Citrus Sinensis ID: 014540

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420---
Protein Sequence
MVEDKCITESEKKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHISGSISSLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNATTSPLSGSICGSNSPVREGLGTEEAEKVASLDMVS
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHcEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccHHcccccccccHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEEEHccHcccccccHHHHcHEEEEccHHccccccccccccccccccccccccHHHccccccccccccccHHHccccccccccccccccccccccccccccccccccccccHHccccccHEEEccccEcc
Coil and Loop (DISEMBL)
mvedkcitesekKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLpifllpglsaLAYSAFVSFnrmcdrkdQKTLERLRVERKAKIDELKERTNYYTTQQLiqrydpdpaAKAAAATVLASKlgadsglnvfvgdesnfnvplgnsndvevmpssglrnrkqlqprsggagstplhhsdeetsssfgsegpehnqlvvnhhypqvstmhdgGWIARIAAILvgddpsqsyalicgnchmhnglarkedfpyityycphcnalnrpkeseghisgsisslppkeleelvsgsisnpplkvseehvadcsssspnmstltadsvnnattsplsgsicgsnspvreglgteeAEKVASLDMVS
Flexible Loop (DISEMBL)
mvedkcitesekkdskavekkrkgiisrlwngifrlkgdDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVErkakidelkertnyyttqqLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHISGSISSLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNATtsplsgsicgsnspvreglgteeaekvasldmvs
Low Complexity Region (SEG)
MVEDKCITESEKKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPaakaaaatvlasklgaDSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKeseghisgsissLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNATTSPLSGSICGSNSPVREGLGTEEAEKVASLDMVS
Disordered region (IsUnstruct)
***********************GIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVE*KAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNF********************************************************LVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNAL**************************************************************************************************
Disordered Region (DISOPRED)
*************************ISRLWNGIFRLKGDDFEKRLQYISKEE***************RMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLE*****************NYYTTQQLI****************************************************************************************************************ARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNA***************************************************************************************************
Disordered Region (DISEMBL)
*********************RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRK*****************************PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRP***********SSLPPKELEELVSGSISNPPLKV**************MSTLTADSVNNATTSPLSGSICGSNSPVREGLGTEEAEKVASLDMVS
Disordered Region (DISPRO)
*********************RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPD**********************************************************************************************PQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNR****************************************************************************************V*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEDKCITESEKKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDxxxxxxxxxxxxxxxxxxxxxTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHISGSISSLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNATTSPLSGSICGSNSPVREGLGTEEAEKVASLDMVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	423	2.2.26 [Sep-21-2011]
Q9ZQ34	408	Uncharacterized protein A	no	no	0.810	0.840	0.623	1e-118
Q1KKR9	358	Protein lunapark-B OS=Tak	N/A	no	0.527	0.622	0.280	6e-17
Q6PFM4	402	Protein lunapark-B OS=Dan	yes	no	0.527	0.554	0.267	4e-16
Q7TQ95	425	Protein lunapark OS=Mus m	yes	no	0.624	0.621	0.239	5e-15
Q5R891	428	Protein lunapark OS=Pongo	yes	no	0.595	0.588	0.245	8e-15
Q9C0E8	428	Protein lunapark OS=Homo	yes	no	0.647	0.640	0.236	2e-14
Q28HF6	423	Protein lunapark OS=Xenop	yes	no	0.524	0.524	0.266	2e-12
Q6DFJ8	440	Protein lunapark OS=Xenop	N/A	no	0.472	0.454	0.272	4e-12
Q7ZU80	393	Protein lunapark-A OS=Dan	no	no	0.120	0.129	0.5	4e-09
Q1KKT4	348	Protein lunapark-A OS=Tak	N/A	no	0.430	0.522	0.239	3e-08

>sp|Q9ZQ34|Y2433_ARATH Uncharacterized protein At2g24330 OS=Arabidopsis thaliana GN=At2g24330 PE=2 SV=1

 Score =  425 bits (1092), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/359 (62%), Positives = 261/359 (72%), Gaps = 16/359 (4%)

Query: 11  EKKDSKAV-----EKK---RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRR 62
           EK DS  V     EKK   RKG+ SRLWN IFR++GDDFEKRL+ ISKEEA +  R+KRR
Sbjct: 18  EKNDSAVVLSASGEKKTTKRKGLFSRLWNAIFRVRGDDFEKRLKNISKEEATVRNRMKRR 77

Query: 63  SQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSA 122
           S T R   R+LI F+V FEVIAV YAIMTTR  +L+WK R+ ++LP+FLLP ++ L YS+
Sbjct: 78  SITRRNFIRNLIAFSVFFEVIAVSYAIMTTRDEDLDWKLRSFRILPMFLLPAVAFLLYSS 137

Query: 123 FVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVL 182
            V F RMCDR+DQ TLE+L+ E   KI+ELKERTNYY TQQLIQRYDPDPAAKAAAATVL
Sbjct: 138 LVGFWRMCDRRDQHTLEKLQAEMLGKINELKERTNYYITQQLIQRYDPDPAAKAAAATVL 197

Query: 183 ASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSD 242
           ASKLGA+SGL VFVGDES      G +N      S GLRNRKQ   R   A +TP+HHSD
Sbjct: 198 ASKLGAESGLKVFVGDESQLEPTAGKNN---AKHSGGLRNRKQTNTRGNSAETTPIHHSD 254

Query: 243 EETSSSFGSE---GPEHNQLVVNHHY-PQVSTMHDGGWIARIAAILVGDDPSQSYALICG 298
            E++ S  SE   G E NQ +V  HY PQ    HDG WI+RIAA+LVG+DPSQSYALICG
Sbjct: 255 NESNHSGTSERITGTEQNQQMVFEHYNPQEYAAHDGSWISRIAALLVGEDPSQSYALICG 314

Query: 299 NCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGH-ISGSISSLPPKELEELVSGSIS 356
           NC MHNGLARKEDFPYITYYCPHC ALN+PK SE H +     +LP   L+ + S  I+
Sbjct: 315 NCRMHNGLARKEDFPYITYYCPHCRALNKPKHSEEHSLIAPADTLPKVSLKPMESEVIN 373

Arabidopsis thaliana (taxid: 3702)

>sp|Q1KKR9|LNPB_TAKRU Protein lunapark-B OS=Takifugu rubripes GN=lnpb PE=3 SV=1

 Score = 89.0 bits (219), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 19/242 (7%)

Query: 98  NWKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERT 156
            W  R    LP F+ P L        +  F++  +R + K LE L+  +K  ++E+ E  
Sbjct: 69  QWLLRLAMALPFFIYPVLVWFIRRFLIFLFSKRSERNNDK-LEDLKATKKKILEEVMETE 127

Query: 157 NYYTTQQLIQRYDPDPAAKAA-AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDV--- 212
            Y   + +++R+DPD   K    AT +  ++   +G  +     +  ++P+G    V   
Sbjct: 128 TYKNAKAILERFDPDAKKKPELEATPVRPQMTPGAGQELRQRGVALRHMPMGTPVAVTPG 187

Query: 213 ---EVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYP--- 266
               + P      R  L    G    + L  S + T  S GS  P      V  H P   
Sbjct: 188 ARPPLGPGGTPVERVPLSAPGGPPERSGLAASVQMTPRSLGSPVPG-----VGMHPPGPP 242

Query: 267 --QVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNA 324
             +     D G + R+   LVGD P   YALIC  C  HNG+A KE+F Y+ + C +C  
Sbjct: 243 LARPVLPKDRGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYLAFRCAYCYF 302

Query: 325 LN 326
           LN
Sbjct: 303 LN 304

Takifugu rubripes (taxid: 31033)

>sp|Q6PFM4|LNPB_DANRE Protein lunapark-B OS=Danio rerio GN=lnpb PE=2 SV=2

 Score = 86.3 bits (212), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 20/243 (8%)

Query: 98  NWKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERT 156
            W  R +  LP+   P L  L     +  F++  +R + K LE L+ +++  ++E+ E  
Sbjct: 69  QWGARLITALPLLAFPALVLLLRKMLIFLFSKRTERNNDK-LEDLKTQKRKILEEVMETE 127

Query: 157 NYYTTQQLIQRYDPDPAAKAAA-ATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVM 215
            Y   + +++R+DP+   KA A AT +   +    G  +        ++ +     V   
Sbjct: 128 TYKNAKLILERFDPESKKKAEAEATPVRPHMTPRPGQEL-----RQRHIAMATPGPVLGP 182

Query: 216 PSSG---LRNRKQLQPRSG--GAGSTPLHHSDEETSSSFG-------SEGPEHNQLVVNH 263
            S G   LR      P  G  G+ STP   S  ET            S GP         
Sbjct: 183 MSPGTTPLRTAPGGPPEKGLAGSASTPAGASQAETPQQMMRRSMNPYSPGPGSGMRPPGP 242

Query: 264 HYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCN 323
              +     + G + R+   LVGD P   YALIC  C  HNG+A KE+F ++ + C +C 
Sbjct: 243 PLARPILPRERGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEFVAFRCAYCY 302

Query: 324 ALN 326
            +N
Sbjct: 303 FMN 305

Danio rerio (taxid: 7955)

>sp|Q7TQ95|LNP_MOUSE Protein lunapark OS=Mus musculus GN=Lnp PE=1 SV=1

 Score = 82.8 bits (203), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 37/301 (12%)

Query: 45  LQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
           L+ I KE  A L   + ++Q  +++    LII++ +  +      I+    +   +  R 
Sbjct: 18  LENIDKEIQA-LEEFREKNQRLQKLWVGRLIIYSSILYLFTC--LIVYLWYLPDEFTARL 74

Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
           +  LP F  P +     +  + F      ++ + L+ L+ ++K  ++E+ E+  Y T + 
Sbjct: 75  VMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKILEEVMEKETYKTAKL 134

Query: 164 LIQRYDPD--------PAAKAAAATV-----LASKLGADSGLNVFVGDESNFNVPLGN-- 208
           +++R+DPD        P +  AA T      +  +  A   L+      S    P G   
Sbjct: 135 ILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPAPASSSQGPPPQGPVS 194

Query: 209 ---SNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHY 265
              + D         R      PR  G+ +T +              GP   + ++    
Sbjct: 195 PGPAKDASAPGGPPERTVAPALPRRLGSPATSV------PGMGLHPPGPPLARPILPR-- 246

Query: 266 PQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNAL 325
                  + G + RI   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  L
Sbjct: 247 -------ERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL 299

Query: 326 N 326
           N
Sbjct: 300 N 300

May be involved in limb and central nervous system development.

