Citrus Sinensis ID: 014568

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
MAKLLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASSSAYSANPKSKLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSNRHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK
cHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccHHHHHHHHHHcccEEEEEEccccccccEEcccccccEEEEEccccccccccccHHHHHHHHHccccEEEEEcccccHHHHHHHHHHccccccccccEEEccccccccccccccEEEEccccccccEEEccccccccEEEEccEEEEcccccEEEEEEEccccccccccccccccccccccccEEEEEEEEEEcccEEEEEEccHHcccccccccHHHHHHHHHHHHHccccEEEEEEEEEEEcccccccccEEEcccEEEEEEEEEEEccEEEEcccccEEEEEEEEccEEEcccccccccEEEEEEEcccEEEEEEEEEEEEEccccEEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHEEEEEcc
cHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccHHHHHHHHHHHHHHHHcccEEEEEcccccccEEEEcccccccEEEEEccccccccccccHHHHHHHHHccccEEEEEcccccHHHHHHHHHcccccccccccEEEEcccccccccccccEEEEcccccccccEcccccccccEEEccEEEEEccccccEEEEEEcccccEEcccccccccccccHcHHHHHHHHHHHccccEEEEEccHHHHHccccccHHHHHHHHHHHHHHHHccEEEEEEEEEEcccccccccEEEEEccEEEEEEEEEEccccEEEcccccEEEEEEEccccEEEEcccccccEEEEEEEcccccEEEEEEEEEcccccEEEEEcEEEEEEcccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHcc
MAKLLLYLTLATSliplfsvafspenptdrRVLVLVDDfaiksshslyfgsltsrgfqlefkladdpniglqryGQYLYDALVLFcpsverfggsidvasIVDFVDSGHDLIVAADSNASDLIREVATecgvdfdedpaamvIDHINYavsnfdgdhtliasddfiKADVILgskkieapvlfqgighslnpANSLVLKVLSASssaysanpksklsnppsltgsaISLVSVVQARNNARILITGSlsmfsnrheksgnEQFLTEISKWVFherghlkavnvrhhkvgesdepaiyrinddleYSVEIYEwsgtswepyvsddVQVQFYMMSPYVLktlstdqkghysaefkvpdvygvfQFKVEYQRLGytslslskqipvrpyrhneyerflpaaypyygsafsMMAGFFIFTIVHLYSK
MAKLLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASSSAYsanpksklsnppslTGSAISLVSVVQARNNARILITgslsmfsnrhEKSGNEQFLTEISKWVFHERGHLKAVnvrhhkvgesdepaiyriNDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGytslslskqipvrpyrhnEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK
MAKlllyltlatsliplFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPanslvlkvlsasssaysanpkskLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSNRHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK
***LLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVL************************AISLVSVVQARNNARILITGSLSMF*********EQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLY**
***LLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSV******ID**SIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASSSAYSAN******N**SLTGSAISLVSVVQARNNARILITGSLSMFSNRHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK
MAKLLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASS***************SLTGSAISLVSVVQARNNARILITGSLSMFSNRHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK
*AKLLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASSSAYSANPKSKLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSNRHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
iiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAKLLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASSSAYSANPKSKLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSNRHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query422 2.2.26 [Sep-21-2011]
Q6ZLK0439 Dolichyl-diphosphooligosa yes no 0.940 0.904 0.756 0.0
Q944K2437 Dolichyl-diphosphooligosa yes no 0.969 0.935 0.723 0.0
Q6NYS8441 Dolichyl-diphosphooligosa yes no 0.924 0.884 0.472 1e-107
O54734441 Dolichyl-diphosphooligosa yes no 0.919 0.879 0.469 1e-106
Q641Y0441 Dolichyl-diphosphooligosa yes no 0.919 0.879 0.464 1e-106
Q5R501439 Dolichyl-diphosphooligosa yes no 0.919 0.883 0.464 1e-106
P39656456 Dolichyl-diphosphooligosa yes no 0.919 0.850 0.464 1e-106
Q6GNR9438 Dolichyl-diphosphooligosa N/A no 0.919 0.885 0.464 1e-105
A6QPY0439 Dolichyl-diphosphooligosa yes no 0.919 0.883 0.464 1e-105
B1H3C9437 Dolichyl-diphosphooligosa yes no 0.919 0.887 0.457 1e-105
>sp|Q6ZLK0|OST48_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Oryza sativa subsp. japonica GN=OST48 PE=2 SV=1 Back     alignment and function desciption
 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/411 (75%), Positives = 358/411 (87%), Gaps = 14/411 (3%)

Query: 26  NPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLF 85
            P  RRVLVLVDD A++SSHS +F SL  RGF L+F+LADDP + L RYGQYLYD LVLF
Sbjct: 29  GPRGRRVLVLVDDLAVRSSHSAFFASLQGRGFDLDFRLADDPKLSLHRYGQYLYDGLVLF 88

Query: 86  CPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDH 145
            PS  RFGGS+D  SI++F+D+GHD+I+AADS+ASDLIR +ATECGVDFDEDP AMVIDH
Sbjct: 89  APSTPRFGGSVDQNSILEFIDAGHDMILAADSSASDLIRGIATECGVDFDEDPEAMVIDH 148

Query: 146 INYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASS 205
           INYA ++ +GDHTLIA DD I++DVILGSKKIEAPVLF+GIGH++NP+NSLVLKVLSAS 
Sbjct: 149 INYAATDAEGDHTLIAGDDLIQSDVILGSKKIEAPVLFRGIGHAVNPSNSLVLKVLSASP 208

Query: 206 SAYSANPKSKLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN------------- 252
           SAYSANPKSKL++PPSLTGSAISLVSV+QARNNAR+LI+GSL +FSN             
Sbjct: 209 SAYSANPKSKLASPPSLTGSAISLVSVMQARNNARVLISGSLDLFSNRFLKSGVQKAGSK 268

Query: 253 -RHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSVEIYEW 311
            RHEK+GNEQF+TE SKWVFHERGHLKAVNV+H+KVGE++EP +YRINDDLEYSVEIYEW
Sbjct: 269 IRHEKAGNEQFVTETSKWVFHERGHLKAVNVKHNKVGETNEPGMYRINDDLEYSVEIYEW 328

