                      ++|.+   . |+.+++|+++....          +.......    ...+.. ++..|++|.++.++  -|+++.+ +++
T Consensus       198 ~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad-~~s~s~~K~~~~~~--GG~i~~~~~~l  274 (456)
T d1c7ga_         198 RAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYAD-GCTMSGKKDCLVNI--GGFLCMNDEEM  274 (456)
T ss_dssp             HHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTCCSS--CEEEEESCHHH
T ss_pred             HHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccc-cEEEeccccccccc--eeEEEcCCHHH
Confidence            76554   4 99999999975211          11111111    112222 55568999887543  3677764 556


Q ss_pred             HHHHHHhc---CC----CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEEEEeC---
Q 014492          302 IEYLWRAK---QP----YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFILCEVT---  371 (423)
Q Consensus       302 ~~~l~~~~---~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~~~~~---  371 (423)
                      .++++...   ..    ...+.....++...+..... .+..++..++.++|.+.|++.+...+.|.+++.++++..   
T Consensus       275 ~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~-~~~l~~r~~~~~~L~e~L~~~g~~vv~p~g~~~v~vda~~~~  353 (456)
T d1c7ga_         275 FSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFC  353 (456)
T ss_dssp             HHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHC
T ss_pred             HHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhccCCcccCCCCcceeEechhhc
Confidence            66555332   11    23444444433333322100 122233345567888888888766666778887777532   


Q ss_pred             -----CCCCHHHHHHHHH-hCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492          372 -----SGMDAKKLKDDLA-KMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECLMHL  422 (423)
Q Consensus       372 -----~~~~~~~l~~~L~-~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al~~l  422 (423)
                           ......++...|. +.||...+.+.             ......+|+++.    +.+++|++.++|+.+
T Consensus       354 ~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v  427 (456)
T d1c7ga_         354 PHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKL  427 (456)
T ss_dssp             TTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHH
T ss_pred             cCCCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEecCcccCCHHHHHHHHHHHHHH
Confidence                 1123455555554 78987643211             122346999986    567788888888764

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.72  E-value=6.9e-16  Score=151.77  Aligned_cols=285  Identities=12%  Similarity=0.087  Sum_probs=179.4

Q ss_pred             hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHHH-CCCeEEEec--CCCCC----
Q 014492          131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVP--RKSDF----  203 (423)
Q Consensus       131 ~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~v~--~~~~~----  203 (423)
                      ..++++.+|+++|.+ +.+++++|++.++..++.++++|||+|+++.-+|......+.. .+..++..+  .+...    
T Consensus        68 i~eae~~~A~~~ga~-~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~~~~g~~~~  146 (462)
T d1c4ka2          68 AVAAEKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGG  146 (462)
T ss_dssp             HHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEE
T ss_pred             HHHHHHHHHHHhCCC-eEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeecccccccccCC
Confidence            578999999999963 4666778888888888888999999999999999877665543 454544433  22221    


Q ss_pred             ----CCCHHHHHHHhh--------cCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhh
Q 014492          204 ----SLNVELIADAVE--------REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWV  269 (423)
Q Consensus       204 ----~~d~~~l~~~i~--------~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~  269 (423)
                          .++.+.+++.+.        ..++..+++.+.+|-+|.+.+.++|.++|+. |++|++|++|..... .+......
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~~~~~  226 (462)
T d1c4ka2         147 IYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSS  226 (462)
T ss_dssp             ECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGC
T ss_pred             CChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhccccccCcCCcch
Confidence                233343333221        1455656666666789999999999999998 999999999975432 11111111


Q ss_pred             --------ccCCcEEEEccChhhhcccCcccccccc-C------------HHHHHHHHHhcCCCCCcHHHHHHHHHHhC-
Q 014492          270 --------KKHDNLIVLRTFSKRAGLAGLRVGYGAF-P------------LSIIEYLWRAKQPYNVSVAAEVAACAALQ-  327 (423)
Q Consensus       270 --------~~~~~~i~i~S~SK~~g~~G~R~G~i~~-~------------~~~~~~l~~~~~~~~~~~~~~~a~~~~l~-  327 (423)
                              ...+.++++.|++|.+|.++  .|.++. +            .+.........+..+++......+..+.. 
T Consensus       227 ~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~sp~~~~~asl~~a~~~  304 (462)
T d1c4ka2         227 PLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAM  304 (462)
T ss_dssp             TTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH
T ss_pred             hhccccccccCCccEEEEecCccccccc--ceEEEEeccccccccchhhhHHHHHHhhhhcccCCchHHHHHHHHHHHHH
Confidence                    01234789999999887543  344432 2            23333333344445555554433333322 


Q ss_pred             -ChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-----------------------------CC----------CceE--
Q 014492          328 -NPIYLEKVKEALIKERERLFKLLKDVPFLNPY-----------------------------PS----------YSNF--  365 (423)
Q Consensus       328 -~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-----------------------------p~----------~~~~--  365 (423)
                       .....++..++..++.+++++.+.++.+....                             |.          ...+  
T Consensus       305 ~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (462)
T d1c4ka2         305 QEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYV  384 (462)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEE
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccccccCccceec
Confidence             23334556666667777777777665432110                             00          0011  


Q ss_pred             ----EEEEeC-----------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          366 ----ILCEVT-----------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       366 ----~~~~~~-----------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                          +.+..+           .+..+..+.+.|.++||.+...+    .+.||++++   +.++.++|.++|++|
T Consensus       385 Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~~e~~~----~~~i~~~~s~~~T~edid~li~aL~ei  455 (462)
T d1c4ka2         385 DPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMNNLITQLLQL  455 (462)
T ss_dssp             CTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             ccceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCeeeccC----CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence                233322           14567889999999999765443    578999986   677889999998876

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1e-15  Score=149.31  Aligned_cols=332  Identities=13%  Similarity=0.062  Sum_probs=213.4

Q ss_pred             HHHHhCCCCCCeeEcCCCCCCCCCCHHHHHHHhc-CCCC----CCCCCcc--hHHHHHHHHHHhCCCCC-----cEEEeC
Q 014492           86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFP----YIYPDPE--SRRLRAALAKDSGLESD-----HILVGC  153 (423)
Q Consensus        86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~----~~Y~~~g--~~~lr~~ia~~~g~~~~-----~i~~t~  153 (423)
                      +..++-.++.+-++|.+..+.+ .+|++.+.+.+ ++.+    ..||...  ..++.+.+++++|.+..     .-.+|+
T Consensus        44 i~d~l~~dg~~~~n~asf~~t~-~~~~~~~l~~~~~~~N~~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~  122 (450)
T d1pmma_          44 INDELYLDGNARQNLATFCQTW-DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTI  122 (450)
T ss_dssp             HHHHGGGSCCGGGBCSCCSCCC-CCHHHHHHHHHTTTCBTTCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEES
T ss_pred             HHHHhccCCCccccccccccCC-CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeC
Confidence            3344433344445666554443 35777777765 2221    2344332  23567788888887431     257999


Q ss_pred             CHHHHHHHHHHHhc-----------CC-CCeEEEcCCCchhhHHHHHHCCCeEEEecCCC-CCCCCHHHHHHHhhcCCce
Q 014492          154 GADELIDLIMRCVL-----------DP-GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPK  220 (423)
Q Consensus       154 G~~~al~~~~~~l~-----------~~-gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~  220 (423)
                      |+++++.+.+.+..           .+ ...+++....|..+...++.+|++++.||.++ ++.+|+++++++++ +++.
T Consensus       123 GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~~~~~~d~~~L~~~i~-~~t~  201 (450)
T d1pmma_         123 GSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACD-ENTI  201 (450)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCC-TTEE
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecCCCCcCcHHHHHHHhh-hCce
Confidence            99999988776531           11 23577778889999999999999999999654 58999999999997 6888


Q ss_pred             EEEEcCCCCCcCcCCCHHHHHHHHcC-------CCEEEEccCCccccC--CCchh-hhhccCCcEEEEccChhhhcccCc
Q 014492          221 CIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSG--LESRM-EWVKKHDNLIVLRTFSKRAGLAGL  290 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~~~~l~~i~~~-------~~~li~Deay~~~~~--~~~~~-~~~~~~~~~i~i~S~SK~~g~~G~  290 (423)
                      +|+.+.++|.||.+-+.+++.+|++.       |+++++|.+|+.+..  ..... .......-..+..|.+|. +....
T Consensus       202 ~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s~HK~-~~~p~  280 (450)
T d1pmma_         202 GVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKF-GLAPL  280 (450)
T ss_dssp             EEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT-TCCCS
T ss_pred             EEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecChhhc-cCCCC
Confidence            99989999999999999999888652       899999999986531  11111 111123345678889994 44556


Q ss_pred             cccccccCHH-HHHHHHHhc---------C---CCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCC
Q 014492          291 RVGYGAFPLS-IIEYLWRAK---------Q---PYNVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPF  355 (423)
Q Consensus       291 R~G~i~~~~~-~~~~l~~~~---------~---~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~  355 (423)
                      .+||++.... .........         .   .++-+.....+....+..  .+.+++..++..++.+++.+.|++++.
T Consensus       281 g~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~  360 (450)
T d1pmma_         281 GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGP  360 (450)
T ss_dssp             SCEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             CeeEEEecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            6899888543 221111100         0   111122222223333332  345788888899999999999999887


Q ss_pred             Ceec-C----CCceEEEEEeCC----CCCHHHHHHHHHhCCcEEEeCCC---CCCCCeEEEEecC---hhhHHHHHHHHh
Q 014492          356 LNPY-P----SYSNFILCEVTS----GMDAKKLKDDLAKMGVMIRHYNN---KELKGYVRVSVGK---PEHTDALMECLM  420 (423)
Q Consensus       356 ~~~~-p----~~~~~~~~~~~~----~~~~~~l~~~L~~~gI~v~~~~~---~~~~~~iRis~~~---~~~~~~l~~al~  420 (423)
                      +.+. +    ...+.+.+++.+    +.+..++.+.|.++|..|..+..   ......+|+.+..   .+..++|.+.|+
T Consensus       361 ~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl~  440 (450)
T d1pmma_         361 YEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYK  440 (450)
T ss_dssp             EEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             eEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHHHHcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHHHH
Confidence            6542 1    223456677642    46778899999999987754332   1223579999864   333444444443

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.71  E-value=7.5e-15  Score=140.11  Aligned_cols=216  Identities=17%  Similarity=0.139  Sum_probs=157.6

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHH----HHHHCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~  201 (423)
                      +.+|....|+++|+++.|.  +..++++++..|+..++..++++||+|++....|.....    .+...|+++..++..+
T Consensus        55 ~~nPT~~~LE~~la~LE~~--~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~  132 (421)
T d2ctza1          55 IMNPTVDVLEKRLAALEGG--KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE  132 (421)
T ss_dssp             TBCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC
T ss_pred             CCCHHHHHHHHHHHHHhCC--CeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceeccccc
Confidence            3566678999999999984  567788888899999999999999999999999975443    3456899999886321


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCc--cccCCCchhhhhccCCcEEEE
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT--EFSGLESRMEWVKKHDNLIVL  278 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~--~~~~~~~~~~~~~~~~~~i~i  278 (423)
                          +.+..++.++ +++|+|++.+|.|||..+.+++.+.++++. |+++|+|..++  ++...  +.    ..+..|++
T Consensus       133 ----~~~~~~~~~~-~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~tP~~~~--Pl----~~GaDiVv  201 (421)
T d2ctza1         133 ----RPEEFLALTD-EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLR--PL----AWGAALVT  201 (421)
T ss_dssp             ----CHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCC--GG----GGTCSEEE
T ss_pred             ----CcchhccccC-CCceEEEEcCCCcceeEecchHHHHHHHHhcCCceEecccccccceecc--cc----ccCCcEEE
Confidence                3455666665 799999999999999999999999999998 99999999986  23222  22    23445999


Q ss_pred             ccChhhhcccCcc-ccccccCHH-------------------------------HHHHHHH-h--cCCCCCcHHHHHHHH
Q 014492          279 RTFSKRAGLAGLR-VGYGAFPLS-------------------------------IIEYLWR-A--KQPYNVSVAAEVAAC  323 (423)
Q Consensus       279 ~S~SK~~g~~G~R-~G~i~~~~~-------------------------------~~~~l~~-~--~~~~~~~~~~~~a~~  323 (423)
                      .|.+|.++--|-- .|.++.+++                               ++.+.+. .  .....+++.....+.
T Consensus       202 hS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sP~~a~l~~  281 (421)
T d2ctza1         202 HSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVL  281 (421)
T ss_dssp             EETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHH
T ss_pred             EechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCCHHHHHHHh
Confidence            9999987644433 355554321                               1111111 0  012456777766666


Q ss_pred             HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCe
Q 014492          324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLN  357 (423)
Q Consensus       324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  357 (423)
                      .-|+.   +..+.++..++...+.+.|++.+.+.
T Consensus       282 rgl~T---L~lRm~~~~~nA~~vA~~L~~hp~V~  312 (421)
T d2ctza1         282 LGMET---LSLRAERHVENTLHLAHWLLEQPQVA  312 (421)
T ss_dssp             HHHTT---HHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred             cCCcc---hhhHHHHHHHHHHHHHhhhccCCCee
Confidence            66644   56677777889999999999877653

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.70  E-value=6.3e-15  Score=141.19  Aligned_cols=252  Identities=19%  Similarity=0.160  Sum_probs=180.6

Q ss_pred             cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCC-CCCCCC
Q 014492          129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN  206 (423)
Q Consensus       129 ~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~d  206 (423)
                      +...++++.+|+++|.+  +++.+++++.|+.++++++ +++||+|++++.+|......+...|++++.++.+ .++.+|
T Consensus        34 ~~v~~fE~~~a~~~g~~--~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~t~~a~~~ai~~~g~~p~~~d~~~~~~~~d  111 (384)
T d1b9ha_          34 DEVNSFEREFAAHHGAA--HALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLD  111 (384)
T ss_dssp             SHHHHHHHHHHHHTTCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBC
T ss_pred             HHHHHHHHHHHHHHCcC--eEEEeCCHHHHHHHHHHHcCCCCCCEEEEeccccccccccccccccccccccccccccccc
Confidence            44789999999999964  6788888889999999987 7899999999999999999999999999999954 567899