Mus musculus (taxid: 10090)

>sp|Q5R891|LNP_PONAB Protein lunapark OS=Pongo abelii GN=LNP PE=2 SV=1

 Score = 82.0 bits (201), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 123/318 (38%), Gaps = 66/318 (20%)

Query: 45  LQYISKEEAAILARVKRRSQTWRRMSR-HLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
           L+ I KE  A L   + ++Q  +++    LI+++ V  +      I+    +   +  R 
Sbjct: 18  LESIDKEIQA-LEEFREKNQRLQKLRVGRLILYSSVLYLFTC--LIVYLWYLPDEFTARL 74

Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
              LP F  P +     +  + F      ++ + L+ L+ +RK  ++E+ E+  Y T + 
Sbjct: 75  AMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKL 134

Query: 164 LIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNR 223
           +++R+DPD  +K A      S  GA                       V   P   +R R
Sbjct: 135 ILERFDPD--SKKAKECEPPSAGGA-----------------------VTARPGQEIRQR 169

Query: 224 KQLQ---------PRSGGAGSTPLHHSDEETSSSFGSEGPEHNQL-------VVNHHYPQ 267
              Q         P  G     P+     + SS+ G  GP    +       V+  H   
Sbjct: 170 TAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPG--GPPERTVTPALSSNVLPRHLGS 227

Query: 268 VSTMHDG-------------------GWIARIAAILVGDDPSQSYALICGNCHMHNGLAR 308
            +T   G                   G + RI   LVGD P   YALIC  C  HNG+A 
Sbjct: 228 PATSVPGMGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMAL 287

Query: 309 KEDFPYITYYCPHCNALN 326
           KE+F YI + C +C  LN
Sbjct: 288 KEEFEYIAFRCAYCFFLN 305

May be involved in limb and central nervous system development.

Pongo abelii (taxid: 9601)

>sp|Q9C0E8|LNP_HUMAN Protein lunapark OS=Homo sapiens GN=LNP PE=1 SV=2

 Score = 80.9 bits (198), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 22/296 (7%)

Query: 45  LQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
           L+ I KE  A L   + ++Q  +++    LI+++ V  +      I+    +   +  R 
Sbjct: 18  LESIDKEIQA-LEEFREKNQRLQKLWVGRLILYSSVLYLFTC--LIVYLWYLPDEFTARL 74

Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
              LP F  P +     +  + F      ++ + L+ L+ +RK  ++E+ E+  Y T + 
Sbjct: 75  AMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKL 134

Query: 164 LIQRYDPD-PAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRN 222
           +++R+DPD   AK        + + A  G  +     +  N+     +     P+ G   
Sbjct: 135 ILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNL-----SPTPASPNQGPPP 189

Query: 223 RKQLQPRSGGAGSTPLHHSDEETSSSFGSE-------GPEHNQLVVNHHYPQVSTMH--- 272
           +  + P      S P    +   + +  S         P  +   +  H P         
Sbjct: 190 QVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPIL 249

Query: 273 --DGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
             + G + RI   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN
Sbjct: 250 PRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLN 305

May be involved in limb and central nervous system development.

Homo sapiens (taxid: 9606)

>sp|Q28HF6|LNP_XENTR Protein lunapark OS=Xenopus tropicalis GN=lnp PE=2 SV=1

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 18/240 (7%)

Query: 102 RALQVLPIFLLPGLSALAYSAFV-SFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYT 160
           R L +L     P L     +  +  F+R  +R +   LE L+ E+K  ++E+ E+  Y  
Sbjct: 73  RLLTMLLFLSFPVLIWFVRTLLILWFSRRTERNN-DALELLKTEKKKILEEVMEKETYKA 131

Query: 161 TQQLIQRYDPDP-AAKAAAATVLASKLGADSG--LNVFVGDESNFNV--PLGNSNDVEVM 215
            + +++R+DPD    K     V    +    G  L      + N +V  P+    +   +
Sbjct: 132 AKLILERFDPDSRKIKELELPVPGPPITPRPGQDLRQRTAAQRNISVSTPVNPGQESPQV 191

Query: 216 PSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSS------FGSEGPEHNQLVVNHHYPQVS 269
           P  GL        R   A   P   S + T  S       GS     + + ++   P ++
Sbjct: 192 P--GLLAATPSLQRDTSAPGGPPERSVQPTPQSNILQRRPGSPATTVSGMAIHPPGPPLA 249

Query: 270 ---TMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
                 + G + R+   LVGD P   YALIC  C  HNG+A KE+F Y+ + C +C  LN
Sbjct: 250 RPILPRERGAMDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYVAFRCAYCYFLN 309

Xenopus tropicalis (taxid: 8364)

>sp|Q6DFJ8|LNP_XENLA Protein lunapark OS=Xenopus laevis GN=lnp PE=2 SV=1

 Score = 72.8 bits (177), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 13/213 (6%)

Query: 126 FNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDP-AAKAAAATVLAS 184
           F+R  +R +   LE L+ E+K  ++E+ E+  Y   + +++R+DPD    K     V   
Sbjct: 98  FSRRTERNN-DALELLKAEKKKILEEVMEKETYKAAKIILERFDPDSRKIKELELPVPGP 156

Query: 185 KLGADSGLNVFVGDESNFNVPLGNS-NDVEVMPS-SGLRNRKQLQPRSGGAGSTPLHHSD 242
            +    G ++     +  N+ +    N  +  P  SGL        R   A   P   S 
Sbjct: 157 PITPRPGQDLRQRTAAQRNISVSTPVNPGQGSPQVSGLLAATPALQRDTSAPGGPPERSV 216

Query: 243 EETSSS------FGSEGPEHNQLVVNHHYPQVS---TMHDGGWIARIAAILVGDDPSQSY 293
           + T  S       GS     + + ++   P ++      + G + R+   LVGD P   Y
Sbjct: 217 QPTPQSNILQRRPGSPATAVSGMALHPPGPPLARPILPRERGAMDRVIEYLVGDGPQNRY 276

Query: 294 ALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
           ALIC  C  HNG+A KE+F Y+ + C +C  LN
Sbjct: 277 ALICQQCFSHNGMALKEEFEYVAFRCAYCYFLN 309

Xenopus laevis (taxid: 8355)

>sp|Q7ZU80|LNPA_DANRE Protein lunapark-A OS=Danio rerio GN=lnpa PE=2 SV=1

 Score = 63.2 bits (152), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 32/52 (61%)

Query: 275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
           G + R+   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN
Sbjct: 247 GAVDRVIEYLVGDGPQNRYALICQQCLSHNGMALKEEFEYIAFRCAYCYFLN 298

Danio rerio (taxid: 7955)

>sp|Q1KKT4|LNPA_TAKRU Protein lunapark-A OS=Takifugu rubripes GN=lnpa PE=3 SV=1

 Score = 60.1 bits (144), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 48/230 (20%)

Query: 126 FNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAA-ATVLAS 184
           F R  ++ + K LE L+ +++  ++++ E   Y   + +++R+DP+   K    +T +  
Sbjct: 96  FARRTEKNNFK-LEDLKAQKRKILEDVMETETYKNAKLILERFDPESKKKTDFDSTPVGP 154

Query: 185 KLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDE- 243
           ++    G              L + N V   P + + +       SG A   PL      
Sbjct: 155 QMTPKPGQE------------LRHRNVVPQTPPASVNSA------SGAAARPPLASGPAY 196

Query: 244 --ETSSSFGSEGPEHNQLVVNHH-------------YPQVSTMHDG------------GW 276
              +S S     PE N L +                 P V     G            G 
Sbjct: 197 PGRSSHSAPGGPPERNLLAIAAQQSLMRKFVTPGTPIPGVGLHPPGPPLARPVLPRERGV 256

Query: 277 IARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
           + R+   LVGD P    AL+C  C  HNG+A KE+F Y+ + C +C  LN
Sbjct: 257 LDRLIEYLVGDGPQNRLALVCQQCLSHNGMALKEEFEYVAFRCAYCYFLN 306

Takifugu rubripes (taxid: 31033)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
255574191	398	conserved hypothetical protein [Ricinus	0.808	0.859	0.755	1e-151
225427520	429	PREDICTED: uncharacterized protein At2g2	0.919	0.906	0.650	1e-139
449437084	401	PREDICTED: uncharacterized protein At2g2	0.815	0.860	0.691	1e-134
449533006	352	PREDICTED: uncharacterized protein At2g2	0.808	0.971	0.700	1e-133
224121268	349	predicted protein [Populus trichocarpa]	0.787	0.954	0.706	1e-130
357466475	455	Protein lunapark [Medicago truncatula] g	0.978	0.909	0.566	1e-129
297802924	407	hypothetical protein ARALYDRAFT_491637 [	0.747	0.776	0.679	1e-128
145350344	409	uncharacterized protein [Arabidopsis tha	0.749	0.775	0.664	1e-125
51971040	409	putative protein [Arabidopsis thaliana]	0.749	0.775	0.661	1e-125
356561905	401	PREDICTED: uncharacterized protein At2g2	0.763	0.805	0.710	1e-121

>gi|255574191|ref|XP_002528011.1| conserved hypothetical protein [Ricinus communis] gi|223532637|gb|EEF34423.1| conserved hypothetical protein [Ricinus communis]

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/347 (75%), Positives = 297/347 (85%), Gaps = 5/347 (1%)

Query: 1   MVEDKCITESEKKD--SKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILAR 58
           M EDK I E+ K +  S  V+KKRKG +SR+WNGIFRL GDDFEKRLQ ISKEEAA+L+R
Sbjct: 1   MAEDKGIAENNKNEQPSVVVKKKRKGFMSRIWNGIFRLHGDDFEKRLQNISKEEAAVLSR 60

Query: 59  VKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSAL 118
           +K+RS TWR+M+RHLIIF+V+FEVIAV YAIMTTRSM+LNWK RA +VLP+FLLP LS++
Sbjct: 61  MKKRSLTWRKMTRHLIIFSVIFEVIAVCYAIMTTRSMDLNWKMRAFRVLPMFLLPALSSI 120

Query: 119 AYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAA 178
           AYSAFVSF RMCDRKDQKTLERLR ER+AKIDELKE+TNYYTTQQLIQRYDPDPAAKAAA
Sbjct: 121 AYSAFVSFTRMCDRKDQKTLERLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAA 180