Query: 312 SGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGY 371
           SGTSW+PYV+DDVQVQFYMMSPYVLKTLSTD+KG +S  FKVPDVYGVFQFKVEYQRLGY
Sbjct: 329 SGTSWKPYVADDVQVQFYMMSPYVLKTLSTDKKGVFSTSFKVPDVYGVFQFKVEYQRLGY 388

Query: 372 TSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 422
           T LSLSKQIPVRPYRHNEYERF+ +AYPYY ++FS M  FFIF+ V+LY K
Sbjct: 389 TGLSLSKQIPVRPYRHNEYERFITSAYPYYAASFSTMGAFFIFSFVYLYHK 439
Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: 8
>sp|Q944K2|OST48_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Arabidopsis thaliana GN=OST48 PE=2 SV=1 Back     alignment and function description
>sp|Q6NYS8|OST48_DANRE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Danio rerio GN=ddost PE=2 SV=2 Back     alignment and function description
>sp|O54734|OST48_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus GN=Ddost PE=1 SV=2 Back     alignment and function description
>sp|Q641Y0|OST48_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus GN=Ddost PE=2 SV=1 Back     alignment and function description
>sp|Q5R501|OST48_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Pongo abelii GN=DDOST PE=2 SV=2 Back     alignment and function description
>sp|P39656|OST48_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Homo sapiens GN=DDOST PE=1 SV=4 Back     alignment and function description
>sp|Q6GNR9|OST48_XENLA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus laevis GN=ddost PE=2 SV=1 Back     alignment and function description
>sp|A6QPY0|OST48_BOVIN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Bos taurus GN=DDOST PE=2 SV=2 Back     alignment and function description
>sp|B1H3C9|OST48_XENTR Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis GN=ddost PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
255637909433 unknown [Glycine max] 0.992 0.967 0.798 0.0
356545281433 PREDICTED: dolichyl-diphosphooligosaccha 0.992 0.967 0.788 0.0
225428556435 PREDICTED: dolichyl-diphosphooligosaccha 0.997 0.967 0.779 0.0
388516067434 unknown [Medicago truncatula] 0.995 0.967 0.788 0.0
449455194435 PREDICTED: dolichyl-diphosphooligosaccha 0.997 0.967 0.788 0.0
356538809446 PREDICTED: LOW QUALITY PROTEIN: dolichyl 0.992 0.939 0.802 0.0
225430846435 PREDICTED: dolichyl-diphosphooligosaccha 0.997 0.967 0.747 0.0
255556111475 dolichyl-diphosphooligosaccharide--prote 0.917 0.814 0.805 0.0
115471133439 Os07g0209000 [Oryza sativa Japonica Grou 0.940 0.904 0.756 0.0
222636651 562 hypothetical protein OsJ_23522 [Oryza sa 0.940 0.706 0.756 0.0
>gi|255637909|gb|ACU19272.1| unknown [Glycine max] Back     alignment and taxonomy information
 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/436 (79%), Positives = 389/436 (89%), Gaps = 17/436 (3%)

Query: 1   MAKLLLYLTLATSLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLE 60
           M+KL+       SLIPL   +FSPE P+DRRVLVL+DDFAIKSSHSL+F SL SRGF L+
Sbjct: 1   MSKLIFVFL---SLIPLLCTSFSPERPSDRRVLVLLDDFAIKSSHSLFFNSLKSRGFDLQ 57

Query: 61  FKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNAS 120
           F  ADDP I LQRYGQYLYDAL+LF P++ERFGGSID A+I+DFVDSGHDLIVAADSNAS
Sbjct: 58  FHPADDPKIALQRYGQYLYDALILFSPTIERFGGSIDAAAILDFVDSGHDLIVAADSNAS 117

Query: 121 DLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAP 180
           DLIRE+ATECGV FDEDPAA+V+DH  YAVS  +GDHTLIASDDFIK+DVILGSKKIEAP
Sbjct: 118 DLIREIATECGVVFDEDPAAVVVDHSGYAVSATEGDHTLIASDDFIKSDVILGSKKIEAP 177

Query: 181 VLFQGIGHSLNPANSLVLKVLSASSSAYSANPKSKLSNPPSLTGSAISLVSVVQARNNAR 240
           VLFQGIGHSLNP NSLVLKVLSAS SA+SANPKSKL++PPSLTG++ISLVSV+QAR+NAR
Sbjct: 178 VLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKLTSPPSLTGTSISLVSVIQARSNAR 237

Query: 241 ILITGSLSMFSNR--------------HEKSGNEQFLTEISKWVFHERGHLKAVNVRHHK 286
           ILI+GSLS+FSNR              HEKSGNEQFL E+SKW+FHERGHLKAV+V+HHK
Sbjct: 238 ILISGSLSLFSNRFFTSGVQKAGSPTKHEKSGNEQFLNELSKWIFHERGHLKAVHVQHHK 297

Query: 287 VGESDEPAIYRINDDLEYSVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGH 346
           VGE++EPAIYRIND+LEYSVE+YEWSGT+WEPYV+DDVQVQFYMMSPYVLKTLSTD KGH
Sbjct: 298 VGEANEPAIYRINDNLEYSVEVYEWSGTTWEPYVADDVQVQFYMMSPYVLKTLSTDGKGH 357

Query: 347 YSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFS 406
           Y   FKVPDVYGVFQFKVEY++LGYTSLSLSKQIPVRP+RHNEYERF+PAAYPYYG+AFS
Sbjct: 358 YFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYERFIPAAYPYYGAAFS 417

Query: 407 MMAGFFIFTIVHLYSK 422
           MMAGFFIFT VHLYSK
Sbjct: 418 MMAGFFIFTAVHLYSK 433

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356545281|ref|XP_003541072.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Glycine max] Back     alignment and taxonomy information
>gi|225428556|ref|XP_002284627.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [Vitis vinifera] gi|297741420|emb|CBI32551.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388516067|gb|AFK46095.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449455194|ref|XP_004145338.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Cucumis sativus] gi|449474793|ref|XP_004154287.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Cucumis sativus] gi|449502375|ref|XP_004161623.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356538809|ref|XP_003537893.1| PREDICTED: LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Glycine max] Back     alignment and taxonomy information
>gi|225430846|ref|XP_002273758.1| PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [Vitis vinifera] gi|297735209|emb|CBI17571.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255556111|ref|XP_002519090.1| dolichyl-diphosphooligosaccharide--protein glycosyltransferase, putative [Ricinus communis] gi|223541753|gb|EEF43301.1| dolichyl-diphosphooligosaccharide--protein glycosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|115471133|ref|NP_001059165.1| Os07g0209000 [Oryza sativa Japonica Group] gi|75136558|sp|Q6ZLK0.1|OST48_ORYSJ RecName: Full=Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Short=Oligosaccharyl transferase 48 kDa subunit; Flags: Precursor gi|38175467|dbj|BAC82967.2| putative dolichyl-di-phosphooligosaccharide- protein [Oryza sativa Japonica Group] gi|113610701|dbj|BAF21079.1| Os07g0209000 [Oryza sativa Japonica Group] gi|215765199|dbj|BAG86896.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|222636651|gb|EEE66783.1| hypothetical protein OsJ_23522 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
TAIR|locus:2173659437 DGL1 "DEFECTIVE GLYCOSYLATION" 0.957 0.924 0.679 1e-155
ZFIN|ZDB-GENE-040426-2147466 ddost "dolichyl-diphosphooligo 0.924 0.836 0.447 6.3e-92
UNIPROTKB|P39656456 DDOST "Dolichyl-diphosphooligo 0.919 0.850 0.440 9.3e-91
UNIPROTKB|Q5R501439 DDOST "Dolichyl-diphosphooligo 0.919 0.883 0.440 9.3e-91
MGI|MGI:1194508441 Ddost "dolichyl-di-phosphoolig 0.919 0.879 0.444 9.3e-91
RGD|1308970441 Ddost "dolichyl-diphosphooligo 0.919 0.879 0.440 9.3e-91
UNIPROTKB|Q641Y0441 Ddost "Dolichyl-diphosphooligo 0.919 0.879 0.440 9.3e-91
UNIPROTKB|Q6GNR9438 ddost "Dolichyl-diphosphooligo 0.919 0.885 0.440 1.2e-90
UNIPROTKB|F7CBX0454 DDOST "Uncharacterized protein 0.919 0.854 0.440 1.5e-90
UNIPROTKB|B1H3C9437 ddost "Dolichyl-diphosphooligo 0.919 0.887 0.432 3.1e-90
TAIR|locus:2173659 DGL1 "DEFECTIVE GLYCOSYLATION" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1518 (539.4 bits), Expect = 1.0e-155, P = 1.0e-155
 Identities = 284/418 (67%), Positives = 341/418 (81%)

Query:    19 SVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYL 78
             S +FS +NPTDRRVLVL+DD ++KSSHS++F +L SRGF L+FKLA+D  + LQRYGQYL
Sbjct:    20 SFSFSVDNPTDRRVLVLLDDLSLKSSHSIFFNTLKSRGFDLDFKLAEDSKLALQRYGQYL 79

Query:    79 YDALVLFCPSVERFGGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDP 138
             YD L++F PS ERFGGS+D  SI DFVDSG DLI++AD+ ASDLIR +ATECGVDFDED 
Sbjct:    80 YDGLIIFAPSTERFGGSLDSKSIADFVDSGRDLILSADTAASDLIRGIATECGVDFDEDS 139

Query:   139 AAMVIDHINYAVSNFDGDHTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPXXXXXX 198
             +AMVIDH +++VS+ DGDHTLIA+DD +K+DVILG  KIEAPVLF+G+ HSLNP      
Sbjct:   140 SAMVIDHTSFSVSDVDGDHTLIAADDLVKSDVILGKTKIEAPVLFRGVAHSLNPTNNLVL 199

Query:   199 XXXXXXXXXXXXXXXXXLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFS------- 251
                              LS+PP LTGS+ISLVSV+QARNNAR++I+GS+ +FS       
Sbjct:   200 KVLSASPSAYSANPSSKLSSPPQLTGSSISLVSVMQARNNARVVISGSVQLFSDRLIRSG 259

Query:   252 -------NRHEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEY 304
                    N++EKSGNEQF+TE+SKWVFHERGHLKA N+ HH+VGE+DEPAIYRI DDLE+
Sbjct:   260 VQKAGSPNQYEKSGNEQFVTELSKWVFHERGHLKAGNLVHHRVGETDEPAIYRIKDDLEF 319

Query:   305 SVEIYEWSGTSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKV 364
             SVEIYEWSG SWEPYV++DVQVQFYMMSPYVLKTLSTD+KG +   FKVPDVYGVFQFKV
Sbjct:   320 SVEIYEWSGKSWEPYVANDVQVQFYMMSPYVLKTLSTDKKGLFHTSFKVPDVYGVFQFKV 379