Q ss_pred             HHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccChhh
Q 014492          207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFSKR  284 (423)
Q Consensus       207 ~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~SK~  284 (423)
                      ++.+++.+. .++++|+   +.+..|...+.+++.++|+. +++||+|.+++.++. .+.....  ..+-.++-.+.+|.
T Consensus       112 ~~~~~~~i~-~~tk~i~---~~~~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ga~~~g~~~g~--~g~~~~~Sf~~~K~  185 (384)
T d1b9ha_         112 PEAVAAAVT-PRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGE--LDSIATFSFQNGKL  185 (384)
T ss_dssp             HHHHHHHCC-TTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGG--SSSCEEEECCTTSS
T ss_pred             hhhhccccc-ccccccc---cccccccccccccchhhhhhhhhhhhhhhceecccccCCEecCc--ccccceeccccccc
Confidence            999999997 7899887   56778899999999999998 999999999987652 2222222  22333444455887


Q ss_pred             hcccCcccccccc-CHHHHHHHHHhcC-------------------CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 014492          285 AGLAGLRVGYGAF-PLSIIEYLWRAKQ-------------------PYNVSVAAEVAACAALQNPIYLEKVKEALIKERE  344 (423)
Q Consensus       285 ~g~~G~R~G~i~~-~~~~~~~l~~~~~-------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  344 (423)
                      ++ .| .-|.+++ ++++.++++....                   .+.++.+..+.+...|+.   +++..++-+++.+
T Consensus       186 i~-~g-~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aaig~~qL~~---ld~~~~~R~~~~~  260 (384)
T d1b9ha_         186 MT-AG-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLAR---LDEQIAVRDERWT  260 (384)
T ss_dssp             SC-SS-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTT---HHHHHHHHHHHHH
T ss_pred             cc-cc-ccchhhhhhHHHHHHHHHHHhcCCCCccccccccccccccccccccchhhhhhhhhhh---cccchhhhhhhhh
Confidence            65 33 2466666 4566665544321                   123566655555555543   4555555567788


Q ss_pred             HHHHHHccCCCCeecC--C----C-ceEEEEEeCCC--CCHHHHHHHHHhCCcEEEeC
Q 014492          345 RLFKLLKDVPFLNPYP--S----Y-SNFILCEVTSG--MDAKKLKDDLAKMGVMIRHY  393 (423)
Q Consensus       345 ~l~~~L~~~~~~~~~p--~----~-~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~  393 (423)
                      ++.+.|++++++...+  .    . ..+..+.++..  .+.++|.+.|.++||.++..
T Consensus       261 ~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~GI~~~~~  318 (384)
T d1b9ha_         261 LLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAA  318 (384)
T ss_dssp             HHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEEC
T ss_pred             hhhhhhhcccccccccccccccccccccccceecccccccHHHHHHHHHHCCCCeeee
Confidence            8888888877654321  1    1 12333445422  13457999999999988753

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=4.4e-15  Score=142.92  Aligned_cols=315  Identities=14%  Similarity=0.084  Sum_probs=202.5

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC---C-CCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP---Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~---~-~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      +.+++.+||+..+  ...++ .+|++.+|+.+ +...   . .+......++.+.+++..+.  +.++++++++++++.+
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~sGseA~e~A  114 (404)
T d2byla1          37 DVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNY--HKVLPMNTGVEAGETA  114 (404)
T ss_dssp             ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEecCCHHHHhhcCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcccc--cccccccCccccchhH
Confidence            4567889999776  34344 47889998876 3221   1 12223355677778887764  6899999999999999


Q ss_pred             HHHhc---------C-CCCeEEEcCCCchhhHHHHHHCC-------------CeEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492          163 MRCVL---------D-PGDKIVDCPPTFTMYEFDAAVNG-------------AAVVKVPRKSDFSLNVELIADAVEREKP  219 (423)
Q Consensus       163 ~~~l~---------~-~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (423)
                      ++...         . ....++...-.|+.....+....             ..+..+|     ..|++++++.+.++++
T Consensus       115 ik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p-----~~d~~~l~~~l~~~~i  189 (404)
T d2byla1         115 CKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIP-----YNDLPALERALQDPNV  189 (404)
T ss_dssp             HHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEEC-----TTCHHHHHHHHTSTTE
T ss_pred             HHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEec-----ccCHHHHHHhcCCCCe
Confidence            98542         1 12467766666653222221111             1233333     2478999999986778


Q ss_pred             eEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhhcccC-cc
Q 014492          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAG-LR  291 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~g~~G-~R  291 (423)
                      .+|++.......|...+    .++++++|+. |+++|+||++..|...+..  ....+..+.++   +++|.++ .| +.
T Consensus       190 AaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~---~~gK~l~-gG~~p  265 (404)
T d2byla1         190 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV---LLGKALS-GGLYP  265 (404)
T ss_dssp             EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGG-TTSSC
T ss_pred             EEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEE---EECchhh-CCCcc
Confidence            88888766766786665    4566677776 9999999999987543322  12222233333   5789998 55 89


Q ss_pred             ccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCC--CCeecCCCceEEE
Q 014492          292 VGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVP--FLNPYPSYSNFIL  367 (423)
Q Consensus       292 ~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~p~~~~~~~  367 (423)
                      +|.+++++++.+.+....  ..|+.++++.+++.+.|+.-+ -+...++.++..+++.+.|+++.  .+.-....|.+..
T Consensus       266 ~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~-~~~l~~~~~~~g~~l~~~l~~l~~~~i~~vRg~Gl~~~  344 (404)
T d2byla1         266 VSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLE-EENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNA  344 (404)
T ss_dssp             CEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSCTTTEEEEEEETTEEE
T ss_pred             ceeeeechhhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHH-hcCchhhhhHhhHHHHHHHHhhccccceeeeecccEEE
Confidence            999999999887664433  336778999998888886421 12344555566667777776643  2222234566666


Q ss_pred             EEeCC--CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHhh
Q 014492          368 CEVTS--GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLMH  421 (423)
Q Consensus       368 ~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~~  421 (423)
                      +.+.+  .....++.+.|.++||++.+..    .+.||++.....+.++++++++.
T Consensus       345 i~~~~~~~~~~~~~~~~l~~~Gvl~~~~~----~~~i~l~PpL~it~~~id~~~~~  396 (404)
T d2byla1         345 IVIKETKDWDAWKVCLRLRDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEI  396 (404)
T ss_dssp             EEECCCSSCCHHHHHHHHHHTTEECEEEE----TTEEEECCCTTCCHHHHHHHHHH
T ss_pred             EEEecCCchhHHHHHHHHHhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHH
Confidence            66643  4567789999999999998743    46899986522222445544443

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=9.5e-15  Score=142.75  Aligned_cols=287  Identities=13%  Similarity=0.008  Sum_probs=179.2

Q ss_pred             HHHHHHHHhCCCC-CcEEEeCCHHHH-HHHHHHHh---cCCCCeEEEcCCCchhhHHHHHHCCCeEEEec---CCCCCCC
Q 014492          134 LRAALAKDSGLES-DHILVGCGADEL-IDLIMRCV---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSL  205 (423)
Q Consensus       134 lr~~ia~~~g~~~-~~i~~t~G~~~a-l~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---~~~~~~~  205 (423)
                      +.+.+++.+|.+. ...++++|+++. +.+++.++   ..+++.|+++...|..+...++.+|++++.|+   .++++.+
T Consensus        99 ~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~~~~~~~i  178 (445)
T d3bc8a1          99 LVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRT  178 (445)
T ss_dssp             HHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEEC
T ss_pred             HHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeeccCccccc
Confidence            4455666678754 455666666644 43334433   34668999999999999999999999998886   3566789


Q ss_pred             CHHHHHHHhhc---CCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCC-Cchhhh-hccCCcEEEEc
Q 014492          206 NVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEW-VKKHDNLIVLR  279 (423)
Q Consensus       206 d~~~l~~~i~~---~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~-~~~~~~-~~~~~~~i~i~  279 (423)
                      |+++|++++.+   .++.+|++++|+|++|.+.+.+++.+||+. |+++++|++|+.+... ...... ....+-.++..
T Consensus       179 d~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~vd~~~~  258 (445)
T d3bc8a1         179 DLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQ  258 (445)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CHHHHHHHHHhccccCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhccCcCCcceEEe
Confidence            99999998863   357888889999999999999999999998 9999999999854321 111111 11233447788


Q ss_pred             cChhhhcccCcccccccc-CHHHHHHHHHhcCCCCCcH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc----
Q 014492          280 TFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSV--AAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD----  352 (423)
Q Consensus       280 S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----  352 (423)
                      |.+|.++.|. ..|+++. +....+.+......+....  ..+.+....+.. +......+...++.+++.+.|.+    
T Consensus       259 s~hK~~~~p~-g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~L~~l~~~  336 (445)
T d3bc8a1         259 SLDKNFMVPV-GGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGC-SGYRKLLKERKEMFVYLSTQLKKLAEA  336 (445)
T ss_dssp             EHHHHHSCCS-SCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccccccCC-CCceeeeCChHHHHHHHHHHhhcccCcchHHHHHHHHHHhh-hcchhhHHHHHHHHHHHHHHHHHHHhh
Confidence            8999876443 3455555 5677777665544443332  223332222221 22344444445555555555543    


Q ss_pred             CCCCee-cCCCceEEEEEeC-----CCCCHHHHHHHHHhCCcEEE-----------------eCCC---CCCCCeEEEEe
Q 014492          353 VPFLNP-YPSYSNFILCEVT-----SGMDAKKLKDDLAKMGVMIR-----------------HYNN---KELKGYVRVSV  406 (423)
Q Consensus       353 ~~~~~~-~p~~~~~~~~~~~-----~~~~~~~l~~~L~~~gI~v~-----------------~~~~---~~~~~~iRis~  406 (423)
                      .+.... .+......++.+.     ...+..++...|.+.||...                 .+..   .....++|+++
T Consensus       337 ~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~i~i~~  416 (445)
T d3bc8a1         337 HNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA  416 (445)
T ss_dssp             TTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEEC
T ss_pred             cCceeecCCCCCcceEEEeeeccccCCCCHHHHHHHHHHcCCCcceeeccccccchhhhhhhhcCCCCccCCCCeEEEeC
Confidence            232221 2344444444442     23456677888888887321                 1111   11235699987


Q ss_pred             c---ChhhHHHHHHHHhhh
Q 014492          407 G---KPEHTDALMECLMHL  422 (423)
Q Consensus       407 ~---~~~~~~~l~~al~~l  422 (423)
                      +   +.+|+|++.++|+++
T Consensus       417 ~~~~T~eDID~~v~~L~ki  435 (445)
T d3bc8a1         417 AIGMKMQDVDLFIKRLDKC  435 (445)
T ss_dssp             CTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHH
Confidence            6   566777777777653

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.68  E-value=5.8e-15  Score=140.09  Aligned_cols=210  Identities=13%  Similarity=0.107  Sum_probs=153.8

Q ss_pred             CCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCeEEEcCCCchhhHHHHH----HCCCeEEEecCCC
Q 014492          126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKS  201 (423)
Q Consensus       126 Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~~~  201 (423)
                      +.+|....|+++++++.|.  +..+++++++.|+..++ .++.+||.|++....|......++    ..|+++..++   
T Consensus        52 ~gnPT~~~lE~~la~LE~~--~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~---  125 (393)
T d1n8pa_          52 SQNPNRENLERAVAALENA--QYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN---  125 (393)
T ss_dssp             TCCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES---
T ss_pred             CCChHHHHHHHHHHHHhCC--ceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee---
Confidence            4566678999999999873  45566677788887666 477889999999999976554443    3677776664   


Q ss_pred             CCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHc----C-CCEEEEccCCccccCCCchhhhhccCCcEE
Q 014492          202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE----M-PILVVLDEAYTEFSGLESRMEWVKKHDNLI  276 (423)
Q Consensus       202 ~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~----~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i  276 (423)
                         .+.+++++.++ +++++|++.+|.||+..+.+++.+.++++    . |+++|+|..+...... .+.    .++-.|
T Consensus       126 ---~~~~~~~~~i~-~~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~~-~Pl----~~GADi  196 (393)
T d1n8pa_         126 ---DLLNDLPQLIK-ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL----NFGADI  196 (393)
T ss_dssp             ---SHHHHHHHHSC-SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG----GGTCSE
T ss_pred             ---cchHHHHHHhh-hhcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCcccC-Cch----hhCCCE
Confidence               24578899887 79999999999999999999999999987    3 8999999998732211 111    234459


Q ss_pred             EEccChhhhcccC-cccccccc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Q 014492          277 VLRTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD  352 (423)
Q Consensus       277 ~i~S~SK~~g~~G-~R~G~i~~-~~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~  352 (423)
                      ++.|++|.++--| +-.|.++. ++++.++++.....  ..+++.....+..-++.   +..+.++..++...+.+.|+.
T Consensus       197 VvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T---l~lR~~~~~~nA~~lA~~L~~  273 (393)
T d1n8pa_         197 VVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT---LHLRVRQAALSANKIAEFLAA  273 (393)
T ss_dssp             EEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTS
T ss_pred             EEEccccccCCCCccccceeeecchhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc---hhhHHHHHHHHHHHHHHHHHh
Confidence            9999999875333 44566654 56677777655443  35677776666666654   566677778888899999965