Query: 179 ATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPL 238
           ATVLASKLGADSGL V+VGDE+  N P G SNDVE   +SGLRNRKQ+Q RS  AGS+P+
Sbjct: 181 ATVLASKLGADSGLKVYVGDEAKLNTPTGKSNDVEYAQASGLRNRKQVQTRSSSAGSSPV 240

Query: 239 HHSDEETSSSFGSEG---PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYAL 295
           HHS+EE   S  SEG    EHNQLVV HH PQ STMHDGGWIAR+AA+LVG+DP+QSYAL
Sbjct: 241 HHSNEEIICSPQSEGLETSEHNQLVVEHHNPQASTMHDGGWIARLAALLVGEDPTQSYAL 300

Query: 296 ICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHISGSISSL 342
           ICGNC MHNGLARKEDFPYITYYCPHC+ALN+PK+ E   SGS S +
Sbjct: 301 ICGNCRMHNGLARKEDFPYITYYCPHCHALNQPKQLEQRGSGSNSPI 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427520|ref|XP_002264767.1| PREDICTED: uncharacterized protein At2g24330 [Vitis vinifera] gi|296088463|emb|CBI37454.3| unnamed protein product [Vitis vinifera]

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/403 (65%), Positives = 306/403 (75%), Gaps = 14/403 (3%)

Query: 12  KKDSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSR 71
           +KD+   +KKR+GIISR+WNG+FR  GDDFEKRLQ+ISKEEA++LAR+KRRSQ+ R M+R
Sbjct: 19  EKDTGVQKKKRRGIISRIWNGLFRRHGDDFEKRLQHISKEEASVLARMKRRSQSSRTMTR 78

Query: 72  HLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCD 131
           +LI+ +V+ EVIAVGYAIMTTRS++LNWK RA +VLP+FLLPGLS+ AYS  VS  RMCD
Sbjct: 79  NLIVLSVILEVIAVGYAIMTTRSVDLNWKMRAFRVLPMFLLPGLSSAAYSVIVSLTRMCD 138

Query: 132 RKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSG 191
           R+DQKTLERLR ER+AKIDELKERTNYYTTQQLIQRYD DPAAKAAAATVLASKLGA+SG
Sbjct: 139 RRDQKTLERLRAERRAKIDELKERTNYYTTQQLIQRYDTDPAAKAAAATVLASKLGAESG 198

Query: 192 LNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGS 251
           L VFVGDES  +V    SNDVE+  SSGLRNRKQLQ RSG   +  +H S+ E     G 
Sbjct: 199 LKVFVGDESQLDVATAKSNDVELTQSSGLRNRKQLQTRSGNPANPTMHPSEGEMPHQAGV 258

Query: 252 EG---PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLAR 308
           EG     H+QLVV H+  Q    +DGGWIARIAA+LVG+DP+QSYALICGNCHMHNGLAR
Sbjct: 259 EGTGTSGHDQLVVEHYPHQGVARYDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLAR 318

Query: 309 KEDFPYITYYCPHCNALNRPKESEGHISGSISSLP---PKELEELVSGSISNPPLKVS-- 363
           KEDF YITYYCPHCNALNR  + E H SGS S       ++LEE  S S S   +  S  
Sbjct: 319 KEDFAYITYYCPHCNALNRSLQQEEHASGSKSPGAVNLSQQLEEHASASKSPGAVNRSQQ 378

Query: 364 -EEHVADCSSSSPNMSTLTADSVNNATTSPLSGSICGSNSPVR 405
            EEH     S SP     +AD+VNNA   P++ S   S+SPVR
Sbjct: 379 LEEHA--TGSKSPGAG--SADAVNNA-AGPVTDSGRTSSSPVR 416

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437084|ref|XP_004136322.1| PREDICTED: uncharacterized protein At2g24330-like [Cucumis sativus]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/356 (69%), Positives = 286/356 (80%), Gaps = 11/356 (3%)

Query: 1   MVEDKCITESEKKDSKA---VEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILA 57
           M E+K   E EKKDS A    +KK +GI SRLWN IFR++GDDFEKRLQ+ISKEEAA+LA
Sbjct: 1   MAEEKAAGEGEKKDSVADVGRKKKSRGIFSRLWNSIFRVRGDDFEKRLQHISKEEAAVLA 60

Query: 58  RVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSA 117
           R+KRRS TWRRM+R+LIIF+VVFE++AV YAI+TTR+++LNWK RA +VLP+FLLP LS 
Sbjct: 61  RLKRRSLTWRRMARNLIIFSVVFEIVAVCYAIITTRTVDLNWKMRAFRVLPMFLLPALST 120

Query: 118 LAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAA 177
           LAY+AF+SF RMCDRKDQKTLERLR ER+AKIDELKE+TNYY TQQLIQRYDPDPAAKAA
Sbjct: 121 LAYTAFLSFTRMCDRKDQKTLERLRAERQAKIDELKEKTNYYITQQLIQRYDPDPAAKAA 180

Query: 178 AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVE-VMPSSGLRNRKQLQPRSGGAGST 236
           AATVLASK+GADSGL V +GDESN NVP G SNDVE V    GLRNRKQ   RS   GS 
Sbjct: 181 AATVLASKMGADSGLKVRLGDESNPNVPSGKSNDVEFVQAGGGLRNRKQGHSRSSSTGSA 240

Query: 237 PLHHSDEETSSSFGSEGP---EHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSY 293
            LHH +EE      S+ P   EHNQLVV H+ PQ   ++DGGW+ARIAA+LVG+DP+QSY
Sbjct: 241 SLHHIEEEARRPAVSDAPHASEHNQLVVGHYNPQGPAVNDGGWLARIAALLVGEDPTQSY 300

Query: 294 ALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESE----GHISGSISSLPPK 345
           ALICGNCHMHNGL +KEDFP+ITYYCPHC  LNR  +SE    GH S  + S+ P+
Sbjct: 301 ALICGNCHMHNGLVKKEDFPFITYYCPHCRVLNRSNQSEEQVSGHGSPPVGSIKPR 356

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449533006|ref|XP_004173468.1| PREDICTED: uncharacterized protein At2g24330-like [Cucumis sativus]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 246/351 (70%), Positives = 284/351 (80%), Gaps = 9/351 (2%)

Query: 1   MVEDKCITESEKKDSKA---VEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILA 57
           M E+K   E EKKDS A    +KK +GI SRLWN IFR++GDDFEKRLQ+ISKEEAA+LA
Sbjct: 1   MAEEKAAGEGEKKDSVADVGRKKKSRGIFSRLWNSIFRVRGDDFEKRLQHISKEEAAVLA 60

Query: 58  RVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSA 117
           R+KRRS TWRRM+R+LIIF+VVFE++AV YAI+TTR+++LNWK RA +VLP+FLLP LS 
Sbjct: 61  RLKRRSLTWRRMARNLIIFSVVFEIVAVCYAIITTRTVDLNWKMRAFRVLPMFLLPALST 120

Query: 118 LAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAA 177
           LAY+AF+SF RMCDRKDQKTLERLR ER+AKIDELKE+TNYY TQQLIQRYDPDPAAKAA
Sbjct: 121 LAYTAFLSFTRMCDRKDQKTLERLRAERQAKIDELKEKTNYYITQQLIQRYDPDPAAKAA 180

Query: 178 AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVE-VMPSSGLRNRKQLQPRSGGAGST 236
           AATVLASK+GADSGL V +GDESN NVP G SNDVE V    GLRNRKQ   RS   GS 
Sbjct: 181 AATVLASKMGADSGLKVRLGDESNPNVPSGKSNDVEFVQAGGGLRNRKQGHSRSSSTGSA 240

Query: 237 PLHHSDEETSSSFGSEGP---EHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSY 293
            LHH +EE      S+ P   EHNQLVV H+ PQ   ++DGGW+ARIAA+LVG+DP+QSY
Sbjct: 241 SLHHIEEEARRPAVSDAPHASEHNQLVVGHYNPQGPAVNDGGWLARIAALLVGEDPTQSY 300

Query: 294 ALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHISGSISSLPP 344
           ALICGNCHMHNGL +KEDFP+ITYYCPHC  LNR  +SE  +SG  S  PP
Sbjct: 301 ALICGNCHMHNGLVKKEDFPFITYYCPHCRVLNRSNQSEEQVSGHGS--PP 349

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121268|ref|XP_002330785.1| predicted protein [Populus trichocarpa] gi|222872587|gb|EEF09718.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/337 (70%), Positives = 283/337 (83%), Gaps = 4/337 (1%)

Query: 8   TESEKKDSKAVEKKRKG-IISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTW 66
           T+S+   S AV+K+  G I+SR+W  +FR  GDDFEKRLQ+ISKEEAA+L+R+ RRS+  
Sbjct: 11  TDSQDSSSPAVKKRSGGGILSRVWKAVFRPHGDDFEKRLQHISKEEAAVLSRINRRSRNR 70

Query: 67  RRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSF 126
           R+++RHLI+F+V+FEVIAVGYAIMTTRSM++NWK RA ++LP+FLLP LS+LAYSAFVSF
Sbjct: 71  RKITRHLIVFSVLFEVIAVGYAIMTTRSMDMNWKMRAFRILPMFLLPALSSLAYSAFVSF 130

Query: 127 NRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKL 186
            RMCDR+DQKTLERL+ ER+AKIDELKE+TNYY+TQQLIQRYDPDPAAKAAAATVLASKL
Sbjct: 131 TRMCDRRDQKTLERLQAERQAKIDELKEKTNYYSTQQLIQRYDPDPAAKAAAATVLASKL 190

Query: 187 GADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETS 246
           GADSGL V+VGDES   +P G SND E + +SGLRNRKQ+   S  +GST + HSDEE  
Sbjct: 191 GADSGLKVYVGDESKPTLPTGKSNDAEFVQASGLRNRKQVHTTSSSSGSTLVQHSDEEMP 250

Query: 247 SSFGSEGP---EHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMH 303
            S  SEGP   EHNQLV  H+ PQ  T +DGGW+ARIAA+LVG+DP+QSYALICGNCHMH
Sbjct: 251 LSVQSEGPLTSEHNQLVAEHYTPQGYTAYDGGWVARIAALLVGEDPTQSYALICGNCHMH 310

Query: 304 NGLARKEDFPYITYYCPHCNALNRPKESEGHISGSIS 340
           NGLARKEDFPYITYYCPHC ALN+PK+ E  +SGS S
Sbjct: 311 NGLARKEDFPYITYYCPHCRALNQPKQLEERVSGSSS 347