Query:   365 EYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 422
             EY++LGYT+LSLSKQIPVRPYRHNEYERF+P AYPYYG+ F+ MAGFF+F+ V+LY K
Sbjct:   380 EYEKLGYTTLSLSKQIPVRPYRHNEYERFIPTAYPYYGACFTTMAGFFVFSFVYLYHK 437
GO:0004579 "dolichyl-diphosphooligosaccharide-protein glycotransferase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005789 "endoplasmic reticulum membrane" evidence=ISS
GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IEA;ISS;IMP
GO:0005730 "nucleolus" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0008250 "oligosaccharyltransferase complex" evidence=ISS
GO:0009664 "plant-type cell wall organization" evidence=RCA;IMP
GO:0009826 "unidimensional cell growth" evidence=IMP
GO:0030244 "cellulose biosynthetic process" evidence=RCA;IMP
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0001510 "RNA methylation" evidence=RCA
GO:0042545 "cell wall modification" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
ZFIN|ZDB-GENE-040426-2147 ddost "dolichyl-diphosphooligosaccharide-protein glycosyltransferase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P39656 DDOST "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5R501 DDOST "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit" [Pongo abelii (taxid:9601)] Back     alignment and assigned GO terms
MGI|MGI:1194508 Ddost "dolichyl-di-phosphooligosaccharide-protein glycotransferase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1308970 Ddost "dolichyl-diphosphooligosaccharide-protein glycosyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q641Y0 Ddost "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GNR9 ddost "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|F7CBX0 DDOST "Uncharacterized protein" [Equus caballus (taxid:9796)] Back     alignment and assigned GO terms
UNIPROTKB|B1H3C9 ddost "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6ZLK0OST48_ORYSJ2, ., 4, ., 9, 9, ., 1, 80.75660.94070.9043yesno
B1H3C9OST48_XENTR2, ., 4, ., 1, ., 1, 1, 90.45720.91940.8878yesno
Q29381OST48_PIG2, ., 4, ., 1, ., 1, 1, 90.46210.91940.8838yesno
P39656OST48_HUMAN2, ., 4, ., 1, ., 1, 1, 90.46450.91940.8508yesno
Q24319OST48_DROME2, ., 4, ., 1, ., 1, 1, 90.44090.93120.8752yesno
Q6NYS8OST48_DANRE2, ., 4, ., 1, ., 1, 1, 90.47200.92410.8843yesno
Q944K2OST48_ARATH2, ., 4, ., 9, 9, ., 1, 80.72340.96910.9359yesno
Q54E62OST48_DICDI2, ., 4, ., 1, ., 1, 1, 90.36320.96200.9530yesno
P48440OST48_CHICK2, ., 4, ., 1, ., 1, 1, 90.45230.91940.9394yesno
A6QPY0OST48_BOVIN2, ., 4, ., 1, ., 1, 1, 90.46450.91940.8838yesno
P45971OST48_CAEEL2, ., 4, ., 1, ., 1, 1, 90.43030.92410.8764yesno
O59866OSTB_SCHPO2, ., 4, ., 1, ., 1, 1, 90.32110.91460.8832yesno
Q5R501OST48_PONAB2, ., 4, ., 1, ., 1, 1, 90.46450.91940.8838yesno
O54734OST48_MOUSE2, ., 4, ., 1, ., 1, 1, 90.46940.91940.8798yesno
Q641Y0OST48_RAT2, ., 4, ., 1, ., 1, 1, 90.46450.91940.8798yesno
Q05052OST48_CANFA2, ., 4, ., 1, ., 1, 1, 90.46210.91940.8719yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.921
4th Layer2.4.1.1190.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
pfam03345421 pfam03345, DDOST_48kD, Oligosaccharyltransferase 4 1e-152
>gnl|CDD|217504 pfam03345, DDOST_48kD, Oligosaccharyltransferase 48 kDa subunit beta Back     alignment and domain information 
 Score =  436 bits (1124), Expect = e-152
 Identities = 179/412 (43%), Positives = 249/412 (60%), Gaps = 24/412 (5%)

Query: 32  VLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVER 91
            LV++D  A K ++S +F SL SRG++L FK   D ++ L +YG+ LYD L+LF P  + 
Sbjct: 1   TLVVLDSLAEKETYSTFFKSLESRGYELTFKSPKDESLSLFKYGERLYDHLILFPPKSKG 60

Query: 92  FGGSIDVASIVDFVDSGHDLIVAADSNA-SDLIREVATECGVDFDEDPAAMVIDHINYAV 150
            G S+    +++F+D G +++VA  S    D IRE+ +E G++ DE     V+DH NY V
Sbjct: 61  LGPSLSPKKLLEFIDKGGNVLVALSSETIPDAIRELLSELGIELDERNTV-VVDHFNYDV 119

Query: 151 SNFDGDHTLI--ASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLVLKVLSASSSAY 208
           S+  GDHT++    ++ I++D  +G    E P+LF+G+G  L   N LVL +L A S+AY
Sbjct: 120 SSASGDHTVLVLDPNNLIRSDTKVG-FGGEKPILFRGVGALLGN-NPLVLPILRAPSTAY 177

Query: 209 SANPKSKLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN-----------RHEKS 257
           S NPK K    P   GS   LVS +QARNNAR++  GSL  FS+           +H K+
Sbjct: 178 SYNPKEKEEEVPWAVGSQGFLVSALQARNNARVVFVGSLEFFSDEWFSASVKKAGKHVKT 237

Query: 258 GNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDE-PAIYRINDDLEYSVEIYEWSGTSW 316
           GN +F  E++KWVF E+G LK   V HHK GE    P IY I D++ YS+EI E+S   W
Sbjct: 238 GNREFAKELTKWVFKEKGVLKVGKVTHHKAGEPSYNPEIYTIKDEVVYSIEISEYSNGKW 297

Query: 317 EPYVSDDVQVQFYMMSPYVLKTL----STDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYT 372
            P+ +DD+Q++F M+ PY   TL     T   G YS  FK+PDV+GVF FKV+Y+R G T
Sbjct: 298 VPFEADDIQLEFTMLDPYYRLTLKPSRRTSDSGVYSTSFKLPDVHGVFTFKVDYKRPGLT 357

Query: 373 SLSLSKQIPVRPYRHNEYER--FLPAAYPYYGSAFSMMAGFFIFTIVHLYSK 422
            +    Q+ VR   H+EY R  F+  A+PYY S FS++ GF  F  V LYSK
Sbjct: 358 FIEEKTQVTVRHLAHDEYPRSWFITNAWPYYASIFSVIIGFLAFVAVFLYSK 409

Members of this family are involved in asparagine-linked protein glycosylation. In particular, dolichyl-diphosphooligosaccharide-protein glycosyltransferase (DDOST), also known as oligosaccharyltransferase EC:2.4.1.119, transfers the high-mannose sugar GlcNAc(2)-Man(9)-Glc(3) from a dolichol-linked donor to an asparagine acceptor in a consensus Asn-X-Ser/Thr motif. In most eukaryotes, the DDOST complex is composed of three subunits, which in humans are described as a 48kD subunit, ribophorin I, and ribophorin II. However, the yeast DDOST appears to consist of six subunits (alpha, beta, gamma, delta, epsilon, zeta). The yeast beta subunit is a 45kD polypeptide, previously discovered as the Wbp1 protein, with known sequence similarity to the human 48kD subunit and the other orthologues. This family includes the 48kD-like subunits from several eukaryotes; it also includes the yeast DDOST beta subunit Wbp1. Length = 421