Q ss_pred             C
Q 014492          353 V  353 (423)
Q Consensus       353 ~  353 (423)
                      .
T Consensus       274 ~  274 (393)
T d1n8pa_         274 D  274 (393)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.67  E-value=3.8e-15  Score=141.79  Aligned_cols=314  Identities=14%  Similarity=0.133  Sum_probs=201.7

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCCc----c---hHH----HHHHHHHHhCCCCC----cEEEeCCHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPDP----E---SRR----LRAALAKDSGLESD----HILVGCGADE  157 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~~----g---~~~----lr~~ia~~~g~~~~----~i~~t~G~~~  157 (423)
                      +-|.|-.++|-.  ++.+++++...   .+..+||..    |   ..+    .++...+.|+++..    +|-.-+|+. 
T Consensus        28 ~~l~LiaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp~SGs~-  104 (463)
T d2a7va1          28 RGLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSP-  104 (463)
T ss_dssp             HSEECCTTCCCC--CHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH-
T ss_pred             cCeeEeccCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCccccccHH-
Confidence            348998888866  58999999763   233344421    1   122    34556678898876    566666665 


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHHH--------HHCCC--eEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDA--------AVNGA--AVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS  226 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~--------~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (423)
                      |...++.+|++|||+|+..++....+...-        ...|.  +.+.+..+ .++.+|.+++++.+.+.+||+|++-.
T Consensus       105 An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~~~~IDyd~~~~~a~~~kPklIi~G~  184 (463)
T d2a7va1         105 ANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT  184 (463)
T ss_dssp             HHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECC
T ss_pred             HHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCCCCcCcHHHHHHHHhhcCCceEEecc
Confidence            666777789999999998777665433111        11222  33444444 45679999999999888999999865


Q ss_pred             CCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccc-cCC---CchhhhhccCCcEEEEccChhhhcccCccccccccCH--
Q 014492          227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--  299 (423)
Q Consensus       227 p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~-~~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~--  299 (423)
                      -.+|  ..++.+++++||+. |.+|+.|-+|... ..+   ++++.    +. .++..|.+|+|  +|-|-|.|+.++  
T Consensus       185 S~y~--r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~----~a-Dvvt~tTHKTl--rGPrgGiIl~~~~~  255 (463)
T d2a7va1         185 SAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK----HA-DIVTTTTHKTL--RGARSGLIFYRKGV  255 (463)
T ss_dssp             SSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG----TC-SEEEEESSGGG--CSCSCEEEEEECSE
T ss_pred             cccc--cccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhh----hh-hhhhchhhhhh--cCCCceEEEEcccc
Confidence            4544  67899999999997 9999999999642 211   23332    22 37778899986  788999999865  


Q ss_pred             -------------HHHHHHHHhcCCC---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeecC-
Q 014492          300 -------------SIIEYLWRAKQPY---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPYP-  360 (423)
Q Consensus       300 -------------~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p-  360 (423)
                                   ++.+++.+...|.   ++..-..++...++..  ....++..+++.++.+.|.+.|.+.++..+.. 
T Consensus       256 ~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~vv~gg  335 (463)
T d2a7va1         256 KAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGG  335 (463)
T ss_dssp             EEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred             cccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Confidence                         5667777766553   2222222222233322  23357788888999999999999887544432 


Q ss_pred             CCceEEEEEeC-CCCCHHHHHHHHHhCCcEEEe----CCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          361 SYSNFILCEVT-SGMDAKKLKDDLAKMGVMIRH----YNN-KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       361 ~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~----~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      .....+++++. .+.+.....+.|.+.||.+..    ++. +..++.|||...       .++++.++.+.|.+
T Consensus       336 TdnHlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~  409 (463)
T d2a7va1         336 TDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE  409 (463)
T ss_dssp             CSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CCCceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHH
Confidence            33456778884 367888999999999999973    332 234568999863       45667777766643

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.66  E-value=2.8e-14  Score=137.41  Aligned_cols=315  Identities=15%  Similarity=0.114  Sum_probs=201.1

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC-CCCCCC--c-chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PYIYPD--P-ESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~~Y~~--~-g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ...++.+||+..+  ...+| .+|++.+|+.+ +.. .+.++.  . ....+.+.+++..+.  +.+.++++++++...+
T Consensus        35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~sgs~a~~~a  112 (404)
T d1z7da1          35 DVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGY--DKVLMMNTGAEANETA  112 (404)
T ss_dssp             ETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEccccHHHHhhhcCcHHHHHHHHHHHHhCCCcccccchHHHHHHHHhhhhcccc--ceeeeeccccchHHHH
Confidence            3467789998766  44555 47999999876 322 111111  1 234555666666663  6788999999999988


Q ss_pred             HHHhc----------CCCCeEEEcCCCchhhHHHHHHC-CC------------eEEEecCCCCCCCCHHHHHHHhhcCCc
Q 014492          163 MRCVL----------DPGDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDFSLNVELIADAVEREKP  219 (423)
Q Consensus       163 ~~~l~----------~~gd~Vl~~~p~y~~~~~~~~~~-g~------------~~~~v~~~~~~~~d~~~l~~~i~~~~~  219 (423)
                      ++...          .....++.....|+......... +.            .+..+|     .-+.+.++..+...++
T Consensus       113 ~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~i  187 (404)
T d1z7da1         113 YKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVP-----YDDLEALEEELKDPNV  187 (404)
T ss_dssp             HHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEEC-----TTCHHHHHHHHTSTTE
T ss_pred             HHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccc-----cchHHHHHHHhcCCCE
Confidence            87432          11235777777775433322211 11            111122     2357888888876778


Q ss_pred             eEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCccc
Q 014492          220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRV  292 (423)
Q Consensus       220 ~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~  292 (423)
                      .+|++...+...|.+.+    .++++++|+. |+++|+||++..|...+.  .....+..+.++   +++|.++..+..+
T Consensus       188 Aavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDiv---t~gK~l~gG~~p~  264 (404)
T d1z7da1         188 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI---LLGKALSGGHYPI  264 (404)
T ss_dssp             EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE---EECGGGGTTSSCC
T ss_pred             EEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEE---EEcccccCCCCCc
Confidence            88888877777888877    6778888887 999999999987753222  122233334444   5789998433889


Q ss_pred             cccccCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceEEE
Q 014492          293 GYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNFIL  367 (423)
Q Consensus       293 G~i~~~~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~~~  367 (423)
                      |.+++++++.+.+.....  .|+.++++..|+.+.|+.   ++..+...+.-....+.+.+.+++.+.+.-....|.+..
T Consensus       265 ~~v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg~Gl~~~  344 (404)
T d1z7da1         265 SAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCA  344 (404)
T ss_dssp             EEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEE
T ss_pred             ccccchHHHHccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEEeeCcEEE
Confidence            999999998876654432  367789999988888763   344555555556666777777777775543445667777


Q ss_pred             EEeCC-CCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492          368 CEVTS-GMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  419 (423)
Q Consensus       368 ~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  419 (423)
                      +.+.+ ..+..++...|.++||++.+..    ++.|||..+   ++++.+++.++|
T Consensus       345 i~~~~~~~~~~~~~~~l~~~Gl~~~~~~----~~~ir~~Ppl~it~~~id~~~~~l  396 (404)
T d1z7da1         345 IEFKNELVNVLDICLKLKENGLITRDVH----DKTIRLTPPLCITKEQLDECTEII  396 (404)
T ss_dssp             EEECTTTCCHHHHHHHHHHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             EEEcCCcccHHHHHHHHHhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHH
Confidence            78764 3456778899999999987754    478999864   344444443333

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.65  E-value=2.9e-15  Score=147.38  Aligned_cols=320  Identities=13%  Similarity=0.103  Sum_probs=191.7

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCC--
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD--  171 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd--  171 (423)
                      ..+|||-+....-...+...+++..-+  ..| ++++..+|++++++++|.  +++++++++++|+..+++.++++|+  
T Consensus        42 ~~~id~~sd~~t~~~~~~~~a~~~~gd--~~y~~~~~~~~le~~~a~l~g~--~~~~~~~sGt~A~~~a~~~~~~~g~~~  117 (465)
T d1ax4a_          42 AVYIDLLTDSGTNAMSDHQWAAMITGD--EAYAGSRNYYDLKDKAKELFNY--DYIIPAHQGRGAENILFPVLLKYKQKE  117 (465)
T ss_dssp             GCSEECSCSSSCCCEEHHHHHHHHTCC--CCSSSCHHHHHHHHHHHHHHCC--CEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred             CeeeecccccchhhhhHHHHHHHhhhh--hhhccChHHHHHHHHHHHHHCC--CEEEECCCcHHHHHHHHHHHHHHHHhc
Confidence            345787543222222344444443221  346 566788999999999996  6899999999999999998876543  


Q ss_pred             -----eEEEcCCCchhhHHHHHHCCCeEEEecC----------CCCCCCCHHHHHHHhhc---CCceEEEEcCCCCCcC-
Q 014492          172 -----KIVDCPPTFTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVER---EKPKCIFLTSPNNPDG-  232 (423)
Q Consensus       172 -----~Vl~~~p~y~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPtG-  232 (423)
                           .++.....|..+.......|..++.++.          +..+.+|++++++++++   ..+.+++++.++|..| 
T Consensus       118 ~~~~~~~i~~~~h~~t~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~  197 (465)
T d1ax4a_         118 GKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGG  197 (465)
T ss_dssp             TCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTS
T ss_pred             CCCCCeEEeccchhhhhHHHHHHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCce
Confidence                 3455555556666677778999887642          23567899999999864   2345566666676654 


Q ss_pred             cCCCHHHHHHHHc---C-CCEEEEccCCcccc-----------CCCchhh---hhccCCcEEEEccChhhhcccCccccc
Q 014492          233 SIINDEDLLKILE---M-PILVVLDEAYTEFS-----------GLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       233 ~~~~~~~l~~i~~---~-~~~li~Deay~~~~-----------~~~~~~~---~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      .+++.+.+++|++   . |+++|+|++|....           ++.+...   .+... ..++..|.+|..  .|.+.|+
T Consensus       198 ~~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~k~~--~~~~~g~  274 (465)
T d1ax4a_         198 QPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKY-ADALTMSAKKDP--LLNIGGL  274 (465)
T ss_dssp             BCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGG-CSEEEEETTSTT--CCSSCEE
T ss_pred             ecCCHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhccccccc-cceeEeecccCc--cccccee
Confidence            5678887776554   4 99999999986321           1111111   11111 124555666654  5666788


Q ss_pred             cccCHH--HHHHHHHh----cCC---CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE
Q 014492          295 GAFPLS--IIEYLWRA----KQP---YNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF  365 (423)
Q Consensus       295 i~~~~~--~~~~l~~~----~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~  365 (423)
                      ++.+++  ........    ...   .........++...+.. ...+...++..++.+++.+.|++++...+.+.++++
T Consensus       275 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~e-~~~~~~~~~~~~~~~~l~~~L~~~g~~~v~~~~~~~  353 (465)
T d1ax4a_         275 VAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEE-GTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHA  353 (465)
T ss_dssp             EEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSE
T ss_pred             EeecchHHHHHhhhccccccccCCCcchhhHHHHHHHhhhhHH-hhhHHHHHHHHHHHHHHHHHHHhhcCccccCCCcce
Confidence            887643  22222111    111   23344443333333321 111233444455678888999888765566777777


Q ss_pred             EEEEeCC--------CCCHHHHHHH-HHhCCcEEEeCCC-------------CCCCCeEEEEec----ChhhHHHHHHHH
Q 014492          366 ILCEVTS--------GMDAKKLKDD-LAKMGVMIRHYNN-------------KELKGYVRVSVG----KPEHTDALMECL  419 (423)
Q Consensus       366 ~~~~~~~--------~~~~~~l~~~-L~~~gI~v~~~~~-------------~~~~~~iRis~~----~~~~~~~l~~al  419 (423)
                      +++....        ......+... +.+.||.......             +...+.+|+++.    +.+++|++.++|
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l  433 (465)
T d1ax4a_         354 VFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADAL  433 (465)
T ss_dssp             EEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHH
T ss_pred             eeeehhhhcCCCccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHH
Confidence            7766531        1123444444 4588987653211             233568999864    567788888888


Q ss_pred             hhh
Q 014492          420 MHL  422 (423)
Q Consensus       420 ~~l  422 (423)
                      +++
T Consensus       434 ~~v  436 (465)
T d1ax4a_         434 IGL  436 (465)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            764

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.64  E-value=2.2e-14  Score=137.22  Aligned_cols=314  Identities=15%  Similarity=0.152  Sum_probs=200.1

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCC----CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+++.+||+..+  .+.+| .+|++.+|+.+ +...    ..++.+...++.+.+.+...-..+.+.++++++++++.+
T Consensus        33 d~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A  112 (387)
T d1vefa1          33 DAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAA  112 (387)
T ss_dssp             ETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHH
T ss_pred             ECCCCEEEEcchhHHhhhhcCCcHHHHHHHHHHHHhhcccccccCCchHHHHHHHhhhhccccceeeccccCchHHHHHH
Confidence            3567889998664  45565 46999988876 2211    122332233444555544443345799999999999999


Q ss_pred             HHHhc--CCCCeEEEcCCCchhhHHHHHH-CC------------CeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCC
Q 014492          163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP  227 (423)
Q Consensus       163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g------------~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p  227 (423)
                      ++...  .....|+....+|+.....+.. .|            ..+..+|.     .|++.+++.+. +++.+|++...
T Consensus       113 ik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-----~d~~~l~~~~~-~~iAavi~EPi  186 (387)
T d1vefa1         113 LKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVD-EETAAVILEPV  186 (387)
T ss_dssp             HHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCC-TTEEEEEECSE
T ss_pred             HHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-----CCHHHHHHhcC-CCeEEEEEECC
Confidence            88531  2336788888888643333222 22            12344442     37899999996 68888888755