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466475|ref|XP_003603522.1| Protein lunapark [Medicago truncatula] gi|355492570|gb|AES73773.1| Protein lunapark [Medicago truncatula]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/452 (56%), Positives = 325/452 (71%), Gaps = 38/452 (8%)

Query: 1   MVEDKCITESEKKD-------SKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEA 53
           M +DK + E EKK+       S  V+KKRKG ISR+WNGIFRL GDDFEKRL++ISKEEA
Sbjct: 1   MADDKAVEEGEKKETSPTATASGNVKKKRKGFISRIWNGIFRLHGDDFEKRLKHISKEEA 60

Query: 54  AILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLP 113
            ++ARV RRS++ R+ SR+LI+F+V+FEVIAVGYAIMTTRS+ ++WK RA++VLP+FLLP
Sbjct: 61  TVIARVTRRSRSRRQTSRNLIVFSVIFEVIAVGYAIMTTRSVGIDWKMRAIRVLPMFLLP 120

Query: 114 GLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPA 173
            LS+  YSAF++F RMCDR+DQ  LE+LR ER+AKIDELKE+TNYYTTQQLIQRYDPDPA
Sbjct: 121 ALSSAVYSAFITFTRMCDRRDQNILEKLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPA 180

Query: 174 AKAAAATVLASKLGADSGLNVFVGDESNFN-VPLGNSNDVEVMPSSGLRNRKQLQPRSGG 232
           AKAAAATVLASKLGADSG+ +++GDESN +    G SNDVE++ SSGLRNRKQ+Q RS  
Sbjct: 181 AKAAAATVLASKLGADSGMRLYMGDESNLSGASTGKSNDVELVQSSGLRNRKQVQTRSTS 240

Query: 233 AGSTPLHHSDEETSSSFG---SEGPEHNQ-LVVNHHYPQVSTMHDGGWIARIAAILVGDD 288
            G++  + +D++ + S G   ++  E+NQ  VV HH PQ ST  DGGWIARIAA+LVG+D
Sbjct: 241 PGTSTPNFADQQLAGSGGFDQTQTSEYNQHAVVEHHQPQSSTPQDGGWIARIAALLVGED 300

Query: 289 PSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHISGSISSLPPKELE 348
           P+QSYALICGNCHMHNGL RKEDFP+ITYYCPHC+ALN+PK+ +G +SG  S  P     
Sbjct: 301 PTQSYALICGNCHMHNGLVRKEDFPFITYYCPHCHALNKPKQLDGSVSGLAS--PNAGSV 358

Query: 349 ELVSGSISNPPLKVSEEHVADCSSSSP--NMSTLTADSVNNATTSPLSG----------- 395
           ++  G +  P L V    + +  S  P  N+ ++  D   +   SP +G           
Sbjct: 359 QMDEGILGLPSLNVGSVQMDERISGLPSLNVGSVQMDERISGLPSPNAGSPKTGDGEAIL 418

Query: 396 --------SICGSNSPVREGLGTEEAEKVASL 419
                   SI  SN PV     + EAEKV+ +
Sbjct: 419 NANASAAESIITSNGPVN---ASPEAEKVSEM 447

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802924|ref|XP_002869346.1| hypothetical protein ARALYDRAFT_491637 [Arabidopsis lyrata subsp. lyrata] gi|297315182|gb|EFH45605.1| hypothetical protein ARALYDRAFT_491637 [Arabidopsis lyrata subsp. lyrata]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/321 (67%), Positives = 268/321 (83%), Gaps = 5/321 (1%)

Query: 17  AVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIF 76
           +V+KK+KG  SRLWNGIFR++GDDFEKRLQYISKEEA +L+R+KRRS TWR+++R+LI+ 
Sbjct: 31  SVKKKQKGFFSRLWNGIFRVRGDDFEKRLQYISKEEATVLSRMKRRSITWRKLTRNLIVS 90

Query: 77  TVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQK 136
           +V+FE+IAVGYAI+TTR+ +L+W+ R+ ++LP+F+LP +SALAYS+ VSF++M DR+DQK
Sbjct: 91  SVLFEIIAVGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQK 150

Query: 137 TLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFV 196
           TLE+LR ER AKI+ELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGL VF+
Sbjct: 151 TLEKLRAERLAKINELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVFL 210

Query: 197 GDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEE-----TSSSFGS 251
           GDES  +   G SND+EV  S GLRNR+Q   R  G+GST  HHSD+E     TS  F  
Sbjct: 211 GDESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESHHSGTSERFPG 270

Query: 252 EGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKED 311
              ++ Q++V H+ PQ    HDG WI+RIAA+LVG+DP+QSYALICGNC MHNGLARKED
Sbjct: 271 ATEQNQQMLVEHYSPQGYAAHDGSWISRIAALLVGEDPTQSYALICGNCRMHNGLARKED 330

Query: 312 FPYITYYCPHCNALNRPKESE 332
           F YITYYCPHCNALN+PK +E
Sbjct: 331 FAYITYYCPHCNALNKPKHTE 351

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145350344|ref|NP_194837.2| uncharacterized protein [Arabidopsis thaliana] gi|22531219|gb|AAM97113.1| unknown protein [Arabidopsis thaliana] gi|30725690|gb|AAP37867.1| At4g31080 [Arabidopsis thaliana] gi|51969062|dbj|BAD43223.1| putative protein [Arabidopsis thaliana] gi|51969510|dbj|BAD43447.1| putative protein [Arabidopsis thaliana] gi|51971082|dbj|BAD44233.1| putative protein [Arabidopsis thaliana] gi|62320045|dbj|BAD94195.1| putative protein [Arabidopsis thaliana] gi|110740411|dbj|BAF02100.1| hypothetical protein [Arabidopsis thaliana] gi|332660454|gb|AEE85854.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/322 (66%), Positives = 267/322 (82%), Gaps = 5/322 (1%)

Query: 19  EKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTV 78
           +KK+ G  SRLWNGIFR++GDDFEKRLQYIS+EEA +L+R+KRRS +WR+++R+LI+ +V
Sbjct: 35  KKKQNGFFSRLWNGIFRVRGDDFEKRLQYISREEATVLSRMKRRSISWRKLTRNLIVSSV 94

Query: 79  VFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTL 138
           +FE+IAVGYAI+TTR+ +L+W+ R+ ++LP+F+LP +SALAYS+ VSF++M DR+DQKTL
Sbjct: 95  LFEIIAVGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQKTL 154

Query: 139 ERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGD 198
           E+LR ER AKI+ELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGL V++GD
Sbjct: 155 EKLRAERLAKINELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGD 214

Query: 199 ESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEE-----TSSSFGSEG 253
           ES  +   G SND+EV  S GLRNR+Q   R  G+GST  HHSD+E     TS  F    
Sbjct: 215 ESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESHHSGTSERFPGTT 274

Query: 254 PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFP 313
            ++ Q++V H+ PQ    HDG WI+RIAA+LVG+DP+QSYALICGNC MHNGLARKEDF 
Sbjct: 275 EQNQQMLVEHYSPQGYAAHDGSWISRIAALLVGEDPTQSYALICGNCRMHNGLARKEDFA 334

Query: 314 YITYYCPHCNALNRPKESEGHI 335
           YITYYCPHCNALN+PK SE ++
Sbjct: 335 YITYYCPHCNALNKPKHSEENV 356

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51971040|dbj|BAD44212.1| putative protein [Arabidopsis thaliana]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/322 (66%), Positives = 267/322 (82%), Gaps = 5/322 (1%)

Query: 19  EKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTV 78
           +KK+ G  SRLWNGIFR++GDDFEKRLQY+S+EEA +L+R+KRRS +WR+++R+LI+ +V
Sbjct: 35  KKKQNGFFSRLWNGIFRVRGDDFEKRLQYVSREEATVLSRMKRRSISWRKLTRNLIVSSV 94

Query: 79  VFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTL 138
           +FE+IAVGYAI+TTR+ +L+W+ R+ ++LP+F+LP +SALAYS+ VSF++M DR+DQKTL
Sbjct: 95  LFEIIAVGYAILTTRTEDLDWRMRSFRILPMFILPAVSALAYSSIVSFSKMFDRRDQKTL 154

Query: 139 ERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGD 198
           E+LR ER AKI+ELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGL V++GD
Sbjct: 155 EKLRAERLAKINELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYLGD 214

Query: 199 ESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEE-----TSSSFGSEG 253
           ES  +   G SND+EV  S GLRNR+Q   R  G+GST  HHSD+E     TS  F    
Sbjct: 215 ESQLDPSSGKSNDMEVNQSRGLRNRRQPNTRPHGSGSTSTHHSDDESHHSGTSERFPGTT 274

Query: 254 PEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFP 313
            ++ Q++V H+ PQ    HDG WI+RIAA+LVG+DP+QSYALICGNC MHNGLARKEDF 
Sbjct: 275 EQNQQMLVEHYSPQGYAAHDGSWISRIAALLVGEDPTQSYALICGNCRMHNGLARKEDFA 334

Query: 314 YITYYCPHCNALNRPKESEGHI 335
           YITYYCPHCNALN+PK SE ++
Sbjct: 335 YITYYCPHCNALNKPKHSEENV 356

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561905|ref|XP_003549217.1| PREDICTED: uncharacterized protein At2g24330-like [Glycine max]

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/328 (71%), Positives = 272/328 (82%), Gaps = 5/328 (1%)

Query: 14  DSKAVEKKRKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHL 73
           DSK  EKK+KG ISR+WN IFR   DDFEKRL+YI+KEE   L R+  RS++WRR SR L
Sbjct: 21  DSKKNEKKKKGFISRIWNAIFRSNRDDFEKRLEYITKEENMALTRLSNRSRSWRRTSRQL 80

Query: 74  IIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRK 133
           I+F+V+FEVIAVGYAIMTTRSM++NWK RA++VLP+FLLP LS+  Y+AFVSF RMCDRK
Sbjct: 81  ILFSVLFEVIAVGYAIMTTRSMDMNWKMRAIRVLPMFLLPALSSATYTAFVSFTRMCDRK 140

Query: 134 DQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLN 193
           DQK LE LR ERKAKIDELKE+TNYY TQQLIQRYD DPAAKAAAATVLASKLGADSGL 
Sbjct: 141 DQKILESLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGLK 200