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 422
KOG2754443 consensus Oligosaccharyltransferase, beta subunit 100.0
PF03345423 DDOST_48kD: Oligosaccharyltransferase 48 kDa subun 100.0
TIGR03521552 GldG gliding-associated putative ABC transporter s 99.75
KOG3861438 consensus Sensory cilia assembly protein [Extracel 99.47
PF09822271 ABC_transp_aux: ABC-type uncharacterized transport 99.12
COG3225538 GldG ABC-type uncharacterized transport system inv 96.83
PF1425870 DUF4350: Domain of unknown function (DUF4350) 96.49
PF09960 585 DUF2194: Uncharacterized protein conserved in bact 95.4
cd03142215 GATase1_ThuA Type 1 glutamine amidotransferase (GA 94.41
PF0183599 A2M_N: MG2 domain; InterPro: IPR002890 The protein 94.2
KOG42661033 consensus Subtilisin kexin isozyme-1/site 1 protea 92.99
PF06283217 ThuA: Trehalose utilisation; PDB: 4E5V_A 1T0B_A. 92.78
cd03143154 A4_beta-galactosidase_middle_domain A4 beta-galact 92.63
PF08532207 Glyco_hydro_42M: Beta-galactosidase trimerisation 92.24
PF07090177 DUF1355: Protein of unknown function (DUF1355); In 87.2
PRK05568142 flavodoxin; Provisional 86.06
PF00630101 Filamin: Filamin/ABP280 repeat; InterPro: IPR01786 85.75
COG5426254 Uncharacterized membrane protein [Function unknown 83.19
PRK05569141 flavodoxin; Provisional 82.77
PF10634151 Iron_transport: Fe2+ transport protein; InterPro: 81.24
>KOG2754 consensus Oligosaccharyltransferase, beta subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=7.7e-132  Score=965.64  Aligned_cols=405  Identities=56%  Similarity=0.953  Sum_probs=386.3

Q ss_pred             HHhhhhccccccCCCCCCeEEEEEcCcccccchhHHHHHHHhCCceEEEeeCCCCCccccccCccccCEEEEeCCCCCCC
Q 014568           13 SLIPLFSVAFSPENPTDRRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERF   92 (422)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~r~LVlld~~~~~~~~S~f~~~L~~rG~~v~~~~~~d~~l~L~~~g~~~yd~LVI~~p~~~~~   92 (422)
                      +||++..++.+    .+.|+|||+|+..++++||.|+++|++|||+++++.++|+++.|++||+++|||||||+|+.+.|
T Consensus        11 llla~~~~v~~----~~~RtLVL~d~~~~~ethSvFl~sLkdRgf~L~~~~a~dssl~L~~Ygq~LyDnlIifap~~e~f   86 (443)
T KOG2754|consen   11 LLLALIGFVLS----QAARTLVLLDNLAVKETHSVFLKSLKDRGFKLTYKLADDSSLALFKYGQRLYDNLIIFAPSVENF   86 (443)
T ss_pred             HHHHHHHHHhc----ccCcEEEEeeccccccchhhhhhhHHhcCceeEEEecCCchhHHHHhhhHhhccEEEecCchhhc
Confidence            55666664443    34599999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccHHHHHHHHHCCCcEEEEeCCCCcHHHHHHHHHcCceecCCCCeEEEeccCccccCCCCCceEEeeccccccceec
Q 014568           93 GGSIDVASIVDFVDSGHDLIVAADSNASDLIREVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFIKADVIL  172 (422)
Q Consensus        93 ~~~~e~~~L~~Fi~~GGNlLi~~~~~~~~~l~~ll~elGI~~~~~~~~~VvD~f~~~~~~~~~~~~~iv~~~~i~~~~i~  172 (422)
                      +++++++.|.+|+|+|||||+++++..++.||+|++||||+++++ |+.||||++++..++.++|+++.+++.+.++.|+
T Consensus        87 gg~is~k~l~~Fvd~gGnvlv~ass~~~d~iRe~~~E~g~~~~e~-~~~ViDH~~~d~s~~sgdhtli~~~nl~~~~~Iv  165 (443)
T KOG2754|consen   87 GGSISVKSLAKFVDSGGNVLVAASSAIGDAIREFASECGIEFDEE-GAAVIDHHNYDVSSDSGDHTLIVADNLLKAPYIV  165 (443)
T ss_pred             CCCCCHHHHHHHHhCCCcEEEEcCCcccHHHHHHHHHhCcccCcc-cceeeeeeeccccCCCCCeEEEeecccccCceee
Confidence            999999999999999999999999999999999999999999999 8999999999977788899999998888889999


Q ss_pred             cCCcccCceeeeceeEEeecCCceeEeeeEeCCceeecCCCCCCCCCCCCCCCceeEEEEEEecCCcEEEEEeccccccC
Q 014568          173 GSKKIEAPVLFQGIGHSLNPANSLVLKVLSASSSAYSANPKSKLSNPPSLTGSAISLVSVVQARNNARILITGSLSMFSN  252 (422)
Q Consensus       173 ~~~~~~~~vl~~g~g~~l~~~n~~~~pIL~a~~tsys~~~~~~~~~~~~~~G~~~~LvaalQ~~nnaRvvvvGS~d~fSd  252 (422)
                      +......|++|+|+||.++|+||++.|||+|++|||+++++.+....||++|+|+.||+++|+||||||+|+||.|||||
T Consensus       166 g~~~~~~piLfrgig~~l~~~n~lvl~IL~a~~TsYs~np~a~~s~np~a~Gs~~~LV~~lQarNNARvv~sGS~d~fsd  245 (443)
T KOG2754|consen  166 GKSKRAAPILFRGIGHVLGPTNPLVLPILRASPTSYSYNPEAKVSCNPWAAGSQTLLVSGLQARNNARVVFSGSSDFFSD  245 (443)
T ss_pred             ccccccCCeeeecchhhcCCCCcceeeeecCCCcceecCcccccccCccccccceEEEEeeeccCCceEEEeccHHhhhc
Confidence            87665689999999999999999999999999999999998888889999999999999999999999999999999999