Q ss_pred             CCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhcccCccccccccCHH
Q 014492          228 NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS  300 (423)
Q Consensus       228 ~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~  300 (423)
                      +...|...+    .++++++|+. |+++|.||++..|...+.  .....+..+.+++   ++|.++ .|+.++.++..++
T Consensus       187 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~~---~gK~l~-gG~~~~~~~~~~~  262 (387)
T d1vefa1         187 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILT---LAKALG-GGVPLGVAVMREE  262 (387)
T ss_dssp             ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE---ECGGGG-TTSSCEEEEEEHH
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCceee---ecccCC-CCcccccccccee
Confidence            666787655    5556667776 999999999998853322  2223333444443   579987 7888888888888


Q ss_pred             HHHHHHHhc--CCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCC--CeecCCCceEEEEEeCCCCCH
Q 014492          301 IIEYLWRAK--QPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPF--LNPYPSYSNFILCEVTSGMDA  376 (423)
Q Consensus       301 ~~~~l~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~p~~~~~~~~~~~~~~~~  376 (423)
                      ..+.+....  ..|+.++++..++.+.|+.-+ -....+++++.-+++.+.|+++..  +.-....|.+..+++.+ ...
T Consensus       263 ~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~-~~~~~~~v~~~g~~l~~~L~~l~~~~v~~vrg~Gl~~~ie~~~-~~~  340 (387)
T d1vefa1         263 VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE-RTRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE-KAA  340 (387)
T ss_dssp             HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH-HHTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS-CSH
T ss_pred             eeeccccCCccccCCCCcchhhhcccchhhcc-cccccchHhhhhHHHHHHHHhcCCCceEEEeecceEEEEEEeC-Cch
Confidence            776554332  336778999998888885421 123455666677777788876532  22223456677788863 345


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      ..+.+.+.++|+++.+.+    .+.+|++.+   +.++.+++.++++
T Consensus       341 ~~~~~~~~~~g~l~~~~g----~~~ir~~Ppl~it~~~ld~~~~~i~  383 (387)
T d1vefa1         341 PYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVR  383 (387)
T ss_dssp             HHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCeEEecC----CCEEEEECCccCCHHHHHHHHHHHH
Confidence            666777778898877654    468999865   3444444444444

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.64  E-value=5.3e-14  Score=134.21  Aligned_cols=314  Identities=16%  Similarity=0.115  Sum_probs=209.9

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcC---CCCCCCCC------cc-hHHHH----HHHHHHhCCCCC----cEEEeCCHHH
Q 014492           96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYPD------PE-SRRLR----AALAKDSGLESD----HILVGCGADE  157 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y~~------~g-~~~lr----~~ia~~~g~~~~----~i~~t~G~~~  157 (423)
                      +-|.|-..||-.  ++.+++++...   .+..+||.      .. ..+++    +...+.|+.+++    +|-.-+|+ .
T Consensus        32 ~~l~LIaSEN~~--S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~SGs-~  108 (470)
T d1rv3a_          32 VGLELIASENFA--SRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-P  108 (470)
T ss_dssp             SSEECCTTCCCC--CHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-H
T ss_pred             cCceEecCCCcC--CHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhccccccccCCc-c
Confidence            348998888866  58899999863   22223332      21 23333    444667888653    44444554 5


Q ss_pred             HHHHHHHHhcCCCCeEEEcCCCchhhHHH----------HHHCCCeEEEecCC-CCCCCCHHHHHHHhhcCCceEEEEcC
Q 014492          158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFD----------AAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTS  226 (423)
Q Consensus       158 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----------~~~~g~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~i~l~~  226 (423)
                      |...++.+|++|||+|+..+....++...          +.....+.+.++.+ +++.+|.+++++.....+||+|++-.
T Consensus       109 An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~~~IDyd~l~~~a~~~kPklIi~G~  188 (470)
T d1rv3a_         109 ANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGT  188 (470)
T ss_dssp             HHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEECC
T ss_pred             HHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecccCcccHHHHHHHHHhhCcceEeech
Confidence            77777888999999999877655432211          01112467777765 44789999999999888999999865


Q ss_pred             CCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcccc-CC---CchhhhhccCCcEEEEccChhhhcccCccccccccCH--
Q 014492          227 PNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GL---ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--  299 (423)
Q Consensus       227 p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~-~~---~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~--  299 (423)
                      -.+|  ..++.+++++||+. |.+|+.|-+|.... .+   ++++.    +. .++..|.+|+|  +|-|-|.|+.++  
T Consensus       189 S~y~--r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~----~a-Dvvt~tTHKtl--rGPrgGiI~~~~~~  259 (470)
T d1rv3a_         189 SCYS--RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE----HC-HVVTTTTHKTL--RGCRAGMIFYRRGV  259 (470)
T ss_dssp             SSCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG----TC-SEEEEESSGGG--CCCSCEEEEEECSB
T ss_pred             hhcc--ccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChhh----ee-eeeeeehhhhc--cCCcceEEEEcccc
Confidence            4544  67899999999997 99999999996422 11   23332    22 38888999986  688889998754  


Q ss_pred             -------------HHHHHHHHhcCCC---CCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C
Q 014492          300 -------------SIIEYLWRAKQPY---NVSVAAEVAACAALQN--PIYLEKVKEALIKERERLFKLLKDVPFLNPY-P  360 (423)
Q Consensus       300 -------------~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p  360 (423)
                                   ++.+++.+...|.   ++..-..++...++..  .....+..+++..+.+.|.+.|.+.++-.+. .
T Consensus       260 ~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~La~~L~~~G~~v~~gg  339 (470)
T d1rv3a_         260 RSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGG  339 (470)
T ss_dssp             CC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGS
T ss_pred             ccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCceeccCC
Confidence                         3677777776553   2222222222223322  2235778888999999999999988754333 2


Q ss_pred             CCceEEEEEeC-CCCCHHHHHHHHHhCCcEEE----eCCC-CCCCCeEEEEec-------ChhhHHHHHHHHhh
Q 014492          361 SYSNFILCEVT-SGMDAKKLKDDLAKMGVMIR----HYNN-KELKGYVRVSVG-------KPEHTDALMECLMH  421 (423)
Q Consensus       361 ~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~----~~~~-~~~~~~iRis~~-------~~~~~~~l~~al~~  421 (423)
                      .....+++++. .+.+..++.+.|.+.||.+.    |++. +..+..|||+..       .+++++++.+.|.+
T Consensus       340 TdnHlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm~~iA~~I~~  413 (470)
T d1rv3a_         340 SDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHR  413 (470)
T ss_dssp             CSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CCCceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHHHHHHHHHHHH
Confidence            33456777874 37788888888999999996    3332 333578999863       46667777666654

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.62  E-value=3.6e-14  Score=137.60  Aligned_cols=315  Identities=17%  Similarity=0.111  Sum_probs=190.6

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCCCCC-C-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYI-Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR  164 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~-Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~  164 (423)
                      +..++.+||+..+  .+.+| .+|+|.+|+.+ ++.... . +..-...+.+.+.+..+ ..+.+++++++++|++.+++
T Consensus        48 D~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~~~v~f~~sGseA~e~Alk  126 (427)
T d2gsaa_          48 DVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLR  126 (427)
T ss_dssp             ETTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTCSCCSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHH
T ss_pred             ECCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhcCccccchhHHHHHHHHHHhhCC-ccccccccCCcHHHHHHHHH
Confidence            4567889999766  34444 47999999976 333221 1 22223456666666655 34789999999999999998


Q ss_pred             Hhc--CCCCeEEEcCCCchhhHHHH--------HHCCC------------eEEEecCCCCCCCCHHHHHHHhhc--CCce
Q 014492          165 CVL--DPGDKIVDCPPTFTMYEFDA--------AVNGA------------AVVKVPRKSDFSLNVELIADAVER--EKPK  220 (423)
Q Consensus       165 ~l~--~~gd~Vl~~~p~y~~~~~~~--------~~~g~------------~~~~v~~~~~~~~d~~~l~~~i~~--~~~~  220 (423)
                      ...  ....+|+....+|++....+        ...+.            ....++     ..|++.+++.+++  .++.
T Consensus       127 ~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~~~~ia  201 (427)
T d2gsaa_         127 LMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-----YNDLEAVKALFAENPGEIA  201 (427)
T ss_dssp             HHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-----TTCHHHHHHHHTTSTTTEE
T ss_pred             HHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-----cchHHHHHHHHHhCCCCeE
Confidence            542  23467888888886322111        11111            122222     3578999998874  4677


Q ss_pred             EEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc-hhhhhccCCcEEEEccChhhhcccCccccc
Q 014492          221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGY  294 (423)
Q Consensus       221 ~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~  294 (423)
                      +|++...+.-.|.+.+    .+.+++||+. |+++|.||++..|..+.. .....+..+.+++   ++|.+| .|+.+|.
T Consensus       202 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~g~~~~~~~~gi~PDi~~---~gK~lg-gG~p~~a  277 (427)
T d2gsaa_         202 GVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRIAYGGVQEKFGVTPDLTT---LGKIIG-GGLPVGA  277 (427)
T ss_dssp             EEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTCHHHHTTCCCSEEE---ECGGGG-TTSCCEE
T ss_pred             EEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccceecccchHHhcCCCHHHHh---hhhccC-CCcceee
Confidence            8888765666788777    7778888887 999999999987743221 1222233444443   569887 7899999


Q ss_pred             cccCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCe-ecCCCceE
Q 014492          295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLN-PYPSYSNF  365 (423)
Q Consensus       295 i~~~~~~~~~l~~~~-----~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~p~~~~~  365 (423)
                      +++.+++.+.+....     ..|+.++++.+++.+.|+.   .+..+...+.-+..++.+.+..++.+... +...++++
T Consensus       278 ~~~~~~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~~~ggm~  357 (427)
T d2gsaa_         278 YGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMF  357 (427)
T ss_dssp             EEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEE
T ss_pred             eeehHHHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcCCCcEEcccCCeE
Confidence            999999887765422     2467889988888877653   34444444444444444444445554322 22233433


Q ss_pred             EEEEeCC--C--------CCH---HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec-ChhhHHHHHHHHh
Q 014492          366 ILCEVTS--G--------MDA---KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG-KPEHTDALMECLM  420 (423)
Q Consensus       366 ~~~~~~~--~--------~~~---~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~~~~~l~~al~  420 (423)
                       .+.+.+  .        .+.   ..+...|.++||++.+...   ..+ -+++. ++++++++.++++
T Consensus       358 -~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll~~Gv~l~p~~~---~~~-~~~l~~Te~dId~~l~al~  421 (427)
T d2gsaa_         358 -GFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF---EAG-FTSLAHTEEDIDATLAAAR  421 (427)
T ss_dssp             -EEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---SCE-ECCTTCCHHHHHHHHHHHH
T ss_pred             -EEEEeccCCCCHHHhhcccHHHHHHHHHHHHHCCEEECCCCC---cce-eCCCCCCHHHHHHHHHHHH
Confidence             222210  1        111   3466778899999887542   111 23433 3445555555444

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=2.2e-13  Score=131.84  Aligned_cols=320  Identities=13%  Similarity=0.119  Sum_probs=200.5

Q ss_pred             CCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-C---CCC--CCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~--~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      .+++.+||+..+  ...+| .+|+|.+|+.+ +   .+.  ..++.....++.+.+.+..+...+.++++++++++++.+
T Consensus        40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~f~~sGseA~e~A  119 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVA  119 (429)
T ss_dssp             TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHH
T ss_pred             CCCCEEEECcccHHHHhhcCCcHHHHHHHHHHHHhcCCcccCCccchHHHHHHHHHHhhhccCcceeeeccccccchhhh
Confidence            456789999776  44455 57999998876 2   221  122333345677777777766667899999999999988


Q ss_pred             HHHhc-------CCCCeEEEcCCCchhhHHHHHH-CC-------------CeEEEecCC------CCCCCCHHHHHHHhh
Q 014492          163 MRCVL-------DPGDKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRK------SDFSLNVELIADAVE  215 (423)
Q Consensus       163 ~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~-~g-------------~~~~~v~~~------~~~~~d~~~l~~~i~  215 (423)
                      ++...       ....+|+....+|+.....+.. .|             ......|..      .....+++++++.+.
T Consensus       120 ~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (429)
T d1s0aa_         120 MKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMA  199 (429)
T ss_dssp             HHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHH
T ss_pred             hhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhhhhhhh
Confidence            87442       2235788888888643332222 11             112222211      111234556655543


Q ss_pred             --cCCceEEEEcCC-CCCcCc-CCCHHHH---HHHHcC-CCEEEEccCCccccCCCch--hhhhccCCcEEEEccChhhh
Q 014492          216 --REKPKCIFLTSP-NNPDGS-IINDEDL---LKILEM-PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRA  285 (423)
Q Consensus       216 --~~~~~~i~l~~p-~NPtG~-~~~~~~l---~~i~~~-~~~li~Deay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~  285 (423)
                        ..++.+|++... ++.-|. ..|.+-+   +++|+. |+++|.||++..|...+..  ....+..+.+++   ++|.+
T Consensus       200 ~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~---~gK~l  276 (429)
T d1s0aa_         200 AHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILC---LGKAL  276 (429)
T ss_dssp             HHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE---ECGGG
T ss_pred             hcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccccccccccccceecccccc---ccccc
Confidence              256778887744 354555 4565544   455555 9999999999988543322  222233344443   57998


Q ss_pred             cccCccccccccCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc---CCC
Q 014492          286 GLAGLRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKD---VPF  355 (423)
Q Consensus       286 g~~G~R~G~i~~~~~~~~~l~~~-------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~  355 (423)
                      +-.+..+|.+++.+++.+.+...       ...|+.++++.+++.+.|+.-+ -++..++.++.-+++.+.|++   .+.
T Consensus       277 ~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~-~~~~~~~~~~~g~~l~~~L~~l~~~~~  355 (429)
T d1s0aa_         277 TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILE-SGDWQQQVADIEVQLREQLAPARDAEM  355 (429)
T ss_dssp             GTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHGGGGGCTT
T ss_pred             ccccccccchhhHHHHHhccCCCCCcceeecCCCCCCcccchhhhccccccc-cccccchhhHHHHHHHHHHHHhccCCc
Confidence            74558999999999998887642       2346788898888888875311 022344445555556666644   343