Query: 194 VFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFG--- 250
           V+VGDES+  V  G + DVEV+ SSGLRNRKQ+  RS   G+T  ++SD++   S     
Sbjct: 201 VYVGDESS-GVSTGKTKDVEVVQSSGLRNRKQVTSRSTSPGTTTPNYSDQQLVGSGKIDQ 259

Query: 251 SEGPEHNQL-VVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARK 309
           ++  EHNQL VV HH PQ STM+DGGWIARIAA+LVG+DP+QSYALICGNCHMHNGLARK
Sbjct: 260 TQTHEHNQLVVVEHHNPQSSTMNDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARK 319

Query: 310 EDFPYITYYCPHCNALNRPKESEGHISG 337
           EDFP+ITYYCPHC+ALN+PK+S+  ISG
Sbjct: 320 EDFPFITYYCPHCHALNKPKQSDERISG 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
TAIR|locus:2061047	408	AT2G24330 "AT2G24330" [Arabido	0.839	0.870	0.556	3.4e-100
UNIPROTKB|F1P4S3	333	KIAA1715 "Uncharacterized prot	0.122	0.156	0.480	6.8e-14
MGI|MGI:1918115	425	Lnp "limb and neural patterns"	0.257	0.256	0.358	9e-14
RGD|1312042	425	Lnp "limb and neural patterns"	0.257	0.256	0.350	1.1e-13
UNIPROTKB|Q9C0E8	428	LNP "Protein lunapark" [Homo s	0.321	0.317	0.300	1.2e-13
UNIPROTKB|F1PB16	429	KIAA1715 "Uncharacterized prot	0.302	0.298	0.297	1.4e-13
ZFIN|ZDB-GENE-030131-9455	422	lnpb "limb and neural patterns	0.718	0.720	0.243	1.9e-13
ZFIN|ZDB-GENE-030131-4960	393	lnpa "limb and neural patterns	0.122	0.132	0.5	6e-12
UNIPROTKB|F6RBJ1	429	KIAA1715 "Uncharacterized prot	0.323	0.319	0.307	1.3e-10
DICTYBASE|DDB_G0289961	452	DDB_G0289961 "transmembrane pr	0.122	0.115	0.346	4.4e-10

TAIR|locus:2061047 AT2G24330 "AT2G24330" [Arabidopsis thaliana (taxid:3702)]

 Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
 Identities = 207/372 (55%), Positives = 243/372 (65%)

Query:     7 ITES--EKKDSKAV-----EKK---RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAIL 56
             + ES  EK DS  V     EKK   RKG+ SRLWN IFR++GDDFEKRL+ ISKEEA + 
Sbjct:    12 VVESGGEKNDSAVVLSASGEKKTTKRKGLFSRLWNAIFRVRGDDFEKRLKNISKEEATVR 71

Query:    57 ARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLS 116
              R+KRRS T R   R+LI F+V FEVIAV YAIMTTR  +L+WK R+ ++LP+FLLP ++
Sbjct:    72 NRMKRRSITRRNFIRNLIAFSVFFEVIAVSYAIMTTRDEDLDWKLRSFRILPMFLLPAVA 131

Query:   117 ALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPXXXX 176
              L YS+ V F RMCDR+DQ TLE+L+ E   KI+ELKERTNYY TQQLIQRYDPDP    
Sbjct:   132 FLLYSSLVGFWRMCDRRDQHTLEKLQAEMLGKINELKERTNYYITQQLIQRYDPDPAAKA 191

Query:   177 XXXXXXXXXXXXDSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGST 236
                         +SGL VFVGDES      G +N      S GLRNRKQ   R   A +T
Sbjct:   192 AAATVLASKLGAESGLKVFVGDESQLEPTAGKNN---AKHSGGLRNRKQTNTRGNSAETT 248

Query:   237 PLHHSDEETSSSFGSE---GPEHNQLVVNHHY-PQVSTMHDGGWIARIAAILVGDDPSQS 292
             P+HHSD E++ S  SE   G E NQ +V  HY PQ    HDG WI+RIAA+LVG+DPSQS
Sbjct:   249 PIHHSDNESNHSGTSERITGTEQNQQMVFEHYNPQEYAAHDGSWISRIAALLVGEDPSQS 308

Query:   293 YALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKXXXXXXXXXXXXLPPKELEELVS 352
             YALICGNC MHNGLARKEDFPYITYYCPHC ALN+PK              PK   + + 
Sbjct:   309 YALICGNCRMHNGLARKEDFPYITYYCPHCRALNKPKHSEEHSLIAPADTLPKVSLKPME 368

Query:   353 GSISNPPLKVSE 364
               + N     SE
Sbjct:   369 SEVINSSSSTSE 380

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P4S3 KIAA1715 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 141 (54.7 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
 Identities = 25/52 (48%), Positives = 32/52 (61%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
             G + R+   LVGD P   YALIC  C  HNG+A KE+F Y+ + C +C  LN
Sbjct:   258 GVVDRVIEYLVGDGPQNRYALICQQCCSHNGMALKEEFEYVAFRCAYCFFLN 309

GO:0007596 "blood coagulation" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

MGI|MGI:1918115 Lnp "limb and neural patterns" [Mus musculus (taxid:10090)]

 Score = 150 (57.9 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
 Identities = 42/117 (35%), Positives = 53/117 (45%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKXXXXX 334
             G + RI   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN  +     
Sbjct:   249 GALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQ 308

Query:   335 XXXXXXXLPPKELE--ELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNAT 389
                    LP    E  + V GS S  P  +  E V    S     S    D ++N+T
Sbjct:   309 APR----LPEFSFEKRQAVEGSSSTGPTLL--ESVPSAESQLIEDSLEEQDVLDNST 359

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007596 "blood coagulation" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032330 "regulation of chondrocyte differentiation" evidence=IMP

GO:0035115 "embryonic forelimb morphogenesis" evidence=IMP

GO:0042733 "embryonic digit morphogenesis" evidence=IGI

RGD|1312042 Lnp "limb and neural patterns" [Rattus norvegicus (taxid:10116)]

 Score = 151 (58.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 41/117 (35%), Positives = 54/117 (46%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKXXXXX 334
             G + RI   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN  +     
Sbjct:   249 GALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQ 308

Query:   335 XXXXXXXLPPKELE--ELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNAT 389
                    LP    E  + V GS S  P+ +  E V    +     S    D ++N+T
Sbjct:   309 APR----LPEFSFEKRQAVEGSSSTGPMLL--ESVPSPENQLTEDSLEEQDDLDNST 359

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0007596 "blood coagulation" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0032330 "regulation of chondrocyte differentiation" evidence=ISO

GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO

GO:0042733 "embryonic digit morphogenesis" evidence=ISO

UNIPROTKB|Q9C0E8 LNP "Protein lunapark" [Homo sapiens (taxid:9606)]

 Score = 150 (57.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 43/143 (30%), Positives = 62/143 (43%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKXXXXX 334
             G + RI   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN  +     
Sbjct:   254 GALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQ 313

Query:   335 XXXXXXXLPPKELE--ELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNATTSP 392
                    LP    E  ++V GS S  PL       +D   +  ++     D     T   
Sbjct:   314 APR----LPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLEHDVLDDNTEQTDDK 369

Query:   393 LSGSICGSNSPVREGLGTEEAEK 415
             +  +   +N  + +   +EE E+
Sbjct:   370 IPATE-QTNQVIEKASDSEEPEE 391

GO:0007596 "blood coagulation" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0016021 "integral to membrane" evidence=NAS

GO:0060173 "limb development" evidence=NAS

UNIPROTKB|F1PB16 KIAA1715 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 153 (58.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
 Identities = 41/138 (29%), Positives = 62/138 (44%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN-------- 326
             G + RI   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN        
Sbjct:   254 GALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQ 313

Query:   327 RPKXXXXXXXXXXXXLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVN 386
              P+                 L  L SGS+ +   +++EE V +      N +  T + ++
Sbjct:   314 APRLPEFSFEKRQAVESSSSLGPLPSGSVISSENQITEESVEE-QDVLDNSTEQTEEKIS 372

Query:   387 NAT-TSPLSGSICGSNSP 403
             +   T+  +  + G+  P
Sbjct:   373 DTEQTNQGTEKVSGTEEP 390

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0007596 "blood coagulation" evidence=IEA

ZFIN|ZDB-GENE-030131-9455 lnpb "limb and neural patterns b" [Danio rerio (taxid:7955)]

 Score = 200 (75.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
 Identities = 81/333 (24%), Positives = 127/333 (38%)

Query:    99 WKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERTN 157
             W  R +  LP+   P L  L     +  F++  +R + K LE L+ +++  ++E+ E   
Sbjct:    90 WGARLITALPLLAFPALVLLLRKVLIFLFSKRTERNNDK-LEDLKTQKRKILEEVMETET 148

Query:   158 YYTTQQLIQRYDPDPXXXXXXXXXXXXXXXXDSGLNVFVGDE-SNFNVPLGNSNDVEVMP 216
             Y   + +++R+DP+                         G E    ++ +     V    
Sbjct:   149 YKNAKLILERFDPESKKKAEAEATPVRPHMTPRP-----GQELRQRHIAMATPGPVLGPM 203

Query:   217 SSG---LRNRKQLQPRSG--GAGSTPLHHSDEET-------SSSFGSEGPEHNQLVVNHH 264
             S G   LR      P  G  G+ STP   S  ET       S +  S GP          
Sbjct:   204 SPGTTPLRTAPGGPPEKGLAGSASTPAGASQAETPQQMMRRSMNPYSPGPGSGMRPPGPP 263

Query:   265 YPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNA 324
               +     + G + R+   LVGD P   YALIC  C  HNG+A KE+F ++ + C +C  
Sbjct:   264 LARPILPRERGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEFVAFRCAYCYF 323

Query:   325 LNRPKXXXXXXXXXXXXLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMS-TLTAD 383
             +N  +            LP    E  +           + E   D  +   +M  T +AD
Sbjct:   324 MNPARKTRPQAPR----LPEFSFERRLRSESPETQSSAATETPEDSDAPEDDMERTTSAD 379

Query:   384 SVNNATT-SP-LSGSICGSNSPVREGLGTEEAE 414
               N A   +P L  S    + P  + +  EEAE
Sbjct:   380 PQNPAADEAPVLQESETEESQP--QDVPREEAE 410

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-4960 lnpa "limb and neural patterns a" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
 Identities = 26/52 (50%), Positives = 32/52 (61%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
             G + R+   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN
Sbjct:   247 GAVDRVIEYLVGDGPQNRYALICQQCLSHNGMALKEEFEYIAFRCAYCYFLN 298