Q ss_pred             c--------------cCccchHHHHHHHhhcccccCceEEEeeeEEeecCCCCCCc-ceEeCCceEEEEEEEEEeCCeee
Q 014568          253 R--------------HEKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPA-IYRINDDLEYSVEIYEWSGTSWE  317 (422)
Q Consensus       253 ~--------------~~~~~N~~f~~~l~~W~f~e~gvlr~~~~~H~~~~~~~~~~-~Y~i~d~v~y~i~i~e~~~~~w~  317 (422)
                      +              ..++||++|+.+|.+|+|+|+||||+.++.|||++|+.+|. .|||||+++|||+|+||++|+|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~sgN~~fA~~lskWvF~E~gvLr~~~~~hhkvget~~p~e~Y~IkD~viySI~i~el~~g~w~  325 (443)
T KOG2754|consen  246 EFFSSQVQSASSSVQYEQSGNQEFATELSKWVFKEKGVLRVGNVVHHKVGETLPPEEAYRIKDDVIYSIGISELSGGEWV  325 (443)
T ss_pred             ccccccccccCCcchhhccccHHHHHHHHHhhhcccceEEeeeceecccCCcCCCccceeecccEEEEEEEEEecCCeee
Confidence            9              34678999999999999999999999999999999998666 99999999999999999999999


Q ss_pred             ecccCCeEEEEEEeCceEeeccccCCCceEEEEEecCCceeeeEEEEeeeeccceeeeeeeeEeecCCCCCcccccccCC
Q 014568          318 PYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTSLSLSKQIPVRPYRHNEYERFLPAA  397 (422)
Q Consensus       318 P~~~~d~QlEf~mldPy~R~~l~~~~~~~y~~~f~~PD~hGvf~f~v~Y~R~G~t~l~~~~~v~VR~~~hdey~R~i~~a  397 (422)
                      ||++|||||||+|+|||+|++|+|.+.|.|++.||+||+||||||+|||||+|||+|.+++|++||||+||||||||++|
T Consensus       326 P~~adDvQlEfv~iDPyvR~tL~~~~~g~~~~~FklPDvyGvFqFkvdY~r~GyT~l~~~~qvsvRpl~h~eYeRfIpsA  405 (443)
T KOG2754|consen  326 PFVADDVQLEFVRIDPYVRTTLKPSGQGYYSAEFKLPDVYGVFQFKVDYRRLGYTHLYDKTQVSVRPLAHTEYERFIPSA  405 (443)
T ss_pred             eecccceEEEEEEeCchheeEEecCCCceEEEEEecCCeeceEEEEEecccccceeeeccceEeeeeccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHhhheeeeeccC
Q 014568          398 YPYYGSAFSMMAGFFIFTIVHLYSK  422 (422)
Q Consensus       398 ~pyy~s~~~~~~~~~~F~~~~l~~~  422 (422)
                      ||||+|||+||+|||+||++||+||
T Consensus       406 ypYyas~fs~m~g~~~Fs~vfL~~k  430 (443)
T KOG2754|consen  406 YPYYASCFSMMAGFFLFSFVFLYHK  430 (443)
T ss_pred             chHHHHHHHHHHHHheeeEEEEEec
Confidence            9999999999999999999999987

>PF03345 DDOST_48kD: Oligosaccharyltransferase 48 kDa subunit beta; InterPro: IPR005013 During N-linked glycosylation of proteins, oligosaccharide chains are assembled on the carrier molecule dolichyl pyrophosphate in the following order: 2 molecules of N-acetylglucosamine (GlcNAc), 9 molecules of mannose, and 3 molecules of glucose Back     alignment and domain information
>TIGR03521 GldG gliding-associated putative ABC transporter substrate-binding component GldG Back     alignment and domain information
>KOG3861 consensus Sensory cilia assembly protein [Extracellular structures] Back     alignment and domain information
>PF09822 ABC_transp_aux: ABC-type uncharacterized transport system; InterPro: IPR019196 This domain is found in various eukaryotic and prokaryotic intra-flagellar transport proteins involved in gliding motility, as well as in several hypothetical proteins Back     alignment and domain information
>COG3225 GldG ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility and secretion] Back     alignment and domain information
>PF14258 DUF4350: Domain of unknown function (DUF4350) Back     alignment and domain information
>PF09960 DUF2194: Uncharacterized protein conserved in bacteria (DUF2194); InterPro: IPR018695 This family of prokaryotic proteins has no known function; however it may be a membrane protein Back     alignment and domain information
>cd03142 GATase1_ThuA Type 1 glutamine amidotransferase (GATase1)-like domain found in Sinorhizobium meliloti Rm1021 ThuA (SmThuA) Back     alignment and domain information
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white Back     alignment and domain information
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF06283 ThuA: Trehalose utilisation; PDB: 4E5V_A 1T0B_A Back     alignment and domain information
>cd03143 A4_beta-galactosidase_middle_domain A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PF08532 Glyco_hydro_42M: Beta-galactosidase trimerisation domain; InterPro: IPR013738 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07090 DUF1355: Protein of unknown function (DUF1355); InterPro: IPR010768 This entry is found in several hypothetical bacterial proteins of around 250 residues in length Back     alignment and domain information
>PRK05568 flavodoxin; Provisional Back     alignment and domain information
>PF00630 Filamin: Filamin/ABP280 repeat; InterPro: IPR017868 The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod Back     alignment and domain information
>COG5426 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>PRK05569 flavodoxin; Provisional Back     alignment and domain information
>PF10634 Iron_transport: Fe2+ transport protein; InterPro: IPR018470 This is a bacterial family of periplasmic proteins that are thought to function in high-affinity Fe2+ transport Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 55.6 bits (133), Expect = 2e-08
 Identities = 38/292 (13%), Positives = 87/292 (29%), Gaps = 69/292 (23%)

Query: 141 MVIDHINYA--VSNFDGD-HTLIASDDFIKADVILGSKKIEAPVLFQGIGHSLNPANSLV 197
           +V+ ++  A   + F+     L+ +      D +  +      +    +  + +   SL+
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 198 LKVLSASSSAYSANPKSKLSNPPS-LTGS--AISLVSVVQARNNARILITGSLSMFSNRH 254
           LK L              L  P   LT +   +S+++       A            +  
Sbjct: 308 LKYLD--------CRPQDL--PREVLTTNPRRLSIIAESIRDGLATW----------DNW 347