Q ss_pred             CeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHh
Q 014492          356 LNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLM  420 (423)
Q Consensus       356 ~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~  420 (423)
                      +.-....|.+..+++....+...+.+.+.++|+++.+.+     +.+|++..   +.++++++.++|+
T Consensus       356 v~~vrg~Gl~~~~e~~~~~~~~~~~~~~~~~Gl~~~~~g-----~~i~~~Ppl~it~~eid~~~~~l~  418 (429)
T d1s0aa_         356 VADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFG-----KLIYLMPPYIILPQQLQRLTAAVN  418 (429)
T ss_dssp             EEEEEEETTEEEEEESSCBCHHHHHHHHHHTTEECCCBT-----TEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             eEEEeecccEEEEEecCcccHHHHHHHHHHCCcEEEecC-----CEEEEeCCcCCCHHHHHHHHHHHH
Confidence            332345567777888777788899999999999987754     68999854   4555555555544

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.60  E-value=3.9e-13  Score=130.47  Aligned_cols=325  Identities=14%  Similarity=0.120  Sum_probs=199.3

Q ss_pred             CCCCCCeeEcCCC--CCCCCC-CHHHHHHHhc-C---CC-CCCCCCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYGP-PPEVREALGQ-L---KF-PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI  162 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~---~~-~~~Y~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~  162 (423)
                      ..+++.+||+..+  ...+|. +|++.+|+.+ +   .+ ...++.....++-+.+++...-..+.+++++++++|++.+
T Consensus        37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e~A  116 (431)
T d1zoda1          37 DADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAA  116 (431)
T ss_dssp             CTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHH
T ss_pred             ECCCCEEEEcccCHHhhhhcCCCHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHhCCcccceeeecccccchHHHH
Confidence            4567889999765  455653 5899888876 2   22 1233444445677777777643457899999999999999


Q ss_pred             HHHh--cCCCCeEEEcCCCchhhHHHHHHCC------------CeEEEecCCCCC---------CCC---HHHHHHHhh-
Q 014492          163 MRCV--LDPGDKIVDCPPTFTMYEFDAAVNG------------AAVVKVPRKSDF---------SLN---VELIADAVE-  215 (423)
Q Consensus       163 ~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~v~~~~~~---------~~d---~~~l~~~i~-  215 (423)
                      ++..  ....+.|+...-.|+.....+-..+            .....++....+         ..+   ++.++..+. 
T Consensus       117 lk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (431)
T d1zoda1         117 IRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDR  196 (431)
T ss_dssp             HHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHHHHHHHH
Confidence            8853  2234778888888875444333211            112233311110         111   233333322 


Q ss_pred             --cCCceEEEEcCCCCCcCcCCC----HHHHHHHHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhc
Q 014492          216 --REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       216 --~~~~~~i~l~~p~NPtG~~~~----~~~l~~i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                        ..++.+|++...+.-.|.+.+    .++++++|+. |+++|.||++..|...+.  .....+..+.+++   ++|.++
T Consensus       197 ~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~---~gK~l~  273 (431)
T d1zoda1         197 QSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILT---LSKTLG  273 (431)
T ss_dssp             HCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE---ECHHHH
T ss_pred             hccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhc---cccccc
Confidence              246778888755555666654    5667777777 999999999998653332  2222333444443   579998


Q ss_pred             ccCccccccccCHHHHHHHHHhc----CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeec
Q 014492          287 LAGLRVGYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPY  359 (423)
Q Consensus       287 ~~G~R~G~i~~~~~~~~~l~~~~----~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  359 (423)
                       .|+.++.+++.++..+......    ..++.++++..++.+.|+.   ++.+++..+.-+...+.+.+.+++.+.+.-.
T Consensus       274 -gG~p~~av~~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~i~~v  352 (431)
T d1zoda1         274 -AGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDV  352 (431)
T ss_dssp             -TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             -cccccceeeeeecchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCCCeEEE
Confidence             8889998888988877765532    2367788888888777653   3445555555555556666666667755433


Q ss_pred             CCCceEEEEEeC--------CCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHH
Q 014492          360 PSYSNFILCEVT--------SGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECL  419 (423)
Q Consensus       360 p~~~~~~~~~~~--------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al  419 (423)
                      ...|.+.-+++.        ...-...+.+.+.++|+...........+.||++..   +.++.+++.+++
T Consensus       353 rG~Glm~~ie~~~~~~~~~~~~~~~~~i~~~~~~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~eid~~~~~l  423 (431)
T d1zoda1         353 RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLL  423 (431)
T ss_dssp             EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHH
T ss_pred             eecceEEEEEEecCCcccCccHHHHHHHHHHHHHhCcccCeeeecCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence            455666555552        111256788889999987543333344678999975   344444444433

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.59  E-value=1.2e-14  Score=138.10  Aligned_cols=304  Identities=13%  Similarity=0.046  Sum_probs=183.1

Q ss_pred             CCCCCCHHHHHHHhcC-CC-----------CCCCCCc--chHHHHHHHHHHhCCCCC-cEEEeCCHHHHH-HHHHHHhcC
Q 014492          105 NPYGPPPEVREALGQL-KF-----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELI-DLIMRCVLD  168 (423)
Q Consensus       105 ~~~~~~~~v~~al~~~-~~-----------~~~Y~~~--g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al-~~~~~~l~~  168 (423)
                      .|...|++|+++|.+. ..           +|+-+..  -+.+.|+.|+++++.+.+ .|++++|++.+. ..+...+..
T Consensus        10 GP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ea~~~~l~~   89 (361)
T d2c0ra1          10 GPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLK   89 (361)
T ss_dssp             SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCC
T ss_pred             CCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHhcccc
Confidence            4555679999999762 11           1221211  256899999999998544 777777776554 666666788


Q ss_pred             CCCeEEEcCCCc-h-hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC
Q 014492          169 PGDKIVDCPPTF-T-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM  246 (423)
Q Consensus       169 ~gd~Vl~~~p~y-~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~  246 (423)
                      +|+.+++..-.. . .+...++..|..+..+..+.+...+++.+++.+...  +..   +.+|.||...+..++.++++.
T Consensus        90 ~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~v~~~tg~~~~~~~i~~~~~~  164 (361)
T d2c0ra1          90 EGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQD--NAA---YLHLTSNETIEGAQFKAFPDT  164 (361)
T ss_dssp             TTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCT--TEE---EEEEESEETTTTEECSSCCCC
T ss_pred             CCCceEEEeechhhhhhhhhhhhcCceeeeeccccccccchhhhhhhcccC--cce---EEEEecccceecceEEEeecc
Confidence            888877554333 2 556677788999988887666677788887776532  222   345789999999999888887


Q ss_pred             -CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHH------------HHHHHHhcC-CC
Q 014492          247 -PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI------------IEYLWRAKQ-PY  312 (423)
Q Consensus       247 -~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~------------~~~l~~~~~-~~  312 (423)
                       |+++++|.+.+.... +-.   ....+  +.+.|.+|.++++|.-.+++. .+..            ......... ..
T Consensus       165 ~~al~~vDavss~g~~-~id---~~~~d--i~~~s~~k~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (361)
T d2c0ra1         165 GSVPLIGDMSSDILSR-PFD---LNQFG--LVYAGAQKNLGPSGVTVVIVR-EDLVAESPKHLPTMLRYDTYVKNNSLYN  237 (361)
T ss_dssp             TTSCEEEECTTTTTSS-CCC---GGGCS--EEEEETTTTTCCSSCEEEEEE-GGGSSSCCTTSCGGGCHHHHHHTTTCSS
T ss_pred             CCceEEEEeecccccc-ccc---cccce--eEEEecccccccccCcEEEEE-hHHhhhCccccccccccccccccccccc
Confidence             999999999874432 111   12233  455677899887774222222 1111            111111111 12


Q ss_pred             CCcHHHHHHHHH---HhCChHHHHHHHHHHHHHHHHHHHHHccCCCC-eec--CC--CceEEEEEeCCCCCHHHHHHHHH
Q 014492          313 NVSVAAEVAACA---ALQNPIYLEKVKEALIKERERLFKLLKDVPFL-NPY--PS--YSNFILCEVTSGMDAKKLKDDLA  384 (423)
Q Consensus       313 ~~~~~~~~a~~~---~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~--p~--~~~~~~~~~~~~~~~~~l~~~L~  384 (423)
                      ..++....++..   ............++.++.+..+.......... ...  +.  ...-+.+.++++.+..++.+.|.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~~~~~~~~~~~L~  317 (361)
T d2c0ra1         238 TPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASE  317 (361)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHH
T ss_pred             cccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEEEEECCCcccHHHHHHHHH
Confidence            222222111111   11112223344444455555555555443222 111  11  12346677777778889999999


Q ss_pred             hCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          385 KMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       385 ~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ++||.++.|...  -+.+||++.   +.+++++|.++|+.+
T Consensus       318 ~~GI~~~~G~~~--~g~~RIs~~~~~~~edv~~Lv~~l~~~  356 (361)
T d2c0ra1         318 QEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHF  356 (361)
T ss_dssp             HTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HCCCEEecCCCc--CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            999998886422  134999974   567888888888765

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.58  E-value=1.4e-13  Score=131.11  Aligned_cols=268  Identities=16%  Similarity=0.119  Sum_probs=183.1

Q ss_pred             HHHHHHHhcCCCCCCCCC-cchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc-CCC--CeEEEcCCCchhhHHH
Q 014492          111 PEVREALGQLKFPYIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-DPG--DKIVDCPPTFTMYEFD  186 (423)
Q Consensus       111 ~~v~~al~~~~~~~~Y~~-~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~-~~g--d~Vl~~~p~y~~~~~~  186 (423)
                      ++-++++.+......|.. +...++++.+++++|.+  +++.+++++.|+.++++++- .+|  ++|++++-+|......
T Consensus        12 ~~~~~~v~~~l~~~~~~~G~~v~~fE~~~~~~~g~k--~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~t~~a~~~a   89 (371)
T d2fnua1          12 KEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANM   89 (371)
T ss_dssp             HHHHHHHHHHHTSSCCSSSHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHH
T ss_pred             HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHHCcC--eEEEEecHHHHHHHHHHHhcccCCCCCeeeccccccccccee
Confidence            344455555322223432 34688999999999964  67888889999999999873 344  4899999999988888


Q ss_pred             HHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCc
Q 014492          187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES  264 (423)
Q Consensus       187 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~  264 (423)
                      ....|++++.++.+.+..++.+++++.+. .++++|++.   +.-|...+.+++.++++. +++||+|.+++.++. .+.
T Consensus        90 i~~~G~~pv~vDi~~~~~~~~~~~~~~~~-~~t~avi~v---h~~G~~~~~~~i~~~~~~~~i~lIEDaaqa~Ga~~~~~  165 (371)
T d2fnua1          90 LLESGYTPVFAGIKNDGNIDELALEKLIN-ERTKAIVSV---DYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNK  165 (371)
T ss_dssp             HHHTTCEEEECCBCTTSSBCGGGSGGGCC-TTEEEEEEE---CGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE
T ss_pred             eeccCcccccccccccccccchhhhhhcc-chhhccccc---cccccccccccccccccccchhhccchhhccCceeccc
Confidence            88999999999987777778888888886 799999966   456999999999999998 999999999986552 222


Q ss_pred             hhhhhccCCcEEEEccC--hhhhcccCcccccccc-CHHHHHHHHHhcCC------------------CCCcHHHHHHHH
Q 014492          265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP------------------YNVSVAAEVAAC  323 (423)
Q Consensus       265 ~~~~~~~~~~~i~i~S~--SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~------------------~~~~~~~~~a~~  323 (423)
                      ....  ..+  +.+.||  +|.++..+  -|.+++ ++++.+++......                  +.++.+..+.+.
T Consensus       166 ~~G~--~g~--~~~~Sf~~~K~l~~g~--GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl  239 (371)
T d2fnua1         166 KVGG--FAL--ASVFSFHAIKPITTAE--GGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGL  239 (371)
T ss_dssp             ETTS--SSS--EEEEECCTTSSSCCSS--CEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHH
T ss_pred             cCCc--ccc--cccccccccccccccc--ceEEEeechhhhhhcccccccccccccccccccccccccccccchhhhhhh
Confidence            2211  122  344455  78876433  477776 46777777765321                  235566666566


Q ss_pred             HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeec-C--C--CceE-EEEEeCC--CCCHHHHHHHHHhCCcEEEeC
Q 014492          324 AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPY-P--S--YSNF-ILCEVTS--GMDAKKLKDDLAKMGVMIRHY  393 (423)
Q Consensus       324 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-p--~--~~~~-~~~~~~~--~~~~~~l~~~L~~~gI~v~~~  393 (423)
                      .-|+.   +++..++-+++.+++.+.|++.+++... +  .  ..++ ..+.+..  ..+.+++.+.|.++||.++..
T Consensus       240 ~qL~~---l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~L~~~gI~~~~~  314 (371)
T d2fnua1         240 SQLKK---APFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVH  314 (371)
T ss_dssp             HHHTT---HHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCC
T ss_pred             hhhhh---ccchhhhhhhhhhhhcccccccccccccccccccccccccccccccccchhHHHHHHHHHHHCCCCccee
Confidence            66654   3444444456677777888887765432 1  1  1122 2233332  234678999999999988743

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.56  E-value=2.7e-13  Score=129.22  Aligned_cols=249  Identities=17%  Similarity=0.107  Sum_probs=168.2