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F6RBJ1 KIAA1715 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 157 (60.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
 Identities = 44/143 (30%), Positives = 62/143 (43%)

Query:   275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKXXXXX 334
             G + RI   LVGD P   YALIC  C  HNG+A KE+F YI + C +C  LN  +     
Sbjct:   254 GALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQ 313

Query:   335 XXXXXXXLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVNNAT--TSP 392
                    LP    E+  +  +SN    +  E V    +     S    D ++N+T  T  
Sbjct:   314 APR----LPEFSFEKRQALEVSNTVGSLPSESVISSENQINEESLEEQDVLDNSTEQTDD 369

Query:   393 LSGSICGSNSPVREGLGTEEAEK 415
                    +N  + +  G EE E+
Sbjct:   370 KIPDTEQTNPVIEQASGIEEPEE 392

GO:0042733 "embryonic digit morphogenesis" evidence=IEA

GO:0035115 "embryonic forelimb morphogenesis" evidence=IEA

GO:0007596 "blood coagulation" evidence=IEA

DICTYBASE|DDB_G0289961 DDB_G0289961 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 111 (44.1 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query:   276 WIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNR 327
             W+ ++   L+ D P+    LIC NCH HNG    E+   I + C  C   N+
Sbjct:   297 WLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQ 348

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	423
pfam10058	51	pfam10058, DUF2296, Predicted integral membrane me	3e-26
COG5415	251	COG5415, COG5415, Predicted integral membrane meta	5e-13
COG5415	251	COG5415, COG5415, Predicted integral membrane meta	3e-05

>gnl|CDD|220545 pfam10058, DUF2296, Predicted integral membrane metal-binding protein (DUF2296)

 Score = 99.6 bits (249), Expect = 3e-26
 Identities = 32/51 (62%), Positives = 37/51 (72%)

Query: 276 WIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
           W  R+  +LVGDDP+  YALIC  CH HNGLA KE+F  +TY CPHC ALN
Sbjct: 1   WFDRVLDVLVGDDPNNRYALICSKCHSHNGLAPKEEFEEVTYRCPHCGALN 51

This domain, found in various hypothetical bacterial and eukaryotic metal-binding proteins, has no known function. Length = 51

>gnl|CDD|227702 COG5415, COG5415, Predicted integral membrane metal-binding protein [General function prediction only]

 Score = 68.1 bits (166), Expect = 5e-13
 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 4/83 (4%)

Query: 271 MHDGGWIARIAAILVGDDP---SQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNR 327
                W  ++ ++L G +    S   ALIC  CH HNGL R  + P I + CPHCN  N 
Sbjct: 166 EDSDAWFDKVISVLAGGNELDLSPFKALICPQCHHHNGLYRLAEKPIIEFICPHCNHKND 225

Query: 328 -PKESEGHISGSISSLPPKELEE 349
             KE E        + P +  +E
Sbjct: 226 EVKEREDSNEAKQPAQPSQSEKE 248

Length = 251

>gnl|CDD|227702 COG5415, COG5415, Predicted integral membrane metal-binding protein [General function prediction only]

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 102 RALQVLPIFLLPGLSALAYS-AFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYT 160
           R   V+   LL   S   +  A        + +  + L +LR   + K+++LKE T+Y  
Sbjct: 68  RPYLVITALLLGSGSLYMFRWALTKLYEFRNNRRLRKLAKLRAIHRKKLEKLKEETHYNA 127

Query: 161 TQQLIQRYDPDPAAK 175
           T  +IQ+Y  +  AK
Sbjct: 128 TSSIIQKYSEELNAK 142

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	423
KOG2846	328	consensus Predicted membrane protein [Function unk	100.0
COG5415	251	Predicted integral membrane metal-binding protein	100.0
PF10058	54	DUF2296: Predicted integral membrane metal-binding	99.93
PF10166	131	DUF2368: Uncharacterised conserved protein (DUF236	93.18
COG5415	251	Predicted integral membrane metal-binding protein	91.98
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	89.24
PF04678	180	DUF607: Protein of unknown function, DUF607; Inter	88.09
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	87.81
PF00664	275	ABC_membrane: ABC transporter transmembrane region	87.58
PF10864	130	DUF2663: Protein of unknown function (DUF2663); In	86.62
TIGR00416	454	sms DNA repair protein RadA. The gene protuct code	84.86
PRK11823	446	DNA repair protein RadA; Provisional	84.67
cd01121	372	Sms Sms (bacterial radA) DNA repair protein. This	84.25
PF10122	51	Mu-like_Com: Mu-like prophage protein Com; InterPr	82.63

>KOG2846 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=4.2e-45  Score=360.34  Aligned_cols=259  Identities=31%  Similarity=0.432  Sum_probs=185.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 014540           73 LIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDEL  152 (423)
Q Consensus        73 Li~YS~il~ii~lvY~~~~~~~~~~~w~~r~~~~lp~~l~Pili~li~~~~~~f~r~~~~~~e~kL~~L~~e~kkkIeel  152 (423)
                      ++.|++.+++  |.|.++.+...+..|....++++|+++||+|++++++++.+|+.+.+++++.+|.+|++++.++++++
T Consensus        17 ~~~y~~~~~~--~~~~i~~~~~~~~~~q~~~~~~~p~l~~~~I~~~~~~~~~~y~~~~~~r~~~~lt~L~s~~~~ll~~v   94 (328)
T KOG2846|consen   17 VTKYTSDLYI--FTSQIHQLDYAPEKSQSILSQWQPNLGFPGIILTVRRLSYTYFEYRLNRNTLKLTRLKSQKSKLLELV   94 (328)
T ss_pred             eeehhHHHHH--HHHHHHhhhccCchhHHHHHHHHHHhcchHHHHHHHHHHHhhhheecccchHHHHHHHHHHHHHHHHH
Confidence            3344554433  34555555556778999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccChHHHHHHHHhcCCChhHHHHHHHHHhhhcCCCCCCccccCCCCCCCCCCCCCCCCcCCCCcccccCcCCCCCCCC
Q 014540          153 KERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGG  232 (423)
Q Consensus       153 K~~T~Y~~Tk~LLEKYd~~~~~k~~~~t~~a~k~g~~~~~~~~~~~e~~~~~~~gks~~~~~~~~~~lr~r~q~~~~~~~  232 (423)
                      ++.+.|..++.||+||++++.++..+.|.++.|+|++.+.+....+..+.           ..-+.+.+++.+..++...
T Consensus        95 ~~~~ly~~a~~il~Ry~~~~~a~~~~~t~~~~k~~~~s~~~l~~~~~~r~-----------~~ls~~~~~~r~~~t~~~~  163 (328)
T KOG2846|consen   95 LETKLYKVALNILERYDPDPAAKRAAPTSLAEKLGARSGLNLTKLTAARQ-----------VFLSGGKQNQRQANTLLND  163 (328)
T ss_pred             HHHHHHHHHHHHHHHhcchHHHHhhhhhhhhhhhccccCCchhhhhhhhh-----------hccCccchhhhhccccccc
Confidence            99999999999999999998888888999999999999998877765430           0111222222222222111


Q ss_pred             CCCCCCCCCCCcccCCCCCCCCCCCcccccCCCCCcccCCCCcHHHHHHHHHhcCCCCCcceeeccccccccCccccCCC
Q 014540          233 AGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDF  312 (423)
Q Consensus       233 pg~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~P~~~~~~~r~W~DRIlD~LlGddpt~ryALIC~~C~~HNGlA~~ee~  312 (423)
                      -..++.+.... .+...++    ....+.+-.++....+++++|||||+|+||||||++||||||++||.|||||++|||
T Consensus       164 e~nt~~~s~~~-~k~~~~s----~~~~vpg~~~~~~~~~r~~~a~DRI~d~lvGdsP~~ryALIC~~C~~HNGla~~ee~  238 (328)
T KOG2846|consen  164 ELNTEAHSLNN-LKYHLES----ASKSVPGKSLFEHYKPRSRAAFDRILDYLVGDSPNNRYALICSQCHHHNGLARKEEY  238 (328)
T ss_pred             ccccccccccc-chhhhhc----ccccCCCcCccccCCcchhhHHHHHHHHHhcCCCcchhhhcchhhccccCcCChhhc
Confidence            11111111111 1000000    000000001112235678999999999999999999999999999999999999999


Q ss_pred             CceEEEcCCCCCccCCCCCCCCCCCCCCCCCcccccc
Q 014540          313 PYITYYCPHCNALNRPKESEGHISGSISSLPPKELEE  349 (423)
Q Consensus       313 e~i~yrC~~Cg~lN~~~~~~~~~~~~~~~~~p~~~~~  349 (423)
                      +|+.|||++|++||++++..++-...+.+..|..+..
T Consensus       239 ~yi~F~C~~Cn~LN~~~k~~e~s~~~~~~a~ps~s~k  275 (328)
T KOG2846|consen  239 EYITFRCPHCNALNPAKKSPENSLEAPQPAPPSSSSK  275 (328)
T ss_pred             CceEEECccccccCCCcCCcccccccCCCCCcccccC
Confidence            9999999999999999998555444444444443333

>COG5415 Predicted integral membrane metal-binding protein [General function prediction only]

Probab=100.00  E-value=4.6e-38  Score=292.61  Aligned_cols=220  Identities=23%  Similarity=0.426  Sum_probs=166.4

Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhcccccchhhhhhhcccchhhhhHHHH
Q 014540           38 GDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSA  117 (423)
Q Consensus        38 ~d~FEK~L~~Ls~kI~~~~srLk~~~~~~Rr~~~~Li~YS~il~ii~lvY~~~~~~~~~~~w~~r~~~~lp~~l~Pili~  117 (423)
                      -.+|-..|..|+.+|.+.+-++++.+.....|..++++||+.++++++.|.||-...     .-..+.+..++++.+-.|
T Consensus        10 ~~~~~~~L~rle~qi~q~~~~~~~~qs~l~~~~~r~tv~slAl~~l~~S~iy~~~~~-----y~~~~~It~~llgs~sly   84 (251)
T COG5415          10 VTKYTADLSRLESQIHQLDVALKKSQSILSQWQSRLTVYSLALTVLALSYIYWEYHG-----YRPYLVITALLLGSGSLY   84 (251)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc-----cchhHHHHHHHHhhhHHH
Confidence            367888999999999999999999999999999999999999999988777752111     111222223333445556


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHhcCCChhHHHHHHHHHhhhcCCCCCCccccC
Q 014540          118 LAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLNVFVG  197 (423)
Q Consensus       118 li~~~~~~f~r~~~~~~e~kL~~L~~e~kkkIeelK~~T~Y~~Tk~LLEKYd~~~~~k~~~~t~~a~k~g~~~~~~~~~~  197 (423)
                      +.++++.+|+.++++|...+|.+|++.|+|+||.||++|.|+.|++|||||+..+..+-       .+++.   .+    
T Consensus        85 mfrwal~~lye~r~~r~~~~L~kLra~~rk~l~~LK~e~~y~aT~~ii~ky~e~~~~~~-------~~l~N---~k----  150 (251)
T COG5415          85 MFRWALTKLYEFRNNRRLRKLAKLRAIHRKKLEKLKEETHYNATSSIIQKYSEELNAKY-------QELNN---LK----  150 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccchhHHH-------HHHhh---HH----
Confidence            67788889999999999999999999999999999999999999999999986643221       11110   00    


Q ss_pred             CCCCCCCCCCCCCCCcCCCCcccccCcCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCCCcccCCCCcHH
Q 014540          198 DESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVSTMHDGGWI  277 (423)
Q Consensus       198 ~e~~~~~~~gks~~~~~~~~~~lr~r~q~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~P~~~~~~~r~W~  277 (423)
                              +.++                      .|+.. .+.               .            -....++||
T Consensus       151 --------~~k~----------------------~~~~~-s~~---------------~------------~~~~~~~w~  172 (251)
T COG5415         151 --------TEKE----------------------KFKKE-SHV---------------K------------KKEDSDAWF  172 (251)
T ss_pred             --------HHhh----------------------ccccc-ccc---------------c------------CcccchHHH
Confidence                    0000                      00000 000               0            011357999


Q ss_pred             HHHHHHHhcCCC---CCcceeeccccccccCccccCCCCceEEEcCCCCCccCCCCCCCC
Q 014540          278 ARIAAILVGDDP---SQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGH  334 (423)
Q Consensus       278 DRIlD~LlGddp---t~ryALIC~~C~~HNGlA~~ee~e~i~yrC~~Cg~lN~~~~~~~~  334 (423)
                      |||+|+|+|+||   .+++||||++||.|||+|.++|.+.+.|+|++|++||+.++..+.
T Consensus       173 D~V~~vl~G~ne~~~~~~~alIC~~C~hhngl~~~~ek~~~efiC~~Cn~~n~~~~~~~d  232 (251)
T COG5415         173 DKVISVLAGGNELDLSPFKALICPQCHHHNGLYRLAEKPIIEFICPHCNHKNDEVKERED  232 (251)
T ss_pred             HHHHHHHhCCCccccCchhhhccccccccccccccccccchheecccchhhcCccccccc
Confidence            999999999998   679999999999999999999999899999999999997766544

>PF10058 DUF2296: Predicted integral membrane metal-binding protein (DUF2296); InterPro: IPR019273 This domain, found mainly in the eukaryotic lunapark proteins, has no known function []

Probab=99.93  E-value=7.4e-27  Score=177.23  Aligned_cols=51  Identities=59%  Similarity=1.178  Sum_probs=50.1

Q ss_pred             HHHHHHHHHhcCCC---CCcceeeccccccccCccccCCCCceEEEcCCCCCcc
Q 014540          276 WIARIAAILVGDDP---SQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN  326 (423)
Q Consensus       276 W~DRIlD~LlGddp---t~ryALIC~~C~~HNGlA~~ee~e~i~yrC~~Cg~lN  326 (423)
                      |||||+|+|+||||   ++||||||++|++||||||++++++++|||++||++|
T Consensus         1 W~Dki~d~L~G~d~~~~~~r~aLIC~~C~~hNGla~~~~~~~i~y~C~~Cg~~N   54 (54)
T PF10058_consen    1 WFDKILDVLLGDDPTSPSNRYALICSKCFSHNGLAPKEEFEEIQYRCPYCGALN   54 (54)
T ss_pred             ChHHHHHHHhCCCCccccCceeEECcccchhhcccccccCCceEEEcCCCCCcC
Confidence            99999999999999   7999999999999999999999999999999999998

>PF10166 DUF2368: Uncharacterised conserved protein (DUF2368); InterPro: IPR019319 This family is conserved from nematodes to humans

Probab=93.18  E-value=2.3  Score=38.31  Aligned_cols=39  Identities=26%  Similarity=0.439  Sum_probs=22.8

Q ss_pred             chhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014540          108 PIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDE  151 (423)
Q Consensus       108 p~~l~Pili~li~~~~~~f~r~~~~~~e~kL~~L~~e~kkkIee  151 (423)
                      |.+++|++...+...+     .+|.-+-++|++.+++=+.++++
T Consensus        74 ~~~l~PlvPL~fv~~Y-----q~D~ayG~kl~RIr~eAE~Il~~  112 (131)
T PF10166_consen   74 PLFLIPLVPLTFVLGY-----QYDMAYGTKLQRIREEAERILEE  112 (131)
T ss_pred             cchhhhHHHHHHHHHH-----HHHHHhhHHHHHHHHHHHHHHHh
Confidence            4566676665443322     22444567788888776655554

The function is not known.

>COG5415 Predicted integral membrane metal-binding protein [General function prediction only]

Probab=91.98  E-value=2.9  Score=40.56  Aligned_cols=62  Identities=6%  Similarity=0.002  Sum_probs=42.9

Q ss_pred             ccceeehhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHHHHHHHHH
Q 014540           22 RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAV   85 (423)
Q Consensus        22 ~~~~~S~~w~~~Fr~~~d~FEK~L~~Ls~kI~~~~srLk~~~~~~Rr~~~~Li~YS~il~ii~l   85 (423)
                      ||.+|++=+--=|+.+=+-.|-++..++.-+.+.++.++.-+  .|-.+.-|.+|.+.+.++|+
T Consensus         1 mG~~f~K~~~~~~~~~L~rle~qi~q~~~~~~~~qs~l~~~~--~r~tv~slAl~~l~~S~iy~   62 (251)
T COG5415           1 MGSRFDKDFVTKYTADLSRLESQIHQLDVALKKSQSILSQWQ--SRLTVYSLALTVLALSYIYW   62 (251)
T ss_pred             CCccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHh
Confidence            566777622111456667788899999998888888776653  35566778888887777765

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=89.24  E-value=0.31  Score=31.51  Aligned_cols=18  Identities=28%  Similarity=0.792  Sum_probs=13.3

Q ss_pred             CccccCCCCceEEEcCCCCC
Q 014540          305 GLARKEDFPYITYYCPHCNA  324 (423)
Q Consensus       305 GlA~~ee~e~i~yrC~~Cg~  324 (423)
                      .+|+.+.  .+.|.||+||+
T Consensus         7 ~i~~r~~--~v~f~CPnCG~   24 (24)
T PF07754_consen    7 PIAPREQ--AVPFPCPNCGF   24 (24)
T ss_pred             cccCccc--CceEeCCCCCC
Confidence            3555544  58999999996

It is likely to bind zinc via its four well-conserved cysteine residues.

>PF04678 DUF607: Protein of unknown function, DUF607; InterPro: IPR006769 This entry represents the C-terminal domain of coiled-coil domain containing protein 109

Probab=88.09  E-value=10  Score=35.47  Aligned_cols=16  Identities=31%  Similarity=0.387  Sum_probs=8.5

Q ss_pred             HHHHHHHHHHHHHHHH
Q 014540           42 EKRLQYISKEEAAILA   57 (423)
Q Consensus        42 EK~L~~Ls~kI~~~~s   57 (423)
                      ++.|..+++++..++.
T Consensus        63 ~~~l~~~~~el~~le~   78 (180)
T PF04678_consen   63 RKRLEELRQELAPLEK   78 (180)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3445566666655443

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=87.81  E-value=9  Score=43.68  Aligned_cols=24  Identities=29%  Similarity=0.297  Sum_probs=13.5

Q ss_pred             HHHHHHHHHhhccChHHHHHHHHhcC
Q 014540          144 ERKAKIDELKERTNYYTTQQLIQRYD  169 (423)
Q Consensus       144 e~kkkIeelK~~T~Y~~Tk~LLEKYd  169 (423)
                      +.++++++  +-|.+..++.=|+|-+
T Consensus       478 e~~kk~~k--e~ta~qe~qael~k~e  501 (1102)
T KOG1924|consen  478 ELEKKFDK--ELTARQEAQAELQKHE  501 (1102)
T ss_pred             HHHHHHHH--HHhHHHHHHHHHHHhh
Confidence            33444443  3566666666666665

>PF00664 ABC_membrane: ABC transporter transmembrane region; InterPro: IPR001140 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems

Probab=87.58  E-value=6.2  Score=35.91  Aligned_cols=38  Identities=8%  Similarity=0.181  Sum_probs=24.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHhcCCC
Q 014540          134 DQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPD  171 (423)
Q Consensus       134 ~e~kL~~L~~e~kkkIeelK~~T~Y~~Tk~LLEKYd~~  171 (423)
                      ..+..+++.....+.++-.+.-..|+.-+..++||+..
T Consensus       172 ~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~  209 (275)
T PF00664_consen  172 YQEANSELNSFLSESLSGIRTIKAFGAEDYFLERFNKA  209 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHTTSHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhhHHHHHHHhhHHHHHHHHHH
Confidence            34445555555566666666666777777778888754

ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). A variety of ATP-binding transport proteins have a six transmembrane helical region. They are all integral membrane proteins involved in a variety of transport systems. Members of this family include; the cystic fibrosis transmembrane conductance regulator (CFTR), bacterial leukotoxin secretion ATP-binding protein, multidrug resistance proteins, the yeast leptomycin B resistance protein, the mammalian sulphonylurea receptor and antigen peptide transporter 2. Many of these proteins have two such regions.; GO: 0005524 ATP binding, 0042626 ATPase activity, coupled to transmembrane movement of substances, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3G61_B 3G5U_B 3G60_A 3B60_D 3QF4_B 2HYD_A 2ONJ_A 4A82_B 4AA3_A 2YL4_A.

>PF10864 DUF2663: Protein of unknown function (DUF2663); InterPro: IPR020210 This entry represents a group of uncharacterised transmembrane proteins

Probab=86.62  E-value=19  Score=32.53  Aligned_cols=29  Identities=21%  Similarity=0.316  Sum_probs=12.3

Q ss_pred             HHHHHHHHHHHHHHHHHHH-hhccChHHHH
Q 014540          134 DQKTLERLRVERKAKIDEL-KERTNYYTTQ  162 (423)
Q Consensus       134 ~e~kL~~L~~e~kkkIeel-K~~T~Y~~Tk  162 (423)
                      .|+.-..||.|-=++=.|| ++....++=.
T Consensus        84 AEkefhaLRcEiI~kS~dLW~~~~~W~~R~  113 (130)
T PF10864_consen   84 AEKEFHALRCEIIQKSKDLWPKEESWKKRH  113 (130)
T ss_pred             HHHHHHHHHHHHHHhHHhcccCchhHHHHH
Confidence            3444555555533333333 2333444333

>TIGR00416 sms DNA repair protein RadA

Probab=84.86  E-value=0.52  Score=50.28  Aligned_cols=31  Identities=29%  Similarity=0.609  Sum_probs=24.3

Q ss_pred             cceeeccccccccCccccCCCCceEEEcCCCCCccCCCC
Q 014540          292 SYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKE  330 (423)
Q Consensus       292 ryALIC~~C~~HNGlA~~ee~e~i~yrC~~Cg~lN~~~~  330 (423)
                      +..-+|++|...        ...+.|+||.|+.||.-..
T Consensus         5 ~~~y~C~~Cg~~--------~~~~~g~Cp~C~~w~t~~~   35 (454)
T TIGR00416         5 KSKFVCQHCGAD--------SPKWQGKCPACHAWNTITE   35 (454)
T ss_pred             CCeEECCcCCCC--------CccccEECcCCCCccccch
Confidence            345689999753        3458999999999998765

The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).

>PRK11823 DNA repair protein RadA; Provisional

Probab=84.67  E-value=0.52  Score=50.08  Aligned_cols=30  Identities=33%  Similarity=0.610  Sum_probs=23.8

Q ss_pred             ceeeccccccccCccccCCCCceEEEcCCCCCccCCCC
Q 014540          293 YALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKE  330 (423)
Q Consensus       293 yALIC~~C~~HNGlA~~ee~e~i~yrC~~Cg~lN~~~~  330 (423)
                      ..-+|++|...        ...+.|+||.|+.||.-..
T Consensus         6 ~~y~C~~Cg~~--------~~~~~g~Cp~C~~w~t~~e   35 (446)
T PRK11823          6 TAYVCQECGAE--------SPKWLGRCPECGAWNTLVE   35 (446)
T ss_pred             CeEECCcCCCC--------CcccCeeCcCCCCccceee
Confidence            34689999764        3458999999999998765

>cd01121 Sms Sms (bacterial radA) DNA repair protein

Probab=84.25  E-value=0.55  Score=48.89  Aligned_cols=27  Identities=30%  Similarity=0.621  Sum_probs=21.6

Q ss_pred             eccccccccCccccCCCCceEEEcCCCCCccCCCC
Q 014540          296 ICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKE  330 (423)
Q Consensus       296 IC~~C~~HNGlA~~ee~e~i~yrC~~Cg~lN~~~~  330 (423)
                      +|++|..        +..-+.|+||.|+.||.-..
T Consensus         2 ~c~~cg~--------~~~~~~g~cp~c~~w~~~~e   28 (372)
T cd01121           2 VCSECGY--------VSPKWLGKCPECGEWNTLVE   28 (372)
T ss_pred             CCCCCCC--------CCCCccEECcCCCCceeeee
Confidence            6999964        34458999999999998654

This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.

>PF10122 Mu-like_Com: Mu-like prophage protein Com; InterPro: IPR019294 Members of this entry belong to the Com family of proteins that act as translational regulators of mom [, ]

Probab=82.63  E-value=0.74  Score=34.94  Aligned_cols=33  Identities=27%  Similarity=0.758  Sum_probs=24.3

Q ss_pred             eeccccccccCccccCCCCceEEEcCCCCCccCCC
Q 014540          295 LICGNCHMHNGLARKEDFPYITYYCPHCNALNRPK  329 (423)
Q Consensus       295 LIC~~C~~HNGlA~~ee~e~i~yrC~~Cg~lN~~~  329 (423)
                      +-|.+|...  ||.-+++.++.-+||.|+.+|--+
T Consensus         5 iRC~~Cnkl--La~~g~~~~leIKCpRC~tiN~~~   37 (51)
T PF10122_consen    5 IRCGHCNKL--LAKAGEVIELEIKCPRCKTINHVR   37 (51)
T ss_pred             eeccchhHH--HhhhcCccEEEEECCCCCccceEe
Confidence            458888554  233257778999999999999755

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	423
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-11

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.7 bits (154), Expect = 6e-11
 Identities = 66/436 (15%), Positives = 124/436 (28%), Gaps = 142/436 (32%)

Query: 40  DFEKRLQYISKEEA-AILARVKRRSQTWR-----RMSRHLIIFTVVFEVIAVGYAIMTTR 93
           D  K +  +SKEE   I+      S T R        +  ++   V EV+ + Y  + + 
Sbjct: 40  DMPKSI--LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP 97

Query: 94  SMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELK 153
                 KT   Q       P +    Y      +R+ +  D +   +  V R     +L+
Sbjct: 98  -----IKTEQRQ-------PSMMTRMYIEQR--DRLYN--DNQVFAKYNVSRLQPYLKLR 141

Query: 154 ERTNYYTTQQLIQRYDPDP---------AAKAAAATVLASKLGADSGLNVFVGDESNFNV 204
                    Q +    P           + K    T +A  +         V  + +F +
Sbjct: 142 ---------QALLELRPAKNVLIDGVLGSGK----TWVALDVCLSYK----VQCKMDFKI 184

Query: 205 ---PLGNSND----VEVMPSSGLRNRKQLQPRSGGAGSTPLH-HSDEETSSSFGSEGPEH 256
               L N N     +E++     +       RS  + +  L  HS +          P  
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244

Query: 257 NQLVV---------------------------------NHHYPQVSTMH--DG------- 274
           N L+V                                       +S  H           
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304

Query: 275 GWIARIAAILVGDDPSQ-------SYALICGNCHMHNGLARKEDFPYITYYCPHCNALNR 327
             + +       D P +         ++I  +  + +GLA  +++ ++      C+ L  
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAES--IRDGLATWDNWKHVN-----CDKLTT 357

Query: 328 PKESEGHISGSISSLPPKELEEL-VSGSI----SNPPLKV------------SEEHVADC 370
                  I  S++ L P E  ++    S+    ++ P  +                V   
Sbjct: 358 I------IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411

Query: 371 SSSS-----PNMSTLT 381
              S     P  ST++
Sbjct: 412 HKYSLVEKQPKESTIS 427

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	423
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	88.28
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	82.36

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=88.28  E-value=0.086  Score=38.93  Aligned_cols=34  Identities=15%  Similarity=0.318  Sum_probs=26.7

Q ss_pred             ceeeccccccccCccccCCCCceEEEcCCCCCccCCCCCCCC
Q 014540          293 YALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGH  334 (423)
Q Consensus       293 yALIC~~C~~HNGlA~~ee~e~i~yrC~~Cg~lN~~~~~~~~  334 (423)
                      -.-||.+|..+||        ...|.|..||+-|-..+.++.
T Consensus        13 ~k~iCpkC~a~~~--------~gaw~CrKCG~~~lr~k~k~~   46 (51)
T 3j21_g           13 KKYVCLRCGATNP--------WGAKKCRKCGYKRLRPKAKEP   46 (51)
T ss_dssp             SEEECTTTCCEEC--------TTCSSCSSSSSCCCEEECCCC
T ss_pred             CCccCCCCCCcCC--------CCceecCCCCCcccccccccc
Confidence            4589999999955        478999999999876665543

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=82.36  E-value=0.59  Score=43.28  Aligned_cols=41  Identities=20%  Similarity=0.293  Sum_probs=28.7

Q ss_pred             CcHHHHHHHHHhcCCCCCcceeeccccc-cccCccccCCCCceEEEcCCCCC
Q 014540          274 GGWIARIAAILVGDDPSQSYALICGNCH-MHNGLARKEDFPYITYYCPHCNA  324 (423)
Q Consensus       274 r~W~DRIlD~LlGddpt~ryALIC~~C~-~HNGlA~~ee~e~i~yrC~~Cg~  324 (423)
                      -.||.+++|.|-.++..  ---+|..|. .|.|-+|        |+||-||+
T Consensus       153 ~~~~~~ll~~l~~~~~~--~~~~C~~CG~i~~g~~p--------~~CP~C~~  194 (202)
T 1yuz_A          153 AERYLAAYNDIDAPDDD--KFHLCPICGYIHKGEDF--------EKCPICFR  194 (202)
T ss_dssp             HHHHHHHHHTTTCCCSC--CEEECSSSCCEEESSCC--------SBCTTTCC
T ss_pred             HHHHHHHHHHHhcCCCC--cEEEECCCCCEEcCcCC--------CCCCCCCC
Confidence            35888888887655332  357899995 4577222        89999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	423
d1twfi2	72	RBP9 subunit of RNA polymerase II {Baker's yeast (	91.42

>d1twfi2 g.41.3.1 (I:50-121) RBP9 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: RBP9 subunit of RNA polymerase II
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.42  E-value=0.064  Score=40.41  Aligned_cols=47  Identities=17%  Similarity=0.472  Sum_probs=32.2

Q ss_pred             cCCCCC-cceeeccccccccCcccc------CCCCceEEEcCCCCC-ccCCCCCC
Q 014540          286 GDDPSQ-SYALICGNCHMHNGLARK------EDFPYITYYCPHCNA-LNRPKESE  332 (423)
Q Consensus       286 Gddpt~-ryALIC~~C~~HNGlA~~------ee~e~i~yrC~~Cg~-lN~~~~~~  332 (423)
                      |.||+- +-...|.+|..+...+-.      .|...+-|+|.+||+ |-..++.+
T Consensus        14 ~~DPtlp~t~~~CpkCg~~~a~~~q~QtRsaDE~mT~Fy~C~~C~h~Wr~~~~~~   68 (72)
T d1twfi2          14 GSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNK   68 (72)
T ss_dssp             GGCTTSCCCCCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEEECCTTCC
T ss_pred             ccCCCCCccCCCCCCCCCCeEEEEEeecCccCCCceEEEEcCCCCCCcccccccc
Confidence            556653 345789999966665542      367789999999998 55544443