Query: 255 EKSGNEQFLTEISKWVFHERGHLKAVNVRHHKVGESDEPAIYRINDDLEYSV-EIYEWSG 313
           +    ++  T I   +      L+    R       D  +++  +  +   +  +     
Sbjct: 348 KHVNCDKLTTIIESSL----NVLEPAEYRKM----FDRLSVFPPSAHIPTILLSLI---- 395

Query: 314 TSWEPYVSDDVQVQFYMMSPYVLKTLSTDQKGHYSAEFKVPDVYGVFQFKVEYQRLGYTS 373
             W   +  DV V   +++     +L   +K    +   +P +Y                
Sbjct: 396 --WFDVIKSDVMV---VVNKLHKYSLV--EKQPKESTISIPSIY---------------- 432

Query: 374 LSLSKQIPVRPYRH----NEYERFLPAAYPYYGSAFSMMAGFFIFTIV-HLY 420
           L L  ++      H    + Y   +P  +         +  +F   I  HL 
Sbjct: 433 LELKVKLENEYALHRSIVDHYN--IPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query422
3rht_A259 (gatase1)-like protein; structural genomics, PSI-b 97.98
2gk3_A256 Putative cytoplasmic protein; STM3548, structural 96.91
3soz_A248 ORF 245 protein, cytoplasmic protein STM1381; stru 95.42
1t0b_A252 THUA-like protein; trehalose metabolism, NCS symme 94.88
4e5v_A281 Putative THUA-like protein; THUA-like proteins, tr 94.33
2p9r_A102 Alpha-2-M, alpha-2-macroglobulin; human alpha2-mac 91.6
3f6r_A148 Flavodoxin; FMN binding, oxidized, electron transp 88.84
3nrp_A160 Periplasmic protein-probably involved in high-AFF 87.68
3fni_A159 Putative diflavin flavoprotein A 3; alpha-beta pro 87.62
2zuv_A759 Lacto-N-biose phosphorylase; beta-alpha-barrel, TI 86.92
2o6f_A189 34 kDa membrane antigen; IG-fold, syphilis, metal- 86.73
2fz5_A137 Flavodoxin; alpha/beta doubly-wound topology, non- 84.69
5nul_A138 Flavodoxin; electron transport, flavoprotein, FMN; 83.59
3hly_A161 Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein 82.87
1ydg_A211 Trp repressor binding protein WRBA; tetramer, stru 81.27
3ff4_A122 Uncharacterized protein; structural genomics, PSI- 80.89
3tty_A675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 80.07
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus} Back     alignment and structure
Probab=97.98  E-value=0.0001  Score=70.74  Aligned_cols=221  Identities=16%  Similarity=0.164  Sum_probs=120.5

Q ss_pred             CeEEEEEcCcccccchhHHHHHHHhCCceEEEeeCCCCCccccccCccccCEEEEeCCCCCCCCCCccHHHHHHHHHCCC
Q 014568           30 RRVLVLVDDFAIKSSHSLYFGSLTSRGFQLEFKLADDPNIGLQRYGQYLYDALVLFCPSVERFGGSIDVASIVDFVDSGH  109 (422)
Q Consensus        30 ~r~LVlld~~~~~~~~S~f~~~L~~rG~~v~~~~~~d~~l~L~~~g~~~yd~LVI~~p~~~~~~~~~e~~~L~~Fi~~GG  109 (422)
                      .|+|+| +++.....-..|.+.|++.||+|++..+.+-..  ....-..||.+|+.......++ ....+.|.+||++||
T Consensus         5 ~~vLiV-~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~--~~~~L~~yDvIIl~d~~~~~l~-~~~~~~L~~yV~~GG   80 (259)
T 3rht_A            5 TRVLYC-GDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLD--VGELLAKQDLVILSDYPAERMT-AQAIDQLVTMVKAGC   80 (259)
T ss_dssp             -CEEEE-ESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBC--SSHHHHTCSEEEEESCCGGGBC-HHHHHHHHHHHHTTC
T ss_pred             ceEEEE-CCCCchhHHHHHHHHHHhCCceEEEeccccccc--ChhHHhcCCEEEEcCCccccCC-HHHHHHHHHHHHhCC
Confidence            578887 665445555678889999999999975544311  1122367899999865554464 456789999999999


Q ss_pred             cEEEEeCCCCcH----HHH--HHHHHcCceecCCCCeEEEeccCccccCCCCCceEEeecccc--ccceeccCCccc--C
Q 014568          110 DLIVAADSNASD----LIR--EVATECGVDFDEDPAAMVIDHINYAVSNFDGDHTLIASDDFI--KADVILGSKKIE--A  179 (422)
Q Consensus       110 NlLi~~~~~~~~----~l~--~ll~elGI~~~~~~~~~VvD~f~~~~~~~~~~~~~iv~~~~i--~~~~i~~~~~~~--~  179 (422)
                      .+++++++..-.    ...  +|.+-+.+++.+. ...+ ++-.          ..+..+...  .+|+|+......  -
T Consensus        81 gLi~~gG~~s~~g~~g~~~~t~L~~vLPv~~~~~-~~rv-~~~~----------g~~~~~~~~~g~~HPIt~gl~~~~~~  148 (259)
T 3rht_A           81 GLVMLGGWESYHGLGGNWDQTLLAEVLPVDIKSA-DDRI-NFDQ----------PTLAIPAAINSVSHPILQNLPWEDRP  148 (259)
T ss_dssp             EEEEECSTTSSSTTTTCGGGSGGGGTSSEECCSS-CCEE-ECSS----------CEEEEESSGGGGGSTTTTTSCTTTCC
T ss_pred             eEEEecCccccccccCcccccchhhhCCcccccc-cccc-ccCC----------CccceeEEccCCCCccccCCCccccC
Confidence            999888764321    221  4666778877764 2323 2111          111111122  257776432211  1