Q ss_pred             chHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCeEEEcCCCchhhHHHHHHCCCeEEEecCCCCCCCC-H
Q 014492          130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN-V  207 (423)
Q Consensus       130 g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d-~  207 (423)
                      ...++++.+++++|.+  ..+.++++|.|+.++++++ +++||+|++++-+|......+...|++++.++.+++...+ .
T Consensus        22 ~~~~fE~~~~~~~~~~--~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~~~~~~~g~~pv~~Di~~~~~~~~~   99 (374)
T d1o69a_          22 FVNRFEQSVKDYSKSE--NALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVD   99 (374)
T ss_dssp             HHHHHHHHHHHHHCCS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHH
T ss_pred             HHHHHHHHHHHHHCcC--eEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhHHHHhhccceeEecccccccccccc
Confidence            3688999999999964  6888899999999999988 7889999999999998888888999999999976544333 3


Q ss_pred             HHHH--HHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccC-CCchhhhhccCCcEEEEccC--
Q 014492          208 ELIA--DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF--  281 (423)
Q Consensus       208 ~~l~--~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~-~~~~~~~~~~~~~~i~i~S~--  281 (423)
                      +..+  ..+. .++++|+++   +..|...+.+++.++|+. |++||+|.+++.+.. .+......  .+  +.+.||  
T Consensus       100 ~~~~~~~~~~-~~~~aii~~---~~~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~~--gd--~~~fSf~~  171 (374)
T d1o69a_         100 LLKLAIKECE-KKPKALILT---HLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTF--GE--FGVYSYNG  171 (374)
T ss_dssp             HHHHHHHHCS-SCCCEEEEE---CGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS--SS--EEEEECCT
T ss_pred             cccccchhcc-ccccccccc---ccccchhhhHHHHHHhhccCcchhhhhhhhhcceECCeecCCC--Cc--eEEEeccC
Confidence            3332  3333 678999965   446889999999999997 999999999986552 22222221  22  555566  


Q ss_pred             hhhhcccCcccccccc-CHHHHHHHHHhcCC----------------CCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Q 014492          282 SKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP----------------YNVSVAAEVAACAALQNPIYLEKVKEALIKERE  344 (423)
Q Consensus       282 SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~----------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  344 (423)
                      +|.++..|  -|.++. ++++.+++...+..                +.++.+..+.+..-|+.   +++..++-++..+
T Consensus       172 ~K~l~tge--GG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~---l~~~i~~r~~i~~  246 (374)
T d1o69a_         172 NKIITTSG--GGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEV---LEQRVLKKREIYE  246 (374)
T ss_dssp             TSSSCCSS--CEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHH
T ss_pred             cccccccc--ceeehhhhHHHHHhhccccccccccccccccccCCccccccchhhhhhHHHHhh---hhhhcchhHHHHH
Confidence            58876443  366665 57777777655321                23566666666666654   3334444455666


Q ss_pred             HHHHHHccCCCCeecCC----Cc--eEEEEEeC-------------------CCCCHHHHHHHHHhCCcEEEeC
Q 014492          345 RLFKLLKDVPFLNPYPS----YS--NFILCEVT-------------------SGMDAKKLKDDLAKMGVMIRHY  393 (423)
Q Consensus       345 ~l~~~L~~~~~~~~~p~----~~--~~~~~~~~-------------------~~~~~~~l~~~L~~~gI~v~~~  393 (423)
                      .+.+.|.+.......+.    ..  .++.+...                   ...+.+++.+.|.++||.++++
T Consensus       247 ~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~  320 (374)
T d1o69a_         247 WYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPL  320 (374)
T ss_dssp             HHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred             HHHhhccccccccccccCCCCChhheeeeeccccccccccccccccchhhccchhhHHHHHHHHHHCCCCEEEe
Confidence            77777766432221111    11  12222111                   0124678999999999988754

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=1.4e-13  Score=133.28  Aligned_cols=324  Identities=13%  Similarity=0.113  Sum_probs=194.5

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhc-CCC-CCC--C--CCcchHHHHHHHHHHhCCC-CCcEEEeCCHHHHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PYI--Y--PDPESRRLRAALAKDSGLE-SDHILVGCGADELID  160 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~~--Y--~~~g~~~lr~~ia~~~g~~-~~~i~~t~G~~~al~  160 (423)
                      +.+++.+||+..+  .+.+| .+|++.+|+.+ +.. .+.  +  ......++-+.+.+.+.-+ .+.++++++++++.+
T Consensus        36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e  115 (425)
T d1sffa_          36 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVE  115 (425)
T ss_dssp             ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHH
T ss_pred             eCCCCEEEEcCcCHHhhcccCCcHHHHHHHHHHHhhcCCcccccccCcHHHHHHHHHHhhhhhcccceeeeeccccchhh
Confidence            4567889999876  55566 57999999976 322 111  1  1222446777777777432 368999999999999


Q ss_pred             HHHHHhc--CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEEEecCC--CCCCC--C----HHHHHHH-hh
Q 014492          161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRK--SDFSL--N----VELIADA-VE  215 (423)
Q Consensus       161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~~v~~~--~~~~~--d----~~~l~~~-i~  215 (423)
                      .+++...  ....+|+....+|++....+.. .|.             .....+.+  .....  .    .+++... ..
T Consensus       116 ~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (425)
T d1sffa_         116 NAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAA  195 (425)
T ss_dssp             HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCC
T ss_pred             hHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhccc
Confidence            9988542  2236788888888754443332 221             11222211  01000  0    1111111 11


Q ss_pred             cCCceEEEEcCCCCCcCcCC-CHHHHHH---HHcC-CCEEEEccCCccccCCCc--hhhhhccCCcEEEEccChhhhccc
Q 014492          216 REKPKCIFLTSPNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGLA  288 (423)
Q Consensus       216 ~~~~~~i~l~~p~NPtG~~~-~~~~l~~---i~~~-~~~li~Deay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~g~~  288 (423)
                      ..++.+|++...+...|... +.+.++.   +|+. |+++|.||++..+...+.  .....+..+.++   +++|.+| .
T Consensus       196 ~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~---~~gK~l~-g  271 (425)
T d1sffa_         196 PEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT---TFAKSIA-G  271 (425)
T ss_dssp             GGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE---EECGGGG-T
T ss_pred             ccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccce---ecccccC-C
Confidence            24577888876565567654 5555544   5555 999999999998643222  122222334433   3689998 7


Q ss_pred             CccccccccCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCc
Q 014492          289 GLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQN---PIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYS  363 (423)
Q Consensus       289 G~R~G~i~~~~~~~~~l~~~~--~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~  363 (423)
                      |+.+|.+++++++.+.+....  ..|+.++++.+++.+.|+.   .+..+...+.-...++.+.+.+++.+.+.-....|
T Consensus       272 G~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~G  351 (425)
T d1sffa_         272 GFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLG  351 (425)
T ss_dssp             SSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEET
T ss_pred             CcceEEEEEcHHHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhhCCceEEEEccc
Confidence            899999999999887664332  3477889999998888864   23444444444555555666666666544344556


Q ss_pred             eEEEEEeCC----C-CC---HHHHHHHHHhCCcEEEeCCCCCCCCeEEEEecChhhHHHHHHHHh
Q 014492          364 NFILCEVTS----G-MD---AKKLKDDLAKMGVMIRHYNNKELKGYVRVSVGKPEHTDALMECLM  420 (423)
Q Consensus       364 ~~~~~~~~~----~-~~---~~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~~~~~~~~l~~al~  420 (423)
                      .+..+.+.+    . .+   ...+.+.|.++||++.+.+.  ..+.||++.....+.++|.++++
T Consensus       352 l~~~i~f~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~g~--~~n~i~~~PpL~it~~eid~~l~  414 (425)
T d1sffa_         352 AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLE  414 (425)
T ss_dssp             TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHH
T ss_pred             cEEEEEEeccCccCCccHHHHHHHHHHHHHCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHH
Confidence            666666631    1 11   35677888899999987542  24679999753222234444443

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.52  E-value=2.4e-13  Score=133.03  Aligned_cols=287  Identities=11%  Similarity=0.030  Sum_probs=185.7

Q ss_pred             HHHHHHHHHhCCCC---------CcEEEeCCHHHHHHHHHHHhcC----------CC---------CeEEEcCCCchhhH
Q 014492          133 RLRAALAKDSGLES---------DHILVGCGADELIDLIMRCVLD----------PG---------DKIVDCPPTFTMYE  184 (423)
Q Consensus       133 ~lr~~ia~~~g~~~---------~~i~~t~G~~~al~~~~~~l~~----------~g---------d~Vl~~~p~y~~~~  184 (423)
                      ++-+.+++.+|.+.         ..-++|+|+++++..++.+-..          +|         -.|++++-+|.++.
T Consensus       117 ~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~  196 (476)
T d1js3a_         117 VMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE  196 (476)
T ss_dssp             HHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH
T ss_pred             HHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccccHHHH
Confidence            35555666677642         2467899998888777653211          11         14778888999999


Q ss_pred             HHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcC-----CceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCcc
Q 014492          185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE  258 (423)
Q Consensus       185 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~  258 (423)
                      ..+...|..++.+|.++++.+|+++|++.+++.     .|-+|+.+..++.||.+-|++++.+||+. ++|+++|.+|+.
T Consensus       197 ka~~~lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg  276 (476)
T d1js3a_         197 RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAG  276 (476)
T ss_dssp             HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGG
T ss_pred             HHHHhcCceEEEeccCCCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHHHHHHHHhcCcEEEEecccch
Confidence            999999999999999989999999999999641     24567777899999999999999999997 999999999987


Q ss_pred             ccC-CCchhhhhc-cCCcEEEEccChhhhcccCccccccccCH-HHHHHHHH--------hcC-C--------CC-----
Q 014492          259 FSG-LESRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWR--------AKQ-P--------YN-----  313 (423)
Q Consensus       259 ~~~-~~~~~~~~~-~~~~~i~i~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~--------~~~-~--------~~-----  313 (423)
                      +.. .......+. ...-.-+..+++|.++ ....+|.++... ........        ... .        ++     
T Consensus       277 ~~~~~~~~~~~~~gi~~aDSit~d~HK~l~-~P~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr  355 (476)
T d1js3a_         277 SAFICPEFRHLLNGVEFADSFNFNPHKWLL-VNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR  355 (476)
T ss_dssp             GGGGSTTTGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCC
T ss_pred             hhhhhcchhhhhcCCcccceeeecCccccc-cCCcceeecccchHHHHHHHhcChhhhccccccccccccccccccccch
Confidence            552 111111111 1112255567899765 444567666643 32221110        000 0        11     


Q ss_pred             -CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCee-cCCCceEEEEEeCCCC-CHHHHHHHHHhCC-cE
Q 014492          314 -VSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNP-YPSYSNFILCEVTSGM-DAKKLKDDLAKMG-VM  389 (423)
Q Consensus       314 -~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~p~~~~~~~~~~~~~~-~~~~l~~~L~~~g-I~  389 (423)
                       ...+...++...+. .+.+++..++..++.+++.+.|++.+.+.+ .|..-+.+.+++.+.. -.+++.++|.+.| +.
T Consensus       356 ~~~al~lw~~l~~~G-~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~~p~l~iV~Fr~~~~d~~n~~l~~~l~~~G~~~  434 (476)
T d1js3a_         356 RFRSLKMWFVFRMYG-VKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSDGLNEALLERINSARKIH  434 (476)
T ss_dssp             CCTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCB
T ss_pred             hhHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCceEEEEEEccCChHHHHHHHHHHHhcCCEE
Confidence             11222233333332 345677888888899999999999877664 4666777888885321 1246777777665 44


Q ss_pred             EEeCCCCCCCCeEEEEec----ChhhHHHHHHHHhhh
Q 014492          390 IRHYNNKELKGYVRVSVG----KPEHTDALMECLMHL  422 (423)
Q Consensus       390 v~~~~~~~~~~~iRis~~----~~~~~~~l~~al~~l  422 (423)
                      +.+.. -.+..++|++++    +.++++.+.+.|+++
T Consensus       435 ~s~t~-~~g~~~lR~~i~n~~Tt~~did~~~~~i~~~  470 (476)
T d1js3a_         435 LVPCR-LRGQFVLRFAICSRKVESGHVRLAWEHIRGL  470 (476)
T ss_dssp             CEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             Eeeee-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            54322 123458999975    244566666666543

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=5e-14  Score=133.07  Aligned_cols=310  Identities=12%  Similarity=0.004  Sum_probs=183.1

Q ss_pred             eEcCCCCCCCCCCHHHHHHHhcC-C-C----------CCCCCCc--chHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHHH
Q 014492           98 VKIDANENPYGPPPEVREALGQL-K-F----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLI  162 (423)
Q Consensus        98 i~l~~~~~~~~~~~~v~~al~~~-~-~----------~~~Y~~~--g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~~  162 (423)
                      .+|+.  .|...|++|++++.+. . +          .|+-+..  -..+.|+.++++++.+.+ .|++++|++++...+
T Consensus         3 ~nF~p--GP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a   80 (360)
T d1bjna_           3 FNFSS--GPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA   80 (360)
T ss_dssp             EECCS--SSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred             EEeCC--CCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhh
Confidence            45543  4555689999999873 1 1          1222221  156899999999998644 788888877766555


Q ss_pred             HH-HhcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHHH
Q 014492          163 MR-CVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED  239 (423)
Q Consensus       163 ~~-~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~  239 (423)
                      .. .+..+++.+++..-.+.  .+...++..|..++.+..+.+...+.+.++..+. .+++++.+++.+|-||...+..+
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~~~t~~~~~~~~  159 (360)
T d1bjna_          81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQ-LSDNAAYMHYCPNETIDGIAIDE  159 (360)
T ss_dssp             HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCC-CCSSCSCEEECSEETTTTEECCC
T ss_pred             hhhcccccccccceecccchhhhhHHHHhhcCccceeeccccCCCcchhhhhhhhc-cCCceeEEEecccccccCccccc
Confidence            44 45666777777665554  3445555677777776644444455555555554 67888888888899998887654


Q ss_pred             HHHHHcC--CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHH------------HHH
Q 014492          240 LLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII------------EYL  305 (423)
Q Consensus       240 l~~i~~~--~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~------------~~l  305 (423)
                      +   .+.  ++++++|.+.+.....-.      ..+-.+.+.|.+|.+++++.- |+++..+...            ...
T Consensus       160 i---~~~~~~~~v~vDa~~~~~~~~vd------~~~~dv~~~ss~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  229 (360)
T d1bjna_         160 T---PDFGADVVVAADFSSTILSRPID------VSRYGVIYAGAQKNIGPAGLT-IVIVREDLLGKANIACPSILDYSIL  229 (360)
T ss_dssp             C---CCCCTTCCEEEECTTTTTSSCCC------GGGCSEEEEETTTTTSSTTCE-EEEEEGGGCSCCCTTSCGGGCHHHH
T ss_pred             e---ecccccceeeeeeeccccceeee------eccceeEEEEcccccccCCCc-eeEeeehhhhhccccCCcchhhHHH
Confidence            4   233  888999988774332111      112236777788888765533 3333221111            111


Q ss_pred             HHh-cCCCCCcHHHHHHHHHHh---CChHHHHHHHHHHHHHHHHHHHHHccCCCCeecC----CCceEEEEEeCCCCCHH
Q 014492          306 WRA-KQPYNVSVAAEVAACAAL---QNPIYLEKVKEALIKERERLFKLLKDVPFLNPYP----SYSNFILCEVTSGMDAK  377 (423)
Q Consensus       306 ~~~-~~~~~~~~~~~~a~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p----~~~~~~~~~~~~~~~~~  377 (423)
                      ... .............+..+.   ......+...++.++....+...+.........+    .....+.+.+|++.+.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~~~~~  309 (360)
T d1bjna_         230 NDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLADSALDK  309 (360)
T ss_dssp             HHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGBCSSEEEEEESSGGGHH
T ss_pred             HhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccccceEEEEEcCCcccHH
Confidence            111 112222222222222111   1122344455555555555555555544322211    11234667888888899


Q ss_pred             HHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          378 KLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       378 ~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ++.+.|.++||.++.|..  .-+.+|||+.   +.++.++|.++|+++
T Consensus       310 ~~~~~l~~~Gi~~~~G~~--~~g~~Ris~~~~~t~edV~~li~~l~e~  355 (360)
T d1bjna_         310 LFLEESFAAGLHALKGHR--VVGGMRASIYNAMPLEGVKALTDFMVEF  355 (360)
T ss_dssp             HHHHHHHHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCEeecCCC--ccCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            999999999999887632  1235999974   577888888888875

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=1.4e-13  Score=135.08  Aligned_cols=318  Identities=12%  Similarity=0.061  Sum_probs=184.6

Q ss_pred             CeeEcCCCCCCCCCCHHHHHHHhcCCCCCCC-CCcchHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhcCCCCe--
Q 014492           96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK--  172 (423)
Q Consensus        96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-~~~g~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~~~gd~--  172 (423)
                      .+||+-+....-.......+++..  ....| .++...+|++++++++|.  +.+++++++++++..++.+++++|+.  
T Consensus        42 ~~idl~sd~~t~~~~~~~~a~~~~--gd~~Y~~~~~~~~le~~~a~l~G~--~~~~~~~sGt~A~~~a~~~~~~~g~~~~  117 (467)
T d2v1pa1          42 VFIDLLTDSGTGAVTQSMQAAMMR--GDEAFSGSRSYYALAESVKNIFGY--QYTIPTHQGRGAEQIYIPVLIKKREQEK  117 (467)
T ss_dssp             CSEECSCCTTCSCCCHHHHHHTTS--CCCCSSSCHHHHHHHHHHHHHTCC--SEEEEECSSTTTHHHHHHHHHHHHHHHH
T ss_pred             eeeeccccccchhhHHHHHhhccc--cchhhcCCchHHHHHHHHHHHHCC--CEEEECCCCHHHHHHHHHHHhhccceEe
Confidence            467775533222223444343332  12457 456788999999999996  46788888889999999988776553  


Q ss_pred             -------EEEcCCCchhhHHHHHHCCCeEEEecCCC----------CCCCCHHHHHHHhhc---CCceEEEEcCCCCCc-
Q 014492          173 -------IVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVER---EKPKCIFLTSPNNPD-  231 (423)
Q Consensus       173 -------Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~l~~~i~~---~~~~~i~l~~p~NPt-  231 (423)
                             ++.....|......+...|+.++.++.+.          ...+|++++++.+.+   ..++++++.+.+|.. 
T Consensus       118 ~~~~~~~i~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~g  197 (467)
T d2v1pa1         118 GLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAG  197 (467)
T ss_dssp             CCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGG
T ss_pred             cCCCCcEEEEecccccccHHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccc
Confidence                   44444455566667778999999887432          346899999998864   346778877777755 


Q ss_pred             CcCCCHHHHHHHHc---C-CCEEEEccCCcccc----------CCC-chh---hhhccCCcEEEEccChhhhcccCcccc
Q 014492          232 GSIINDEDLLKILE---M-PILVVLDEAYTEFS----------GLE-SRM---EWVKKHDNLIVLRTFSKRAGLAGLRVG  293 (423)
Q Consensus       232 G~~~~~~~l~~i~~---~-~~~li~Deay~~~~----------~~~-~~~---~~~~~~~~~i~i~S~SK~~g~~G~R~G  293 (423)
                      |.+++.+.+++|.+   . |+++|+|+++....          +.+ ...   .... ....++..|.+|.++  |...|
T Consensus       198 g~~~~~~~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~d~~s~s~~K~~~--~~~gg  274 (467)
T d2v1pa1         198 GQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETY-KYADMLAMSAKKDAM--VPMGG  274 (467)
T ss_dssp             CBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHG-GGCSEEEEESSSTTC--CSSCE
T ss_pred             cccCCHHHHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhc-ccCCEEEecCCCCCC--CCCce
Confidence            57778777765554   4 99999999985321          111 111   1111 122356667888765  33456


Q ss_pred             ccccCHHHHHHHHH----h---cC----CCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCC
Q 014492          294 YGAFPLSIIEYLWR----A---KQ----PYNVSVAAEVAACAALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSY  362 (423)
Q Consensus       294 ~i~~~~~~~~~l~~----~---~~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~  362 (423)
                      ++..+++.+....+    .   ..    ..........+....+... ...+..++..++.+++.+.|++.+... .+..
T Consensus       275 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~v-~~~~  352 (467)
T d2v1pa1         275 LLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG-MNLDWLAYRIAQVQYLVDGLEEIGVVC-QQAG  352 (467)
T ss_dssp             EEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHTTCCE-EEEC
T ss_pred             eEEecchhhhhHHHhhcccccccccCcchhhhHHHHHHHHHHHhHHh-hhHHHHHHHHHHHHHHHHHHHhcCCcc-cCCC
Confidence            77766543322211    1   11    1233444433333333211 112333444567778888888776433 2333


Q ss_pred             ceEEEEEe----CC----CCCHHHHHHH-HHhCCcEEEeCC-------------CCCCCCeEEEEec----ChhhHHHHH
Q 014492          363 SNFILCEV----TS----GMDAKKLKDD-LAKMGVMIRHYN-------------NKELKGYVRVSVG----KPEHTDALM  416 (423)
Q Consensus       363 ~~~~~~~~----~~----~~~~~~l~~~-L~~~gI~v~~~~-------------~~~~~~~iRis~~----~~~~~~~l~  416 (423)
                      +..+.+..    +.    ......+... +.+.||.....+             .+.....+|+++.    +.+++|++.
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv  432 (467)
T d2v1pa1         353 GHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFII  432 (467)
T ss_dssp             SSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHH
T ss_pred             ccceeecchhhcCCcchhhhhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHH
Confidence            33332221    21    1223444444 458888654211             1334568999875    567778888


Q ss_pred             HHHhhh
Q 014492          417 ECLMHL  422 (423)
Q Consensus       417 ~al~~l  422 (423)
                      ++|+++
T Consensus       433 ~~l~~v  438 (467)
T d2v1pa1         433 EAFKHV  438 (467)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888764

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.44  E-value=4.6e-12  Score=123.60  Aligned_cols=318  Identities=13%  Similarity=0.111  Sum_probs=177.1

Q ss_pred             CCCCCCeeEcCCC--CCCCC-CCHHHHHHHhcC-C-----CCCCCCCcc----hHHHHHHHHHHhCCCCCcEEEeCCHHH
Q 014492           91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQL-K-----FPYIYPDPE----SRRLRAALAKDSGLESDHILVGCGADE  157 (423)
Q Consensus        91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-~-----~~~~Y~~~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~  157 (423)
                      ..+++.+||+..+  .+.+| .+|+|.+++.+. .     ....+....    .++|.+.+.+..+-..+.+++++++++
T Consensus        49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~a~~lae~l~~~~~~~~~~v~f~~sGse  128 (461)
T d1ohwa_          49 DVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSC  128 (461)
T ss_dssp             BTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred             ECCCCEEEEcccCHHHHhhcCCcHHHHHHHHHHHhhhhhcccccccccchHHHHHHHHHHHHhhhccCcceeeeecchhh
Confidence            4567889998755  34454 368999999762 1     111122222    233444444444445578999999999


Q ss_pred             HHHHHHHHhc----------------------------CCCCeEEEcCCCchhhHHHHHH-CCC-------------eEE
Q 014492          158 LIDLIMRCVL----------------------------DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVV  195 (423)
Q Consensus       158 al~~~~~~l~----------------------------~~gd~Vl~~~p~y~~~~~~~~~-~g~-------------~~~  195 (423)
                      +++.+++...                            .+...|+....+|++....+.. .|-             ...
T Consensus       129 Ave~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~  208 (461)
T d1ohwa_         129 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA  208 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEE
T ss_pred             hhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCCccc
Confidence            9999887431                            2235788888888754333322 221             111


Q ss_pred             EecC-CCCC-----------CCCHHHHHHHhh-----cCCceEEEEcCCCCCcCcCC-CHHHHH---HHHcC-CCEEEEc
Q 014492          196 KVPR-KSDF-----------SLNVELIADAVE-----REKPKCIFLTSPNNPDGSII-NDEDLL---KILEM-PILVVLD  253 (423)
Q Consensus       196 ~v~~-~~~~-----------~~d~~~l~~~i~-----~~~~~~i~l~~p~NPtG~~~-~~~~l~---~i~~~-~~~li~D  253 (423)
                      ..+. ....           ..+.+.+++.+.     ..++.+|++...+...|.+. +.+-++   ++|+. |+++|.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~D  288 (461)
T d1ohwa_         209 PFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVD  288 (461)
T ss_dssp             CCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             ccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcceecc
Confidence            1110 0000           012344554442     24677888887676667654 544444   45555 9999999


Q ss_pred             cCCccccCCCchhh--hhcc--CCcEEEEccChhhhcccCccccccccCHHHHHH-HHHhcCCCCCcHHHHHHHHHHhCC
Q 014492          254 EAYTEFSGLESRME--WVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY-LWRAKQPYNVSVAAEVAACAALQN  328 (423)
Q Consensus       254 eay~~~~~~~~~~~--~~~~--~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~~-l~~~~~~~~~~~~~~~a~~~~l~~  328 (423)
                      |++..|...+....  ..+.  .+.++   +++|.++ .|    +......+... .......|..++++..++.+.|+-
T Consensus       289 EV~tG~gRtG~~~~~e~~gi~~~PDiv---~~gK~l~-~g----~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~  360 (461)
T d1ohwa_         289 EVQTGGGSTGKFWAHEHWGLDDPADVM---TFSKKMM-TG----GFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINI  360 (461)
T ss_dssp             CTTTCSSTTSSSSGGGGGCCSSCCSEE---EECGGGS-SE----EEEECGGGSCSSTTSSCCSCSSCHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccCchhh---hhhhccc-cc----ccccccccccccccccccccccccccchhhcccchh
Confidence            99998864443222  1111  23333   4679875 32    22222211110 011223467788888888877763


Q ss_pred             ---hHHHHHHHHHHHHHHHHHHHHHccCC-CCeecCCCceEEEEEeCCCCCHHHHHHHHHhCCcEEEeCCCCCCCCeEEE
Q 014492          329 ---PIYLEKVKEALIKERERLFKLLKDVP-FLNPYPSYSNFILCEVTSGMDAKKLKDDLAKMGVMIRHYNNKELKGYVRV  404 (423)
Q Consensus       329 ---~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~p~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~iRi  404 (423)
                         ++.+++..+.-+..++.+.+...+.+ .+.-..+.|.++.+++++.....++++.+.++||++.+.+    ++.|||
T Consensus       361 i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~i~~~~~~~Gll~~~~~----~~~ir~  436 (461)
T d1ohwa_         361 IKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG----DKSIRF  436 (461)
T ss_dssp             HHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEET----TTEEEC
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeeeeEEEEEEcCCHHHHHHHHHHHHHCCeEEeeCC----CCEEEE
Confidence               23333333333333334433333443 2332345677888998755556788899999999998865    478999


Q ss_pred             Eec---ChhhHHHHHHHHh
Q 014492          405 SVG---KPEHTDALMECLM  420 (423)
Q Consensus       405 s~~---~~~~~~~l~~al~  420 (423)
                      ...   +.++.+.+.+.++
T Consensus       437 ~PpL~it~~eid~~~~~l~  455 (461)
T d1ohwa_         437 RPTLVFRDHHAHLFLNIFS  455 (461)
T ss_dssp             CCCTTCCHHHHHHHHHHHH
T ss_pred             eCCcCCCHHHHHHHHHHHH
Confidence            865   3444444444443

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.40  E-value=8.2e-13  Score=124.84  Aligned_cols=310  Identities=11%  Similarity=0.004  Sum_probs=174.9

Q ss_pred             eeEcCCCCCCCCCCHHHHHHHhcC-CC-----------CCCCCCc--chHHHHHHHHHHhCCCCC-cEEEeCCHHHHHHH
Q 014492           97 IVKIDANENPYGPPPEVREALGQL-KF-----------PYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDL  161 (423)
Q Consensus        97 ~i~l~~~~~~~~~~~~v~~al~~~-~~-----------~~~Y~~~--g~~~lr~~ia~~~g~~~~-~i~~t~G~~~al~~  161 (423)
                      +.+|+.  .|...|++|++++.+. ..           +|+-+..  -..+.|+.++++++.+.+ .|++++|++++...
T Consensus         4 ~~nF~p--GP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~~   81 (360)
T d1w23a_           4 VFNFNA--GPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFT   81 (360)
T ss_dssp             CEECCS--SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred             eeEeCC--CCcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence            344655  4445579999999872 11           1221211  146799999999998655 68899998877766


Q ss_pred             HHHH-hcCCCCeEEEcCCCch--hhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCHH
Q 014492          162 IMRC-VLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE  238 (423)
Q Consensus       162 ~~~~-l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~  238 (423)
                      +... +..+++.+++....+.  .+...++..+...+....+.....+++.++....  ..+..   +..|.||.+.+.+
T Consensus        82 ~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~tg~~~~~~  156 (360)
T d1w23a_          82 MLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEFQL--NENDA---YLHITSNNTIYGT  156 (360)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGCCC--CTTEE---EEEEESEETTTTE
T ss_pred             HHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccccccchhhhhhccc--ccccc---eeEecCCccccce
Confidence            5554 4556777776655443  4445556677666666543332333444444432  22333   3457789999999


Q ss_pred             HHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhcccCccccccccCHHHHH------------HH
Q 014492          239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE------------YL  305 (423)
Q Consensus       239 ~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~G~R~G~i~~~~~~~~------------~l  305 (423)
                      ++.++++. |+++|+|.+.+.....-.    ++..+  +.+.+++|..+++|. .|+++..+...+            ..
T Consensus       157 ~i~~~~~~~g~l~ivDavqs~g~~~id----~~~~~--vd~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (360)
T d1w23a_         157 QYQNFPEINHAPLIADMSSDILSRPLK----VNQFG--MIYAGAQKNLGPSGV-TVVIVKKDLLNTKVEQVPTMLQYATH  229 (360)
T ss_dssp             ECSSCCCCCSSCEEEECTTTTTSSCCC----GGGCS--EEEEETTTTTSCTTC-EEEEEEHHHHCSCCTTCCGGGCHHHH
T ss_pred             eeeeccccceeeEEeeccccccccccc----ccccc--ceEEeeccccccCCc-ceeeEechhhhcccccCCcchhhhhh
Confidence            99999988 999999999985443211    22344  444556666655442 344443222111            11


Q ss_pred             HHhcC-CCCCcHHHHHHHHHHh---CChHHHHHHHHHHHHHHHHHHHHHccCCCCee---cC-C-CceEEEEEeCCCCCH
Q 014492          306 WRAKQ-PYNVSVAAEVAACAAL---QNPIYLEKVKEALIKERERLFKLLKDVPFLNP---YP-S-YSNFILCEVTSGMDA  376 (423)
Q Consensus       306 ~~~~~-~~~~~~~~~~a~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---~p-~-~~~~~~~~~~~~~~~  376 (423)
                      .+... ..........+....+   ..........++.+..................   .+ . ...-+.+.++++.+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~  309 (360)
T d1w23a_         230 IKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELN  309 (360)
T ss_dssp             HHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHH
T ss_pred             hhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEEEEEcCCCccH
Confidence            11111 1222222222221111   11122233333334444444444433322221   11 1 123466788777777


Q ss_pred             HHHHHHHHhCCcEEEeCCCCCCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          377 KKLKDDLAKMGVMIRHYNNKELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       377 ~~l~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      +++...|.++||.++.|...  -+.+|||+-   +.++.++|.+.++++
T Consensus       310 ~~~~~~l~~~GI~~~~G~~~--~ggiRiS~~~~~t~e~V~~Li~~~~~~  356 (360)
T d1w23a_         310 QQFLAKAKEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQF  356 (360)
T ss_dssp             HHHHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCeeeeCCCc--cCcEEEEeeCCCCHHHHHHHHHHHHHH
Confidence            89999999999998776432  235999962   567888888888765

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.27  E-value=4.7e-10  Score=107.10  Aligned_cols=276  Identities=18%  Similarity=0.174  Sum_probs=176.5

Q ss_pred             HHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCeEEEcCCCchhhH----HHHHHCCCeEEEecCCCCCCCCH
Q 014492          133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNV  207 (423)
Q Consensus       133 ~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~  207 (423)
                      ++.+.+++..|.+.-+.-+-.|++.....++.+.. ...+++++..-.++.+.    ..++..|.+++.+|.+++ ..+.
T Consensus       112 e~q~~l~eltGmd~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~-~~~~  190 (437)
T d1wyua1         112 EYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGG-RTPL  190 (437)
T ss_dssp             HHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTT-BCCC
T ss_pred             HHHHHHHHhhCCCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEeeecccc-cchh
Confidence            78899999999876677777888877766655432 23477888888886443    345668999999997544 2222


Q ss_pred             HHHHHHhhcCCceEEEEcCCCCCcCcCCCHHHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhc
Q 014492          208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG  286 (423)
Q Consensus       208 ~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g  286 (423)
                      ++    +. +++.+|++++||. .|.+-+.+++.++++. |.+++.|..-..+.....    ....+.+|++++ +|.||
T Consensus       191 ~~----~~-~~~Aavmi~~Pnt-~G~~ed~~~i~~~~h~~G~l~~~~ad~~al~~l~~----Pg~~GaDi~~g~-~q~fg  259 (437)
T d1wyua1         191 PE----VG-EEVGAVVVQNPNF-LGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKP----PGAYGADIAVGD-GQSLG  259 (437)
T ss_dssp             CC----CC-TTEEEEEEESSCT-TSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCC----HHHHTCSEEEEE-CTTTT
T ss_pred             hh----hc-cceeEEEEccccc-cccccchHHHHHHhhhccceEEeeechhhhhcccc----ccccccceEeec-cceec
Confidence            22    33 6899999999977 7999888888888887 777666643221111111    112233466666 55444


Q ss_pred             cc----CccccccccCHHHHHHH----------------------------HHhcCC---CCCcHHHHHHHHHHh--CCh
Q 014492          287 LA----GLRVGYGAFPLSIIEYL----------------------------WRAKQP---YNVSVAAEVAACAAL--QNP  329 (423)
Q Consensus       287 ~~----G~R~G~i~~~~~~~~~l----------------------------~~~~~~---~~~~~~~~~a~~~~l--~~~  329 (423)
                      .|    |--.|++.+.+++.+.+                            ++.+..   .+-+.+....+..++  ..+
T Consensus       260 ~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~  339 (437)
T d1wyua1         260 LPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGP  339 (437)
T ss_dssp             CCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHHHHHhhhcCc
Confidence            32    33357777766655432                            122221   122223222222222  235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EEEEeCCCCCHHHHHHHHHhCCcEEEe-CCCCCCCCeEEEEe
Q 014492          330 IYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--ILCEVTSGMDAKKLKDDLAKMGVMIRH-YNNKELKGYVRVSV  406 (423)
Q Consensus       330 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~~~~~~~~~~~~l~~~L~~~gI~v~~-~~~~~~~~~iRis~  406 (423)
                      +.+++..++...+.+++.+.|.+++++.+......|  +.+++  +.+..++.++|.++|+.... ......++.+.|++
T Consensus       340 ~GL~~ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~--~~~~~~i~k~L~d~G~~~~~~~~~~~~~~~lli~~  417 (437)
T d1wyua1         340 EGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALAL--PKDPEAVRRALAERGFHGATPVPREYGENLALFAA  417 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEEC--SSCHHHHHHHHHHTTCCCCEECCTTSCSSEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCCeeccCCCCeeeEEEEEC--CCCHHHHHHHHHhCCCCCCcccccCCCCCeEEEec
Confidence            678999999999999999999998777654444443  34555  46789999999999985422 11123368899998


Q ss_pred             c---ChhhHHHHHHHHhhh
Q 014492          407 G---KPEHTDALMECLMHL  422 (423)
Q Consensus       407 ~---~~~~~~~l~~al~~l  422 (423)
                      +   +.+++|+|.++++++
T Consensus       418 TE~~tkeeiD~~v~al~ei  436 (437)
T d1wyua1         418 TELHEEEDLLALREALKEV  436 (437)
T ss_dssp             CTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHh
Confidence            6   466777777777664

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.15  E-value=8.5e-09  Score=99.46  Aligned_cols=321  Identities=17%  Similarity=0.121  Sum_probs=197.6

Q ss_pred             CCeeEcCCCCCCCCCCHHHHHHHhcC-CCCCCC-C-C--cc----hHHHHHHHHHHhCCCCCcEEEeCCHHHHHHHHHHH
Q 014492           95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIY-P-D--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC  165 (423)
Q Consensus        95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Y-~-~--~g----~~~lr~~ia~~~g~~~~~i~~t~G~~~al~~~~~~  165 (423)
                      ..++-++.+...+  .|.+.+.+... ...+-| | .  .|    .-++...|+++.|.+--+.-+-.|++.+.+.++.+
T Consensus        65 ~~~~~lG~~~~hy--~P~v~~~~~~~~TaYTPYQPaEiSQG~LQalfEfQtmi~eLTGMdvaNaS~yDGatA~aeA~~ma  142 (471)
T d1wyub1          65 TTFYPLGSCTMKY--NPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILII  142 (471)
T ss_dssp             TSCCCBTTTCCCC--CCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHH
T ss_pred             ccccCCccccCcc--CcchhhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHH
Confidence            3455566554434  45666666542 111345 3 1  23    23788999999998755555666776554444332


Q ss_pred             h---cCCC----CeEEEcCCCc-hhhHHHHHHCCCeEEEecCCCCCCCCHHHHHHHhhcCCceEEEEcCCCCCcCcCCCH
Q 014492          166 V---LDPG----DKIVDCPPTF-TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND  237 (423)
Q Consensus       166 l---~~~g----d~Vl~~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~i~l~~p~NPtG~~~~~  237 (423)
                      .   .+.+    ..+++..+.+ ..+.......+..++.++.+.....|.+.+..... .++.++++.+|++.-+..-..
T Consensus       143 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~v~v~~p~~~g~~e~~~  221 (471)
T d1wyub1         143 RAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-PHVAALMLTNPNTLGLFERRI  221 (471)
T ss_dssp             HHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-TTEEEEEECSSCTTSCCCTTH
T ss_pred             HHHhhhcccccccccccCCcccccceeeeeecccceeecccccccccccchhhhhhhh-ccccceeeccCCCcccccchh
Confidence            2   1222    2344444444 45555566688899999977777889999998876 678899999999876555567


Q ss_pred             HHHHHHHcC-CCEEEEccCCccccCCCchhhhhccCCcEEEEccChhhhccc----CccccccccCHHHHHHHHHh----
Q 014492          238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYLWRA----  308 (423)
Q Consensus       238 ~~l~~i~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~----  308 (423)
                      +++.++++. +..+++|-+-...........  ..... +++....+.||.|    |--+|++...+++++.+--.    
T Consensus       222 ~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p~--~~g~d-iv~vg~~q~~G~P~~~GGP~~G~~a~~~~~~R~~PGRiV~~  298 (471)
T d1wyub1         222 LEISRLCKEAGVQLYYDGANLNAIMGWARPG--DMGFD-VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVER  298 (471)
T ss_dssp             HHHHHHHHHHTCEEEEEGGGGGGTTTTCCHH--HHTCS-EEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEE
T ss_pred             hhhHHHHHhccccccccccchhhhhhccccC--ccccc-ccccccccccccccccccccccceeehhhhhccCCCceecC
Confidence            788888776 777777765433322111111  11222 4444556666543    44478888888777654200    


Q ss_pred             ---------------cCC--CCCcHHHHHHHH--HHhCChHHHHHHHHHHHHHHHHHHHHHccCCCCeecCCCceE--EE
Q 014492          309 ---------------KQP--YNVSVAAEVAAC--AALQNPIYLEKVKEALIKERERLFKLLKDVPFLNPYPSYSNF--IL  367 (423)
Q Consensus       309 ---------------~~~--~~~~~~~~~a~~--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~~~~--~~  367 (423)
                                     ++.  .+-+.+...++.  ..+..++.++++.+....+..++.+.|+..+ +.+...+.+|  +.
T Consensus       299 ~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~~G-~~~~~~~~ff~EFv  377 (471)
T d1wyub1         299 GEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEFV  377 (471)
T ss_dssp             CSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCEE
T ss_pred             CCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhhcC-ceeccCcceeeEEe
Confidence                           000  112233332232  2222367799999999999999999997754 4443333332  45


Q ss_pred             EEeCCCCCHHHHHHHHHhCCcEEEeCCCC-CCCCeEEEEec---ChhhHHHHHHHHhhh
Q 014492          368 CEVTSGMDAKKLKDDLAKMGVMIRHYNNK-ELKGYVRVSVG---KPEHTDALMECLMHL  422 (423)
Q Consensus       368 ~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~iRis~~---~~~~~~~l~~al~~l  422 (423)
                      ++++.+.+..++.++|.++|+.--....+ ..++++-|+++   +.+++|.|.++|+++
T Consensus       378 v~~~~~~~~~~i~k~L~~~G~~~~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~~i  436 (471)
T d1wyub1         378 AQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGAL  436 (471)
T ss_dssp             EBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             ecCCCCCCHHHHHHHHHHcCCCCCcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Confidence            67777888999999999999854222222 24678899985   677788888888765