Q ss_pred             ceeeeceeEEeecCCceeEeee--EeCCceeecCCCCCCCCCCCCCCCceeEEEEEEecCCcEEEEEeccc-------cc
Q 014568          180 PVLFQGIGHSLNPANSLVLKVL--SASSSAYSANPKSKLSNPPSLTGSAISLVSVVQARNNARILITGSLS-------MF  250 (422)
Q Consensus       180 ~vl~~g~g~~l~~~n~~~~pIL--~a~~tsys~~~~~~~~~~~~~~G~~~~LvaalQ~~nnaRvvvvGS~d-------~f  250 (422)
                      |.+ .+.-.... . +-...++  +...+.|+-...+.    .+ .+.......+++....+|++..+|-.       |.
T Consensus       149 p~~-~~~~~~~~-~-~~~~vl~~~t~~~p~~sg~~~~~----~~-~~~~~~PlL~~~~~GkGRV~~lasD~~~~W~~~~~  220 (259)
T 3rht_A          149 PTI-GGLNRIAA-K-AKAQTLLMARVWRPTFSLEHGKT----TW-EHADHHPLLVVGEAGTGRVAAFASDVAPHWVGGLV  220 (259)
T ss_dssp             CBC-SEEECCEE-C-TTSEEEEEEEEECCEEETTTTEE----EC-CEEEEEEEEEEEEETTEEEEEESSCSSTTTSGGGG
T ss_pred             Ccc-cceEEEEe-C-CCCeEEEeecccccccccccccc----cc-ccCCCceEEEEeccCCeEEEEEeCCCCcccccccc
Confidence            211 11111111 1 2123333  32334555332111    11 11122355667778999999998642       11


Q ss_pred             c--Ccc------------CccchHHHHHHHhhcccccC
Q 014568          251 S--NRH------------EKSGNEQFLTEISKWVFHER  274 (422)
Q Consensus       251 S--d~~------------~~~~N~~f~~~l~~W~f~e~  274 (422)
                      .  ++.            ....-.+|..+++.|+.+|.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~  258 (259)
T 3rht_A          221 DWGDERVTSQAPGAGAIEVGNLYSQFFRQMLEWVAKST  258 (259)
T ss_dssp             GCSSSEEEECCTTSCCEEEEHHHHHHHHHHHHHHHTC-
T ss_pred             ccccccccccccccccccCCCHHHHHHHHHHHHHhhcc
Confidence            1  000            01245679999999999875
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9 Back     alignment and structure
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp} Back     alignment and structure
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6 Back     alignment and structure
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae} Back     alignment and structure
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens} Back     alignment and structure
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A* Back     alignment and structure
>3nrp_A Periplasmic protein-probably involved in high-AFF transport; immunoglobulin-like fold, iron transporter, copper binding; 1.60A {Escherichia coli} PDB: 3nrq_A Back     alignment and structure
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A Back     alignment and structure
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A* Back     alignment and structure
>2o6f_A 34 kDa membrane antigen; IG-fold, syphilis, metal-ION binding, dimer, membrane protei protein binding; 1.63A {Treponema pallidum} PDB: 2o6d_A 2o6e_A 2o6c_A Back     alignment and structure
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1 Back     alignment and structure
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A* Back     alignment and structure
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301} Back     alignment and structure
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A* Back     alignment and structure
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query422
d2gk3a1246 Putative cytoplasmic protein STM3548 {Salmonella t 97.44
d1t0ba_240 GK2113 homologue {Bacillus stearothermophilus [Tax 93.95
d1ycga1149 Nitric oxide reductase C-terminal domain {Moorella 91.16
d1e5da1152 Rubredoxin oxygen:oxidoreductase (ROO), C-terminal 89.49
d1oi4a1170 Hypothetical protein YhbO {Escherichia coli [TaxId 86.23
d2qwxa1230 Quinone reductase type 2 (menadione reductase) {Hu 84.14
d1vmea1148 ROO-like flavoprotein TM0755, C-terminal domain {T 83.85
d1kwga3197 A4 beta-galactosidase middle domain {Thermus therm 83.75
d1y81a1116 Hypothetical protein PF0725 {Pyrococcus furiosus [ 82.69
d1u9ca_221 GK2698 ortholog {Bacillus stearothermophilus [TaxI 81.37
d1g2ia_166 Intracellular protease {Archaeon Pyrococcus horiko 80.53
>d2gk3a1 c.23.16.9 (A:8-253) Putative cytoplasmic protein STM3548 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: STM3548-like
domain: Putative cytoplasmic protein STM3548
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.44  E-value=0.00013  Score=66.96  Aligned_cols=72  Identities=15%  Similarity=0.204  Sum_probs=48.3

Q ss_pred             hHHHHHHHhCCceEEEeeCCCC--CccccccCccccCEEEEeCCCCCC------------CCCCccHHHHHHHHHCCCcE
Q 014568           46 SLYFGSLTSRGFQLEFKLADDP--NIGLQRYGQYLYDALVLFCPSVER------------FGGSIDVASIVDFVDSGHDL  111 (422)
Q Consensus        46 S~f~~~L~~rG~~v~~~~~~d~--~l~L~~~g~~~yd~LVI~~p~~~~------------~~~~~e~~~L~~Fi~~GGNl  111 (422)
                      ..+.+.|++.|++|++....+.  ..-...++-..||.|||.+...+.            ++ ....+.|.+||++||-+
T Consensus        33 ~~l~~aL~~~~~~v~~~~~~~~~~~fP~~~~~l~~yDvvIl~D~~a~~~~~~~~~~~~~~~~-p~ql~~L~~fV~~GGGL  111 (246)
T d2gk3a1          33 TWLLECLRKGGVDIDYMPAHTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIK-PNALESIKEYVKNGGGL  111 (246)
T ss_dssp             HHHHHHHHHTTCEEEEECHHHHHHCCCCSHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCC-CCHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHhCCceEEEecchhhhhhCccCHHHHhcCCEEEEecCchhhcccCcchhhcccCC-HHHHHHHHHHHHhCCCE
Confidence            3589999999999999632221  011112223678999998755422            22 23568999999999999


Q ss_pred             EEEeCCC
Q 014568          112 IVAADSN  118 (422)
Q Consensus       112 Li~~~~~  118 (422)
                      ++++++.
T Consensus       112 i~igG~~  118 (246)
T d2gk3a1         112 LMIGGYL  118 (246)
T ss_dssp             EEECSTT
T ss_pred             EEecCcc
Confidence            9887653
>d1t0ba_ c.23.16.6 (A:) GK2113 homologue {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione reductase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1kwga3 c.23.16.5 (A:394-590) A4 beta-galactosidase middle domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure